CN101622348A - 作为治疗性干预靶标的miR-20调节的基因和途径 - Google Patents
作为治疗性干预靶标的miR-20调节的基因和途径 Download PDFInfo
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Abstract
本发明涉及用于鉴定被miR-20a调节的基因或者基因途径,使用miR-20a调节基因或者基因途径,使用该谱评估患者状况和/或用适当miRNA治疗患者的方法和组合物。
Description
发明背景
I.技术领域
本发明涉及分子生物学和医学领域。更加具体而言,本发明涉及用于治疗受miR-20微RNA、微RNA表达以及通过它们直接和间接调节的基因和细胞途径影响的疾病或状况的方法。
II.背景技术
在2001年,几个小组使用克隆方法从线虫(C.elegans)、果蝇和人中分离和鉴定了一大群“微RNA”(miRNA)(Lagos-Quintana等,2001;Lau等,2001;Lee和Ambrmbros,2001)。已经在植物和包括人在内的动物中鉴定出几百种miRNA,它们似乎不具有内源siRNA。因此,虽然miRNA与siRNA类似,但是miRNA是不同的。
迄今观察到的miRNA长度有大约21-22个核苷酸,并且它们来源于从非蛋白编码基因转录的更长的前体。参见综述Carrington等(2003)。前体形成在自身互补区折回的结构;然后它们被核酸酶切酶(在动物中)或DCL1(在植物中)加工产生短的双链miRNA。miRNA链之一掺入到称作RNA诱导沉默复合体(RISC)的蛋白质和miRNA的复合体中。miRNA将RISC复合体导向至靶mRNA,然后依赖于miRNA与其靶mRNA的序列互补程度将其断裂或者发生翻译沉默。当前,据信完全或近乎完全的互补性导致mRNA降解,这如在植物中最普遍观察到的那样。相反,如主要在动物中发现的那样,不完全的碱基配对导致翻译沉默。然而,最近的资料表明了额外复杂性(Bagga等,2005;Lim等,2005),并且miRNA导致基因沉默的机制仍处于紧张研究中。
许多miRNA在不同生物体中是保守的,并且这表明miRNA参与有机体整个生存期必需的生物学过程(Esquela-Kerscher和Slack,2006)。具体而言,miRNA涉及调节细胞生长和细胞与组织分化,这是与癌症发展相关的细胞过程。例如,在线虫发育过程中,lin-4和let-7均调节从一个幼虫期到另一个幼虫期(Ambros,2001)的传代。Mir-14和bantam是调节细胞死亡的果蝇(Drosphila)miRNA,该调节似乎是通过调节细胞凋亡所涉及的基因的表达进行(Brennecke等,2003,Xu等,2003)。
关于微RNA的研究逐渐增加,因为科学家开始意识到这些分子在调节真核基因表达中起着广泛的作用。具体而言,几项最新研究已经表明,众多miRNA的表达水平与各种癌症相关(在Esquela-Kerscher和Slack,2006;Calin和Croce,2006中综述)。已经观察到了几乎所有miRNA在众多癌症类型中差异表达(Lu等,2005)。大多数此类研究仅仅通过间接证据将miRNA与癌症关联。然而,He等(2005a)已经提供了miRNA可直接致癌的更直接证据,即通过迫使包括miR-20a在内的六种miRNA在小鼠中过表达导致B细胞淋巴瘤明显增加。
发明人先前证明,hsa-miR-20a参与众多细胞活性的调节,这些细胞活性代表着癌症治疗和其他疾病和紊乱治疗的干预点(2005年5月31日提出的美国专利申请序列号11/141,707和2005年11月14日提出的序列号11/273,640,两个专利申请通过参考并入本文)。miR-20a过表达明显降低衍生自白血病外周血的人T细胞系Jurkat细胞的活力,而明显提高人正常原代T细胞的活力和增殖。提高正常细胞活力而降低癌细胞活力的细胞调节物代表着对癌症有用的治疗性治疗。Hsa-miR-20a增加A549肺癌细胞的细胞凋亡(诱导具有致癌潜能的细胞的死亡)并且增加BJ细胞的细胞周期S期细胞百分数(人包皮原代细胞)而同时降低这些细胞的细胞周期G1期细胞百分数。发明人观察到,hsa-miR-20a在来自慢性淋巴细胞白血病患者的白细胞中的表达高于来自正常患者的相同细胞中的表达。其他人已经表明,hsa-miR-20a调节转录因子E2F1的翻译产率(O’Donnell等,2005)并且表现出在结肠、胰腺和前列腺肿瘤中过表达的,而在乳癌癌中被下调(Volinia等,2006)。
生物信息学分析表明,任何特定miRNA可结合并改变多达几百个不同基因的表达。此外,一个基因可以被几个miRNA调节。因此,每一miRNA可调节基因、基因途径和基因网络间的复杂相互作用。这种牵涉miRNA的调节途径和网络的误调节或改变有可能促成紊乱和疾病,如癌症的发展。虽然生物信息学工具有助于预测miRNA结合靶,但它有局限性。因为miRNA与其靶结合位点的不完全互补性,仅使用生物信息学工具很难精确预测miRNA的mRNA靶。此外,miRNA与靶基因之间的复杂相互调节网路使得很难精确预测那些基因实际上响应特定miRNA而被误调节。
通过操纵miRNA表达或者通过修复miRNA误调节校正基因表达错误或调节基因表达代表着修复遗传病和治疗疾病,如癌症的有前景的方法。如上所述,当前该方法的缺陷是任何特定miRNA所影响的调节途径和网络的细节仍然普遍地未经鉴定。除了E2F1之外,癌细胞中被miR-20调节的基因、基因途径和基因网路仍然大部分未知。当前,这代表着对miR-20可能在其中起作用的癌症治疗的重要限制。需要鉴定hsa-miR-20表达所调节的或者调节hsa-miR-20表达的基因、基因途径和基因网络。
发明内容
本发明通过在miR-20介导改变另外的一个或多个基因表达之后鉴定miR-20调节的直接靶标基因或者调节的间接或下游靶标基因,提供额外的组合物和方法。此外,发明描述了被miR-20及其家族成员影响的基因、疾病和/或生理途径和网络。在某些方面,本发明组合物向患有、怀疑患有或者有危险发展成代谢性、免疫性、传染性、心血管、消化性、内分泌、眼、泌尿生殖、血液、肌肉骨骼、神经系统、先天性、呼吸、皮肤或癌性疾病或状况的受试者施用。
在特定方面,可以基于一个或一个以上miRNA或mRNA表达和/或异常表达选择用于治疗的受试者或者患者。在进一步的方面中,可以基于一个或一个以上生物或生理途径的异常,包括与途径相关的一个或一个以上基因的异常表达、或者与途径相关的一个或一个以上基因所编码一个或一个以上蛋白质的异常表达选择用于治疗的受试者或者患者。在仍进一步的方面中,可以基于miRNA表达或生物或生理途径异常两者选择受试者或者患者。可以基于对miRNA或mRNA表达或其缺乏的评定和/或分析,评估受试者对治疗或者治疗方案的敏感性、抗性和/或疗效。可以在向受试者或者患者施用一种治疗之前、之中或之后评估受试者对该治疗的可治疗性。有代表性地,评定或评估可以通过分析miRNA和/或mRNA,联合其他评估方法,包括但不限于组织学、免疫组织化学、血液学工作等开展。
在一些实施方案中,传染性疾病或状况包括细菌、病毒、寄生虫或真菌感染。这些基因和途径中许多与多种癌症和其他疾病相关。癌性状况包括,但不限于星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、脂肪瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、肺癌、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌、尿路上皮癌,其中对一个或一个以上基因的调节足以引起治疗反应。有代表性地,癌性状况是与不受控生长或不经历细胞死亡,包括细胞凋亡相关的异常高增生性状况。
细胞中miR-20表达或功能的改变将导致这些关键基因表达的改变并促成了疾病或其他状况的发展。向疾病细胞或者组织或受试者中引入miR-20(用于其中miRNA被下调的疾病)或miR-20抑制剂(用于其中miRNA被上调的疾病)将产生治疗反应。本文提供了对受miR-20直接或间接调节的关键基因和与其相关的疾病的鉴定。在某些方面,细胞可以是上皮细胞、基质细胞或黏膜细胞。细胞可以是,但不限于脑细胞、神经元细胞、血液细胞、食管细胞、肺细胞、心血管细胞、肝细胞、乳腺细胞、骨细胞、甲状腺细胞、腺细胞、肾上腺细胞、胰细胞、胃细胞、肠细胞、肾细胞、膀胱细胞、前列腺细胞、子宫细胞、卵巢细胞、睾丸细胞、脾细胞、皮肤细胞、平滑肌细胞、心肌或横纹肌细胞。在某些方面,细胞、组织或靶标不应是miRNA表达缺陷性的,然而可以仍然治疗性响应miRNA的表达或过表达。miR-20可以用作任何这些疾病的治疗靶标。
细胞、组织或者受试者可以是癌症细胞、癌性组织、潜伏癌性组织,或者可以是诊断患有或者有危险发展成疾病或状况的受试者或者患者。在某些方面,癌症细胞是神经元细胞、神经胶质细胞、肺细胞、肝细胞、脑细胞、乳腺细胞、膀胱细胞、血液细胞、白血病细胞、结肠细胞、子宫内膜细胞、胃细胞、皮肤细胞、卵巢细胞、脂肪细胞、骨细胞、宫颈细胞、食管细胞、胰细胞、前列腺细胞、肾细胞或甲状腺细胞。在仍进一步的方面中,癌症包括,但不限于星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、脂肪瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、肺癌、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌、尿路上皮癌。
本发明实施方案包括调节细胞、组织或受试者中基因表达或生物或生理途径的方法,包括向细胞、组织或者受试者施用一定量分离的核酸或其模拟物,所述一定量分离的核酸或其模拟物包含足以调节受miR-20miRNA调节的一个或多个基因表达的miR-20核酸序列。“miR-20核酸序列”包括miR-20和本文所述相关序列的全长前体或加工的(即成熟的)序列,以及前体miRNA或其加工序列的5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29或更多个核苷酸,包括所有范围和它们之间的整数。在某些实施方案中,miR-20核酸序列包含全长加工miRNA序列并且被称为“miR-20全长加工核酸序列”。在仍进一步的方面中,miR-20核酸包含与SEQID NO:1至SEQ ID NO:269具有至少75、80、85、90、95、98、99或100%同源性的miR-20的至少5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25或50个核苷酸(包括所有范围和它们之间的整数)片段。在某些方面,会使用包括一些但并非全部所列miR-20家族成员的miRNA亚组。可以预期到的是一个或一个以上miR-20家族成员或miR-20miRNA会明确排除在本发明某些实施方案之外例如,在一个实施方案,仅包含SEQ IDNO:269的共有序列的序列包含在内,而所有其他miRNA排除在外。通用术语miR-20包括miR-20家族所有成员。miR-20家族的成熟序列包括hsa-miR-20a(MIMAT0000075,SEQ ID NO:1)、hsa-miR-20b(MIMAT0001413,SEQ ID NO:2)、age-miR-20(MIMAT0002676,SEQ ID NO:3)、bta-miR-20a(MIMAT0003527,SEQ ID NO:4)、bta-miR-20b(MIMAT0003796,SEQ ID NO:5)、dre-miR-20a(MIMAT0001786,SEQ ID NO:6)、dre-miR-20a*(MIMAT0003400,SEQ ID NO:7)、dre-miR-20b(MIMAT0001778,SEQ ID NO:8)、fru-miR-20(MIMAT0003083,SEQID NO:9)、gga-miR-20a(MIMAT0001111,SEQ ID NO:10)、gga-miR-20b(MIMAT0001411,SEQ ID NO:11)、ggo-miR-20(MIMAT0002662,SEQ IDNO:12)、lca-miR-20(MIMAT0002669,SEQ ID NO:13)、lla-miR-20(MIMAT0002718,SEQ ID NO:14)、mdo-miR-20(MIMAT0004169,SEQ IDNO:15)、mml-miR-20(MIMAT0002704,SEQ ID NO:16)、mmu-miR-20a(MIMAT0000529,SEQ ID NO:17)、mmu-miR-20b(MIMAT0003187,SEQ IDNO:18)、mne-miR-20(MIMAT0002725,SEQ ID NO:19)、ppa-miR-20(MIMAT0002683,SEQ ID NO:20)、ppy-miR-20(MIMAT0002690,SEQ IDNO:21)、ptr-miR-20(MIMAT0002697,SEQ ID NO:22)、rno-miR-20a(MIMAT0000602,SEQ ID NO:23)、rno-miR-20a*(MIMAT0000603,SEQ IDNO:24)、rno-miR-20b(MIMAT0003211,SEQ ID NO:25)、rno-miR-20b*(MIMAT0003212,SEQ ID NO:26)、sla-miR-20(MIMAT0002711,SEQ ID NO:27)、ssc-miR-20(MIMAT0002129,SEQ ID NO:28)、tni-miR-20(MIMAT0003084,SEQID NO:29)、xla-miR-20(MIMAT0001348,SEQ ID NO:30)、xtr-miR-20a(MIMAT0003669,SEQ ID NO:31)、xtr-miR-20a*(MIMAT0003670,SEQ ID NO:32)和/或xtr-miR-20b(MIMAT0003707,SEQ ID NO:33)。
miR-20家族的其他成员,如Sanger数据库所指定,包括age-miR-106a(MIMAT0002796,SEQ ID NO:63)、age-miR-106b(MIMAT0002761 SEQ IDNO:64)、age-miR-17-3p(MIMAT0002673 SEQ ID NO:65)、age-miR-17-5p(MIMAT0002672 SEQ ID NO:66)、age-miR-18(MIMAT0002674 SEQ ID NO:67)、age-miR-93(MIMAT0002762 SEQ ID NO:68)、bta-miR-106(MIMAT0003784 SEQID NO:69)、bta-miR-17-3p(MIMAT0003816 SEQ ID NO:70)、bta-miR-17-5p(MIMAT0003815 SEQ ID NO:71)、bta-miR-18a(MIMAT0003526 SEQ ID NO:72)、bta-miR-18b(MIMAT0003517 SEQ ID NO:73)、bta-miR-93(MIMAT0003837 SEQID NO:74)、dre-miR-17a(MIMAT0001777 SEQ ID NO:75)、dre-miR-17a*(MIMAT0003396 SEQ ID NO:76)、dre-miR-18a(MIMAT0001779 SEQ ID NO:77)、dre-miR-18b(MIMAT0001780 SEQ ID NO:78)、dre-miR-18b*(MIMAT0003397SEQ ID NO:79)、dre-miR-18c(MIMAT0001781 SEQ ID NO:80)、dre-miR-93(MIMAT0001810 SEQ ID NO:81)、fru-miR-17(MIMAT0002916 SEQ ID NO:82)、fru-miR-18(MIMAT0002918 SEQ ID NO:83)、gga-miR-106(MIMAT0001142 SEQID NO:84)、gga-miR-17-3p(MIMAT0001115 SEQ ID NO:85)、gga-miR-17-5p(MIMAT0001114 SEQ ID NO:86)、gga-miR-18a(MIMAT0001113 SEQ IDNO:87)、gga-miR-18b(MIMAT0001141 SEQ ID NO:88)、ggo-miR-106a(MIMAT0002795 SEQ ID NO:89)、ggo-miR-106b(MIMAT0002758 SEQ IDNO:90)、ggo-miR-17-3p(MIMAT0002659 SEQ ID NO:91)、ggo-miR-17-5p(MIMAT0002658 SEQ ID NO:92)、ggo-miR-18(MIMAT0002660 SEQ ID NO:93)、ggo-miR-93(MIMAT0002759 SEQ ID NO:94)、hsa-miR-106a(MIMAT0000103SEQ ID NO:95)、hsa-miR-106b(MIMAT0000680 SEQ ID NO:96)、hsa-miR-17-3p(MIMAT0000071 SEQ ID NO:97)、hsa-miR-17-5p(MIMAT0000070 SEQ IDNO:98)、hsa-miR-18a(MIMAT0000072 SEQ ID NO:99)、hsa-miR-18a*(MIMAT0002891 SEQ ID NO:100)、hsa-miR-18b(MIMAT0001412 SEQ IDNO:101)、hsa-miR-93(MIMAT0000093 SEQ ID NO:102)、lca-miR-17-3p(MIMAT0002666 SEQ ID NO:103)、lca-miR-17-5p(MIMAT0002665 SEQ IDNO:104)、lca-miR-18(MIMAT0002667 SEQ ID NO:105)、lla-miR-106b(MIMAT0002777 SEQ ID NO:106)、lla-miR-17-3p(MIMAT0002715 SEQ IDNO:107)、lla-miR-17-5p(MIMAT0002714 SEQ ID NO:108)、lla-miR-18(MIMAT0002716 SEQ ID NO:109)、lla-miR-93(MIMAT0002778 SEQ IDNO:110)、mdo-miR-17-3p(MIMAT0004166 SEQ ID NO:111)、mdo-miR-17-5p(MIMAT0004165 SEQ ID NO:112)、mdo-miR-18(MIMAT0004167 SEQ IDNO:113)、mdo-miR-93(MIMAT0004178 SEQ ID NO:114)、mml-miR-106a(MIMAT0002798 SEQ ID NO:115)、mml-miR-106b(MIMAT0002772 SEQ IDNO:116)、mml-miR-17-3p(MIMAT0002701 SEQ ID NO:117)、mml-miR-17-5p(MIMAT0002700 SEQ ID NO:118)、mml-miR-18(MIMAT0002702 SEQ IDNO:119)、mml-miR-93(MIMAT0002773 SEQ ID NO:120)、mmu-miR-106a(MIMAT0000385 SEQ ID NO:121)、mmu-miR-106b(MIMAT0000386 SEQ IDNO:122)、mmu-miR-17-3p(MIMAT0000650 SEQ ID NO:123)、mmu-miR-17-5p(MIMAT0000649 SEQ ID NO:124)、mmu-miR-18(MIMAT0000528 SEQ IDNO:125)、mmu-miR-93(MIMAT0000540 SEQ ID NO:126)、mne-miR-106a(MIMAT0002802 SEQ ID NO:127)、mne-miR-106b(MIMAT0002780 SEQ IDNO:128)、mne-miR-17-3p(MIMAT0002722 SEQ ID NO:129)、mne-miR-17-5p(MIMAT0002721 SEQ ID NO:130)、mne-miR-18(MIMAT0002723 SEQ IDNO:131)、mne-miR-93(MIMAT0002781 SEQ ID NO:132)、ppa-miR-106a(MIMAT0002797 SEQ ID NO:133)、ppa-miR-106b(MIMAT0002763SEQ IDNO:134)、ppa-miR-17-3p(MIMAT0002680 SEQ ID NO:135)、ppa-miR-17-5p(MIMAT0002679 SEQ ID NO:136)、ppa-miR-18(MIMAT0002681 SEQ IDNO:137)、ppa-miR-93(MIMAT0002764 SEQ ID NO:138)、ppy-miR-106a(MIMAT0002799 SEQ ID NO:139)、ppy-miR-106b(MIMAT0002766 SEQ IDNO:140)、ppy-miR-17-3p(MIMAT0002687 SEQ ID NO:141)、ppy-miR-17-5p(MIMAT0002686 SEQ ID NO:142)、ppy-miR-18(MIMAT0002688 SEQ IDNO:143)、ppy-miR-93(MIMAT0002767 SEQ ID NO:144)、ptr-miR-106a(MIMAT0002800 SEQ ID NO:145)、ptr-miR-106b(MIMAT0002769 SEQ IDNO:146)、ptr-miR-17-3p(MIMAT0002694 SEQ ID NO:147)、ptr-miR-17-5p(MIMAT0002693 SEQ ID NO:148)、ptr-miR-18(MIMAT0002695 SEQ IDNO:149)、ptr-miR-93(MIMAT0002770 SEQ ID NO:150)、rno-miR-106b(MIMAT0000825 SEQ ID NO:151)、rno-miR-17(MIMAT0000786 SEQ IDNO:152)、rno-miR-18(MIMAT0000787 SEQ ID NO:153)、rno-miR-93(MIMAT0000817 SEQ ID NO:154)、sla-miR-106a(MIMAT0002801 SEQ IDNO:155)、sla-miR-106b(MIMAT0002775 SEQ ID NO:156)、sla-miR-17-3p(MIMAT0002708 SEQ ID NO:157)、sla-miR-17-5p(MIMAT0002707 SEQ IDNO:158)、sla-miR-18(MIMAT0002709 SEQ ID NO:159)、sla-miR-93(MIMAT0002776 SEQ ID NO:160)、ssc-miR-106a(MIMAT0002118 SEQ IDNO:161)、ssc-miR-18(MIMAT0002161 SEQ ID NO:162)、tni-miR-17(MIMAT0002917 SEQ ID NO:163)、tni-miR-18(MIMAT0002919 SEQ IDNO:164)、xla-miR-18(MIMAT0001349 SEQ ID NO:165)、xla-miR-20(MIMAT0001348 SEQ ID NO:166)、xtr-miR-106(MIMAT0003583 SEQ IDNO:167)、xtr-miR-17-3p(MIMAT0003565 SEQ ID NO:168)、xtr-miR-17-5p(MIMAT0003564 SEQ ID NO:169)、xtr-miR-18a(MIMAT0003652 SEQ IDNO:170)、xtr-miR-18b(MIMAT0003706 SEQ ID NO:171)、xtr-miR-93a(MIMAT0003659 SEQ ID NO:172)、xtr-miR-93b(MIMAT0003660 SEQ IDNO:173)。
miR-20家族成员的茎-环序列包括hsa-mir-20a(MI0000076,SEQ ID NO:34)、hsa-mir-20b(MI0001519,SEQ ID NO:35)、age-mir-20,(MI0002980 SEQ IDNO:36)、bta-mir-20a(MI0004741 SEQ ID NO:37)、bta-mir-20b,(MI0005015 SEQID NO:38)、dre-mir-20a(MI0001907 SEQ ID NO:39)、dre-mir-20b(MI0001899SEQ ID NO:40)、fru-mir-20(MI0003443 SEQ ID NO:41)、gga-mir-20a(MI0001181SEQ ID NO:42)、gga-mir-20b(MI0001517 SEQ ID NO:43)、ggo-mir-20(MI0002968SEQ ID NO:44)、lca-mir-20(MI0002974 SEQ ID NO:45)、lla-mir-20(MI0003016SEQ ID NO:46)、mdo-mir-20(MI0005357 SEQ ID NO:47)、mml-mir-20(MI0003004 SEQ ID NO:48)、mmu-mir-20a(MI0000568 SEQ ID NO:49)、mmu-mir-20b(MI0003536 SEQ ID NO:50)、mne-mir-20(MI0003022 SEQ IDNO:51)、ppa-mir-20(MI0002986 SEQ ID NO:52)、ppy-mir-20(MI0002992 SEQ IDNO:53)、ptr-mir-20(MI0002998 SEQ ID NO:54)、rno-mir-20a(MI0000638 SEQ IDNO:55)、rno-mir-20b(MI0003554 SEQ ID NO:56)、sla-mir-20(MI0003010 SEQ IDNO:57)、ssc-mir-20(MI0002423 SEQ ID NO:58)、tni-mir-20(MI0003444 SEQ IDNO:59)、xla-mir-20(MI0001453 SEQ ID NO:60)、xtr-mir-20a(MI0004911 SEQ IDNO:61)、和xtr-mir-20b(MI0004961 SEQ ID NO:62)。
