v2025.03

@koopmant

What's Changed

Create auto-refreshing incomplete jobs table by @koopmant in #3684
Add latest version for GCAPI by @chrisvanrun in #3686
Auto refresh status badge cleanup by @koopmant in #3688
Create auto refresh badge for import and build status by @koopmant in #3679
Remember FlexibleImageWidget choice on form redisplay by @ammar257ammar in #3681
Update dependencies by @github-actions in #3693
Apply full page widget to blogs by @chrisvanrun in #3691
Add Newick tree support by @chrisvanrun in #3695
Update challenge cost calculation by @amickan in #3696
Update dependencies by @github-actions in #3702
Vendor django rest knox by @jmsmkn in #3706
Fix relying on implicit ordering of Notification in test by @chrisvanrun in #3707
Improve knox by @jmsmkn in #3709
Revert denying all files if allowed_file_types is undefined by @jmsmkn in #3712
Move add and update buttons for flatpages to separate row by @amickan in #3710
Adjustable gpu types by @koopmant in #3699
Dynamic examples for view content field help text by @ammar257ammar in #3697
Update dependencies by @github-actions in #3718
Handle json memory error by @jmsmkn in #3717
Process Newick files on acks-late-2xlarge by @chrisvanrun in #3713
Flexible documentation link in view_content help text by @ammar257ammar in #3723
Add example to overlay_segments help text by @ammar257ammar in #3716
Fix PUT for ArchiveItem/DisplaySet by @chrisvanrun in #3703
Include hanging protocols check in view_content_example generation by @ammar257ammar in #3722
Adjustable gpu types for algorithms by @koopmant in #3714
Support Biological Observation Matrix (BIOM) files by @chrisvanrun in #3715
Update dependencies by @github-actions in #3726
Update JSONEditorWidget to 10.1.1 by @chrisvanrun in #3728
Job requirement options from organizations by @koopmant in #3725
Rename interfaces property to avoid clash with AlgorithmInterface by @amickan in #3733
Update budget based on gpu type and memory by @koopmant in #3731
Retain current selection of gpu type choice and allow challenge admins to update gpu types by @koopmant in #3734
Replace responsive DataTables behaviour with floating scrolling bar by @chrisvanrun in #3729
Fix error parsing by @jmsmkn in #3736
Update dependencies by @github-actions in #3739
Correct challenge request defaults by @jmsmkn in #3737
Upgrade Datatables by @chrisvanrun in #3738
Fix not sourcing initial value for JSONEditor field by @chrisvanrun in #3741
Fix Hanging Protocols json field raised exception by @ammar257ammar in #3727
Fix Datatables initialization issues by @chrisvanrun in #3746
Fix inline JS by @jmsmkn in #3749
Removes oninput for challenge request form by @jmsmkn in #3751
Remove headline from documentation search results by @ammar257ammar in #3755
Adjust quote styling by @koopmant in #3752
Pin pycurl by @jmsmkn in #3756
Update dependencies by @github-actions in #3757
Fix several issues with Datatables by @chrisvanrun in #3750
Subclass AccessMixin directly in VerificationRequiredMixin by @amickan in #3758
Replace deprecated strtobool function by @koopmant in #3760
Use fullpage markdown widget for documentation pages by @koopmant in #3762
Remove budget_for_hosting_challenge field by @amickan in #3763
Fix incorrectly defined table data when there are no evaluations by @chrisvanrun in #3771
Update dependencies by @github-actions in #3766
Fix container builds by @jmsmkn in #3772
Update dependencies by @jmsmkn in #3773
Tweak image upload help text by @chrisvanrun in #3774
Delete user upload after creating civ for file by @ammar257ammar in #3761
Fix buggy code blocks in markdown renderer by @chrisvanrun in #3764
Remove verification required mixin from some algorithm views by @ammar257ammar in #3776
Budget alerts by @koopmant in #3747
Add unique constraints to through tables by @jmsmkn in #3777
Reduce lock durations by @jmsmkn in #3779
Fix Phase lookups by @jmsmkn in #3781
Add option to skip calculating ranks by @jmsmkn in #3783
Apply ordering of CIVs to API serializations by @chrisvanrun in #3768
Reset start time, end time and error message on job requeue from admin by @ammar257ammar in #3782
Preview emails using the full page editor and standard email rendering by @jmsmkn in #3778
Update dependencies by @github-actions in #3784
Unmix presentation and content for docpages by @koopmant in #3786