在更多方面,miR-20家族包括的茎-环序列被称为age-mir-106a(MI0003099SEQ ID NO:174)、age-mir-106b(MI0003062 SEQ ID NO:175)、age-mir-17(MI0002977 SEQ ID NO:176)、age-mir-18(MI0002978 SEQ ID NO:177)、age-mir-93(MI0003063 SEQ ID NO:178)、bta-mir-106(MI0005005 SEQ IDNO:179)、bta-mir-17(MI0005031 SEQ ID NO:180)、bta-mir-18a(MI0004740 SEQID NO:181)、bta-mir-18b(MI0004732 SEQ ID NO:182)、bta-mir-93(MI0005050SEQ ID NO:183)、dre-mir-17a-1(MI0001897 SEQ ID NO:184)、dre-mir-17a-2(MI0001898 SEQ ID NO:185)、dre-mir-18a(MI0001900 SEQ ID NO:186)、dre-mir-18b(MI0001901 SEQ ID NO:187)、dre-mir-18c(MI0001902 SEQ IDNO:188)、dre-mir-93(MI0001954 SEQ ID NO:189)、fru-mir-17-1(MI0003231 SEQID NO:190)、fru-mir-17-2(MI0003441 SEQ ID NO:191)、fru-mir-18(MI0003233SEQ ID NO:192)、gga-mir-106(MI0001210 SEQ ID NO:193)、gga-mir-17(MI0001184 SEQ ID NO:194)、gga-mir-18a(MI0001183 SEQ ID NO:195)、gga-mir-18b(MI0001209 SEQ ID NO:196)、ggo-mir-106a(MI0003096 SEQ IDNO:197)、ggo-mir-106b(MI0003059 SEQ ID NO:198)、ggo-mir-17(MI0002965SEQ ID NO:199)、ggo-mir-18(MI0002966 SEQ ID NO:200)、ggo-mir-93(MI0003060 SEQ ID NO:201)、hsa-mir-106a(MI0000113 SEQ ID NO:202)、hsa-mir-106b(MI0000734 SEQ ID NO:203)、hsa-mir-17(MI0000071 SEQ IDNO:204)、hsa-mir-18a(MI0000072 SEQ ID NO:205)、hsa-mir-18b(MI0001518 SEQID NO:206)、hsa-mir-93(MI0000095 SEQ ID NO:207)、lca-mir-17(MI0002971SEQ ID NO:208)、lca-mir-18(MI0002972 SEQ ID NO:209)、lla-mir-106b(MI0003078 SEQ ID NO:210)、lla-mir-17(MI0003013 SEQ ID NO:211)、lla-mir-18(MI0003014 SEQ ID NO:212)、lla-mir-93(MI0003079 SEQ ID NO:213)、mdo-mir-17(MI0005354 SEQ ID NO:214)、mdo-mir-18(MI0005355 SEQ IDNO:215)、mdo-mir-93(MI0005369 SEQ ID NO:216)、mml-mir-106a(MI0003107SEQ ID NO:217)、mml-mir-106b(MI0003073 SEQ ID NO:218)、mml-mir-17(MI0003001 SEQ ID NO:219)、mml-mir-18(MI0003002 SEQ ID NO:220)、mml-mir-93(MI0003074 SEQ ID NO:221)、mmu-mir-106a(MI0000406 SEQ IDNO:222)、mmu-mir-106b(MI0000407 SEQ ID NO:223)、mmu-mir-17(MI0000687SEQ ID NO:224)、mmu-mir-18(MI0000567 SEQ ID NO:225)、mmu-mir-93(MI0000581 SEQ ID NO:226)、mne-mir-106a(MI0003120 SEQ ID NO:227)、mne-mir-106b(MI0003081 SEQ ID NO:228)、mne-mir-17(MI0003019 SEQ IDNO:229)、mne-mir-18(MI0003020 SEQ ID NO:230)、mne-mir-93(MI0003082 SEQID NO:231)、ppa-mir-106a(MI0003102 SEQ ID NO:232)、ppa-mir-106b(MI0003064 SEQ ID NO:233)、ppa-mir-17(MI0002983 SEQ ID NO:234)、ppa-mir-18(MI0002984 SEQ ID NO:235)、ppa-mir-93(MI0003065 SEQ IDNO:236)、ppy-mir-106a(MI0003109 SEQ ID NO:237)、ppy-mir-106b(MI0003067SEQ ID NO:238)、ppy-mir-17(MI0002989 SEQ ID NO:239)、ppy-mir-18(MI0002990 SEQ ID NO:240)、ppy-mir-93(MI0003068 SEQ ID NO:241)、ptr-mir-106a(MI0003112 SEQ ID NO:242)、ptr-mir-106b(MI0003070 SEQ IDNO:243)、ptr-mir-17(MI0002995 SEQ ID NO:244)、ptr-mir-18(MI0002996 SEQ IDNO:245)、ptr-mir-93(MI0003071 SEQ ID NO:246)、rno-mir-106b(MI0000889 SEQID NO:247)、rno-mir-17(MI0000845 SEQ ID NO:248)、rno-mir-18(MI0000846SEQ ID NO:249)、rno-mir-93(MI0000880 SEQ ID NO:250)、sla-mir-106a(MI0003115 SEQ ID NO:251)、sla-mir-106b(MI0003076 SEQ ID NO:252)、sla-mir-17(MI0003007 SEQ ID NO:253)、sla-mir-18(MI0003008 SEQ IDNO:254)、sla-mir-93(MI0003077 SEQ ID NO:255)、ssc-mir-106a(MI0002412 SEQID NO:256)、ssc-mir-18(MI0002455 SEQ ID NO:257)、tni-mir-17-1(MI0003232SEQ ID NO:258)、tni-mir-17-2(MI0003442 SEQ ID NO:259)、tni-mir-18(MI0003234 SEQ ID NO:260)、xla-mir-18(MI0001454 SEQ ID NO:261)、xtr-mir-106(MI0004822 SEQ ID NO:262)、xtr-mir-17(MI0004803 SEQ IDNO:263)、xtr-mir-18a(MI0004893 SEQ ID NO:264)、xtr-mir-18b(MI0004959 SEQID NO:265)、xtr-mir-93a(MI0004900 SEQ ID NO:266)、和xtr-mir-93b(MI0004901SEQ ID NO:267)。通常,miR-20家族具有共有序列(如使用核苷酸的WIPO标准命名所描述)SUGCWNHNNRKGYASNU SEQ ID NO:268,具体而言,命名为miR-20s的miR-20家族成员包含共有序列YAAAGUGCUYAYAGUGCAGGUSEQ ID NO:269。
在特别的实施方案中,包含miR-20的核酸或者miR-20核酸是hsa-miR-20a和/或hsa-miR-20b或其变体。在某些方面中,miR-20是miR-20a或miR-20b。miR-20可以是hsa-mir-20,包括hsa-miR-20a或hsa-miR20b。在进一步的方面中,miR-20核酸可以与1、2、3、4、5、6、7、8、9、10或更多个miRNA一起施用。miRNA可以并行施用、顺序施用或者以安排的进程施用。在某些方面,miR-20可以与let-7、miR-15a、miR-16、miR-21、miR-26a、miR-31、miR-34a、miR-126、miR-143、miR-145、miR-147、miR-188、miR-200b、miR-200c、miR-215、miR-216、miR-292-3p和/或miR-331中一个或一个以上联合施用。miRNA的全部或组合可以在单一制剂中施用。施用可以在第二治疗法之前、之中或之后。
miR-20核酸还可以包括多个异源核酸序列,即通常在自然界不能发现的有效连接miR-20的那些序列,例如启动子、增强子等。miR-20核酸可以是重组核酸,并且可以是核糖核酸或脱氧核糖核酸。重组核酸可包含miR-20表达盒,即当导入包含核酸合成成分的环境中时表达核酸的核酸片段。在进一步的方面中,表达盒包含在病毒载体、或质粒DNA载体或其他治疗性核酸载体或递送运载体,包括脂质体等等之中。在某些方面,病毒载体可以以1×102、1×103、1×104、1×105、1×106、1×107、1×108、1×109、1×1010、1×1011、1×1012、1×1013、1×1014pfu或病毒颗粒(vp)施用。
在特定方面中,miR-20核酸是合成的核酸。此外,本发明核酸可以是完全合成或部分合成。在仍进一步的方面中,本发明核酸或编码其的DNA可以以0.001、0.01、0.1、1、10、20、30、40、50、100、200、400、600、800、1000、2000至4000μg或mg施用,包括它们之间的所有数值和范围。在仍然进一步的方面中,本发明核酸,包括合成的核酸,可以以0.001、0.01、0.1、1、10、20、30、40、50、100至200μg或mg每千克(kg)体重施用。其中所述的每一种量可以在一段时间内施用,包括0.5、1、2、3、4、5、6、7、8、9、10分钟、小时、天、周、月或年,包括它们之间的所有数值和范围。
在某些实施方案中,组合物的施用可以是肠内的或肠胃外的。在某些方面,肠内施用是口服。在更多方面中,肠胃外施用是病损部位内、血管内、颅内、胸膜内、瘤内、腹膜内、肌内、淋巴内、腺内、皮下、局部、支气管内、气管内、鼻内、吸入或滴注。本发明组合物可区域施用或局部施用并且没必要直接施用入病损部位内。
在某些方面,受调节的一个基因或多个基因包含表1、3、4和5中鉴定的1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、20、25、30、35、40、45、50、100、150、200或更多个基因或基因组合。在仍进一步的方面中,受调节的一个基因或多个基因可排除表1、3、4和5中鉴定的1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、20、25、30、35、40、45、50、100、150、175或更多个基因或基因组合。调节包括调节细胞、组织或器官中的转录、mRNA水平、mRNA翻译和/或蛋白质水平。在某些方面,基因表达或基因产物水平,例如mRNA,被下调或上调。在特定方面中,被调节的基因包含或选自(并且可能甚至排除)表1、3、4和5中鉴定的1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28个或全部的基因或其任意组合。在某些实施方案中,被调节的或者被选择调节的基因来自表1。在进一步的实施方案中,被调节的或者被选择调节的基因来自表3。在仍进一步的实施方案中,被调节的或者被选择调节的基因来自表4。在仍然进一步的实施方案中,被调节的或者被选择调节的基因来自表5。本发明实施方案还可以包括,在选择治疗模式,例如施用miR-20核酸或模拟物之前,得到或评估靶细胞的基因表达谱或miRNA谱。与通过登录号或者数据库提交号所命名的核酸和基因有关的数据库内容,从本申请的提交日起通过参考并入本文。在本发明的某些方面,一个或一个以上miRNA可以调节单一基因。在进一步的方面中,在一个或一个以上遗传途径、细胞途径或生理途径中的一个或一个以上基因可以被一个或一个以上miRNA,包括与其他miRNA组合的miR-20核酸调节。
表1.用pre-miR hsa-miR-20a转染人癌症细胞后增加表达(正值)或降低表达(负值)的基因
基因符号 | RefSeq转录物ID(Pruitt等,2005) | log2 |
ABCA1 | NM_005502 | -1.01473 |
ALDH6A1 | NM_005589 | 1.04418 |
ANG///RNASE4 | NM_001145///NM_002937///NM194430///NM_194431 | 0.831501 |
ANK3 | NM_001149///NM_020987 | 1.16621 |
ANKRD46 | NM_198401 | 0.746793 |
ANTXR1 | NM_018153///NM_032208///NM_053034 | -1.13558 |
APOH | NM_000042 | 1.21612 |
AQP3 | NM_004925 | 1.23947 |
ARG2 | NM_001172 | 2.10966 |
ARID5B | NM_032199 | 1.35503 |
ARL7 | NM_005737 | -1.06672 |
ARTS-1 | NM_016442 | -1.08712 |
ATP6V0E | NM_003945 | -1.0247 |
ATP9A | NM_006045 | 1.01985 |
AXL | NM_001699///NM_021913 | 0.763332 |
BCL2A1 | NM_004049 | -1.77411 |
BEAN | XM_375359 | -0.714992 |
BICD2 | NM_001003800///NM_015250 | -0.781188 |
BTG3 | NM_006806 | -1.19255 |
BTN3A2 | NM_007047 | -0.765137 |
C19orf2 | NM_003796///NM_134447 | -0.755164 |
C21orf25 | NM_199050 | -0.791738 |
C2orf17 | NM_024293 | -0.945852 |
C2orf31 | --- | 0.942376 |
C5orf13 | NM_004772 | 0.909743 |
C6orf120 | NM_001029863 | -0.719609 |
C6orf216 | NM_206908///NM_206910///NM_206911///NM_206912///XR_000259 | 0.743816 |
CA12 | NM_001218///NM_206925 | -0.885975 |
CCL2 | NM_002982 | -1.20227 |
CCND1 | NM_053056 | -1.21374 |
CCNG1 | NM_004060///NM_199246 | 0.901161 |
CDC37L1 | NM_017913 | -0.940979 |
CDH17 | NM_004063 | 0.855968 |
CDH4 | NM_001794 | -0.99035 |
CEBPD | NM_005195 | 0.826406 |
CFH///CFHL1 | NM_000186///NM_001014975///NM_002113 | 0.762913 |
CGI-38 | NM_015964///NM_016140 | 0.794501 |
CLIC4 | NM_013943 | 0.705933 |
COBLL1 | NM_014900 | 1.27699 |
COL3A1 | NM_000090 | 0.878014 |
COL4A1 | NM_001845 | -1.05154 |
COL4A2 | NM_001846 | -1.19339 |
COQ2 | NM_015697 | -0.707833 |
CPM | NM_001005502///NM_001874///NM_198320 | -1.05328 |
CRIPT | NM_014171 | -0.903098 |
CSPG2 | NM_004385 | -1.17186 |
CTDSP2 | NM_005730 | 1.22904 |
CTH | NM_001902///NM_153742 | 1.52696 |
CXCL5 | NM_002994 | 0.702306 |
DAZAP2 | NM_014764 | -1.12846 |
DAZAP2///LOC401029 | NM_014764///XM_376165 | -0.826976 |
DCBLD2 | NM_080927 | -0.838774 |
DCP2 | NM_152624 | 1.28955 |
DDAH1 | NM_012137 | 1.25935 |
DHCR24 | NM_014762 | 1.10459 |
DKFZP586A0522 | NM_014033 | 0.837826 |
DNAJB6 | NM_005494///NM_058246 | -0.983039 |
DNAJC15 | NM_013238 | 0.799928 |
DOCK4 | NM_014705 | -0.755571 |
DPYSL4 | NM_006426 | 0.996621 |
DSC2 | NM_004949///NM_024422 | 1.18113 |
DST | NM_001723///NM_015548///NM_020388///NM_183380 | 1.31681 |
DSU | NM_018000 | 0.714098 |
DUSP1 | NM_004417 | -0.823862 |
DUSP5 | NM_004419 | 0.708305 |
EHF | NM_012153 | 0.884735 |
EIF2C1 | NM_012199 | -0.938174 |
EIF2S1 | NM_004094 | -1.20235 |
EPHB2 | NM_004442///NM_017449 | -1.25564 |
EREG | NM_001432 | -1.14689 |
ETS2 | NM_005239 | -0.702474 |
F2RL1 | NM_005242 | -0.7278 |
FAM18B | NM_016078 | -0.75677 |
FAM45B ///FAM45A | NM_018472///NM_207009 | -0.764547 |
FAM46A | NM_017633 | 1.30368 |
FGB | NM_005141 | 1.17875 |
FGFR3 | NM_000142///NM_022965 | 1.01201 |
FGFR4 | NM_002011///NM_022963///NM_213647 | 1.01795 |
FGG | NM_000509///NM_021870 | 1.22961 |
FGL1 | NM_004467///NM_147203///NM_201552///NM_201553 | 1.0979 |
FJX1 | NM_014344 | -1.51629 |
FLJ13910 | NM_022780 | 1.01348 |
FLJ31568 | NM_152509 | 0.866822 |
FLRT3 | NM_013281///NM_198391 | 1.05708 |
FTS | NM_001012398///NM_022476 | -0.892226 |
FYCO1 | NM_024513 | -1.48134 |
FZD7 | NM_003507 | 0.83388 |
GABRA5 | NM_000810 | -1.21465 |
GATA6 | NM_005257 | 1.38308 |
GFPT2 | NM_005110 | -0.719774 |
GK | NM_000167///NM_203391 | 1.06082 |
GLIPR1 | NM_006851 | -0.802136 |
GLUL | NM_001033044///NM_001033056///NM_002065 | 1.16529 |
GNS | NM_002076 | -1.14826 |
GOLPH2 | NM_016548///NM_177937 | -0.800666 |
GYG2 | NM_003918 | 1.08933 |
HAS2 | NM_005328 | -1.00653 |
HCCS | NM_005333 | -1.01956 |
HIC2 | NM_015094 | 1.19662 |
HIPK3 | NM_005734 | 0.741004 |
HMGA2 | NM_001015886///NM_003483///NM_003484 | 0.766307 |
HMGCS1 | NM_002130 | 0.829036 |
HN1 | NM_001002032///NM_001002033///NM_016185 | -1.15736 |
ID4 | NM_001546 | 0.840565 |
IGFBP1 | NM_000596///NM_001013029 | -1.31178 |
IL11 | NM_000641 | -1.97819 |
IL8 | NM_000584 | -1.61544 |
IQGAP2 | NM_006633 | 1.09979 |
ITGB4 | NM_000213///NM_001005619///NM_001005731 | -1.03625 |
JAK1 | NM_002227 | -0.988167 |
JUN | NM_002228 | -0.905043 |
KCNK5 | NM_003740 | 1.02097 |
KCNMA1 | NM_001014797///NM_002247 | -1.19025 |
KIAA0494 | NM_014774 | -1.27759 |
KIAA0882 | NM_015130 | -1.01049 |
KLF10 | NM_001032282///NM_005655 | -0.967187 |
KRT20 | NM_019010 | 0.737754 |
KRT4 | NM_002272 | 1.4643 |
LEPROT | NM_017526 | -0.918245 |
LHFP | NM_005780 | -0.788633 |
LIMK1 | NM_002314///NM_016735 | -1.59588 |
LOC257407 | --- | 0.902938 |
LRRC54 | NM_015516 | -0.738825 |
M6PR | NM_002355 | -1.30233 |
MAP3K1 | XM_042066 | 1.02679 |
MAP3K2 | NM_006609 | -0.961694 |
MARCH6 | NM_005885 | -1.04209 |
MATN3 | NM_002381 | 0.899535 |
MGAM | NM_004668 | 1.36376 |
MGC11332 | NM_032718 | -0.904724 |
MICA | NM_000247 | -1.15081 |
MICAL2 | NM_014632 | -0.758803 |
MICAL-L1 | NM_033386 | 0.719021 |
MOBK1B | NM_018221 | -1.15411 |
NAGK | NM_017567 | -1.08281 |
NES | NM_006617 | 1.02351 |
NID1 | NM_002508 | 0.856316 |
NPAS2 | NM_002518 | -1.17566 |
NPTX1 | NM_002522 | -1.44279 |
NRP2 | NM_003872///NM_018534///NM_201264///NM_201266///NM_201267///NM_201279 | -0.811956 |
NUPL1 | NM_001008564///NM_001008565///NM_014089 | -0.809253 |
OBSL1 | XM_051017 | 1.35426 |
OLR1 | NM_002543 | 1.36616 |
OSTM1 | NM_014028 | -1.05687 |
OXTR | NM_000916 | -0.977849 |
P8 | NM_012385 | 1.31518 |
PDCD4 | NM_014456///NM_145341 | 0.823334 |
PDGFRL | NM_006207 | 0.726654 |
PDZK1 | NM_002614 | 1.23771 |
PELI2 | NM_021255 | 1.00074 |
PFKP | NM_002627 | -1.1192 |
PGK1 | NM_000291 | 0.989946 |
PKP2 | NM_001005242///NM_004572 | 1.03828 |
PLAU | NM_002658 | -1.39659 |
PLCB1 | NM_015192///NM_182734 | 0.891129 |
POLR3G | NM_006467 | -1.6886 |
PON2 | NM_000305///NM_001018161 | -0.827616 |
PTHLH | NM_002820///NM_198964///NM_198965///NM_198966 | -0.902774 |
QKI | NM_006775///NM_206853///NM_206854///NM_206855 | 0.883687 |
RAB22A | NM_020673 | -1.26569 |
RARRES1 | NM_002888///NM_206963 | 0.715317 |
RBKS | NM_022128 | -0.842482 |
RGC32 | NM_014059 | 0.866694 |
RHOC | NM_175744 | -0.874504 |
RNH1 | NM_002939///NM_203383///NM_203384/// | -1.0531 |
NM_203385///NM_203386///NM_203387 | ||
RRM2 | NM_001034 | -0.896356 |
S100P | NM_005980 | 1.6654 |
SERF1A ///SERF1B | NM_021967///NM_022978 | -0.777057 |
SERPINE1 | NM_000602 | -2.25784 |
SESN1 | NM_014454 | 0.845489 |
SGPL1 | NM_003901 | -1.01306 |
SKP2 | NM_005983///NM_032637 | 0.744696 |
SLC11A2 | NM_000617 | 0.845458 |
SLC1A4 | NM_003038 | 0.721939 |
SLC2A3 | NM_006931 | 0.879266 |
SNAP23 | NM_003825///NM_130798 | 0.791062 |
SPARC | NM_003118 | 1.39199 |
SPFH2 | NM_001003790///NM_001003791///NM_007175 | 0.782553 |
SPOCK | NM_004598 | -1.19175 |
SQLE | NM_003129 | 0.773943 |
STC1 | NM_003155 | -1.38313 |
STX3A | NM_004177 | 0.809319 |
SYNE1 | NM_015293///NM_033071///NM_133650///NM_182961 | -0.721107 |
TBC1D2 | NM_018421 | -0.96565 |
TGFBR2 | NM_001024847///NM_003242 | -0.924623 |
TJP2 | NM_004817///NM_201629 | 1.19979 |
TM4SF20 | NM_024795 | 1.0172 |
TM4SF4 | NM_004617 | -0.700123 |
TM7SF1 | NM_003272 | -1.8947 |
TMEPAI | NM_020182///NM_199169///NM_199170///NM_199171 | -1.02732 |
TNFAIP6 | NM_007115 | -2.06788 |
TNFRSF10B | NM_003842///NM_147187 | -0.725441 |
TNRC9 | XM_049037 | 1.01681 |
TSPAN8 | NM_004616 | 0.858077 |
TXLNA | NM_175852 | -0.739199 |
UEV3 | NM_018314 | -0.955638 |
USP46 | NM_022832 | -1.54141 |
VANGL1 | NM_138959 | -0.809203 |
VLDLR | NM_001018056///NM_003383 | -0.99136 |
VTN | NM_000638 | 1.29843 |
WNT5A | NM_003392 | 1.06927 |
ZBTB10 | NM_023929 | 0.763786 |
ZNF331 | NM_018555 | 0.733817 |
ZNF395 | NM_018660 | 0.710369 |
ZNF467 | NM_207336 | 0.738748 |
本发明的进一步的实施方案涉及调节细胞途径的方法,包括向细胞施用一定量的分离的核酸,所述分离的核酸包含miR-20核酸序列,所述miR-20核酸序列的量足以调节细胞途径,特别是表2所述那些途径或者已知包括表1、3、4和/或5中一个或一个以上基因的途径的表达、功能、状况或状态。细胞途径的调节包括,但不限于调节一个或一个以上基因的表达。基因调节可包括抑制内源miRNA的功能或者向细胞、组织或者受试者提供功能性miRNA。调节指基因或其相关基因产物(例如mRNA)或蛋白质的表达水平或活性,例如mRNA水平可以被调节,或者mRNA翻译可以被调节。调节可以增加或者上调基因或基因产物,或者其可以降低或下调基因或基因产物(例如蛋白质水平或活性)。
仍然进一步的实施方案包括施用miRNA或其模拟物和/或治疗患有、怀疑患有或者有危险发展成病理状况的受试者或者患者的方法,包括下列一个或一个以上步骤(a)向患者或受试者施用一定量的分离的核酸,所述一定量的分离的核酸包含足以调节细胞途径表达的量的miR-20核酸序列;和(b)施用第二治疗法,其中细胞途径的调节使患者或受试者对第二治疗法敏感或者提高第二治疗法的疗效。疗效提高可以包括降低第二治疗法的毒性、剂量或持续时间,或者有加性效应或协同效应。细胞途径可包括,但不限于下表2中所述的一个或一个以上途径,或者已知包括表1、3、4和/或5中一个或一个以上基因的途径。第二治疗法可以在分离的核酸或miRNA施用之前、之中和/或之后施用。
第二治疗法可以包括施用第二miRNA或治疗性核酸,例如siRNA或反义寡核苷酸,或可以包括多种标准治疗法,例如药物、化学治疗、放射治疗、药物治疗、免疫治疗等。本发明实施方案还可以包括确定或评估基因表达或基因表达谱,用于选择适当治疗法。在特定方面中,第二治疗法是化学治疗。化学治疗可包括,但不限于紫杉醇、顺铂、碳铂、阿霉素、草酸铂、larotaxel、红豆杉醇、拉帕替尼、多西他塞(docetaxel)、甲氨蝶呤、卡培他滨(capecitabine)、长春瑞滨、环磷酰胺、吉西他滨、氨柔比星、阿糖胞苷、依托泊苷(etoposide)、喜树碱、地塞米松、达沙替尼、替吡法尼、贝伐单抗(bevacizumab)、西罗莫司、西罗莫司脂化物、依维莫司、洛那法尼、西妥昔单抗、埃罗替尼、吉非替尼、甲磺酸伊马替尼、利妥昔单抗、曲妥珠单抗、洛可达唑(nocodazole)、索拉非尼、舒尼替尼、硼替佐米、阿仑单抗、吉妥单抗、托西莫单抗或替伊莫单抗。
本发明实施方案包括治疗患有疾病或状况的受试者的方法,包括下列一个或一个以上步骤(a)确定选自表1、3、4和/或5的一个或一个以上基因的表达谱;(b)基于表达谱评估受试者对治疗法的敏感性;(c)基于所评估的敏感性选择治疗法;和(d)使用所选择的治疗法治疗受试者。有代表性地,疾病或状况将具有作为成分的指示物,或者出现表1、3、4和/或5的一个或一个以上基因的误调节。
在某些方面,2、3、4、5、6、7、8、9、10或更多个miRNA可以顺序使用或者组合使用。例如,可以基于观察两个给定miRNA是否共享在特定疾病或状况中被改变的、表1,2,4和5所列一组靶基因或途径,选择miR-20与另一miRNA的任意组合。该两个miRNA可以导致治疗改善(例如毒性降低、效果更大、延长缓解时间或者受试者状况的其他改善)、效果增强、出现提供额外或改良治疗反应的加性效应或协同效应。不希望被任何特定理论所束缚,两个miRNA的协同作用是更有效地调节同一些基因或相关基因(通过共同的途径或生物学最终结果)的结果(例如源于同一靶标或相关靶标上不同的结合位点)和/或调节不同基因的结果,但是在一些特定疾病或状况中已经涉及所有这些。
在某些方面,miR-20和let-7可以向患有以下疾病的患者施用:急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、黑素瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌或尿路上皮癌。
进一步的方面包括向患有以下疾病的患者施用miR-20和miR-15:星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌。
在仍进一步的方面中,向患有以下疾病的患者施用miR-20和miR-16:星形细胞瘤、乳腺癌、膀胱癌、结直肠癌、子宫内膜癌、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、非小细胞肺癌、卵巢癌、食管癌、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌。
本发明方面包括向患有以下疾病的患者施用miR-20和miR-21的方法:星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、黑素瘤、套细胞淋巴瘤、神经母细胞瘤、非小细胞肺癌、卵巢癌、食管癌、胰腺癌、前列腺癌或头颈部鳞状细胞癌。
在仍进一步的方面中,向患有以下疾病的患者施用miR-20和miR-26a:急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、白血病、黑素瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌或前列腺癌的患者。
在仍然进一步的方面中,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、黑素瘤、套细胞淋巴瘤、多发性骨髓瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌或尿路上皮癌的患者施用miR-20和miR-34a。
在某些方面,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、黑素瘤、套细胞淋巴瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-126。
在进一步的方面中,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、黑素瘤、套细胞淋巴瘤、多发性骨髓瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-143。
在仍进一步的方面中,向患有星形细胞瘤、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、脂肪瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-147。
仍然在另一方面,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、白血病、黑素瘤、多发性骨髓瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-188。
在更多方面,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、脂肪瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌或尿路上皮癌的患者施用miR-20和miR-215。
在某些方面,向患有星形细胞瘤、乳腺癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、前列腺癌或头颈部鳞状细胞癌的患者施用miR-20和miR-216。
在进一步的方面中,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、白血病、脂肪瘤、黑素瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌或尿路上皮癌的患者施用miR-20和miR-292-3p。
在仍进一步的方面中,向患有星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、白血病、黑素瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-331。
在仍然进一步的方面中,向患有乳腺癌、宫颈癌、结直肠癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、白血病、脂肪瘤、多发性骨髓瘤、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌或甲状腺癌的患者施用miR-20和miR-200b/c。
可以预期到的是当miR-20与一种或一种以上其他miRNA分子组合施用时,两种不同miRNA可以同时施用或者相继施用。在一些实施方案中,治疗以一种miRNA进行,并且在治疗1、2、3、4、5、6、7、8、9、10、15、20、25、30、35、40、45、50、55分钟、1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24小时、1、2、3、4、5、6、7天、1、2、3、4、5周、或者1、2、3、4、5、6、7、8、9、10、11或12个月或者任意此类组合之后紧接着用其他miRNA治疗。
更多实施方案包括鉴定和评估指示细胞或组织中miR-20状态的表达谱,包括来自表1、3、4和/或5的一个或一个以上基因或者其任意组合的表达评估。
术语“miRNA”依照其普通的和显然的含义使用并且指在真核生物中存在的、涉及基于RNA的基因调节的微RNA分子。见,例如Carrington等,2003,其通过参考并入本文。术语可以指从前体加工而来的单链RNA分子或者在某些情况下指其前体本身或者其模拟物。
在一些实施方案中,知道细胞是否内源性表达特定miRNA或者此种表达是否在特定情况下受影响或者何时其处于特定疾病状态是有用的。因此,在本发明的一些实施方案中,方法包括测定细胞或者包含细胞的样品中指示目的基因表达水平的一个或一个以上miRNA标志基因或mRNA或其他分析物的存在。因此,在一些实施方案中,方法包括产生样品RNA谱的步骤。术语“RNA谱”或“基因表达谱”指关于样品中一个或一个以上基因或遗传标记表达模式的一组信息(例如鉴定来自表1、3、4和/或5的一个或一个以上标记或基因的多个核酸探针);可以预期到的是核酸谱可以使用一组RNA、使用例如本领域普通技术人员众所周知的核酸扩增或杂交技术得到。患者样品中的表达谱与参照表达谱,例如来自正常或者非病理样品的表达谱或者数字化参照之间的差异指示着病理、疾病或癌性状况。在某些方面,表达谱是发展成此种状况之倾向或可能性的指示物(即,疾病或状况的危险因素)。此种危险性或倾向性指示着进行治疗、增加监控、预防措施等等。核酸或探针组可以包含或鉴定相应mRNA的片段,并且可以包括表1、3、4和/或5所列的或者通过本文所述方法鉴定的基因或遗传标记或核酸、mRNA或其代表性探针的全部或者1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、100、200、500或更多个片段,包括可以从它们当中导出的任何整数或范围的部分。
本发明的某些实施方案涉及用于评估、预测或治疗患者中病理状况的组合物和方法,包括测量或确定患者样品中一个或一个以上miRNA或标记的表达谱,其中患者样品的表达谱与正常样品的表达谱或参照表达谱之间的差异指示着病理状态和特定癌症。在本发明的某些方面,miRNA、细胞途径、基因或遗传标记是或代表着表1、2、3、4和/或5中所述一个或一个以上途径或标记,包括它们的任意组合。
本发明的方面包括诊断、评估或治疗病理状况或者预防病理状况出现症状。例如,可以使用方法筛选病理状况;评估病理状况的预后;将病理状况分级;评估病理状况对治疗的反应;或作为第一治疗调节一个基因、多个基因或相关途径的表达或者使受试者对第二治疗法更敏感或更易反应。在特定方面,评估患者的病理状况可以评估患者的预后。预后可包括,但不限于估算存活时间或期望存活时间,评估对治疗法的反应等。在某些方面,一个或一个以上基因或标记的改变表达预示着患者具有病理状况的,其中标记是表1、3、4和/或5中的一个或一个以上,包括其任意组合。
表2.在人癌细胞中过表达hsa-miR-20a之后显著改变的功能性细胞途径
基因数量 | 途径功能 |
17 | 细胞运动,细胞生长和增殖,心血管系统发育和功能 |
14 | 细胞形态学,心血管系统发育和功能,细胞与细胞的信号转导和相互作用 |
13 | 内分泌系统素乱,小分子生物化学,免疫应答 |
13 | 心血管系统发育和功能,组织形态学,遗传病 |
12 | 脂类代谢,分子转运,小分子生物化学 |
9 | 发育障碍,肿瘤形态学,癌症 |
1 | 细胞信号转导,分子转运,神经疾病 |
1 | 癌症,细胞周期,骨骼和肌肉障碍 |
表3.预测的hsa-miR-20a靶基因
基因符号 | RefSeq转录物ID | 描述 |
(Pruitt等,2005) | ||
76P | NM_014444 | γ微管蛋白环复合体蛋白质(76p基因) |
A1BG | NM_130786 | α1B-糖蛋白 |
A2ML1 | NM_144670 | α-2-巨球蛋白样蛋白1 |
AADAC | NM_001086 | 芳基乙酰胺脱乙酰酶 |
AADACL1 | NM_020792 | 芳基乙酰胺脱乙酰酶样蛋白1 |
AADAT | NM_016228 | α-氨基己二酸氨基转移酶 |
AARSL | NM_020745 | 丙氨酰-tRNA合成酶样 |
ABAT | NM_000663 | 4-氨基丁酸氨基转移酶前体 |
ABCA1 | NM_005502 | ATP-结合盒,亚家族A成员1 |
ABCA10 | NM_080282 | ATP-结合盒,亚家族A,成员10 |
ABCB9 | NM_019624 | ATP-结合盒,亚家族B(MDR/TAP), |
ABCC13 | NM_172024 | ATP-结合盒蛋白质C13同种型b |
ABCC5 | NM_005688 | ATP-结合盒,亚家族C,成员5 |
ABCD2 | NM_005164 | ATP-结合盒,亚家族D,成员2 |
ABCE1 | NM_002940 | ATP-结合盒,亚家族E,成员1 |
ABCG2 | NM_004827 | ATP-结合盒,亚家族G,成员2 |
ABCG4 | NM_022169 | ATP-结合盒,亚家族G,成员4 |
ABHD11 | NM_031295 | 含自水解酶结构域11同种型4 |
ABHD13 | NM_032859 | 假定蛋白LOC84945 |
ABHD2 | NM_007011 | 含α/β水解酶结构域蛋白质 |
ABHD4 | NM_022060 | 含自水解酶结构域4 |
ABI1 | NM_001012750 | abl结合因子1同种型b |
ABL1 | NM_005157 | v-abl埃布尔森鼠白血病病毒癌基因 |
ABLIM1 | NM_001003407 | 肌动蛋白结合LIM蛋白质1同种型b |
ABR | NM_001092 | 活性断裂点丛集区相关 |
ABT1 | NM_013375 | 基本转录激活物1 |
ABTB1 | NM_032548 | 锚蛋白重复和含BTB(POZ)结构域1 |
ACAD8 | NM_014384 | 酰基辅酶A脱氢酶家族,成员8 |
ACADSB | NM_001609 | 酰基辅酶A脱氢酶,短/分枝的 |
ACIN1 | NM_014977 | 细胞凋亡染色体凝聚诱导物1 |
ACPL2 | NM_152282 | 酸性磷酸酶样蛋白2 |
ACPP | NM_001099 | 前列腺酸性磷酸酶前体 |
ACSL1 | NM_001995 | 酰基辅酶合成酶长链家族成员1 |
ACSL4 | NM_004458 | 酰基辅酶合成酶长链家族成员4 |
ACSM1 | NM_052956 | 酰基辅酶合成酶中链家族成员 |
ACTR2 | NM_001005386 | 肌动蛋白相关蛋白2同种型a |
ACVR1B | NM_004302 | 激活素A类型IB受体同种型a前体 |
ADAM19 | NM_033274 | ADAM金属肽酶结构域19同种型2 |
ADAM21 | NM_003813 | ADAM金属肽酶结构域21前蛋白原 |
ADAM33 | NM_025220 | ADAM金属肽酶结构域33同种型α |
ADAM9 | NM_001005845 | ADAM金属肽酶结构域9同种型2 |
ADAMTS3 | NM_014243 | 具有血小板反应蛋白的ADAM金属肽酶类型1 |
ADAMTS5 | NM_007038 | 具有血小板反应蛋白的ADAM金属肽酶类型1 |
ADAMTSL2 | NM_014694 | ADAMTS样蛋白2 |
ADAMTSL5 | NM_213604 | 含血小板反应蛋白,类型I,结构域6 |
ADAR | NM_001025107 | 腺苷脱氨酶,RNA-特异性同种型d |
ADARB1 | NM_001033049 | RNA-特异性腺苷脱氨酶B1同种型4 |
ADAT1 | NM_012091 | 腺苷脱氨酶,tRNA-特异性1 |
ADCY1 | NM_021116 | 脑腺苷酸环化酶1 |
ADCY6 | NM_015270 | 腺苷酸环化酶6同种型a |
ADCY9 | NM_001116 | 腺苷酸环化酶9 |
ADD1 | NM_001119 | 内收蛋白1(α)同种型a |
ADHFE1 | NM_144650 | 乙醇脱氢酶,含铁,1 |
ADIPOR2 | NM_024551 | 脂连蛋白受体2 |
ADM2 | NM_024866 | 肾上腺髓质素2前体 |
ADORA2B | NM_000676 | 腺苷A2b受体 |
ADPN | NM_025225 | 脂肪营养蛋白 |
ADPRHL2 | NM_017825 | ADP-核糖基水解酶样蛋白2 |
ADRA1B | NM_000679 | α-1B-肾上腺素能受体 |
ADRA2A | NM_000681 | α-2A-肾上腺素能受体 |
ADRA2B | NM_000682 | α-2B-肾上腺素能受体 |
ADRB3 | NM_000025 | 肾上腺素能,β-3-,受体 |
ADSL | NM_000026 | 腺苷琥珀酸裂解酶 |
AEBP2 | NM_153207 | AE结合蛋白2 |
AFAR3 | NM_201252 | 黄曲霉毒素B1醛还原酶3 |
AFF1 | NM_005935 | 髓/淋巴或混合谱系白血病 |
AFF2 | NM_002025 | 脆性X智力低下2 |
AFF4 | NM_014423 | 来自5q31的ALL1融合基因 |
AGA | NM_000027 | 天冬氨酰氨基葡糖苷酶前体 |
AGBL2 | NM_024783 | ATP/GTP结合蛋白质样蛋白2 |
AGGF1 | NM_018046 | 血管生成因子VG5Q |
AGPAT4 | NM_001012733 | 1-酰基甘油-3-磷酸O-酰基转移酶4 |
AGPAT5 | NM_018361 | 1-酰基甘油-3-磷酸O-酰基转移酶5 |
AGTPBP1 | NM_015239 | ATP/GTP结合蛋白1 |
AGTR2 | NM_000686 | 血管紧张素II受体,类型2 |
AGXT2L1 | NM_031279 | 丙氨酸-乙醛酸氨基转移酶2样蛋白1 |
AHCTF1 | NM_015446 | 转录因子ELYS |
AHCY | NM_000687 | S-腺苷高半胱氨酸水解酶 |
AHI1 | NM_017651 | Jouberin |
AHNAK | NM_001620 | AHNAK核蛋白同种型1 |
AICDA | NM_020661 | 活化诱导胞苷脱氨酶 |
AIM1 | NM_001624 | 黑素瘤缺乏1 |
AIPL1 | NM_001033054 | 芳烃受体相互作用 |
AJAP1 | NM_018836 | 跨膜蛋白质SHREW1 |
AK1 | NM_000476 | 腺苷酸激酶1 |
AK5 | NM_012093 | 腺苷酸激酶5同种型2 |
AKAP11 | NM_016248 | A-激酶锚定蛋白11同种型1 |
AKAP13 | NM_006738 | A-激酶锚定蛋白13同种型1 |
AKAP6 | NM_004274 | A-激酶锚定蛋白6 |
AKAP9 | NM_005751 | A-激酶锚定蛋白9同种型2 |
AKR1D1 | NM_005989 | 醛-酮还原酶家族1,成员D1 |
AKR7A2 | NM_003689 | 醛-酮还原酶家族7,成员A2 |
AKT3 | NM_005465 | v-akt鼠胸腺瘤病毒癌基因同系物3 |
ALDH1A3 | NM_000693 | 醛脱氢酶1A3 |
ALDH3A2 | NM_000382 | 醛脱氢酶3A2同种型2 |
ALDH3B1 | NM_000694 | 醛脱氢酶3B1同种型a |
ALDH8A1 | NM_022568 | 醛脱氢酶8A1同种型1 |
ALDH9A1 | NM_000696 | 醛脱氢酶9A1 |
ALDOC | NM_005165 | 果糖-二磷酸醛缩酶C |
ALKBH4 | NM_017621 | 假定蛋白LOC54784 |
ALKBH5 | NM_017758 | 假定蛋白LOC54890 |
ALOX15B | NM_001141 | 花生四烯酸15-脂氧合酶,第二型 |
ALPK1 | NM_025144 | α-激酶1 |
ALPP | NM_001632 | 胎盘碱性磷酸酶前体 |
ALS2CL | NM_147129 | ALS2C-末端样同种型1 |
ALS2CR13 | NM_173511 | 肌萎缩性侧索硬化2(幼年) |
ALS2CR15 | NM_138468 | Ica69相关蛋白质 |
ALS2CR19 | NM_057177 | 肌萎缩性侧索硬化2(幼年) |
ALX4 | NM_021926 | 无芒样同源框4 |
AMELX | NM_001142 | 釉质形成素(X染色体)同种型1前体 |
AMELY | NM_001143 | 釉质形成素(Y染色体)前体 |
AMID | NM_032797 | 细胞凋亡-诱导因子(AIF)样蛋白 |
AMIGO2 | NM_181847 | 两性霉素(amphoterin)诱导的基因2 |
AMMECR1 | NM_001025580 | AMMECR1蛋白质同种型2 |
AMOTL1 | NM_130847 | 血管动蛋白样蛋白1 |
AMPD2 | NM_004037 | 腺苷酸一磷酸脱氨酶2(同种型L) |
AMPD3 | NM_000480 | 红细胞腺苷一磷酸脱氨酶 |
AMZ1 | NM_133463 | 古梅斯蛋白-1 |
ANAPC11 | NM_001002244 | APC11后期促进复合体亚基11 |
ANGEL1 | NM_015305 | angel同系物1 |
ANGEL2 | NM_144567 | LOC90806蛋白质 |
ANGPTL7 | NM_021146 | 血管生成素样蛋白7 |
ANK2 | NM_001148 | 锚蛋白2同种型1 |
ANKFY1 | NM_016376 | 含锚蛋白重复和FYVE结构域1 |
ANKH | NM_054027 | 关节强硬,进行性同系物 |
ANKK1 | NM_178510 | 含锚蛋白重复和激酶结构域1 |
ANKRA2 | NM_023039 | 锚蛋白重复,家族A(RFXANK样蛋白),2 |
ANKRD10 | NM_017664 | 锚蛋白重复结构域10 |
ANKRD11 | NM_013275 | 锚蛋白重复结构域11 |
ANKRD12 | NM_015208 | 锚蛋白重复结构域12 |
ANKRD13C | NM_030816 | 锚蛋白重复结构域13C |
ANKRD15 | NM_015158 | 锚蛋白重复结构域蛋白质15同种型a |
ANKRD16 | NM_019046 | 锚蛋白重复结构域16同种型a |
ANKRD25 | NM_015493 | 锚蛋白重复结构域25 |
ANKRD28 | NM_015199 | 锚蛋白重复结构域28 |
ANKRD29 | NM_173505 | 锚蛋白重复结构域29 |
ANKRD38 | NM_181712 | 锚蛋白重复结构域38 |
ANKRD42 | NM_182603 | 锚蛋白重复结构域42 |
ANKRD44 | NM_153697 | 假定蛋白DKFZp434D2328 |
ANKRD50 | NM_020337 | 假定蛋白LOC57182 |
ANKRD9 | NM_152326 | 锚蛋白重复结构域9 |
ANKS1A | NM_015245 | 锚蛋白重复和不育α模体结构域 |
ANKS1B | NM_020140 | cajalin2同种型c |
ANKS4B | NM_145865 | 含harmonin-相互作用锚蛋白重复 |
ANTXR1 | NM_018153 | 肿瘤内皮标志物8同种型3前体 |
ANUBL1 | NM_174890 | AN1,遍在蛋白样蛋白,同系物 |
ANXA13 | NM_001003954 | 膜联蛋白A13同种型b |
ANXA7 | NM_001156 | 膜联蛋白VII同种型1 |
AOF1 | NM_153042 | 胺氧化酶(含黄素)结构域1 |
AP1G1 | NM_001030007 | 衔接因子相关蛋白复合体1,γ1 |
AP1S2 | NM_003916 | 衔接因子相关蛋白复合体1σ2 |
AP2B1 | NM_001030006 | 衔接因子相关蛋白复合体2,β1 |
AP3D1 | NM_003938 | 衔接因子相关蛋白复合体3,δ1 |
AP4S1 | NM_007077 | 衔接因子相关蛋白复合体4,σ1 |
APBB2 | NM_173075 | 淀粉状蛋白βA4前体蛋白质结合, |
APBB3 | NM_006051 | 淀粉状蛋白β前体蛋白质结合,家族 |
APC | NM_000038 | 腺瘤性结肠息肉 |
APCDD1 | NM_153000 | 腺瘤性结肠息肉下调节的1 |
APEX1 | NM_001641 | APEX核酸酶 |
API5 | NM_006595 | 细胞凋亡抑制剂5 |
APOBEC3A | NM_145699 | Phorbolin 1 |
APOBEC3F | NM_001006666 | 载脂蛋白B mRNA编辑酶,催化 |
APOBEC4 | NM_203454 | 载脂蛋白B mRNA编辑酶,催化 |
APOL1 | NM_003661 | 载脂蛋白L1同种型a前体 |
APOLD1 | NM_030817 | 假定蛋白LOC81575 |
APP | NM_000484 | 淀粉状蛋白βA4蛋白质前体,同种型a |
APPBP2 | NM_006380 | 淀粉状蛋白β前体蛋白质结合蛋白质 |
APPL | NM_012096 | 含pH结构域,PTB结构域衔接蛋白 |
APXL2 | NM_133456 | 顶端蛋白2 |
AQP4 | NM_001650 | 水通道蛋白4同种型a |
AQP9 | NM_020980 | 水通道蛋白9 |
ARCN1 | NM_001655 | 古蛋白(Archain) |
ARFIP2 | NM_012402 | ADP-核糖基化因子相互作用蛋白质2 |
ARGFX | NM_001012659 | 假定蛋白LOC503582 |
ARHGAP1 | NM_004308 | Rho GTP酶激活蛋白1 |
ARHGAP12 | NM_018287 | Rho GTP酶激活蛋白12 |
ARHGAP18 | NM_033515 | Rho GTP酶激活蛋白18 |
ARHGAP24 | NM_031305 | Rho GTP酶激活蛋白24 |
ARHGAP26 | NM_015071 | 与灶相关的GTP酶调节物 |
ARHGAP5 | NM_001030055 | Rho GTP酶激活蛋白5同种型a |
ARHGAP6 | NM_006125 | Rho GTP酶激活蛋白6同种型3 |
ARHGEF10 | NM_014629 | Rho乌苷酸交换因子10 |
ARHGEF11 | NM_014784 | Rho乌苷酸交换因子(GEF)11 |
ARHGEF18 | NM_015318 | Rho-特异性乌嘌呤核苷酸交换因子 |
ARHGEF3 | NM_019555 | Rho鸟苷酸交换因子3 |
ARHGEF6 | NM_004840 | Rac/Cdc42乌苷酸交换因子6 |
ARHGEF7 | NM_003899 | Rho乌苷酸交换因子7同种型 |
ARID4A | NM_002892 | 成视网膜细胞瘤-结合蛋白1同种型I |
ARID4B | NM_016374 | AT丰富相互作用结构域4B同种型1 |
ARL1 | NM_001177 | ADP-核糖基化因子样蛋白1 |
ARL10 | NM_173664 | ADP-核糖基化因子样蛋白10 |
ARL13B | NM_144996 | ADP-核糖基化因子样蛋白2样蛋白1同种型2 |
ARL4A | NM_005738 | ADP-核糖基化因子样蛋白4A |
ARL4C | NM_005737 | ADP-核糖基化因子样蛋白4C |
ARMC8 | NM_014154 | 含armadillo重复单位8同种型1 |
ARNT2 | NM_014862 | 芳烃受体核易位蛋白 |
ARPP-19 | NM_006628 | 环AMP磷蛋白,19Kd |
ARPP-21 | NM_001025068 | 环AMP调节的磷蛋白,21kD |
ARRDC1 | NM_152285 | 含视紫红质抑制蛋白结构域1 |
ARSB | NM_000046 | 芳基硫酸酯酶B同种型1前体 |
ARSD | NM_001669 | 芳基硫酸酯酶D同种型a前体 |
ARSJ | NM_024590 | 芳基硫酸酯酶J |
ARTS-1 | NM_016442 | 1型肿瘤坏死因子受体脱落 |
ASAH1 | NM_004315 | N-酰基鞘氨醇酰胺水解酶(酸性 |
ASAH3L | NM_001010887 | N-酰基鞘氨醇酰胺水解酶3样蛋白 |
ASAHL | NM_014435 | N-酰基鞘氨醇酰胺水解酶样蛋白蛋白质 |
ASB1 | NM_016114 | 含锚蛋白重复和SOCS盒蛋白质 |
ASB13 | NM_024701 | 含锚蛋白重复和SOCS盒蛋白质 |
ASB5 | NM_080874 | 含锚蛋白重复和SOCS盒蛋白质 |
ASB6 | NM_017873 | 含锚蛋白重复和SOCS盒6同种型 |
ASB7 | NM_198243 | 含锚蛋白重复和SOCS盒蛋白质7 |
ASB9 | NM_001031739 | 含锚蛋白重复和SOCS盒9同种型 |
ASCIZ | NM_015251 | ATM/ATR-底物Chk2-相互作用Zn2+-指 |
ASF1A | NM_014034 | ASF1抗沉默功能1同系物A |
ASL | NM_000048 | 精氨琥珀酸裂合酶同种型1 |
ASTN | NM_004319 | 星触蛋白同种型1 |
ATAD2 | NM_014109 | 含双AAA结构域的蛋白质 |
ATF5 | NM_012068 | 转录激活因子5 |
ATF7IP2 | NM_024997 | 转录激活因子7相互作用 |
ATG10 | NM_031482 | APG10自噬10样蛋白 |
ATG12 | NM_004707 | APG12自噬12样蛋白 |
ATG16L1 | NM_017974 | APG16自噬16样蛋白同种型2 |
ATG4B | NM_013325 | APG4自噬4同系物B同种型a |
ATG5 | NM_004849 | APG5自噬5样蛋白 |
ATM | NM_000051 | 共济失调-毛细血管扩张突变蛋白质同种型1 |
ATOH8 | NM_032827 | atonal同系物8 |
ATP11A | NM_015205 | ATP酶,VI类,11A型同种型a |
ATP12A | NM_001676 | ATP酶,H+/K+转运,非胃的,α |
ATP1A2 | NM_000702 | Na+/K+-ATP酶α2亚基蛋白原 |
ATP2B1 | NM_001001323 | 质膜钙ATP酶1同种型1a |
ATP2B2 | NM_001001331 | 质膜钙ATP酶2同种型a |
ATP6V0E | NM_003945 | ATP酶,H+转运,溶酶体,V0亚基 |
ATP6V1D | NM_015994 | H(+)-转运二区室ATP酶 |
ATP7B | NM_000053 | ATP酶,Cu++转运,β多肽 |
ATP8B4 | NM_024837 | ATP酶类I类型8B成员4 |
ATP9A | NM_006045 | ATP酶,类II,类型9A |
ATPAF1 | NM_022745 | ATP合酶线粒体F1复合体组装 |
ATPBD1B | NM_018066 | ATP结合结构域1家族,成员B |