Exclude images used by running evaluations and jobs from periodic container removal by @ammar257ammar in #3788
Update dependencies by @github-actions in #3792
Exclude slugs from historical records by @jmsmkn in #3793
Add slug ordering to sorting civs by @chrisvanrun in #3790
[Onboarding Tasks] model and admin by @chrisvanrun in #3795
Separate algorithm usage information from details page by @ammar257ammar in #3791
Fix small issues on Joblist by @chrisvanrun in #3767
Update dependencies by @github-actions in #3801
Use title instead of slug for label interface widgets by @chrisvanrun in #3808
Cleanup flexible image adjustments by @koopmant in #3806
Update dependencies by @github-actions in #3815
Onboarding Tasks views by @chrisvanrun in #3814
Flexible file widget by @koopmant in #3807
Add html user completion for challenge admin users by @chrisvanrun in #3817
Parent object layer for flexible file by @koopmant in #3821
Add ENV variable to limit concurrent API requests by workstation sessions by @HarmvZ in #3819
Update dependencies by @github-actions in #3825
Update dependencies by @github-actions in #3829
Add production danger theme by @chrisvanrun in #3828
Integrate flexible file widget by @koopmant in #3824
Onboarding tasks emails by @chrisvanrun in #3822
Add evaluation error message to evaluation details view by @ammar257ammar in #3826
Update dependencies by @github-actions in #3837
Add application for .well-known urls by @jmsmkn in #3836
Onboarding Tasks Creation by @chrisvanrun in #3834
Only send reviewer email to those with object permissions by @jmsmkn in #3839
Adds algorithm create redirect view by @jmsmkn in #3841
Move supplementary evaluation files to protected storage by @jmsmkn in #3843
Remove uses_markdown option by @jmsmkn in #3844
Remove the extra column of error messages by @jmsmkn in #3848
Update dependencies by @github-actions in #3849
Fix jsoneditor schema by @chrisvanrun in #3813
Apply server-side pagination to All Submissions page by @ammar257ammar in #3835
Fix canceling jobs in admin by @jmsmkn in #3851
Split off the Ground Truth page by @chrisvanrun in #3853
Also hide statistics for non-educational reader studies by @chrisvanrun in #3858
Cleanup flexible widget by @koopmant in #3833
Change overflow of register form to avoid showing scroll bars by @ammar257ammar in #3860
Add postpaid invoices by @koopmant in #3855
Update dependencies by @github-actions in #3862
Optional inputs by @amickan in #3842
Add pagination to hanging protocol list page by @ammar257ammar in #3840
Set time limit, gpu type and memory for external evaluations by @amickan in #3864
Clear existing phase inputs by @amickan in #3865
Update serializers.py by @jmsmkn in #3867
Remove results template by @jmsmkn in #3868
Remove metric_template from overlay_segments by @jmsmkn in #3869
Unify usage of NON_ALGORITHM_INTERFACES by @jmsmkn in #3870
Add phase interface configuration links to challenge admin by @amickan in #3872
Fix admin page OnboardingTask by @chrisvanrun in #3873
Ensure labels are only text by @jmsmkn in #3875
Update dependencies by @github-actions in #3880
Lock interfaces of parent and child phases by @amickan in #3874
Fix numberical slugs breaking collapsables by @chrisvanrun in #3883
Ground Truth csv form seperation by @chrisvanrun in #3879
Add ALGORITHMS_MAX_ACTIVE_JOBS_PER_ALGORITHM by @jmsmkn in #3882
Add border to user profile image by @ammar257ammar in #3881
Fix flaky test for default onboarding tasks by @koopmant in #3886
Remove test setting by @jmsmkn in #3887
Give challenge admins view invoice permission by @koopmant in #3885
Remove long term commitment by @jmsmkn in #3888
Remove archive algorithm link by @jmsmkn in #3891
Remove archive item job list by @jmsmkn in #3893
Always invoke component jobs using the invocations file by @jmsmkn in #3904
Fix flaky test due to existing browser sessions by @koopmant in #3897
Add inputs.json by @jmsmkn in #3905
Invoice email alerts by @koopmant in #3861
Set MetadataDirective to REPLACE by @jmsmkn in #3909
Migrate from poetry to uv by @jmsmkn in #3895
Add invoice overview by @koopmant in #3906
Ground truth copy from answers by @chrisvanrun in #3884
Update dependencies by @github-actions in #3915

Full Changelog: v2024.11...v2025.03

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v2025.03

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