ATPBD1C | NM_016301 | ATP结合结构域1家族,成员C |
ATRNL1 | NM_207303 | 引蛋白样蛋白1 |
ATXN1 | NM_000332 | 共济失调蛋白1 |
ATXN3 | NM_001024631 | 共济失调蛋白3同种型3 |
B2M | NM_004048 | β-2-微球蛋白前体 |
B3GALNT2 | NM_152490 | UDP-GalNAc:βGlcNAcβ |
B3GALT2 | NM_003783 | UDP-Gal:βGlcNAcβ |
B3GALT5 | NM_006057 | UDP-Gal:βGlcNAcβ |
B3GNT5 | NM_032047 | β-1,3-N-乙酰葡糖胺转移酶bGnT-5 |
B3Gn-T6 | NM_138706 | β-1,3-N-乙酰葡糖胺转移酶 |
B4GALT2 | NM_001005417 | UDP-Gal:βGlcNAcβ1,4- |
B4GALT5 | NM_004776 | UDP-Gal:βGlcNAcβ1,4- |
B4GALT6 | NM_004775 | UDP-Gal:βGlcNAcβ1,4- |
BAALC | NM_001024372 | 脑和急性白血病,细胞质同种型2 |
BACH2 | NM_021813 | BTB和CNC同源物1,碱性亮氨酸拉链 |
BAG1 | NM_004323 | BCL2相关抗死亡基因同种型1L |
BAG5 | NM_001015048 | BCL2相关抗死亡基因5同种型b |
BAGE | NM_001187 | B黑素瘤抗原 |
BAGE4 | NM_181704 | B黑素瘤抗原家族,成员4 |
BAHD1 | NM_014952 | 含溴邻接同源物结构域1 |
BAMBI | NM_012342 | BMP和激活素膜结合抑制剂 |
BAPX1 | NM_001189 | 风笛同源框1 |
BCAP29 | NM_001008405 | B细胞受体相关蛋白BAP29同种型 |
BCAS1 | NM_003657 | 乳腺癌扩增序列1 |
BCAS2 | NM_005872 | 乳腺癌扩增序列2 |
BCL11B | NM_022898 | B细胞CLL/淋巴瘤11B同种型2 |
BCL2 | NM_000633 | B细胞淋巴瘤蛋白质2α同种型 |
BCL2L11 | NM_006538 | BCL2样11同种型6 |
BCL2L2 | NM_004050 | BCL2样2蛋白质 |
BCL6 | NM_001706 | B细胞淋巴瘤6蛋白质 |
BCL6B | NM_181844 | B细胞CLL/淋巴瘤6,成员B(锌指 |
BDH2 | NM_020139 | 3-羟基丁酸脱氢酶,类型2 |
BET1 | NM_005868 | 转运早期阻断1 |
BET1L | NM_016526 | 转运早期阻断1同系物(S. |
BFAR | NM_016561 | 细胞凋亡调节物 |
BHLHB3 | NM_030762 | 含碱性螺旋-环-螺旋结构域,类 |
BHMT2 | NM_017614 | 甜菜碱高半胱氨酸转甲基酶2 |
BICD2 | NM_001003800 | 二尾D同系物2同种型1 |
BIRC1 | NM_004536 | 含杆状病毒IAP重复1 |
BIRC4 | NM_001167 | 含杆状病毒IAP重复蛋白质4 |
BIRC4BP | NM_017523 | XIAP相关因子-1同种型1 |
BIRC5 | NM_001012270 | 含杆状病毒IAP重复蛋白质5 |
BLZF1 | NM_003666 | 碱性亮氨酸拉链核因子1 |
BMP8B | NM_001720 | 骨形态发生蛋白8B前蛋白原 |
BMPR2 | NM_001204 | 骨形态发生蛋白受体类型II |
BMX | NM_001721 | BMX非受体酪氨酸激酶 |
BNC2 | NM_017637 | 碱核蛋白2 |
BNIP2 | NM_004330 | BCL2/腺病毒E1B 19kD相互作用蛋白质2 |
BNIP3L | NM_004331 | BCL2/腺病毒E1B 19kD-相互作用蛋白质 |
BNIPL | NM_138279 | BCL2/腺病毒E1B 19kD相互作用蛋白质 |
BPGM | NM_001724 | 2,3-二磷酸甘油酸变位酶 |
BPHL | NM_004332 | 联苯水解酶样蛋白 |
BPNT1 | NM_006085 | 3′(2′),5′-二磷酸核苷酸酶1 |
BRCA1 | NM_007294 | 乳癌1,早发同种型1 |
BRCA2 | NM_000059 | 乳癌2,早发 |
BRD1 | NM_014577 | 含布罗莫结构域(bromodomain)蛋白质1 |
BRMS1L | NM_032352 | 乳癌转移抑制蛋白1样蛋白 |
BRWD1 | NM_001007246 | 含布罗莫结构域和WD重复结构域1 |
BSCL2 | NM_032667 | Seipin |
BSDC1 | NM_018045 | 含BSD结构域1 |
BTBD10 | NM_032320 | K+通道四聚化蛋白质 |
BTBD15 | NM_014155 | 含BTB(POZ)结构域15 |
BTBD7 | NM_001002860 | 含BTB(P0Z)结构域7同种型1 |
BTG1 | NM_001731 | B细胞易位蛋白质1 |
BTG3 | NM_006806 | B细胞易位基因3 |
BTN1A1 | NM_001732 | 嗜乳脂蛋白,亚家族1,成员A1 |
BTN3A1 | NM_007048 | 嗜乳脂蛋白,亚家族3,成员A1 |
BTN3A2 | NM_007047 | 嗜乳脂蛋白,亚家族3,成员A2前体 |
BUB1 | NM_004336 | 不被苯并吡唑抑制的BUB1出芽1 |
BVES | NM_007073 | 血管心外膜物 |
C10orf104 | NM_173473 | 假定蛋白LOC119504 |
C10orf114 | NM_001010911 | 假定蛋白LOC399726 |
C10orf118 | NM_018017 | CTCL肿瘤抗原L14-2 |
C10orf129 | NM_207321 | 假定蛋白LOC142827 |
C10orf137 | NM_015608 | 红细胞分化相关因子1 |
C10orf22 | NM_032804 | 假定蛋白LOC84890 |
C10orf42 | NM_138357 | 假定蛋白LOC90550 |
C10orf46 | NM_153810 | 假定蛋白LOC143384 |
C10orf54 | NM_022153 | 假定蛋白LOC64115 |
C10orf57 | NM_025125 | 假定蛋白LOC80195 |
C10orf58 | NM_032333 | 假定蛋白LOC84293 |
C10orf72 | NM_144984 | 假定蛋白LOC196740同种型2 |
C10orf76 | NM_024541 | 假定蛋白LOC79591 |
C10orf78 | NM_001002759 | 假定蛋白LOC119392同种型a |
C10orf85 | NM_001012711 | 假定蛋白LOC404216 |
C10orf96 | NM_198515 | 假定蛋白LOC374355 |
C10orf97 | NM_024948 | 10号染色体开放阅读框97 |
C11orf1 | NM_022761 | 假定蛋白LOC64776 |
C11orf30 | NM_020193 | EMSY蛋白质 |
C11orf38 | NM_212555 | 假定蛋白LOC399967 |
C11orf49 | NM_001003678 | 假定蛋白LOC79096同种型4 |
C11orf54 | NM_014039 | 假定蛋白LOC28970 |
C11orf55 | NM_207428 | 假定蛋白LOC399879 |
C11orf63 | NM_199124 | 假定蛋白LOC79864同种型2 |
C11orf69 | NM_152314 | 假定蛋白LOC120196 |
C12orf31 | NM_032338 | 假定蛋白LOC84298 |
C12orf36 | NM_182558 | 假定蛋白LOC283422 |
C12orf44 | NM_021934 | 假定蛋白LOC60673 |
C12orf49 | NM_024738 | 假定蛋白LOC79794 |
C12orf53 | NM_153685 | 假定蛋白LOC196500 |
C13orf1 | NM_020456 | 假定蛋白LOC57213 |
C14orf101 | NM_017799 | 假定蛋白LOC54916 |
C14orf103 | NM_018036 | 假定蛋白LOC55102 |
C14orf105 | NM_018168 | 假定蛋白LOC55195 |
C14orf108 | NM_018229 | 假定蛋白LOC55745 |
C14orf111 | NM_015962 | 假定蛋白LOC51077 |
C14orf119 | NM_017924 | 14号染色体开放阅读框119 |
C14orf126 | NM_080664 | 假定蛋白LOC112487 |
C14orf129 | NM_016472 | 假定蛋白LOC51527 |
C14orf133 | NM_022067 | 假定蛋白LOC63894 |
C14orf138 | NM_024558 | 假定蛋白LOC79609 |
C14orf143 | NM_145231 | 假定蛋白LOC90141 |
C 14orf145 | NM_152446 | 14号染色体开放阅读框145 |
C14orf150 | NM_001008726 | 假定蛋白LOC112840 |
C14orf153 | NM_032374 | 假定蛋白LOC84334 |
C14orf24 | NM_173607 | 假定蛋白LOC283635 |
C14orf28 | NM_001017923 | 假定蛋白LOC122525 |
C14orf32 | NM_144578 | MAPK-相互作用和纺锤体稳定性 |
C14orf43 | NM_194278 | 假定蛋白LOC91748 |
C14orf44 | NM_152445 | 假定蛋白LOC145483 |
C15orf17 | NM_020447 | 假定蛋白LOC57184 |
C15orf20 | NM_025049 | DNA解旋酶同系物PIF1 |
C15orf32 | NM_153040 | 假定蛋白LOC145858 |
C15orf40 | NM_144597 | 假定蛋白LOC123207 |
C15orf41 | NM_032499 | 假定蛋白LOC84529 |
C16orf28 | NM_023076 | 假定蛋白LOC65259 |
C16orf34 | NM_144570 | 染色体16开放阅读框34 |
C16orf45 | NM_033201 | 假定蛋白LOC89927 |
C16orf54 | NM_175900 | 假定蛋白LOC283897 |
C16orf58 | NM_022744 | 假定蛋白LOC64755 |
C16orf59 | NM_025108 | 假定蛋白LOC80178 |
C17orf27 | NM_020914 | 染色体17开放阅读框27 |
C17orf37 | NM_032339 | 染色体17开放阅读框37 |
C17orf39 | NM_024052 | 假定蛋白LOC79018 |
C17orf40 | NM_018428 | 肝细胞癌相关抗原66 |
C17orf53 | NM_024032 | 假定蛋白LOC78995 |
C17orf62 | NM_001033046 | 假定蛋白LOC79415 |
C17orf69 | NM_152466 | 假定蛋白LOC147081 |
C17orf73 | NM_017928 | 假定蛋白LOC55018 |
C17orf77 | NM_152460 | 假定蛋白LOC146723 |
C18orf1 | NM_001003674 | 假定蛋白LOC753同种型γ1 |
C18orf16 | NM_153010 | 假定蛋白LOC147429 |
C18orf17 | NM_153211 | 假定蛋白LOC125488 |
C18orf19 | NM_152352 | 假定蛋白LOC125228 |
C18orf25 | NM_001008239 | 染色体18开放阅读框25同种型b |
C18orf26 | NM_173629 | 假定蛋白LOC284254 |
C18orf45 | NM_032933 | 假定蛋白LOC85019 |
C19orf12 | NM_031448 | 假定蛋白LOC83636同种型2 |
C19orf2 | NM_003796 | RPB5-介导蛋白质同种型a |
C19orf20 | NM_033513 | 基因陷阱ROSA b-geo 22 |
C19orf31 | NM_001014373 | 假定蛋白LOC404664 |
C1GALT1 | NM_020156 | 核心1合酶, |
C1orf107 | NM_014388 | 假定蛋白LOC27042 |
C1orf108 | NM_024595 | 假定蛋白LOC79647 |
C1orf110 | NM_178550 | 假定蛋白LOC339512 |
C1orf116 | NM_023938 | 雄激素特异性调节的蛋白质 |
C1orf130 | NM_001010980 | 假定蛋白LOC400746 |
C1orf135 | NM_024037 | 假定蛋白LOC79000 |
C1orf138 | NM_001025493 | 假定蛋白LOC574406 |
C1orf150 | NM_145278 | 假定蛋白LOC148823 |
C1orf151 | NM_001032363 | 染色体1开放阅读框151蛋白质 |
C1orf155 | NM_033319 | 假定蛋白LOC91687 |
C1orf171 | NM_138467 | 假定蛋白LOC127253 |
C1orf173 | NM_001002912 | 假定蛋白LOC127254 |
C1orf176 | NM_022774 | 假定蛋白LOC64789 |
C1orf178 | NM_001010922 | 促凋亡Bcl-2蛋白质同种型a |
C1orf183 | NM_019099 | 假定蛋白LOC55924同种型1 |
C1orf19 | NM_052965 | 假定蛋白LOC116461 |
C1orf21 | NM_030806 | 染色体1开放阅读框21 |
C1orf24 | NM_022083 | niban蛋白质同种型1 |
C1orf26 | NM_017673 | 假定蛋白LOC54823 |
C1orf32 | NM_199351 | 假定蛋白LOC387597 |
C1orf33 | NM_016183 | 核糖体蛋白质P0样蛋白质 |
C1orf42 | NM_019060 | 染色体1开放阅读框42 |
C1orf63 | NM_020317 | 假定蛋白LOC57035同种型2 |
C1orf69 | NM_001010867 | 假定蛋白LOC200205 |
C1orf76 | NM_173509 | 假定蛋白MGC16664 |
C1orf83 | NM_153035 | 假定蛋白LOC127428 |
C1orf84 | NM_182518 | RP11-506B15.1蛋白质同种型3 |
C1orf9 | NM_014283 | 染色体1开放阅读框9蛋白质 |
C1orf96 | NM_145257 | 假定蛋白LOC126731 |
C1QDC1 | NM_001002259 | 含C1q结构域1同种型1 |
C1QTNF7 | NM_031911 | C1q和肿瘤坏死因子相关蛋白7 |
C20orf103 | NM_012261 | 20号染色体开放阅读框103前体 |
C20orf108 | NM_080821 | 假定蛋白LOC116151 |
C20orf112 | NM_080616 | 假定蛋白LOC140688 |
C20orf117 | NM_080627 | 假定蛋白LOC140710同种型1 |
C20orf12 | NM_018152 | 假定蛋白LOC55184 |
C20orf121 | NM_024331 | 假定蛋白LOC79183 |
C20orf133 | NM_001033086 | 假定蛋白LOC140733同种型1 |
C20orf161 | NM_033421 | 分选微管连接蛋白21同种型a |
C20orf172 | NM_024918 | 假定蛋白LOC79980 |
C20orf175 | NM_080829 | 假定蛋白LOC140876 |
C20orf177 | NM_022106 | 假定蛋白LOC63939 |
C20orf29 | NM_018347 | 假定蛋白LOC55317 |
C20orf43 | NM_016407 | 假定蛋白LOC51507 |
C20orf51 | NM_022099 | 假定蛋白LOC63930 |
C21orf25 | NM_199050 | 假定蛋白LOC25966 |
C21orf49 | NM_001006116 | 假定蛋白LOC54067 |
C21orf55 | NM_017833 | 假定蛋白LOC54943 |
C21orf58 | NM_058180 | 假定蛋白LOC54058同种型1 |
C21orf62 | NM_019596 | 假定蛋白LOC56245 |
C21orf63 | NM_058187 | 21号染色体开放阅读框63 |
C21orf66 | NM_145328 | GC丰富序列DNA结合因子候选物 |
C21orf77 | NM_018277 | 假定蛋白LOC55264 |
C22of9 | NM_001009880 | 假定蛋白LOC23313同种型b |
C2orf13 | NM_173545 | 假定蛋白LOC200558 |
C2orf15 | NM_144706 | 假定蛋白LOC150590 |
C2orf17 | NM_024293 | 假定蛋白LOC79137 |
C2orf19 | NM_001024676 | 2号染色体开放阅读框19 |
C2orf26 | NM_023016 | 假定蛋白LOC65124 |
C2orf28 | NM_016085 | 细胞凋亡相关蛋白3同种型a |
C2orf3 | NM_003203 | 假定蛋白LOC6936 |
C3orf1 | NM_016589 | 假定蛋白LOC51300 |
C3orf21 | NM_152531 | 假定蛋白LOC152002 |
C3orf27 | NM_007354 | 假定的GR6蛋白质 |
C3orf34 | NM_032898 | 假定蛋白LOC84984 |
C3orf35 | NM_178342 | AP20区蛋白质同种型E |
C3orf38 | NM_173824 | 假定蛋白LOC285237 |
C3orf52 | NM_024616 | TPA-诱导的跨膜蛋白质 |
C3orf56 | NM_001007534 | 假定蛋白LOC285311 |
C3orf62 | NM_198562 | 假定蛋白LOC375341 |
C3orf63 | NM_015224 | 成视网膜细胞瘤相关蛋白140 |
C3orf64 | NM_173654 | AER61糖基转移酶 |
C3orf9 | NM_020231 | 假定蛋白LOC56983 |
C4orf12 | NM_205857 | FBI4蛋白质 |
C4orf13 | NM_001029998 | 假定蛋白LOC84068同种型b |
C4orf15 | NM_024511 | 假定蛋白LOC79441 |
C5 | NM_001735 | 补体成分5 |
C5orf22 | NM_018356 | 假定蛋白LOC55322 |
C6orf120 | NM_001029863 | 假定蛋白LOC387263 |
C6orf128 | NM_145316 | 假定蛋白LOC221468 |
C6orf134 | NM_024909 | 假定蛋白LOC79969同种型2 |
C6orf139 | NM_018132 | 假定蛋白LOC55166 |
C6orf15 | NM_014070 | STG蛋白质 |
C6orf151 | NM_152551 | U11/U12snRNP 48K |
C6orf201 | NM_206834 | 假定蛋白LOC404220 |
C6orf208 | NM_025002 | 假定蛋白LOC80069 |
C6orf35 | NM_018452 | 假定蛋白LOC55836 |
C6orf49 | NM_013397 | 过表达的乳腺肿瘤蛋白质 |
C6orf59 | NM_024929 | 假定蛋白LOC79992 |
C6orf69 | NM_173562 | 假定蛋白LOC222658 |
C6orf71 | NM_203395 | 6号染色体开放阅读框71 |
C6orf85 | NM_021945 | 离子转运蛋白质 |
C6orf96 | NM_017909 | 假定蛋白LOC55005 |
C6orf97 | NM_025059 | 假定蛋白LOC80129 |
C7 | NM_000587 | 补体成分7前体 |
C7orf19 | NM_032831 | 假定蛋白LOC80228 |
C7orf29 | NM_138434 | 假定蛋白LOC113763 |
C8A | NM_000562 | 补体成分8,α多肽 |
C8orf1 | NM_004337 | 假定蛋白LOC734 |
C8orf30A | NM_016458 | 脑蛋白质16 |
C8orf37 | NM_177965 | 假定蛋白LOC157657 |
C8orf38 | NM_152416 | 假定蛋白LOC137682 |
C8orf44 | NM_019607 | 假定蛋白LOC56260 |
C8orf45 | NM_173518 | 假定蛋白LOC157777 |
C8orf49 | NM_001031839 | 假定蛋白LOC606553 |
C9orf100 | NM_001031728 | 假定蛋白LOC84904同种型1 |
C9orf102 | NM_020207 | 牵张应答蛋白质278同种型a |
C9orf140 | NM_178448 | 假定蛋白LOC89958 |
C9orf40 | NM_017998 | 假定蛋白LOC55071 |
C9orf5 | NM_032012 | 假定蛋白LOC23731 |
C9orf64 | NM_032307 | 假定蛋白LOC84267 |
C9orf66 | NM_152569 | 假定蛋白LOC157983 |
C9orf72 | NM_145005 | 假定蛋白LOC203228同种型b |
C9orf77 | NM_001025780 | 9号染色体开放阅读框77同种型2 |
C9orf78 | NM_016482 | 9号染色体开放阅读框78同种型1 |
C9orf80 | NM_021218 | 假定蛋白LOC58493 |
C9orf82 | NM_024828 | 假定蛋白LOC79886 |
C9orf85 | NM_182505 | 假定蛋白LOC138241同种型a |
C9orf88 | NM_022833 | 假定蛋白LOC64855 |
CA10 | NM_020178 | 碳酸酐酶X |
CA8 | NM_004056 | 碳酸酐酶VIII |
CABLES1 | NM_138375 | Cdk5和Ab1酶底物1 |
CABP2 | NM_016366 | 钙结合蛋白2同种型1 |
CACNG4 | NM_014405 | 电压依赖性钙通道γ-4 |
CALCOCO2 | NM_005831 | 钙结合和卷曲螺旋结构域2 |
CALD1 | NM_004342 | 钙调结合蛋白1同种型2 |
CALN1 | NM_001017440 | calneuronl |
CAMK1D | NM_020397 | 钙/钙调蛋白依赖的蛋白质激酶ID |
CAMK2D | NM_172127 | 钙/钙调蛋白依赖的蛋白质激酶II |
CAMK2G | NM_001222 | 钙/钙调蛋白依赖的蛋白质激酶II |
CAMK2N1 | NM_018584 | 钙/钙调蛋白依赖的蛋白质激酶II |
CAMK2N2 | NM_033259 | CaM-KIl抑制剂y蛋白质 |
CAMKK1 | NM_032294 | 钙/钙调蛋白依赖的蛋白质激酶1 |
CAMSAP1 | NM_015447 | 钙调蛋白调节的血影蛋白相关蛋白 |
CAMSAP1L1 | NM_203459 | 钙调蛋白调节的血影蛋白相关蛋白 |
CAMTA1 | NM_015215 | 钙调蛋白结合转录激活物1 |
CAMTA2 | NM_015099 | 钙调蛋白结合转录激活物2 |
CANX | NM_001024649 | 钙联接蛋白前体 |
CAPN13 | NM_144575 | 钙蛋白酶13 |
CAPN3 | NM_212464 | 钙蛋白酶3同种型g |
CAPN7 | NM_014296 | 钙蛋白酶7 |
CAPS2 | NM_032606 | 钙磷蛋白2 |
CARD10 | NM_014550 | 胱天蛋白酶募集域蛋白质10 |
CARD14 | NM_052819 | 胱天蛋白酶募集域蛋白质14同种型2 |
CARD4 | NM_006092 | 胱天蛋白酶募集域家族,成员4 |
CARD8 | NM_014959 | 胱天蛋白酶募集域家族,成员8 |
CARKL | NM_013276 | 碳水化合物激酶样蛋白 |
CASC3 | NM_007359 | 癌症易感性候选物3 |
CASC4 | NM_138423 | 癌症易感性候选物4同种型a |
CASP2 | NM_032982 | 胱天蛋白酶2同种型1前蛋白原 |
CASP6 | NM_001226 | 胱天蛋白酶6同种型α前蛋白原 |
CASP7 | NM_001227 | 胱天蛋白酶7同种型α前体 |
CASP8 | NM_001228 | 胱天蛋白酶8同种型A |
CATSPER2 | NM_172097 | 精子相关阳离子通道2同种型4 |
CAV1 | NM_001753 | 小窝蛋白1 |
CAV2 | NM_001233 | 小窝蛋白2同种型a和b |
CBX1 | NM_006807 | 色素框同系物1(HP1β同系物,果蝇) |
CBX2 | NM_005189 | 色素框同系物2同种型1 |
CBX7 | NM_175709 | 色素框同系物7 |
CC2D1A | NM_017721 | 假定的NFkB活化蛋白质 |
CC2D1B | NM_032449 | 含卷曲螺旋和C2结构域1B |
CCBE1 | NM_133459 | 胶原和钙结合EGF结构域1 |
CCBL1 | NM_004059 | 细胞质半胱氨酸缀合-β裂合酶 |
CCDC14 | NM_022757 | 含卷曲螺旋结构域14 |
CCDC15 | NM_025004 | 含卷曲螺旋结构域15 |
CCDC16 | NM_052857 | 含卷曲螺旋结构域16 |
CCDC25 | NM_001031708 | 含卷曲螺旋结构域25同种型1 |
CCDC43 | NM_144609 | 假定蛋白LOC124808 |
CCDC52 | NM_144718 | 假定蛋白LOC152185 |
CCDC6 | NM_005436 | 含卷曲螺旋结构域6 |
CCDC68 | NM_025214 | CTCL肿瘤抗原se57-1 |
CCDC69 | NM_015621 | 假定蛋白LOC26112 |
CCL1 | NM_002981 | 小可诱导细胞因子A1前体 |
CCL28 | NM_019846 | 小可诱导细胞因子A28前体 |
CCL5 | NM_002985 | 小可诱导细胞因子A5前体 |
CCND1 | NM_053056 | 细胞周期蛋白D1 |
CCND2 | NM_001759 | 细胞周期蛋白D2 |
CCNE2 | NM_057735 | 细胞周期蛋白E2同种型2 |
CCNF | NM_001761 | 细胞周期蛋白F |
CCNG2 | NM_004354 | 细胞周期蛋白G2 |
CCNJ | NM_019084 | 细胞周期蛋白J |
CCNT2 | NM_001241 | 细胞周期蛋白T2同种型a |
CCR6 | NM_004367 | 趋化因子(C-C模体)受体6 |
CCRL1 | NM_016557 | 趋化因子(C-C模体)受体样蛋白1 |
CCS | NM_005125 | 用于超氧化物歧化酶的铜伴侣蛋白 |
CD200 | NM_001004196 | CD200抗原同种型b |
CD28 | NM_006139 | CD28抗原 |
CD300LG | NM_145273 | 触发髓样细胞上表达受体 |
CD36 | NM_000072 | CD36抗原 |
CD38 | NM_001775 | CD38抗原 |
CD46 | NM_002389 | CD46抗原,补体调节蛋白质 |
CD47 | NM_001025079 | CD47分子同种型3前体 |
CD59 | NM_000611 | CD59抗原p18-20 |
CD68 | NM_001251 | CD68抗原 |
CD69 | NM_001781 | CD69抗原(p60,早期T细胞活化 |
CD82 | NM_001024844 | CD82抗原同种型2 |
CD84 | NM_003874 | CD84抗原(白细胞抗原) |
CD96 | NM_005816 | CD96抗原同种型2前体 |
CD99L2 | NM_031462 | CD99抗原样蛋白2同种型E3′-E4′-E3-E4 |
CDAN1 | NM_138477 | codanin 1 |
CDC23 | NM_004661 | 细胞分裂周期蛋白质23 |
CDC37L1 | NM_017913 | 细胞分裂周期37同系物(S |
CDC40 | NM_015891 | 前mRNA剪接因子17 |
CDC42SE1 | NM_020239 | CDC42小效应蛋白1 |
CDCA4 | NM_017955 | 细胞分裂周期相关4 |
CDCA7 | NM_031942 | 细胞分裂周期相关蛋白7同种型 |
CDH20 | NM_031891 | 钙黏着蛋白20,类型2前蛋白原 |
CDK2AP2 | NM_005851 | CDK2相关蛋白2 |
CDK5R1 | NM_003885 | 细胞周期蛋白依赖的激酶5,调节亚基1 |
CDK6 | NM_001259 | 细胞周期蛋白依赖的激酶6 |
CDKN1A | NM_000389 | 细胞周期蛋白依赖的激酶抑制剂1A |
CDT1 | NM_030928 | DNA复制因子 |
CECR6 | NM_031890 | 猫眼综合征染色体区域,候选物6 |
CEECAM1 | NM_016174 | 脑内皮细胞黏着分子1 |
CELSR2 | NM_001408 | 钙黏着蛋白EGF LAG 7次跨膜G-类型受体2 |
CENPF | NM_016343 | 着丝粒蛋白质F(350/400kD) |
CENTA2 | NM_018404 | 半人马蛋白-α2蛋白质 |
CENTB2 | NM_012287 | 半人马蛋白,β2 |
CENTD1 | NM_015230 | 半人马蛋白δ1同种型a |
CEP135 | NM_025009 | 中心体蛋白质4 |
CEP152 | NM_014985 | 假定蛋白LOC22995 |
CEP170 | NM_014812 | 中心体蛋白质170kDa |
CEP27 | NM_018097 | 假定蛋白LOC55142 |
CEP57 | NM_014679 | Translokin |
CEP70 | NM_024491 | 中心体蛋白质70kDa |
CERK | NM_022766 | 神经酰胺激酶同种型a |
CES2 | NM_003869 | 羧酸酯酶2同种型1 |
CETN2 | NM_004344 | 钙牵蛋白 |
CFL2 | NM_021914 | 丝切蛋白2 |
CFLAR | NM_003879 | CASP8和FADD样蛋白细胞凋亡调节物 |
CGNL1 | NM_032866 | 带蛋白样蛋白1 |
CHAF1A | NM_005483 | 染色质组装因子1,亚基A(p150) |
CHD5 | NM_015557 | 克罗莫结构域解旋酶DNA结合蛋白5 |
CHD6 | NM_032221 | 克罗莫结构域解旋酶DNA结合蛋白6 |
CHD9 | NM_025134 | 克罗莫结构域解旋酶DNA结合蛋白9 |
CHES1 | NM_005197 | 检验点抑制蛋白1 |
ChGn | NM_018371 | 软骨素β1,4 |
CHML | NM_001821 | 无脉络膜样Rab护卫蛋白2 |
CHMP4C | NM_152284 | 染色质修饰蛋白4C |
CHRFAM7A | NM_139320 | CHRNA7-FAM7A融合同种型1 |
CHRM2 | NM_000739 | 胆碱能受体,毒蕈碱性2 |
CHRNA5 | NM_000745 | 胆碱能受体,烟碱性,α |
CHRNA7 | NM_000746 | 胆碱能受体,烟碱性,α7 |
CHRNB1 | NM_000747 | 烟碱性乙酰胆碱受体β1亚基 |
CHRNB4 | NM_000750 | 胆碱能受体,烟碱性,β |
CHST6 | NM_021615 | 碳水化合物(N-乙酰葡糖胺6-O) |
CHSY1 | NM_014918 | 碳水化合物(软骨素)合酶1 |
CHURC1 | NM_145165 | 含churchill结构域1 |
CIAPIN1 | NM_020313 | 细胞因子诱导的细胞凋亡抑制剂1 |
CIAS1 | NM_004895 | 隐热蛋白(cryopyrin)同种型a |
CIC | NM_015125 | capicua同系物 |
CIT | NM_007174 | Citron |
CITED4 | NM_133467 | Cbp/p300-相互作用反式激活素,具有 |
CKAP2 | NM_018204 | 细胞骨架相关蛋白2 |
CLASP1 | NM_015282 | CLIP相关蛋白1 |
CLCN6 | NM_001286 | 氯化物通道6同种型C1C-6a |
CLDN11 | NM_005602 | 紧密连接蛋白11 |
CLDN12 | NM_012129 | 紧密连接蛋白12 |
CLDN15 | NM_138429 | 紧密连接蛋白15同种型2 |
CLDN18 | NM_001002026 | 紧密连接蛋白18同种型2 |
CLDN19 | NM_148960 | 紧密连接蛋白19 |
CLDN2 | NM_020384 | 紧密连接蛋白2 |
CLDND1 | NM_019895 | 假定蛋白LOC56650 |
CLEC12B | NM_205852 | 巨噬细胞抗原h |
CLEC2D | NM_001004419 | 破骨细胞抑制性凝集素同种型2 |
CLEC4D | NM_080387 | C-类型凝集素结构域家族4,成员D |
CLIC4 | NM_013943 | 氯化物细胞内通道4 |
CLIC5 | NM_016929 | 氯化物细胞内通道5 |
CLN5 | NM_006493 | 蜡样脂-脂褐素病,神经元5 |
CLN8 | NM_018941 | CLN8蛋白质 |
CLOCK | NM_004898 | Clock |
CLSTN1 | NM_001009566 | 钙同线蛋白1同种型1 |
CLSTN2 | NM_022131 | 钙同线蛋白2 |
CMPK | NM_016308 | 胞苷酸激酶 |
CMTM4 | NM_178818 | 趋化因子样因子超家族4同种型1 |
CMTM6 | NM_017801 | 含CKLF样MARVEL跨膜结构域 |
CNAP1 | NM_014865 | 染色体凝聚相关SMC-相关 |
CNDP2 | NM_018235 | CNDP二肽酶2(金属肽酶M20 |
CNGB3 | NM_019098 | 环核苷酸门控通道β3 |
CNN1 | NM_001299 | 钙调理蛋白1,碱性的,平滑肌 |
CNNM2 | NM_199077 | 细胞周期蛋白M2同种型3 |
CNNM3 | NM_017623 | 细胞周期蛋白M3同种型1 |
CNOT4 | NM_001008225 | CCR4-NOT转录复合物,亚基4 |
CNOT6 | NM_015455 | CCR4-NOT转录复合物,亚基6 |
CNOT7 | NM_013354 | CCR4-NOT转录复合物,亚基7 |
CNR1 | NM_016083 | 中枢大麻素受体同种型a |
CNTF | NM_000614 | 睫状神经营养因子 |
CNTN3 | NM_020872 | 接触蛋白3 |
CNTNAP2 | NM_014141 | 细胞识别分子Caspr2前体 |
CNTNAP3 | NM_033655 | 细胞识别分子CASPR3 |
COBL | NM_015198 | cordon-bleu同系物 |
COG3 | NM_031431 | 高尔基体转运复合体成分3 |
COG7 | NM_153603 | 寡聚高尔基复合体成分7 |
COIL | NM_004645 | 环形体蛋白 |
COL11A2 | NM_080679 | 胶原,类型XI,α2同种型3 |
COL19A1 | NM_001858 | α1类型XIX胶原前体 |
COL4A1 | NM_001845 | α1类型IV胶原前蛋白原 |
COL4A2 | NM_001846 | α2类型IV胶原前蛋白原 |
COL4A3 | NM_000091 | α3类型IV胶原同种型1前体 |
COL4A4 | NM_000092 | α4类型IV胶原前体 |
COL8A2 | NM_005202 | 胶原,类型VIII,α2 |
COLEC12 | NM_030781 | 胶原凝素亚家族成员12同种型II |
COLQ | NM_005677 | 乙酰胆碱酯酶胶原样尾部亚基 |
COMMD10 | NM_016144 | 含COMM结构域10 |
COMMD2 | NM_016094 | 含COMM结构域2 |
C0MMD4 | NM_017828 | 含COMM结构域4 |
COMMD5 | NM_014066 | 高血压相关钙-调节基因 |
COPA | NM_004371 | 外被体蛋白质复合体,亚基α |
COPS6 | NM_006833 | COP9信号体亚基6 |
COQ2 | NM_015697 | 对羟基苯甲酸聚戊烯转移酶, |
COQ7 | NM_016138 | COQ7蛋白质 |
CORIN | NM_006587 | 心钠素 |
CORO1C | NM_014325 | 冠蛋白,肌动蛋白结合蛋白质,1C |
CORO2B | NM_006091 | 冠蛋白,肌动蛋白结合蛋白质,2B |
COX6B2 | NM_144613 | 细胞色素c氧化酶亚基VIb, |
COX7A2L | NM_004718 | 细胞色素c氧化酶亚基VIIa多肽2 |
COX8C | NM_182971 | 细胞色素c氧化酶亚基8C |
CP110 | NM_014711 | CP110蛋白质 |
CPEB3 | NM_014912 | 细胞质多腺苷化元件结合 |
CPM | NM_001005502 | 羧基肽酶M前体 |
CPNE1 | NM_003915 | copine I |
CPOX | NM_000097 | 粪卟啉原氧化酶 |
CPS1 | NM_001875 | 氨基甲酰-磷酸合成酶1,线粒体 |
CPSF6 | NM_007007 | 剪切和多聚腺苷酸化特异性因子6, |
CR1 | NM_000573 | 补体受体1同种型F前体 |
CRAMP1L | NM_020825 | Crm,cramped样 |
CREB1 | NM_004379 | cAMP应答元件结合蛋白1 |
CREB5 | NM_001011666 | cAMP应答元件结合蛋白5 |
CREBL2 | NM_001310 | cAMP应答元件结合蛋白质样2 |
CREM | NM_181571 | cAMP应答元件调节剂同种型a |
CRIM1 | NM_016441 | 半胱氨酸丰富运动神经元1 |
CRIPT | NM_014171 | 突触后蛋白质CRIPT |
CRK | NM_005206 | v-crk肉瘤病毒CT10癌基因同系物 |
CRMP1 | NM_001014809 | 瓦解蛋白反应调节蛋白质1同种型1 |
CROT | NM_021151 | 肉碱O-辛酰转移酶 |
CRP | NM_000567 | C-反应蛋白质,五聚环蛋白相关 |
CRSP3 | NM_004830 | Sp1转录所需辅因子 |
CRSP6 | NM_004268 | Sp1转录所需辅因子 |
CRSP7 | NM_004831 | Sp1转录所需辅因子 |
CRSP9 | NM_004270 | Sp1转录所需辅因子 |
CRTAM | NM_019604 | I类MHC-限制T细胞相关的 |
CRY2 | NM_021117 | 隐色素2(光裂合酶样) |
CS | NM_004077 | 柠檬酸合酶前体,同种型a |
CSAD | NM_015989 | 半胱氨酸亚磺酸脱羧酶相关 |
CSDE1 | NM_001007553 | NRAS上游同种型1 |
CSF2RA | NM_006140 | 集落刺激因子2受体α链 |
CSMD2 | NM_052896 | CUB和Sushi多结构域2 |
CSNK1G1 | NM_001011664 | 酪蛋白激酶1,γ1同种型L |
CSNK2A1 | NM_001895 | 酪蛋白激酶IIα1亚基同种型a |
CSTF2T | NM_015235 | 剪切刺激因子,3′pre-RNA,亚基 |
CTAGE1 | NM_022663 | 皮肤的T细胞淋巴瘤相关抗原1 |
CTDSPL | NM_001008392 | 小的CTD磷酸酶3同种型1 |
CTDSPL2 | NM_016396 | CTD(羧基末端结构域,RNA聚合酶II, |
CTF1 | NM_001330 | 心肌营养蛋白1 |
CTNND1 | NM_001331 | 联蛋白(钙黏着蛋白相关蛋白),δ1 |
CTNS | NM_001031681 | 胱氨酸病,肾同种型1 |
CTSB | NM_001908 | 组织蛋白酶B前蛋白原 |
CTSC | NM_148170 | 组织蛋白酶C同种型b前体 |
CTSK | NM_000396 | 组织蛋白酶K前蛋白原 |
CTSS | NM_004079 | 组织蛋白酶S前蛋白原 |
CTTNBP2NL | NM_018704 | 假定蛋白LOC55917 |
CUBN | NM_001081 | Cubilin |
CUGBP2 | NM_001025076 | CUG三联体重复,RNA结合蛋白2 |
CUL1 | NM_003592 | 滞蛋白1 |
CUL3 | NM_003590 | 滞蛋白3 |
CUTL2 | NM_015267 | cut样2 |
CX3CL1 | NM_002996 | 趋化因子(C-X3-C模体)配体1 |
CX40.1 | NM_153368 | 间隙连接连接蛋白40.1 |
CXCL14 | NM_004887 | 小可诱导细胞因子B14前体 |
CXCL5 | NM_002994 | 趋化因子(C-X-C模体)配体5前体 |
CXCL6 | NM_002993 | 趋化因子(C-X-C模体)配体6(粒细胞 |
CXCL9 | NM_002416 | 小可诱导细胞因子B9前体 |
CXorf20 | NM_153346 | 假定蛋白LOC139105 |
CXorf21 | NM_025159 | 假定蛋白LOC80231 |
CXorf38 | NM_144970 | 假定蛋白LOC159013 |
CXorf41 | NM_173494 | 假定蛋白LOC139212 |
CXorf53 | NM_001018055 | 含BRCA1/BRCA2复合体亚基36 |
CXorf6 | NM_005491 | 假定蛋白LOC10046 |
CXXC6 | NM_030625 | CXXC指6 |
CYB561D1 | NM_182580 | 含细胞色素b-561结构域1 |
CYB5B | NM_030579 | 细胞色素b5线粒体外膜 |
CYB5D1 | NM_144607 | 假定蛋白LOC124637 |
CYBB | NM_000397 | 细胞色素b-245,β多肽(慢性 |
CYBRD1 | NM_024843 | 细胞色素b还原酶1 |
CYCS | NM_018947 | 细胞色素c |
CYLD | NM_015247 | 遍在蛋白羧基1末端水解酶CYLD |
CYLN2 | NM_003388 | 细胞质接头2同种型1 |
CYP19A1 | NM_000103 | 细胞色素P450,家族19 |
CYP26B1 | NM_019885 | 细胞色素P450,家族26,亚家族b, |
CYP2U1 | NM_183075 | 细胞色素P450,家族2,亚家族U, |
CYP2W1 | NM_017781 | 细胞色素P450,家族2,亚家族W, |
CYP4F3 | NM_000896 | 细胞色素P450,家族4,亚家族F, |
CYSLTR2 | NM_020377 | 半胱氨酰白三烯受体2 |
D21S2056E | NM_003683 | 核仁蛋白质NOP52 |
DAPK2 | NM_014326 | 死亡相关蛋白激酶2 |
DAZAP2 | NM_014764 | DAZ相关蛋白2 |
DBF4 | NM_006716 | S期激酶激活物 |
DBF4B | NM_025104 | DBF4同系物B同种型2 |
DBT | NM_001918 | 二氢硫辛酰胺支链酰基转移酶 |
DCBLD2 | NM_080927 | 网柄菌素,含CUB和LCCL结构域2 |
DCLRE1C | NM_001033855 | artemis蛋白质同种型a |
DCTN4 | NM_016221 | 动力蛋白激活蛋白4(p62) |
DCTN5 | NM_032486 | 动力蛋白激活蛋白4 |
DCUN1D3 | NM_173475 | 假定蛋白LOC123879 |
DCUN1D4 | NM_015115 | DCN1,滞蛋白neddylation缺陷1,结构域 |
DDAH1 | NM_012137 | 二甲基精氨酸二甲氨基水解酶1 |
DDB2 | NM_000107 | 损伤特异性DNA结合蛋白2(48kD) |
DDHD1 | NM_030637 | DD含HD结构域1 |
DDHD2 | NM_015214 | DD含HD结构域2 |
DDOST | NM_005216 | 多萜醇二磷酸寡糖蛋白质 |
DDX11 | NM_030655 | DEAD/H(Asp-Glu-Ala-Asp/His)盒多肽11 |
DDX21 | NM_004728 | DEAD(Asp-Glu-Ala-Asp)盒多肽21 |
DDX26B | NM_182540 | 假定蛋白LOC203522 |
DDX46 | NM_014829 | DEAD(Asp-Glu-Ala-Asp)盒多肽46 |
DDX5 | NM_004396 | DEAD(Asp-Glu-Ala-Asp)盒多肽5 |
DDX51 | NM_175066 | DEAD(Asp-Glu-Ala-Asp)盒多肽51 |
DDX55 | NM_020936 | DEAD(Asp-Glu-Ala-Asp)盒多肽55 |
DDX59 | NM_031306 | DEAD(Asp-Glu-Ala-Asp)盒多肽59 |
DEADC1 | NM_182503 | 含脱氨酶结构域1 |
DEAF1 | NM_021008 | 抑制素 |
DECR2 | NM_020664 | 2,4-二烯酰辅酶A还原酶2,过氧化物酶体 |
DEDD | NM_032998 | 含死亡效应物结构域蛋白质 |
DEFB106A | NM_152251 | 防卫素,β106A |
DEGS1 | NM_003676 | 退化精母细胞同系物1,脂质 |
DENND1A | NM_024820 | 假定蛋白LOC57706同种型2 |
DENND2C | NM_198459 | 含DENN/MADD结构域2C |
DENND3 | NM_014957 | 假定蛋白LOC22898 |
DENND4C | NM_017925 | 假定蛋白LOC55667 |
DEPDC4 | NM_152317 | 含DEP结构域4 |
DERL2 | NM_016041 | Der1样结构域家族,成员2 |
DFFA | NM_004401 | DNA断裂因子,45kDa,α |
DFNA5 | NM_004403 | 耳聋,常染色体显性5蛋白质 |
DGAT2L4 | NM_001002254 | 二酰基甘油O-酰基转移酶2样4 |
DGCR13 | NM_001024733 | DiGeorge综合征基因H |
DGKQ | NM_001347 | 二酰基甘油激酶,θ |
DHDDS | NM_024887 | 脱氢长醇二磷酸合酶同种型a |
DHFRL1 | NM_176815 | 假定蛋白LOC200895 |
DHODH | NM_001025193 | 二氢乳清酸脱氢酶同种型2 |
DHTKD1 | NM_018706 | 脱氢酶E1和转酮醇酶结构域 |
DHX34 | NM_014681 | DEAH(Asp-Glu-Ala-His)盒多肽34 |
DICER1 | NM_030621 | 切酶1 |
DIDO1 | NM_033081 | 诱导死亡泯灭因子1同种型c |
DIO1 | NM_000792 | 去碘酶,碘化甲状腺原氨酸,类型I同种型a |
DIP2A | NM_015151 | DIP2样蛋白质同种型a |
DIP2B | NM_173602 | 假定蛋白LOC57609 |
DIRC1 | NM_052952 | 假定蛋白LOC116093 |
DISC1 | NM_001012957 | 精神分裂症中断裂1同种型Lv |
DIXDC1 | NM_033425 | 含DIX结构域1同种型b |
DKFZP434B0335 | NM_015395 | 假定蛋白LOC25851 |
DKFZp434I1020 | NM_194295 | 假定蛋白LOC196968 |
DKFZp451A211 | NM_001003399 | 假定蛋白LOC400169 |
DKFZP564J0863 | NM_015459 | 假定蛋白LOC25923 |
DKFZp564K142 | NM_032121 | 移植相关蛋白 |
DKFZp667M2411 | NM_207323 | 假定蛋白LOC147172 |
DKFZP686A10121 | NM_033107 | 紧密连接蛋白12 |
DKFZp686L1814 | NM_194282 | 假定蛋白LOC132660 |
DKFZp686O24166 | NM_001009913 | 假定蛋白LOC374383 |
DKFZp761E198 | NM_138368 | 假定蛋白LOC91056 |
DKFZp762I137 | NM_152411 | 假定蛋白LOC136051 |
DKFZP781I1119 | NM_152622 | 假定蛋白LOC166968 |
DLC1 | NM_006094 | 肝癌中缺失1同种型2 |
DLEC1 | NM_005106 | 肺癌和食管癌中缺失1同种型 |
DLGAP2 | NM_004745 | 大成虫盘(discs large)相关蛋白2 |
DLX5 | NM_005221 | 末端缺失同源框5 |
DMBX1 | NM_147192 | 间脑/中脑同源框1同种型b |
DMC1 | NM_007068 | mck1同系物的DMC1剂量抑制蛋白 |
DMN | NM_015286 | desmuslin同种型B |
DMP1 | NM_004407 | 牙本质基质酸性磷蛋白 |
DMRT2 | NM_006557 | 两性和mab-3相关转录因子 |
DMTF1 | NM_021145 | 细胞周期蛋白D结合myb样转录因子 |
DNAJA4 | NM_018602 | DnaJ(Hsp40)同系物,亚家族A,成员4 |
DNAJA5 | NM_001012339 | DnaJ同源物亚家族A成员5同种型2 |
DNAJB6 | NM_005494 | DnaJ(Hsp40)同系物,亚家族B,成员6 |
DNAJB9 | NM_012328 | DnaJ(Hsp40)同系物,亚家族B,成员9 |
DNAJC15 | NM_013238 | 含DNAJ结构域 |
DNAJC18 | NM_152686 | DnaJ(Hsp40)同系物,亚家族C,成员18 |
DNAJC19 | NM_145261 | 线粒体内膜易位酶 |
DNAJC5 | NM_025219 | DnaJ(Hsp40)同系物,亚家族C,成员5 |
DNASE2 | NM_001375 | 脱氧核糖核酸酶II,溶酶体前体 |
DNM2 | NM_001005360 | 发动蛋白2同种型1 |
DNM3 | NM_015569 | 发动蛋白3 |
DOCK9 | NM_015296 | 胞质分裂提呈9 |
DOPEY2 | NM_005128 | pad-1样 |
DPP10 | NM_001004360 | 二肽基肽酶10短同种型 |
DPP3 | NM_005700 | 二肽基肽酶III |
DPP9 | NM_139159 | 二肽基肽酶9 |
DPY19L3 | NM_207325 | dpy-19样3 |
DPYD | NM_000110 | 二氢嘧啶脱氢酶 |
DPYSL5 | NM_020134 | 二氢嘧啶酶样5 |
DRD1 | NM_000794 | 多巴胺受体D1 |
DSC3 | NM_024423 | 桥粒胶蛋白3同种型Dsc3b前蛋白原 |
DSG4 | NM_177986 | 桥粒芯糖蛋白4 |
DSPG3 | NM_004950 | 硫酸皮肤素蛋白聚糖3前体 |
DTWD2 | NM_173666 | 含DTW结构域2 |
DUSP10 | NM_007207 | 双特异性磷酸酶10同种型a |
DUSP13 | NM_001007271 | 肌肉限制性双特异性磷酸酶 |
DUSP18 | NM_152511 | 双特异性磷酸酶18 |
DUSP2 | NM_004418 | 双特异性磷酸酶2 |
DUSP6 | NM_001946 | 双特异性磷酸酶6同种型a |
DUSP8 | NM_004420 | 双特异性磷酸酶8 |
DUXA | NM_001012729 | 假定蛋白LOC503835 |
DVL3 | NM_004423 | dishevelled 3 |
DXS9879E | NM_006014 | ESO3蛋白质 |
DYNC1LI2 | NM_006141 | 动力蛋白,细胞质,轻链中间体 |
DYNLT1 | NM_006519 | t-复合体相关-睾丸表达1样1 |
DYRK1A | NM_001396 | 双特异性酪氨酸-(Y)-磷酸化 |
DYRK2 | NM_003583 | 双特异性酪氨酸-(Y)-磷酸化 |
DZIP1 | NM_014934 | DAZ相互作用蛋白质1同种型1 |
E2F1 | NM_005225 | E2F转录因子1 |
E2F2 | NM_004091 | E2F转录因子2 |
E2F3 | NM_001949 | E2F转录因子3 |
E2F5 | NM_001951 | E2F转录因子5 |
EAF1 | NM_033083 | ELL相关因子1 |
EBF3 | NM_001005463 | 早期B细胞因子3 |
EBI2 | NM_004951 | EBV-诱导的G蛋白偶联受体2 |
EDA | NM_001005610 | 外胚层发育异常蛋白A同种型EDA-B |
EDA2R | NM_021783 | X-连锁外胚层发育异常蛋白受体 |
EDD1 | NM_015902 | E3遍在蛋白蛋白质连接酶,HECT结构域 |
EDEM1 | NM_014674 | ER退化增强子,甘露糖苷酶α样 |
EDG1 | NM_001400 | 内皮分化,鞘脂 |
EDG3 | NM_005226 | 内皮分化,鞘脂 |
EFHA2 | NM_181723 | EF手型结构域家族,成员A2 |
EFNA1 | NM_004428 | 肝配蛋白(ephrin)A1同种型a前体 |
EFNB1 | NM_004429 | 肝配蛋白-B1前体 |
EFNB2 | NM_004093 | 肝配蛋白B2 |
EFTUD1 | NM_024580 | 延伸因子Tu GTP结合结构域 |
EGFL4 | NM_001410 | EGF样-结构域,多样的4 |
EGLN1 | NM_022051 | egl 9同系物1 |
EGLN3 | NM_022073 | egl 9同系物3 |
EGR2 | NM_000399 | 早期生长反应因子2蛋白质 |
EGR3 | NM_004430 | 早期生长反应因子3 |
EHD3 | NM_014600 | 含EH-结构域3 |
EHHADH | NM_001966 | 烯酰辅酶A,水合酶/3-羟酰 |
EHMT1 | NM_024757 | 常染色质组蛋白甲基转移酶1 |
EI24 | NM_001007277 | 依托泊苷诱导的24同种型2 |
EID-3 | NM_152361 | EID-2样分化抑制剂-3 |
EIF2AK4 | NM_001013703 | 真核翻译起始因子2α |
EIF2C1 | NM_012199 | 真核翻译起始因子2C,1 |
EIF2S1 | NM_004094 | 真核翻译起始因子2, |
EIF3S2 | NM_003757 | 真核翻译起始因子3, |
EIF4EBP2 | NM_004096 | 真核翻译起始因子4E |
EIF4G2 | NM_001418 | 真核翻译起始因子4 |
EIF5 | NM_001969 | 真核翻译起始因子5 |
EIF5A2 | NM_020390 | eIF-5A2蛋白质 |
ELK3 | NM_005230 | ELK3蛋白质 |
Ells1 | NM_152793 | 假定蛋白LOC222166 |
ELMO1 | NM_014800 | 吞入和细胞运动1同种型1 |
ELMOD1 | NM_018712 | 含ELMO结构域1 |
EMR2 | NM_013447 | 含egf样组件,黏蛋白样,激素 |
EMX2 | NM_004098 | 空气孔同系物2 |
EN2 | NM_001427 | engrailed同系物2 |
ENAH | NM_001008493 | enabled同系物同种型a |
ENAM | NM_031889 | Enamelin |
ENO2 | NM_001975 | 烯醇化酶2 |
ENPP4 | NM_014936 | 胞外核苷酸焦磷酸酶/磷酸二酯酶 |
ENPP5 | NM_021572 | 胞外核苷酸焦磷酸酶/磷酸二酯酶 |
ENSA | NM_207168 | 内磺肽α同种型8 |
ENTPD4 | NM_004901 | 外核苷三磷酸二磷酸水解酶 |
ENTPD6 | NM_001247 | 外核苷三磷酸二磷酸水解酶 |
EPAS1 | NM_001430 | 内皮PAS结构域蛋白质1 |
EPB41 | NM_004437 | 红细胞膜蛋白带4.1 |
EPB41L1 | NM_012156 | 红细胞膜蛋白带4.1样1 |
EPB41L2 | NM_001431 | 红细胞膜蛋白带4.1样2 |
EPB41L4B | NM_019114 | 红细胞膜蛋白带4.1样4B |
EPB41L5 | NM_020909 | 红细胞膜蛋白带4.1样5 |
EPDR1 | NM_017549 | 结直肠癌中上调基因1蛋白质 |
EPHA4 | NM_004438 | 肝配蛋白受体EphA4 |
EPHA5 | NM_004439 | 肝配蛋白受体EphA5同种型a |
EPHA7 | NM_004440 | 肝配蛋白受体EphA7 |
EPHB1 | NM_004441 | 肝配蛋白受体EphB1前体 |
EPHB4 | NM_004444 | 肝配蛋白受体EphB4前体 |
EPM2A | NM_005670 | 痫蛋白同种型a |
EPM2AIP1 | NM_014805 | EPM2A相互作用蛋白质1 |
ERBB2IP | NM_001006600 | ERBB2相互作用蛋白质同种型7 |
ERBB3 | NM_001982 | erbB-3同种型1前体 |
EREG | NM_001432 | 表皮调节素前体 |
ERG | NM_004449 | v-ets成红细胞增多症病毒E26癌基因样 |
ERGIC1 | NM_020462 | 内质网-高尔基体中间体 |
ERN1 | NM_152461 | 内质网至核信号转导1 |
ERO1LB | NM_019891 | 内质网氧化还原酶1-Lβ |
ESR1 | NM_000125 | 雌激素受体1 |
ET | NM_024311 | 假定蛋白LOC79157 |
ETF1 | NM_004730 | 真核翻译终止因子1 |
ETV1 | NM_004956 | ets变体基因1 |
ETV5 | NM_004454 | ets变体基因5(ets相关分子) |
EVA1 | NM_005797 | 上皮V样抗原1前体 |
EXOSC1 | NM_016046 | 外体核心蛋白质CSL4 |
EYA1 | NM_000503 | 缺眼1同种型b |
EYA4 | NM_004100 | 缺眼4同种型a |
EZH1 | NM_001991 | zeste增强子同系物1 |
F11R | NM_016946 | F11受体同种型a前体 |
F2R | NM_001992 | 凝血因子II受体前体 |
F2RL1 | NM_005242 | 凝血因子II(凝血酶)受体样1 |
F2RL2 | NM_004101 | 凝血因子II(凝血酶)受体样2 |
F2RL3 | NM_003950 | 凝血因子II(凝血酶)受体样3 |
F3 | NM_001993 | 凝血因子III前体 |
F9 | NM_000133 | 凝血因子IX |
FADS1 | NM_013402 | 脂肪酸去饱和酶1 |
FADS6 | NM_178128 | 脂肪酸去饱和酶结构域家族,成员6 |
FAHD1 | NM_031208 | 含延胡索酰乙酰乙酸水解酶结构域 |
FAIM2 | NM_012306 | Fas细胞凋亡抑制分子2 |
FAM102A | NM_203305 | 早期雌激素-诱导的基因1蛋白质同种型b |
FAM106A | NM_024974 | 假定蛋白LOC80039 |
FAM107A | NM_007177 | 肾细胞癌中下调 |
FAM107B | NM_031453 | 假定蛋白LOC83641 |
FAM13A1 | NM_001015045 | 具有序列相似性的家族13,成员A1 |
FAM13C1 | NM_001001971 | 假定蛋白LOC220965同种型2 |
FAM18B | NM_016078 | 假定蛋白LOC51030 |
FAM19A1 | NM_213609 | 具有序列相似性的家族19(趋化因子 |
FAM36A | NM_198076 | 具有序列相似性的家族36,成员A |
FAM3A | NM_021806 | 家族3,成员A蛋白质 |
FAM3C | NM_014888 | 预测的成骨细胞蛋白质 |
FAM40A | NM_033088 | 假定蛋白LOC85369 |
FAM40B | NM_020704 | 假定蛋白LOC57464 |
FAM43A | NM_153690 | 假定蛋白LOC131583 |
FAM45A | NM_207009 | 假定蛋白LOC404636 |
FAM45B | NM_018472 | 假定蛋白LOC55855 |
FAM46C | NM_017709 | 假定蛋白LOC54855 |
FAM46D | NM_152630 | 假定蛋白LOC169966 |
FAM53B | NM_014661 | 假定蛋白LOC9679 |
FAM53C | NM_016605 | 家族53,成员C蛋白质 |
FAM54B | NM_019557 | 假定蛋白LOC56181 |
FAM55C | NM_145037 | 假定蛋白LOC91775 |
FAM57A | NM_024792 | 具有序列相似性的家族57,成员A |
FAM60A | NM_021238 | 具有序列相似性的家族60,成员A |
FAM62B | NM_020728 | 具有序列相似性的家族62(C2结构域 |
FAM65A | NM_024519 | 假定蛋白LOC79567 |
FAM70A | NM_017938 | 假定蛋白LOC55026 |
FAM73A | NM_198549 | 假定蛋白LOC374986 |
FAM73B | NM_032809 | 假定蛋白LOC84895 |
FAM79A | NM_182752 | 假定蛋白LOC127262 |
FAM79B | NM_198485 | 假定蛋白LOC285386 |
FAM82C | NM_018145 | 具有序列相似性的家族82,成员C |
FAM83D | NM_030919 | 假定蛋白LOC81610 |
FAM83E | NM_017708 | 假定蛋白LOC54854 |
FAM83H | NM_198488 | 假定蛋白LOC286077 |
FAM84B | NM_174911 | 乳癌膜蛋白质101 |
FAM86C | NM_018172 | 假定蛋白LOC55199同种型1 |
FAM8A1 | NM_016255 | 常染色体高保守蛋白质 |
FAM98B | NM_173611 | 假定蛋白LOC283742 |
FANCC | NM_000136 | 范科尼贫血,互补群C |
FANCD2 | NM_033084 | 范科尼贫血互补群D2同种型 |
FARSLB | NM_005687 | 苯丙氨酸-tRNA合成酶样,β |
FASLG | NM_000639 | fas配体 |
FASTK | NM_006712 | Fas-激活的丝氨酸/苏氨酸激酶同种型1 |
FAT2 | NM_001447 | FAT肿瘤抑制物2前体 |
FBLIM1 | NM_001024216 | 细丝蛋白结合LIM蛋白质-1同种型c |
FBLN1 | NM_006486 | 纤蛋白1同种型D |
FBN2 | NM_001999 | 原纤蛋白2前体 |
FBXL11 | NM_012308 | F-盒和亮氨酸丰富重复蛋白质11 |
FBXL18 | NM_024963 | F-盒和亮氨酸丰富重复蛋白质18 |
FBXL22 | NM_203373 | 假定蛋白LOC283807 |
FBXL3 | NM_012158 | F-盒和亮氨酸丰富重复蛋白质3 |
FBXL5 | NM_012161 | F-盒和亮氨酸丰富重复蛋白质5同种型 |
FBXL7 | NM_012304 | F-盒和亮氨酸丰富重复蛋白质7 |
FBXO11 | NM_025133 | 只有F-盒蛋白质11同种型1 |
FBXO18 | NM_032807 | 只有F-盒蛋白质,解旋酶,18同种型1 |
FBXO21 | NM_015002 | 只有F-盒蛋白质21同种型2 |
FBXO27 | NM_178820 | F-盒蛋白质27 |
FBXO31 | NM_024735 | F-盒蛋白质31 |
FBXO39 | NM_153230 | F-盒蛋白质39 |
FBXO40 | NM_016298 | F-盒蛋白质40 |
FBXO6 | NM_018438 | F-盒only蛋白质6 |
FBXO9 | NM_012347 | F-盒only蛋白质9同种型1 |
FBXW11 | NM_012300 | F-盒和WD-40结构域蛋白质1B同种型C |
FCHO2 | NM_138782 | FCH结构域only 2 |
FCMD | NM_006731 | Fukutin |
FEM1C | NM_020177 | 雌性化1同系物a |
FEZ2 | NM_005102 | zygin 2 |
FGD1 | NM_004463 | 颜面生殖器发育不良蛋白质 |
FGD4 | NM_139241 | FYVE,含RhoGEF和PH结构域4 |
FGD5 | NM_152536 | FYVE,含RhoGEF和PH结构域5 |
FGF2 | NM_002006 | 成纤维细胞生长因子2 |
FGF4 | NM_002007 | 成纤维细胞生长因子4前体 |
FGF5 | NM_004464 | 成纤维细胞生长因子5同种型1前体 |
FGF7 | NM_002009 | 成纤维细胞生长因子7前体 |
FGFR1 | NM_023107 | 成纤维细胞生长因子受体1同种型5 |
FGFR2 | NM_022973 | 成纤维细胞生长因子受体2同种型6 |
FGL2 | NM_006682 | 血纤蛋白原样2 |
FIGNL1 | NM_022116 | fidgetin样1 |
FJX1 | NM_014344 | 四连接盒1 |
FKBP14 | NM_017946 | FK506结合蛋白14,22kDa |
FKBP1B | NM_004116 | FK506-结合蛋白1B同种型a |
FKBP5 | NM_004117 | FK506结合蛋白5 |
FKRP | NM_024301 | fukutin相关蛋白质 |
FLG2 | NM_001014342 | 聚丝蛋白2 |
FLJ10159 | NM_018013 | 假定蛋白LOC55084 |
FLJ10241 | NM_018035 | 假定蛋白LOC55101 |
FLJ10357 | NM_018071 | 假定蛋白LOC55701 |
FLJ10781 | NM_018215 | 假定蛋白LOC55228 |
FLJ10803 | NM_018224 | 假定蛋白LOC55744 |
FLJ10925 | NM_018275 | 假定蛋白LOC55262 |
FLJ11021 | NM_023012 | 假定蛋白LOC65117同种型a |
FLJ11151 | NM_018340 | 假定蛋白LOC55313 |
FLJ11171 | NM_018348 | 假定蛋白LOC55783 |
FLJ11259 | NM_018370 | 假定蛋白LOC55332 |
FLJ11292 | NM_018382 | 假定蛋白LOC55338 |
FLJ11806 | NM_024824 | 核蛋白质UKp68同种型1 |
FLJ12331 | NM_024986 | 假定蛋白LOC80052 |
FLJ12505 | NM_024749 | 假定蛋白LOC79805 |
FLJ12949 | NM_023008 | 假定蛋白LOC65095同种型1 |
FLJ13236 | NM_024902 | 假定蛋白FLJ13236 |
FLJ13576 | NM_022484 | 假定蛋白LOC64418 |
FLJ13639 | NM_024705 | 假定蛋白FLJ13639同种型2 |
FLJ13646 | NM_024584 | 假定蛋白LOC79635 |
FLJ13841 | NM_024702 | 假定蛋白LOC79755 |
FLJ13946 | NM_152275 | 假定蛋白LOC92104 |
FLJ13984 | NM_024770 | 假定蛋白LOC79828 |
FLJ14107 | NM_025026 | 假定蛋白LOC80094 |
FLJ14213 | NM_024841 | 假定蛋白LOC79899 |
FLJ14397 | NM_032779 | 假定蛋白LOC84865 |
FLJ14437 | NM_032578 | 肌钯蛋白 |
FLJ14466 | NM_032790 | 假定蛋白LOC84876 |
FLJ14503 | NM_152780 | 假定蛋白LOC256714 |
FLJ16008 | NM_001001665 | 假定蛋白LOC339761 |
FLJ16237 | NM_001004320 | 假定蛋白LOC392636 |
FLJ16542 | NM_001004301 | 假定蛋白LOC126017 |
FLJ20032 | NM_017628 | 假定蛋白LOC54790 |
FLJ20186 | NM_207514 | FDCP中差异表达8同种型1 |
FLJ20294 | NM_017749 | 假定蛋白LOC55626 |
FLJ20298 | NM_017752 | 假定蛋白LOC54885同种型a |
FLJ20366 | NM_017786 | 假定蛋白FLJ20366 |
FLJ20487 | NM_017841 | 假定蛋白LOC54949 |
FLJ20489 | NM_017842 | 假定蛋白LOC55652 |
FLJ20758 | NM_017952 | 假定蛋白LOC55037 |
FLJ20972 | NM_025030 | 假定蛋白LOC80098 |
FLJ21125 | NM_024627 | 假定蛋白LOC79680 |
FLJ21657 | NM_022483 | 假定蛋白LOC64417 |
FLJ21687 | NM_024859 | 含PDZ结构域,X染色体 |
FLJ21736 | NM_024922 | 酯酶31 |
FLJ21945 | NM_025203 | 假定蛋白LOC80304 |
FLJ21963 | NM_024560 | 假定蛋白LOC79611 |
FLJ23235 | NM_024943 | 假定蛋白LOC80008 |
FLJ23322 | NM_024955 | 假定蛋白LOC80020 |
FLJ23447 | NM_024825 | 假定蛋白LOC79883 |
FLJ23834 | NM_152750 | 假定蛋白LOC222256 |
FLJ23861 | NM_152519 | 假定蛋白LOC151050 |
FLJ25102 | NM_182626 | 假定蛋白LOC348738 |
FLJ25328 | NM_152483 | 假定蛋白LOC148231 |
FLJ25416 | NM_145018 | 假定蛋白LOC220042 |
FLJ25476 | NM_152493 | 假定蛋白LOC149076 |
FLJ25477 | NM_152704 | 假定蛋白LOC219287同种型1 |
FLJ25530 | NM_152722 | 肝细胞细胞黏着分子 |
FLJ25773 | NM_182560 | 假定蛋白LOC283598 |
FLJ27365 | NM_207477 | 假定蛋白LOC400931 |
FLJ30294 | NM_144632 | 假定蛋白LOC130827 |
FLJ31132 | NM_001004355 | 假定蛋白LOC441522 |
FLJ31568 | NM_152509 | 假定蛋白LOC150244 |
FLJ31659 | NM_153027 | 假定蛋白LOC152756 |
FLJ31818 | NM_152556 | 假定蛋白LOC154743 |
FLJ31951 | NM_144726 | 假定蛋白LOC153830 |
FLJ32028 | NM_152680 | 假定蛋白LOC201799 |
FLJ32214 | NM_152473 | 假定蛋白LOC147664 |
FLJ32549 | NM_152440 | 假定蛋白LOC144577 |
FLJ32675 | NM_173811 | 假定蛋白LOC283254 |
FLJ33860 | NM_173644 | 假定蛋白LOC284756 |
FLJ34969 | NM_152678 | 假定蛋白LOC201627 |
FLJ35119 | NM_175871 | 假定蛋白LOC126074 |
FLJ35429 | NM_001003807 | 假定蛋白LOC285830 |
FLJ35530 | NM_207467 | 假定蛋白LOC400798 |
FLJ35695 | NM_207444 | 假定蛋白LOC400359 |
FLJ35848 | NM_001033659 | 假定蛋白LOC284071 |
FLJ35934 | NM_207453 | 假定蛋白LOC400579 |
FLJ36031 | NM_175884 | 假定蛋白LOC168455 |
FLJ36090 | NM_153223 | 假定蛋白LOC153241 |
FLJ36268 | NM_207511 | 假定蛋白LOC401563 |
FLJ37543 | NM_173667 | 假定蛋白LOC285668 |
FLJ37562 | NM_152409 | 假定蛋白LOC134553 |
FLJ38101 | NM_153261 | 假定蛋白LOC255919 |
FLJ38288 | NM_173632 | 假定蛋白LOC284309 |
FLJ38663 | NM_152269 | 假定蛋白LOC91574 |
FLJ38717 | NM_001004322 | 假定蛋白LOC401261 |
FLJ38973 | NM_153689 | 假定蛋白LOC205327 |
FLJ38991 | NM_173827 | 线粒体COX18同种型6 |
FLJ39237 | NM_198571 | 假定蛋白LOC375607 |
FLJ39502 | NM_173648 | 假定蛋白LOC285025 |
FLJ39653 | NM_152684 | 假定蛋白LOC202020 |
FLJ40172 | NM_173649 | 假定蛋白LOC285051 |
FLJ40194 | NM_001007529 | 假定蛋白LOC124871 |
FLJ40453 | NM_001007542 | 假定蛋白LOC401217 |
FLJ40919 | NM_182508 | 假定蛋白LOC144809 |
FLJ41170 | NM_001004332 | 假定蛋白LOC440200 |
FLJ41821 | NM_001001697 | 假定蛋白LOC401011 |
FLJ42102 | NM_001001680 | 假定蛋白LOC399923 |
FLJ42133 | NM_001001690 | 假定蛋白LOC400844 |
FLJ42289 | NM_207383 | 假定蛋白LOC388182 |
FLJ42842 | NM_001004335 | 假定蛋白LOC440446 |
FLJ42957 | NM_207436 | 假定蛋白LOC400077 |
FLJ43582 | NM_207412 | 假定蛋白LOC389649 |
FLJ44006 | NM_001001696 | 假定蛋白LOC400997 |
FLJ44060 | NM_207366 | 假定蛋白LOC346288 |
FLJ44290 | NM_198564 | 假定蛋白LOC375347 |
FLJ44385 | NM_207478 | 假定蛋白LOC400934 |
FLJ44790 | NM_001001691 | 假定蛋白LOC400850 |
FLJ44815 | NM_207454 | 假定蛋白LOC400591 |
FLJ45187 | NM_207371 | 假定蛋白LOC387640 |
FLJ45202 | NM_207507 | 假定蛋白LOC401508 |
FLJ45224 | NM_207510 | 假定蛋白LOC401562 |
FLJ45248 | NM_207505 | 假定蛋白LOC401472 |
FLJ45256 | NM_207448 | 假定蛋白LOC400511 |
FLJ45337 | NM_207465 | 假定蛋白LOC400754 |
FLJ45422 | NM_001004349 | 假定蛋白LOC441140 |
FLJ45645 | NM_198557 | 假定蛋白LOC375287 |
FLJ45909 | NM_198445 | 假定蛋白LOC126432 |
FLJ46247 | NM_198529 | 假定蛋白LOC374786同种型1 |
FLJ46363 | NM_207434 | 假定蛋白LOC400002 |
FLJ46385 | NM_001001675 | 假定蛋白LOC390963 |
FLJ90013 | NM_153365 | 假定蛋白LOC202018 |
FLJ90396 | NM_153358 | 假定蛋白LOC163049 |
FLJ90579 | NM_173591 | 假定蛋白LOC28331O |
FLJ90757 | NM_001004336 | 假定蛋白LOC440465 |
FLRT2 | NM_013231 | 纤连蛋白亮氨酸丰富跨膜蛋白质 |
FLT1 | NM_002019 | fms相关酪氨酸激酶1(血管的 |
FLYWCH1 | NM_032296 | FLYWCH-类型锌指1同种型a |
FMNL2 | NM_001004417 | 成蛋白样2同种型D |
FMNL3 | NM_175736 | 成蛋白样3同种型1 |
FMO3 | NM_001002294 | 含黄素单加氧酶3同种型2 |
FMOD | NM_002023 | 纤调蛋白前体 |
FNBP1 | NM_015033 | 成蛋白结合蛋白1 |
FNBP1L | NM_001024948 | 成蛋白结合蛋白1样同种型1 |
FNBP4 | NM_015308 | 成蛋白结合蛋白4 |
FNDC3A | NM_014923 | 含纤连蛋白类型III结构域3A |
FNDC3B | NM_022763 | 含纤连蛋白类型III结构域3B |
FNDC5 | NM_153756 | 含纤连蛋白类型III结构域5 |
FOSL1 | NM_005438 | FOS样抗原1 |
FOXA1 | NM_004496 | 叉头盒A1 |
FOXF1 | NM_001451 | 叉头盒F1 |
FOXJ2 | NM_018416 | 叉头盒J2 |
FOXJ3 | NM_014947 | 叉头盒J3 |
FOXL2 | NM_023067 | 叉头盒L2 |
FOXQ1 | NM_033260 | 叉头盒Q1 |
FPGT | NM_003838 | 岩藻糖1磷酸乌苷转移酶 |
FRAT2 | NM_012083 | GSK-3结合蛋白FRAT2 |
FREQ | NM_014286 | 频蛋白同系物 |
FRMD4A | NM_018027 | 含FERM结构域4A |
FRMD6 | NM_152330 | 含FERM结构域6 |
FTS | NM_001012398 | 融合的toes同系物 |
FUBP1 | NM_003902 | 远端上游元件结合蛋白质 |
FUCA2 | NM_032020 | 岩藻糖苷酶,α-L-2,原生质 |
FUNDC2 | NM_023934 | 含FUN14结构域2 |
FURIN | NM_002569 | 弗林蛋白酶前蛋白原 |
FUSIP1 | NM_054016 | FUS相互作用蛋白质(丝氨酸-精氨酸丰富)1 |
FUT2 | NM_000511 | 岩藻糖基转移酶2(含分泌状态) |
FUT3 | NM_000149 | 岩藻糖基转移酶3(半乳糖苷 |
FUT4 | NM_002033 | 岩藻糖基转移酶4 |
FUT5 | NM_002034 | 岩藻糖基转移酶5 |
FUT6 | NM_000150 | 岩藻糖基转移酶6(α(1,3) |
FXN | NM_000144 | 弗氏共济失调蛋白同种型1前蛋白原 |
FXR1 | NM_001013438 | 脆性X智力低下相关蛋白1 |
FXYD6 | NM_022003 | 含FXYD结构域离子转运调节物 |
FYCO1 | NM_024513 | 含FYVE和卷曲螺旋结构域1 |
FZD10 | NM_007197 | frizzled 10 |
FZD4 | NM_012193 | frizzled 4 |
FZD6 | NM_003506 | frizzled 6 |
FZD7 | NM_003507 | frizzled 7 |
GAB1 | NM_002039 | GRB2相关结合蛋白1同种型b |
GAB2 | NM_012296 | GRB2相关结合蛋白2同种型b |
GAB3 | NM_080612 | Gab3蛋白质 |
GABBR1 | NM_001470 | γ-氨基丁酸(GABA)B受体1 |
GABBR2 | NM_005458 | G蛋白偶联受体51 |
GABPB2 | NM_005254 | GA结合蛋白转录因子,β |
GABRE | NM_004961 | γ-氨基丁酸(GABA)A受体, |
GABRG1 | NM_173536 | γ-氨基丁酸A受体,γ1 |
GABRG2 | NM_198904 | γ-氨基丁酸A受体,γ2 |
GAK | NM_005255 | 细胞周期蛋白G相关的激酶 |
GALIG | NM_194327 | 半乳凝素-3内部基因 |
GALK2 | NM_001001556 | 半乳糖激酶2同种型2 |
GALM | NM_138801 | 半乳糖变旋酶(醛糖1-表异构酶) |
GALNT3 | NM_004482 | 多肽N-乙酰氨基半乳糖转移酶3 |
GALNT4 | NM_003774 | 多肽N-乙酰氨基半乳糖转移酶4 |
GALNT6 | NM_007210 | 多肽N-乙酰氨基半乳糖转移酶6 |
GALNTL2 | NM_054110 | UDP-N-乙酰基-α-D-半乳糖胺:多肽 |
GAN | NM_022041 | 巨轴突蛋白 |
GARS | NM_002047 | 甘氨酰-tRNA合成酶 |
GAS7 | NM_003644 | 生长停滞-特异性7同种型a |
GAS8 | NM_001481 | 生长停滞-特异性8 |
GATA6 | NM_005257 | GATA结合蛋白6 |
GATAD1 | NM_021167 | 含GATA锌指结构域1 |
GATS | NM_178831 | STAG的反链转录单位3 |
GBF1 | NM_004193 | 高尔基体-特异性布雷菲德菌素A抗性因子1 |
GBP1 | NM_002053 | 乌苷酸结合蛋白1, |
GBP3 | NM_018284 | 乌苷酸结合蛋白3 |
GBP4 | NM_052941 | 乌苷酸结合蛋白4 |
GCC2 | NM_014635 | 含GRIP和卷曲螺旋结构域2同种型 |
GCET2 | NM_001008756 | 生发中心表达的转录物2同种型 |
GCLM | NM_002061 | 谷氨酸-半胱氨酸连接酶调节蛋白质 |
GCNT2 | NM_001491 | 葡糖胺(N-乙酰)转移酶2, |
GCNT4 | NM_016591 | 核心2β-1,6-N-乙酰葡糖胺转移酶 |
Gcom1 | NM_001018100 | GRINL1A上游蛋白质同种型7 |
GDA | NM_004293 | 乌嘌呤脱氨酶 |
GDPD1 | NM_182569 | 甘油磷酸二酯磷酸二酯酶结构域 |
GEMIN7 | NM_001007269 | gemin 7 |
GENX-3414 | NM_003943 | genethonin 1 |
GFER | NM_005262 | erv1样生长因子 |
GGA1 | NM_001001561 | 高尔基体相关的,含γ衔接蛋白耳, |
GGT6 | NM_153338 | γ-谷氨酰基转移酶6同系物 |
GIMAP8 | NM_175571 | GTP酶,IMAP家族成员8 |
GIOT-1 | NM_153257 | 促性腺激素可诱导的转录阻抑物 |
GIPC2 | NM_017655 | PDZ结构域蛋白质GIPC2 |
GIT2 | NM_014776 | G蛋白偶联受体激酶-相互作用分子2 |
GJA1 | NM_000165 | 间隙连接连接蛋白43 |
GJB7 | NM_198568 | 假定蛋白LOC375519 |
GKAP1 | NM_025211 | G激酶锚定蛋白质1 |
GLB1L | NM_024506 | 半乳糖苷酶,β1样 |
GLDN | NM_181789 | Collomin |
GLO1 | NM_006708 | 乙二醛酶I |
GLT25D2 | NM_015101 | 含糖基转移酶25结构域2 |
GLTP | NM_016433 | 糖脂转运蛋白质 |
GM632 | NM_020713 | 假定蛋白LOC57473 |
GMCL1 | NM_178439 | 生殖细胞更少 |
GMCL1L | NM_022471 | 生殖细胞更少同系物1(果蝇)样 |
GMFB | NM_004124 | 胶质成熟因子,β |
GNAI1 | NM_002069 | 乌嘌呤核苷酸结合蛋白(G蛋白质), |
GNAZ | NM_002073 | 乌嘌呤核苷酸结合蛋白质,αz |
GNB5 | NM_006578 | 鸟嘌呤核苷酸结合蛋白质,β-5 |
GNE | NM_005476 | UDP-N-乙酰葡糖胺-2-表异构酶/N- |
GNPDA2 | NM_138335 | 葡糖胺-6-磷酸脱氨酶2 |
GNPNAT1 | NM_198066 | 葡糖胺-磷酸N-乙酰转移酶1 |
GNPTAB | NM_024312 | N-乙酰葡糖胺-1-磷酸转移酶 |
GNS | NM_002076 | 葡糖胺(N-乙酰)-6-硫酸酯酶前体 |
GOLGA1 | NM_002077 | 高尔基体蛋白97 |
GOLGA2 | NM_004486 | 高尔基体自身抗原,高尔基体蛋白亚家族a,2 |
GOLPH2 | NM_016548 | 高尔基体磷蛋白2 |
GOLPH3 | NM_022130 | 高尔基体磷蛋白3 |
GORASP1 | NM_031899 | 高尔基体再组装堆叠蛋白质1 |
GOSR1 | NM_001007024 | 高尔基体SNAP受体复合体成员1同种型3 |
GP5 | NM_004488 | 糖蛋白V(血小板) |
GPAM | NM_020918 | 线粒体甘油3-磷酸 |
GPATC2 | NM_018040 | 含G patch结构域2 |
GPD1 | NM_005276 | 甘油-3-磷酸脱氢酶1(可溶的) |
GPIAP1 | NM_005898 | 膜组分10号染色体表面标志物 |
GPR1 | NM_005279 | G蛋白偶联受体1 |
GPR114 | NM_153837 | G-蛋白偶联受体114 |
GPR126 | NM_001032394 | G蛋白偶联受体126α2 |
GPR132 | NM_013345 | G蛋白偶联受体132 |
GPR135 | NM_022571 | G蛋白偶联受体135 |
GPR137B | NM_003272 | 跨膜7超家族成员1 |
GPR155 | NM_001033045 | G蛋白偶联受体155 |
GPR176 | NM_007223 | 假定的G蛋白偶联受体 |
GPR180 | NM_180989 | G蛋白偶联受体180前体 |
GPR26 | NM_153442 | G蛋白偶联受体26 |
GPR3 | NM_005281 | G蛋白偶联受体3 |
GPR37 | NM_005302 | G蛋白偶联受体37 |
GPR45 | NM_007227 | G蛋白偶联受体45 |
GPR6 | NM_005284 | G蛋白偶联受体6 |
GPR81 | NM_032554 | G蛋白偶联受体81 |
GPR83 | NM_016540 | G蛋白偶联受体83 |
GPR85 | NM_018970 | G蛋白偶联受体85 |
GRAMD1A | NM_020895 | 假定蛋白LOC57655 |
GRB2 | NM_002086 | 生长因子受体结合蛋白质2同种型 |
GREB1 | NM_148903 | GREB1蛋白质同种型c |
GRHL2 | NM_024915 | 转录因子CP2样3 |
GRIN3A | NM_133445 | 谷氨酸受体,离子型, |
GRIPAP1 | NM_207672 | GRIP1相关蛋白1同种型2 |
GRM1 | NM_000838 | 谷氨酸受体,代谢型1 |
GRM6 | NM_000843 | 谷氨酸受体,代谢型6前体 |
GRM7 | NM_000844 | 谷氨酸受体,代谢型7同种型a |
GRPEL2 | NM_152407 | GrpE样2,线粒体 |
GRTP1 | NM_024719 | 生长激素调节的TBC蛋白质1 |
GSTM3 | NM_000849 | 谷胱甘肽S-转移酶M3 |
GTDC1 | NM_001006636 | 含糖基转移酶样结构域1 |
GTF2H2 | NM_001515 | 通用转录因子IIH,多肽2, |
GTPBP5 | NM_015666 | GTP结合蛋白5 |
GUCA1B | NM_002098 | 乌苷酸环化酶激活因子1B(视网膜) |
GUCY1A3 | NM_000856 | 鸟苷酸环化酶1,可溶的,α3 |
GUCY1B2 | NM_004129 | 乌苷酸环化酶1,可溶的,β2 |
GYS1 | NM_002103 | 糖原合酶1(肌肉) |
H2AFJ | NM_018267 | H2A组蛋白家族,成员J同种型1 |
H2AFY2 | NM_018649 | 核心组蛋白macroH2A2.2 |
H6PD | NM_004285 | 己糖-6-磷酸脱氢酶前体 |
HARS | NM_002109 | 组氨酰-tRNA合成酶 |
HBP1 | NM_012257 | HMG-盒转录因子1 |
HBS1L | NM_006620 | HBS1样 |
HBXIP | NM_006402 | 乙型肝炎病毒x-相互作用蛋白质 |
HCCS | NM_005333 | 全细胞色素c合酶(细胞色素c |
HCLS1 | NM_005335 | 造血细胞-特异性Lyn底物1 |
HCP5 | NM_006674 | HLA复合体P5 |
HDAC4 | NM_006037 | 组蛋白脱乙酰基酶4 |
HDCMA18P | NM_016648 | 假定蛋白LOC51574 |
HDHD1A | NM_012080 | 卤酸脱卤酶样水解酶结构域 |
HECA | NM_016217 | 头套(headcase) |
HECTD2 | NM_182765 | 含HECT结构域2同种型a |
HEMK1 | NM_016173 | HemK甲基转移酶家族成员1 |
HERPUD2 | NM_022373 | 假定蛋白LOC64224 |
HERV-FRD | NM_207582 | HERV-FRD原病毒祖先Env多蛋白 |
HES2 | NM_019089 | 发状分裂相关增强子同系物2 |
HEY2 | NM_012259 | 具YRPW模体的发状分裂相关增强子 |
HIAT1 | NM_033055 | 海马丰富转录物1 |
HIC2 | NM_015094 | 癌症中高甲基化2 |
HIF1A | NM_001530 | 缺氧-可诱导因子1,α亚基 |
HIG2 | NM_013332 | 缺氧-可诱导蛋白质2 |
HIP1 | NM_005338 | 亨廷顿蛋白相互作用蛋白质1 |
HIP1R | NM_003959 | 亨廷顿蛋白相互作用蛋白质-1相关 |
HIST1H2AG | NM_021064 | H2A组蛋白家族,成员P |
HK1 | NM_000188 | 己糖激酶1同种型HKI |
HLA-DOA | NM_002119 | 主要组织相容性复合体,类II,DO |
HLCS | NM_000411 | 羧化全酶合成酶 |
HLF | NM_002126 | 肝白血病因子 |
HM13 | NM_178582 | 次要组织相容性抗原13同种型4 |
HMGA2 | NM_001015886 | 高迁移率族AT钩2同种型c |
HMGB3 | NM_005342 | 高迁移率族蛋白3 |
HMGCLL1 | NM_019036 | 3-羟甲基-3-甲基戊二酰辅酶A |
HMGN4 | NM_006353 | 高迁移率族核小体结合结构域 |
HMOX1 | NM_002133 | 血红素氧化酶(脱环)1 |
HN1 | NM_001002032 | 血液和神经表达1 |
HNF4G | NM_004133 | 肝细胞核因子4,γ |
HNMT | NM_006895 | 组胺N-甲基转移酶同种型1 |
HNRPH2 | NM_001032393 | 核不均一核糖核蛋白H2 |
HNRPU | NM_004501 | 核不均一核糖核蛋白U |
HNT | NM_016522 | Neurotrimin |
HOOK3 | NM_032410 | 高尔基体相关微管结合蛋白质 |
HOXA3 | NM_030661 | 同源框A3同种型a |
HOXB13 | NM_006361 | 同源框B13 |
HOXB4 | NM_024015 | 同源框B4 |
HP1BP3 | NM_016287 | HP1-BP74 |
HPCAL4 | NM_016257 | 海马钙蛋白样蛋白质4 |
HPGD | NM_000860 | 羟基前列腺素脱氢酶15-(NAD) |
HPS5 | NM_007216 | Hermansky-Pudlak综合征5同种型b |
HRB | NM_004504 | HIV-1Rev结合蛋白质 |
HRB2 | NM_007043 | HIV-1rev结合蛋白2 |
HRBL | NM_006076 | HIV-1Rev结合蛋白质样蛋白质 |
HRH2 | NM_022304 | 组胺受体H2 |
HRH4 | NM_021624 | 组胺H4受体 |
HS2ST1 | NM_012262 | 硫酸乙酰肝素2-O-磺基转移酶1 |
HS3ST4 | NM_006040 | 硫酸乙酰肝素D-葡糖胺 |
HSC20 | NM_172002 | J-类型共-蛋白伴侣HSC20 |
HSD17B7 | NM_016371 | 羟基类固醇(17-β)脱氢酶7 |
HSPA5 | NM_005347 | 热应激70kDa蛋白质5(葡萄糖调节的 |
HSPA6 | NM_002155 | 热应激70kDa蛋白质6(HSP70B′) |
HSPA8 | NM_006597 | 热应激70kDa蛋白质8同种型1 |
HSPC047 | NM_014147 | 假定蛋白LOC29060 |
HSPC065 | NM_014157 | 假定蛋白LOC29070 |
HSPC268 | NM_197964 | 假定蛋白LOC154791 |
HSPH1 | NM_006644 | 热应激105kD |
HTR2A | NM_000621 | 5-羟色胺受体2A |
HUNK | NM_014586 | 激素上调Neu相关激酶 |
HYAL3 | NM_003549 | 透明质酸葡糖胺酶3 |
HYPK | NM_016400 | 亨廷顿蛋白相互作用蛋白质K |
IAPP | NM_000415 | 胰岛淀粉状蛋白多肽前体 |
ICAM4 | NM_001544 | 细胞间黏附分子4同种型1 |
ICMT | NM_012405 | 异戊二烯半胱氨酸羧基1甲基转移酶 |
IFIT1 | NM_001548 | 干扰素-诱导的蛋白质含 |
IFIT3 | NM_001549 | 干扰素-诱导的蛋白质含 |
IFIT5 | NM_012420 | 干扰素-诱导的蛋白质含 |
IFNAR1 | NM_000629 | 干扰素-α受体1前体 |
IFNAR2 | NM_207585 | 干扰素α/β受体2同种型a |
IFRD2 | NM_006764 | 干扰素相关发育调节物2 |
IFT80 | NM_020800 | WD重复结构域56 |
IGF2BP1 | NM_006546 | 胰岛素样生长因子2mRNA结合 |
IGFBP5 | NM_000599 | 胰岛素样生长因子结合蛋白5 |
IGFBP7 | NM_001553 | 胰岛素样生长因子结合蛋白7 |
IGFL3 | NM_207393 | 胰岛素生长因子样家族成员3 |
IHPK1 | NM_001006115 | 肌醇六磷酸激酶1同种型2 |
IKBKB | NM_001556 | κ轻链多肽基因抑制剂 |
IKIP | NM_153687 | IKK相互作用蛋白质同种型1 |
IL10 | NM_000572 | 白细胞介素10前体 |
IL10RA | NM_001558 | 白细胞介素10受体,α前体 |
IL11 | NM_000641 | 白细胞介素11前体 |
IL12RB2 | NM_001559 | 白细胞介素12受体,β2前体 |
IL17E | NM_022789 | 白细胞介素17E同种型1前体 |
IL17F | NM_052872 | 白细胞介素17F前体 |
IL17RB | NM_172234 | 白细胞介素17B受体同种型2前体 |
IL17RD | NM_017563 | 白细胞介素17受体D |
IL1F5 | NM_012275 | 白细胞介素1家族,成员5 |
IL1R1 | NM_000877 | 白细胞介素1受体,类型I前体 |
IL1RAP | NM_002182 | 白细胞介素1受体辅助蛋白同种型 |
IL1RL1 | NM_003856 | 白细胞介素1受体样1同种型2 |
IL23R | NM_144701 | 白细胞介素23受体前体 |
IL27RA | NM_004843 | I类细胞因子受体 |
IL28RA | NM_173065 | 白细胞介素28受体,α同种型3 |
IL6R | NM_000565 | 白细胞介素6受体同种型1前体 |
IL8 | NM_000584 | 白细胞介素8前体 |
ILDR1 | NM_175924 | 含免疫球蛋白样结构域受体 |
ILKAP | NM_176799 | 整联蛋白相连的激酶相关蛋白 |
IMPAD1 | NM_017813 | 肌醇一磷酸酶A3 |
INHBA | NM_002192 | 抑制素βA前体 |
INHBE | NM_031479 | 激活素βE |
INOC1 | NM_017553 | INO80复合体同系物1 |
INPP5B | NM_005540 | 肌醇多磷酸-5-磷酸酶,75kDa |
INPP5F | NM_014937 | 肌醇多磷酸-5-磷酸酶F同种型 |
INTS5 | NM_030628 | 整合子复合体亚基5 |
INTS7 | NM_015434 | 整合子复合体亚基7 |
IPO8 | NM_006390 | 输入蛋白8 |
IPP | NM_005897 | 脑池内A颗粒促多肽 |
IPPK | NM_022755 | 肌醇1,3,4,5,6-五磷酸2-激酶 |
IQCC | NM_018134 | 含IQ模体C |
IQSEC1 | NM_014869 | IQ模体和Sec7结构域1 |
IQSEC2 | NM_015075 | IQ模体和Sec7结构域2 |
IRAK1 | NM_001025242 | 白细胞介素-1受体相关激酶1 |
IRAK4 | NM_016123 | 白细胞介素-1受体相关激酶4 |
IRF1 | NM_002198 | 干扰素调节因子1 |
IRXL1 | NM_173576 | 假定蛋白LOC283078 |
ISG20L1 | NM_022767 | 干扰素刺激的外切核酸酶基因 |
ISGF3G | NM_006084 | 干扰素-刺激的转录因子3, |
ITCH | NM_031483 | 痒同系物E3遍在蛋白蛋白质连接酶 |
ITFG1 | NM_030790 | T细胞免疫调节蛋白质 |
ITGA10 | NM_003637 | 整联蛋白,α10前体 |
ITGA4 | NM_000885 | 整联蛋白α4前体 |
ITGAL | NM_002209 | 整联蛋白αL前体 |
ITGB1 | NM_002211 | 整联蛋白β1同种型1A前体 |
ITGB8 | NM_002214 | 整联蛋白,β8 |
ITGBL1 | NM_004791 | 整联蛋白,β样1(具有EGF样重复 |
ITIH5 | NM_001001851 | 间α胰蛋白酶抑制剂重链 |
ITIH5L | NM_198510 | 假定蛋白LOC347365 |
ITPK1 | NM_014216 | 肌醇1,3,4-三磷酸5/6激酶 |
ITPKB | NM_002221 | 1D-肌醇-三磷酸3-激酶B |
ITSN2 | NM_147152 | 交叉蛋白2同种型2 |
IVNS1ABP | NM_006469 | 流感病毒NS1A结合蛋白同种型a |
IXL | NM_017592 | 雌雄间性样 |
JAZF1 | NM_175061 | 并列锌指基因1 |
JOSD1 | NM_014876 | 假定蛋白LOC9929 |
JRKL | NM_003772 | jerky同系物样 |
JUB | NM_032876 | jub,ajuba同系物同种型1 |
KAL1 | NM_000216 | Kallmann综合征1蛋白质 |
KATNAL1 | NM_001014380 | 剑蛋白p60亚基A样1 |
KBTBD6 | NM_152903 | 含kelch重复和BTB(POZ)结构域6 |
KBTBD8 | NM_032505 | T细胞激活kelch重复蛋白质 |
KCNA7 | NM_031886 | 钾电压门控通道,shaker相关 |
KCNB1 | NM_004975 | 钾电压门控通道,Shab相关 |
KCNH5 | NM_139318 | 钾电压门控通道,亚家族H, |
KCNH6 | NM_030779 | 钾电压门控通道,亚家族H, |
KCNH8 | NM_144633 | 钾电压门控通道,亚家族H, |
KCNJ10 | NM_002241 | 钾内向整流通道,亚家族 |
KCNJ16 | NM_018658 | 钾内向整流通道J16 |
KCNJ8 | NM_004982 | 钾内向整流通道J8 |
KCNJ9 | NM_004983 | 钾内向整流通道亚家族 |
KCNK1 | NM_002245 | 钾通道,亚家族K,成员1 |
KCNK2 | NM_001017424 | 钾通道,亚家族K,成员2同种型 |
KCNK3 | NM_002246 | 钾通道,亚家族K,成员3 |
KCNK6 | NM_004823 | 钾通道,亚家族K,成员6 |
KCNMA1 | NM_001014797 | 大电导钙激活钾 |
KCNQ2 | NM_004518 | 钾电压门控通道KQT样蛋白质 |
KCNRG | NM_199464 | 钾通道调节物同种型2 |
KCNT2 | NM_198503 | 钾通道,亚家族T,成员2 |
KCTD18 | NM_152387 | 钾通道四聚体化结构域 |
KDELC2 | NM_153705 | 含KDEL(Lys-Asp-Glu-Leu)2 |
KEAP1 | NM_012289 | kelch样ECH相关蛋白1 |
KIAA0082 | NM_015050 | 假定蛋白LOC23070 |
KIAA0143 | NM_015137 | 假定蛋白LOC23167 |
KIAA0157 | NM_032182 | 假定蛋白LOC23172 |
KIAA0240 | NM_015349 | 假定蛋白LOC23506 |
KIAA0247 | NM_014734 | 假定蛋白LOC9766 |
KIAA0319 | NM_014809 | KIAA0319 |
KIAA0319L | NM_024874 | 多囊肾病1样同种型a |
KIAA0355 | NM_014686 | 假定蛋白LOC9710 |
KIAA0367 | NM_015225 | 在羧基端包含BNIP2模体的分子 |
KIAA0404 | NM_015104 | 假定蛋白LOC23130 |
KIAA0427 | NM_014772 | 假定蛋白LOC9811 |
KIAA0446 | NM_014655 | 假定蛋白LOC9673 |
KIAA0467 | NM_015284 | KIAA0467蛋白质 |
KIAA0494 | NM_014774 | 假定蛋白LOC9813 |
KIAA0495 | NM_207306 | KIAA0495 |
KIAA0513 | NM_014732 | 假定蛋白LOC9764 |
KIAA0562 | NM_014704 | 甘氨酸-,谷氨酸-, |
KIAA0564 | NM_015058 | 假定蛋白LOC23078同种型a |
KIAA0649 | NM_014811 | 1A6/DRIM(在转移中下调) |
KIAA0664 | NM_015229 | 假定蛋白LOC23277 |
KIAA0773 | NM_001031690 | 假定蛋白LOC9715 |
KIAA0828 | NM_015328 | KIAA0828蛋白质 |
KIAA0831 | NM_014924 | 假定蛋白LOC22863 |
KIAA0889 | NM_152257 | 假定蛋白LOC25781 |
KIAA0892 | NM_015329 | 假定蛋白LOC23383 |
KIAA0895 | NM_015314 | 假定蛋白LOC23366 |
KIAA0922 | NM_015196 | KIAA0922蛋白质 |
KIAA0980 | NM_025176 | 假定蛋白LOC22981 |
KIAA0999 | NM_025164 | KIAA0999蛋白质 |
KIAA1128 | NM_018999 | 颗粒细胞抗血清阳性14 |
KIAA1160 | NM_020701 | 假定蛋白LOC57461 |
KIAA1191 | NM_020444 | 假定蛋白LOC57179 |
KIAA1193 | NM_017550 | 假定蛋白LOC54531 |
KIAA1199 | NM_018689 | KIAA1199 |
KIAA1202 | NM_020717 | 假定蛋白LOC57477 |
KIAA1324 | NM_020775 | 假定蛋白LOC57535 |
KIAA1377 | NM_020802 | 假定蛋白LOC57562 |
KIAA1434 | NM_019593 | 假定蛋白LOC56261 |
KIAA1456 | NM_020844 | 假定蛋白LOC57604 |
KIAA1522 | NM_020888 | 假定蛋白LOC57648 |
KIAA1530 | NM_020894 | 假定蛋白LOC57654 |
KIAA1559 | NM_020917 | 锌指蛋白14样 |
KIAA1598 | NM_018330 | 假定蛋白LOC57698 |
KIAA1600 | NM_020940 | 假定蛋白LOC57700 |
KIAA1609 | NM_020947 | 假定蛋白LOC57707 |
KIAA1618 | NM_020954 | 假定蛋白LOC57714 |
KIAA1627 | NM_020961 | 假定蛋白LOC57721 |
KIAA1641 | NM_020970 | 假定蛋白LOC57730 |
KIAA1706 | NM_030636 | 假定蛋白LOC80820 |
KIAA1727 | NM_033393 | 假定蛋白LOC85462 |
KIAA1826 | NM_032424 | KIAA1826蛋白质 |
KIAA1909 | NM_052909 | 假定蛋白LOC153478 |
KIF11 | NM_004523 | 驱动蛋白家族成员11 |
KIF13B | NM_015254 | 驱动蛋白家族成员13B |
KIF14 | NM_014875 | 驱动蛋白家族成员14 |
KIF1A | NM_004321 | 突触小泡的轴突转运 |
KIF1B | NM_015074 | 驱动蛋白家族成员1B同种型b |
KIF23 | NM_004856 | 驱动蛋白家族成员23同种型2 |
KIF3B | NM_004798 | 驱动蛋白家族成员3B |
KIF3C | NM_002254 | 驱动蛋白家族成员3C |
KIF5A | NM_004984 | 驱动蛋白家族成员5A |
KIF9 | NM-022342 | 驱动蛋白家族成员9同种型1 |
KIRREL | NM_018240 | IRRE同族样 |
KIT | NM_000222 | v-kit Hardy-Zuckerman 4猫肉瘤病毒 |
KLC3 | NM_145275 | 驱动蛋白轻链2样同种型b |
KLF10 | NM_001032282 | Kruppel样因子10同种型b |
KLF11 | NM_003597 | Kruppel样因子11 |
KLF12 | NM_007249 | Kruppel样因子12同种型a |
KLF13 | NM_015995 | Kruppel样因子13 |
KLF17 | NM_173484 | 锌指蛋白393 |
KLF9 | NM_001206 | Kruppel样因子9 |
KLHDC5 | NM_020782 | 含kelch结构域5 |
KLHDC6 | NM_207335 | 假定蛋白LOC166348 |
KLHL12 | NM_021633 | kelch样12 |
KLHL2 | NM_007246 | kelch样2,Mayven |
KLHL20 | NM_014458 | kelch样20 |
KLHL21 | NM_014851 | kelch样21 |
KLHL22 | NM_032775 | kelch样 |
KLHL23 | NM_144711 | kelch样23 |
KLHL3 | NM_017415 | kelch样3(果蝇) |
KLHL8 | NM_020803 | kelch样8 |
KLK5 | NM_012427 | 激肽释放酶5前蛋白原 |
KLK7 | NM_005046 | 角化层糜蛋白酶 |
KLRK1 | NM_007360 | NKG2-D类型II整合膜蛋白质 |
KMO | NM_003679 | 犬尿氨酸3-单加氧酶 |
KPNA2 | NM_002266 | 核周蛋白(karyopherin)α2 |
KPNA3 | NM_002267 | 核周蛋白α3 |
KPNA4 | NM_002268 | 核周蛋白α4 |
KRIT1 | NM_001013406 | krev相互作用捕获的1同种型2 |
KRT10 | NM_000421 | 角蛋白10 |
KRT23 | NM_015515 | 角蛋白23 |
KRT2A | NM_000423 | 角蛋白2a |
KRT2B | NM_015848 | 细胞角蛋白2 |
KRT6IRS | NM_033448 | 角蛋白6irs |
KRTAP10-4 | NM_198687 | 角蛋白相关蛋白10-4 |
KRTHB1 | NM_002281 | 角蛋白,毛发,碱性的,1 |
KRTHB5 | NM_002283 | 角蛋白,毛发,碱性的,5 |
KTI12 | NM_138417 | KTI12同系物,染色质相关的 |
L2HGDH | NM_024884 | 假定蛋白LOC79944 |
L3MBTL2 | NM_001003689 | 1(3)mbt样2同种型b |
L3MBTL3 | NM_001007102 | 1(3)mbt样3同种型b |
L3MBTL4 | NM_173464 | 假定蛋白LOC91133 |
LACE1 | NM_145315 | 促泌乳1 |
LALBA | NM_002289 | 乳清蛋白,α-前体 |
LAMA3 | NM_000227 | 层粘连蛋白α3亚基同种型2 |
LAMC1 | NM_002293 | 层粘连蛋白,γ1前体 |
LAMC2 | NM_018891 | 层粘连蛋白,γ2同种型b前体 |
LAMP1 | NM_005561 | 溶酶体相关膜蛋白质1 |
LAMP2 | NM_013995 | 溶酶体相关膜蛋白质2 |
LAMP3 | NM_014398 | 溶酶体相关膜蛋白质3 |
LAPTM4A | NM_014713 | 溶酶体相关蛋白跨膜4 |
LARP2 | NM_018078 | La核糖核蛋白结构域家族成员2 |
LARP5 | NM_015155 | La核糖核蛋白结构域家族,成员5 |
LASP1 | NM_006148 | LIM和SH3蛋白质1 |
LASS2 | NM_013384 | LAG1确保长寿同系物2同种型2 |
LASS3 | NM_178842 | 假定蛋白LOC204219 |
LASS6 | NM_203463 | 确保长寿同系物6 |
LAX1 | NM_017773 | 淋巴细胞跨膜衔接因子1 |
LBH | NM_030915 | 假定蛋白DKFZp566J091 |
LDLR | NM_000527 | 低密度脂蛋白质受体前体 |
LDLRAD3 | NM_174902 | 假定蛋白LOC143458 |
LDLRAP1 | NM_015627 | 低密度脂蛋白质受体衔接蛋白 |
LDOC1L | NM_032287 | 假定蛋白LOC84247 |
LEP | NM_000230 | 瘦蛋白前体 |
LEPREL1 | NM_018192 | leprecan样1 |
LEPROT | NM_017526 | 瘦蛋白受体基因相关蛋白质 |
LEPROTL1 | NM_015344 | 瘦蛋白受体重叠转录物样1 |
LETM1 | NM_012318 | 含亮氨酸拉链-EF-手跨膜 |
LGALS8 | NM_006499 | 半乳凝素8同种型a |
LHFP | NM_005780 | 脂肪瘤HMGIC融合伴侣 |
LHFPL2 | NM_005779 | 脂肪瘤HMGIC融合伴侣样2 |
LHFPL3 | NM_199000 | 脂肪瘤HMGIC融合伴侣样3 |
LHX6 | NM_014368 | LIM同源框蛋白质6同种型1 |
LHX8 | NM_001001933 | LIM同源框8 |
LIAS | NM_006859 | 硫辛酸合成酶同种型1前体 |
LIF | NM_002309 | 白血病抑制因子(胆碱能 |
LILRA5 | NM_181986 | 白细胞免疫球蛋白样受体亚家族 |
LILRB1 | NM_006669 | 白细胞免疫球蛋白样受体, |
LIMA1 | NM_016357 | 肿瘤中丧失的上皮蛋白质β |
LIMK1 | NM_002314 | LIM结构域激酶1同种型1 |
LIN10 | NM_025187 | lin-10 |
LIN28 | NM_024674 | lin-28同系物 |
LIN7B | NM_022165 | lin-7同系物B |
LINS1 | NM_181740 | 种系同系物1同种型3 |
LIPH | NM_139248 | 脂肪酶,成员H前体 |
LITAF | NM_004862 | LPS-诱导的TNF-α因子 |
LMO2 | NM_005574 | 只有LIM结构域2 |
LMO3 | NM_001001395 | 只有LIM结构域3 |
LMOD3 | NM_198271 | 平滑肌蛋白3(胎儿) |
LNK | NM_005475 | 淋巴细胞衔接蛋白 |
LOC116143 | NM_138458 | 单分体 |
LOC116236 | NM_198147 | 假定蛋白LOC116236 |
LOC123688 | NM_001013619 | 假定蛋白LOC123688 |
LOC124751 | NM_213597 | 假定蛋白LOC124751 |
LOC126248 | NM_173479 | 假定蛋白LOC126248 |
LOC128439 | NM_139016 | 假定蛋白LOC128439 |
LOC129285 | NM_152994 | 平滑肌肌球蛋白重链11同种型 |
LOC130951 | NM_138804 | 假定蛋白LOC130951 |
LOC133619 | NM_130809 | 假定蛋白LOC133619 |
LOC134147 | NM_138809 | 假定蛋白LOC134147 |
LOC136263 | NM_145268 | 假定蛋白LOC136263 |
LOC148137 | NM_144692 | 假定蛋白LOC148137 |
LOC149620 | NM_001013621 | 假定蛋白LOC149620 |
LOC151194 | NM_145280 | 假定蛋白LOC151194 |
LOC153222 | NM_153607 | 假定蛋白LOC153222 |
LOC153561 | NM_207331 | 假定蛋白LOC153561 |
LOC158160 | NM_001031744 | 17-β-羟基类固醇脱氢酶型 |
LOC162427 | NM_178126 | 假定蛋白LOC162427 |
LOC168850 | NM_176814 | 假定蛋白LOC168850 |
LOC201895 | NM_174921 | 假定蛋白LOC201895 |
LOC203427 | NM_145305 | 线粒体溶质运载体蛋白质 |
LOC203547 | NM_001017980 | 假定蛋白LOC203547 |
LOC220594 | NM_145809 | TL132蛋白质 |
LOC221091 | NM_203422 | 假定蛋白LOC221091 |
LOC222171 | NM_175887 | 假定蛋白LOC222171 |
LOC223075 | NM_194300 | 假定蛋白LOC223075 |
LOC283537 | NM_181785 | 假定蛋白LOC283537 |
LOC283551 | NM_001012706 | 假定蛋白LOC283551 |
LOC283849 | NM_178516 | 假定蛋白LOC283849 |
LOC284434 | NM_001007525 | 假定蛋白LOC284434 |
LOC284912 | NM_203375 | 假定蛋白LOC284912 |
LOC285382 | NM_001025266 | 假定蛋白LOC285382 |
LOC285636 | NM_175921 | 假定蛋白LOC285636 |
LOC338328 | NM_178172 | 高密度脂蛋白质结合蛋白质 |
LOC339745 | NM_001001664 | 假定蛋白LOC339745 |
LOC340843 | NM_001013629 | 假定蛋白LOC340843 |
LOC347273 | NM_001018116 | 假定蛋白LOC347273 |
LOC348262 | NM_207368 | 假定蛋白LOC348262 |
LOC387758 | NM_203371 | 假定蛋白LOC387758 |
LOC387790 | NM_001013634 | 假定蛋白LOC387790 |
LOC387873 | NM_001013636 | 假定蛋白LOC387873 |
LOC387882 | NM_207376 | 假定蛋白LOC387882 |
LOC387921 | NM_001012754 | 假定蛋白LOC387921同种型a |
LOC388335 | NM_001004313 | 假定蛋白LOC388335 |
LOC388610 | NM_001013642 | 假定蛋白LOC388610 |
LOC388969 | NM_001013649 | 假定蛋白LOC388969 |
LOC389432 | NM_001030060 | 假定蛋白LOC389432 |
LOC389634 | NM_001012988 | 假定蛋白LOC389634 |
LOC389936 | NM_001013656 | 假定蛋白LOC389936 |
LOC390980 | NM_001023563 | 类似于锌指蛋白264 |
LOC399706 | NM_001010910 | 假定蛋白LOC399706 |
LOC400464 | NM_001013670 | 假定蛋白LOC400464 |
LOC400499 | NM_001013671 | 假定蛋白LOC400499 |
LOC401137 | NM_214711 | 假定蛋白LOC401137 |
LOC401152 | NM_001001701 | 假定蛋白LOC401152 |
LOC401410 | NM_001008742 | 假定蛋白LOC401410 |
LOC401431 | NM_001008745 | 假定蛋白LOC401431 |
LOC401507 | NM_001012278 | 假定蛋白LOC401507 |
LOC401589 | NM_001013687 | 假定蛋白LOC401589 |
LOC401620 | NM_001013688 | 假定蛋白LOC401620 |
LOC402176 | NM_001011538 | 假定蛋白LOC402176 |
LOC440248 | NM_199045 | 假定蛋白LOC440248 |
LOC440742 | NM_001013710 | 假定蛋白LOC440742 |
LOC441136 | NM_001013719 | 假定蛋白LOC441136 |
LOC441208 | NM-001013723 | 假定蛋白LOC441208 |
LOC441268 | NM_001013725 | 假定蛋白LOC441268 |
LOC441376 | NM_001025357 | 假定蛋白LOC441376 |
LOC442578 | NM_001013739 | 假定蛋白LOC442578 |
LOC493829 | NM_001008274 | 假定蛋白LOC493829 |
LOC51149 | NM_001017987 | 假定蛋白LOC51149同种型2 |
LOC51333 | NM_016643 | 间充质干细胞蛋白质DSC43 |
LOC51334 | NM_016644 | 间充质干细胞蛋白质DSC54 |
LOC554251 | NM_001024680 | 假定蛋白LOC554251 |
LOC57149 | NM_020424 | 假定蛋白LOC57149 |
LOC613206 | NM_001033016 | 骨髓增生性疾病相关肿瘤 |
LOC613266 | NM_001033516 | 假定蛋白LOC613266 |
LOC619208 | NM_001033564 | 假定蛋白LOC619208 |
LOC63928 | NM_022097 | 肝细胞癌抗原基因520 |
LOC63929 | NM_022098 | 假定蛋白LOC63929 |
LOC81558 | NM_030802 | C/EBP-诱导的蛋白质 |
LOC90321 | NM_001010851 | 假定蛋白LOC90321 |
LOC90624 | NM_181705 | 假定蛋白LOC90624 |
LOC90639 | NM_001031617 | 假定蛋白LOC90639 |
LOC94431 | NM_145237 | 假定蛋白LOC94431 |
LONPL | NM_031490 | 过氧化物酶体LON蛋白酶样 |
LPGAT1 | NM_014873 | 溶血磷脂酰甘油酰基转移酶1 |
LPHN3 | NM_015236 | 蛛毒素受体3前体 |
LPIN1 | NM_145693 | 脂质1 |
LPIN3 | NM_022896 | 脂质3 |
LRAP | NM_022350 | 白细胞源性精氨酸氨基肽酶 |
LRAT | NM_004744 | 卵磷脂视黄醇酰基转移酶 |
LRFN5 | NM_152447 | 亮氨酸丰富重复和纤连蛋白类型III |
LRG1 | NM_052972 | 亮氨酸丰富α-2-糖蛋白1 |
LRIG1 | NM_015541 | 亮氨酸丰富重复和免疫球蛋白样 |
LRP1 | NM_002332 | 低密度脂蛋白质相关蛋白1 |
LRP12 | NM_013437 | 阻抑致瘤性 |
LRP1B | NM_018557 | 低密度脂蛋白质相关蛋白1B |
LRP2BP | NM_018409 | LRP2结合蛋白质 |
LRP4 | NM_002334 | 低密度脂蛋白质受体相关蛋白质 |
LRRC10 | NM_201550 | 含亮氨酸丰富重复10 |
LRRC15 | NM_130830 | 含亮氨酸丰富重复15 |
LRRC2 | NM_024512 | 含亮氨酸丰富重复2 |
LRRC20 | NM_018205 | 含亮氨酸丰富重复20同种型3 |
LRRC27 | NM_030626 | 含亮氨酸丰富重复27 |
LRRC32 | NM_005512 | 含亮氨酸丰富重复32前体 |
LRRC44 | NM_145258 | 含亮氨酸丰富重复44 |
LRRC45 | NM_144999 | 含亮氨酸丰富重复45 |
LRRC54 | NM_015516 | Tsukushi |
LRRC55 | NM_001005210 | 假定蛋白LOC219527 |
LRRC57 | NM_153260 | 假定蛋白LOC255252 |
LRRC8A | NM_019594 | 含亮氨酸丰富重复8 |
LRRC8B | NM_015350 | T细胞活化亮氨酸重复丰富蛋白质 |
LRRIQ2 | NM_024548 | 含亮氨酸丰富重复和IQ模体2 |
LRRN6A | NM_032808 | 亮氨酸丰富重复神经元6A |
LSM11 | NM_173491 | LSM11,U7小的核RNA相关的 |
LSM12 | NM_152344 | 假定蛋白LOC124801 |
LTB4R | NM_181657 | 白三烯B4受体 |
LTBP2 | NM_000428 | 潜伏转化生长因子β结合 |
LTBR | NM_002342 | 淋巴毒素β受体 |
LTV1 | NM_032860 | 假定蛋白LOC84946 |
LUZP1 | NM_033631 | 亮氨酸拉链蛋白质1 |
LY75 | NM_002349 | 淋巴细胞抗原75 |
LYCAT | NM_001002257 | 溶血心磷脂酰基转移酶同种型2 |
LYST | NM_000081 | 溶酶体转运调解物同种型1 |
M6PR | NM_002355 | 阳离子依赖性甘露糖-6-磷酸受体 |
M6PRBP1 | NM_005817 | 甘露糖6磷酸受体结合蛋白1 |
MAF1 | NM_032272 | MAF1蛋白质 |
MAFF | NM_012323 | 转录因子MAFF |
MAGI2 | NM_012301 | 膜结合的乌苷酸激酶,WW和PDZ |
MAK | NM_005906 | 雄性生殖细胞相关激酶 |
MAL2 | NM_052886 | mal,T细胞分化蛋白质2 |
MAN1A2 | NM_006699 | 甘露糖苷酶,α,类1A,成员2 |
MAN2A2 | NM_006122 | 甘露糖苷酶,α,类2A,成员2 |
MANEAL | NM_152496 | 假定蛋白LOC149175同种型2 |
MAP1LC3B | NM_022818 | 微管相关蛋白1A/1B轻链 |
MAP3K11 | NM_002419 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K12 | NM_006301 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K14 | NM_003954 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K2 | NM_006609 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K3 | NM_002401 | 促分裂原活化蛋白质激酶激酶激酶3 |
MAP3K5 | NM_005923 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K7 | NM_003188 | 促分裂原活化蛋白质激酶激酶激酶7 |
MAP3K8 | NM_005204 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP3K9 | NM_033141 | 促分裂原活化蛋白质激酶激酶激酶 |
MAP6 | NM_207577 | 微管相关蛋白6同种型2 |
MAP7 | NM_003980 | 微管相关蛋白7 |
MAPK1 | NM_002745 | 促分裂原活化蛋白质激酶1 |
MAPK4 | NM_002747 | 促分裂原活化蛋白质激酶4 |
MAPK9 | NM_002752 | 促分裂原活化蛋白质激酶9同种型1 |
MAPKBP1 | NM_014994 | 促分裂原活化蛋白质激酶结合蛋白质 |
MAPRE1 | NM_012325 | 微管相关蛋白,RP/EB家族, |
MAPRE3 | NM_012326 | 微管相关蛋白,RP/EB家族, |
MARCH2 | NM_001005415 | 膜相关环指(C3HC4)2 |
MARCH5 | NM_017824 | 环指蛋白153 |
MARCH6 | NM_005885 | 膜相关环指(C3HC4)6 |
MARCH7 | NM_022826 | Axotrophin |
MARCH8 | NM_001002265 | 免疫识别细胞调节剂 |
MARK1 | NM_018650 | MAP/微管亲和力调节激酶1 |
MARK4 | NM_031417 | MAP/微管亲和力调节激酶4 |
MARS | NM_004990 | 甲硫氨酸-tRNA合成酶 |
MARVELD3 | NM_001017967 | 含MARVEL结构域3同种型1 |
MASTL | NM_032844 | 微管相关的丝氨酸/苏氨酸 |
MAT2B | NM_013283 | 甲硫氨酸腺苷转移酶II,β同种型 |
MAWBP | NM_022129 | MAWD结合蛋白同种型a |
MBD5 | NM_018328 | 甲基-CpG结合结构域蛋白质5 |
MBNL1 | NM_021038 | 盲肌样1同种型a |
MBNL3 | NM_018388 | 盲肌样3同种型G |
MBP | NM_001025100 | Golli-mbp同种型2 |
MBTD1 | NM_017643 | 含mbt结构域1 |
MBTPS1 | NM_003791 | 膜结合转录因子位点-1 |
MCAM | NM_006500 | 黑素瘤细胞黏着分子 |
MCF2L2 | NM_015078 | Rho家族鸟嘌呤-核苷酸交换因子 |
MCFD2 | NM_139279 | 多种凝血因子缺乏2 |
MCL1 | NM_021960 | 髓样细胞白血病序列1同种型1 |
MCM3 | NM_002388 | 微小染色体维持蛋白质3 |
MCM4 | NM_005914 | 微小染色体维持蛋白质4 |
MCMDC1 | NM_153255 | 微小染色体维持蛋白质结构域 |
MCOLN2 | NM_153259 | 粘脂蛋白2 |
MDFIC | NM_199072 | 含MyoD家族抑制剂结构域同种型 |
MDM4 | NM_002393 | 鼠双微体4同系物 |
MECP2 | NM_004992 | 甲基CpG结合蛋白2 |
MECR | NM_001024732 | 核受体结合因子1同种型b |
MED12L | NM_053002 | 假定蛋白LOC116931 |
MED18 | NM_017638 | RNA聚合酶II转录介导物, |
MED6 | NM_005466 | RNA聚合酶II转录介导物, |
METAP1 | NM_015143 | 甲硫氨酰氨基肽酶1 |
METT5D1 | NM_152636 | 含甲基转移酶5结构域1 |
METTL2A | NM_001005372 | 假定蛋白LOC339175 |
METTL4 | NM_022840 | 甲基转移酶样4 |
MFAP3L | NM_001009554 | 微原纤维相关蛋白3样同种型 |
MFAP5 | NM_003480 | 微原纤维相关蛋白5 |
MFN2 | NM_014874 | 线粒体融合蛋白2 |
MFSD4 | NM_181644 | 假定蛋白DKFZp761N1114 |
MGC11266 | NM_024322 | 假定蛋白LOC79172 |
MGC11332 | NM_032718 | 假定蛋白LOC84804 |
MGC13017 | NM_080656 | 假定蛋白LOC91368 |
MGC15476 | NM_145056 | 胸腺表达基因3样 |
MGC15619 | NM_032369 | 假定蛋白LOC84329 |
MGC16291 | NM_032770 | 假定蛋白LOC84856 |
MGC16385 | NM_145039 | 假定蛋白LOC92806 |
MGC16703 | NM_145042 | 假定蛋白LOC113691 |
MGC19604 | NM_001031734 | 假定蛋白LOC112812同种型1 |
MGC22001 | NM_153238 | 假定蛋白LOC197196 |
MGC24039 | NM_144973 | 假定蛋白LOC160518 |
MGC26718 | NM_001029999 | 假定蛋白LOC440482 |
MGC26733 | NM_144992 | 假定蛋白LOC200403 |
MGC26816 | NM_152613 | 假定蛋白LOC164684 |
MGC2752 | NM_023939 | 假定蛋白LOC65996 |
MGC29891 | NM_144618 | GA重复结合蛋白质,β2 |
MGC3123 | NM_024107 | 假定蛋白LOC79089同种型1 |
MGC32020 | NM_152266 | 假定蛋白LOC91442 |
MGC3207 | NM_001031727 | 假定蛋白LOC84245同种型1 |
MGC34646 | NM_173519 | 假定蛋白LOC157807 |
MGC34821 | NM_173586 | 假定蛋白LOC283238 |
MGC35048 | NM_153208 | 假定蛋白LOC124152 |
MGC35440 | NM_153220 | 假定蛋白LOC147990 |
MGC39518 | NM_173822 | 假定蛋白LOC285172 |
MGC40069 | NM_182615 | 假定蛋白LOC348035 |
MGC40405 | NM_152789 | 假定蛋白LOC257415 |
MGC42090 | NM_152774 | 假定蛋白LOC256130 |
MGC4268 | NM_031445 | 假定蛋白LOC83607 |
MGC45438 | NM_152459 | 假定蛋白LOC146556 |
MGC4562 | NM_133375 | 假定蛋白LOC115752 |
MGC4655 | NM_033309 | 假定蛋白LOC84752 |
MGC48628 | NM_207491 | 假定蛋白LOC401145 |
MGC50372 | NM_173566 | 假定蛋白LOC253143 |
MGC52057 | NM_194317 | 假定蛋白LOC130574 |
MGC52110 | NM_001008215 | 假定蛋白LOC493753 |
MGC52498 | NM_182621 | 假定蛋白LOC348378 |
MGC70857 | NM_001001795 | 假定蛋白LOC414919 |
MGC87631 | NM_001004306 | 假定蛋白LOC339184 |
MGC9712 | NM_152689 | 假定蛋白LOC202915 |
MGEA5 | NM_012215 | 脑膜瘤表达的抗原5(透明质酸酶) |
MGLL | NM_001003794 | 单甘油酯脂肪酶同种型2 |
MICA | NM_000247 | MHC I类链相关基因A蛋白质 |
MICB | NM_005931 | MHC I类多肽相关序列B |
MIDN | NM_177401 | 中脑核仁蛋白 |
MINK1 | NM_001024937 | 畸形/NIK相关激酶同种型4 |
MKI67 | NM_002417 | 通过单克隆抗体Ki-67鉴定的抗原 |
MKL2 | NM_014048 | 成巨核细胞白血病2蛋白质 |
MKLN1 | NM_013255 | muskelin1,含细胞内介导物 |
MKNK2 | NM_017572 | MAP激酶-相互作用丝氨酸/苏氨酸激酶2 |
MKRN1 | NM_013446 | makorin,环指蛋白,1 |
MLC1 | NM_015166 | 巨脑白质脑病含 |
MLL3 | NM_021230 | 髓/淋巴或混合谱系白血病3 |
MLL4 | NM_014727 | 髓/淋巴或混合谱系白血病4 |
MLLT10 | NM_001009569 | 髓/淋巴或混合谱系白血病 |
MLLT11 | NM_006818 | MLLT11蛋白质 |
MLLT6 | NM_005937 | 髓/淋巴或混合谱系白血病 |
MLR1 | NM_153686 | 转录因子MLR1 |
MMACHC | NM_015506 | 假定蛋白LOC25974 |
MME | NM_000902 | 膜金属内肽酶 |
MMP19 | NM_001032360 | 基质金属蛋白酶19同种型2前体 |
MMP2 | NM_004530 | 基质金属蛋白酶2前蛋白原 |
MMP23A | NM_004659 | 基质金属蛋白酶23A前体 |
MMP23B | NM_006983 | 基质金属蛋白酶23B前体 |
MMP24 | NM_006690 | 基质金属蛋白酶24前蛋白原 |
MMP3 | NM_002422 | 基质金属蛋白酶3前蛋白原 |
MMRN2 | NM_024756 | 多聚素2 |
MOBKL1A | NM_173468 | MOB1,Mps One Binder激酶激活物样1A |
MOCS1 | NM_005943 | 钼辅因子合成-步骤1蛋白质 |
MOG | NM_001008228 | 髓鞘少突胶质细胞糖蛋白同种型 |
MOGAT3 | NM_178176 | 单酰基甘油O-酰基转移酶3 |
MORF4L1 | NM_006791 | MORF相关基因15同种型1 |
MORF4L2 | NM_012286 | MORF相关基因X |
MPPE1 | NM_023075 | 金属磷酯酶1同种型a前体 |
MPZ | NM_000530 | 髓鞘蛋白零 |
MRAS | NM_012219 | 肌肉RAS癌基因同系物 |
MRCL3 | NM_006471 | 肌球蛋白调节性轻链MRCL3 |
MRE11A | NM_005590 | 减数分裂重组11同系物A同种型2 |
MRGPRX3 | NM_054031 | G蛋白偶联受体MRGX3 |
MRP63 | NM_024026 | 线粒体核糖体蛋白质63 |
MRPL17 | NM_022061 | 线粒体核糖体蛋白质L17 |
MRPL24 | NM_024540 | 线粒体核糖体蛋白质L24 |
MRPL30 | NM_145212 | 线粒体核糖体蛋白质L30 |
MRPL43 | NM_032112 | 线粒体核糖体蛋白质L43同种型a |
MRPL47 | NM_020409 | 线粒体核糖体蛋白质L47同种型a |
MRPL49 | NM_004927 | 线粒体核糖体蛋白质L49 |
MRPL52 | NM_178336 | 线粒体核糖体蛋白质L52同种型a |
MRPS10 | NM_018141 | 线粒体核糖体蛋白质S10 |
MRPS16 | NM_016065 | 线粒体核糖体蛋白质S16 |
MRPS18B | NM_014046 | 线粒体核糖体蛋白质S18B |
MRPS25 | NM_022497 | 线粒体核糖体蛋白质S25 |
MRPS36 | NM_033281 | 线粒体核糖体蛋白质S36 |
MRRF | NM_138777 | 线粒体核糖体再循环因子同种型 |
MS4A10 | NM_206893 | 跨膜4结构域,亚家族A,成员 |
MS4A7 | NM_021201 | 跨膜4结构域,亚家族A,成员 |
MSH3 | NM_002439 | mutS同系物3 |
MSL2L1 | NM_018133 | 环指蛋白184 |
MSR1 | NM_138715 | 巨噬细胞清除剂受体1同种型类型1 |
MSRB3 | NM_001031679 | 甲硫氨酸亚砜还原酶B3同种型2 |
MST150 | NM_032947 | 假定的小的膜蛋白质NID67 |
MSTO1 | NM_018116 | Misato |
MTAC2D1 | NM_152332 | 含膜靶向(串联)C2结构域 |
MTCH2 | NM_014342 | 线粒体运载体同系物2 |
MTERFD2 | NM_182501 | 含MTERF结构域2 |
MTF1 | NM_005955 | 金属-调节转录因子1 |
MTFMT | NM_139242 | 甲硫氨酰-tRNA甲酸基转移酶,线粒体 |
MTHFD1L | NM_015440 | 亚甲基四氢叶酸脱氢酶(NADP+ |
MTHFD2 | NM_006636 | 亚甲基四氢叶酸脱氢酶脱氢酶2 |
MTMR12 | NM_019061 | 肌管素相关蛋白12 |
MTMR3 | NM_021090 | 肌管素相关蛋白3同种型c |
MTMR7 | NM_004686 | 肌管素相关蛋白7 |
MTMR9 | NM_015458 | 肌管素相关蛋白9 |
MUC17 | NM_001004430 | 黏蛋白17 |
MUCDHL | NM_017717 | mu-原钙黏着蛋白同种型2 |
MULK | NM_018238 | 多底物脂质激酶 |
MUM1L1 | NM_152423 | 黑素瘤相关的抗原(突变的)1样1 |
MUTED | NM_201280 | Muted |
MVK | NM_000431 | 甲羟戊酸激酶 |
MXD1 | NM_002357 | MAX二聚化蛋白质1 |
MXI1 | NM_001008541 | MAX相互作用分子1同种型c |
MXRA7 | NM_001008529 | 跨膜锚定蛋白质1同种型2 |
MYADM | NM_001020818 | 髓相关分化标志物 |
MYCL1 | NM_001033081 | 1-myc-1原癌基因同种型1 |
MYCN | NM_005378 | v-myc髓细胞瘤病病毒相关癌基因, |
MYF5 | NM_005593 | 生肌因子5 |
MYF6 | NM_002469 | 生肌因子6(力蛋白) |
MYLIP | NM_013262 | 肌球蛋白调节性轻链相互作用 |
MYLK | NM_005965 | 肌球蛋白轻链激酶同种型6 |
MYNN | NM_018657 | 肌神经蛋白 |
MYO10 | NM_012334 | 肌球蛋白X |
MYO18A | NM_078471 | 肌球蛋白18A同种型a |
MYO1C | NM_033375 | 肌球蛋白IC |
MYO1D | NM_015194 | 肌球蛋白ID |
MYO3B | NM_138995 | 肌球蛋白IIIB |
MYOHD1 | NM_001033579 | 含肌球蛋白头结构域1同种型2 |
MYOM1 | NM_003803 | 肌中线蛋白1 |
MYOZ2 | NM_016599 | myozenin2 |
MYOZ3 | NM_133371 | myozenin3 |
MYT1L | NM_015025 | 髓鞘转录因子1样 |
N4BP1 | NM_153029 | Nedd4结合蛋白1 |
N4BP2 | NM_018177 | Nedd4结合蛋白2 |
NAGK | NM_017567 | N-乙酰葡糖胺激酶 |
NANOS1 | NM_001009553 | 纳米同系物1同种型2 |
NAPB | NM_022080 | N-乙基马来酰亚胺敏感因子附着 |
NAPE-PLD | NM_198990 | N-酰基-磷脂酰乙醇胺-水解性 |
NARG1L | NM_018527 | NMDA受体调节的1样蛋白质同种型 |
NARS | NM_004539 | 天冬酰胺酰-tRNA合成酶 |
NAT11 | NM_024771 | 假定蛋白LOC79829 |
NAT12 | NM_001011713 | 假定蛋白LOC122830 |
NAV2 | NM_145117 | 神经元导向2同种型2 |
NBEA | NM_015678 | 激酶固定蛋白(neurobeachin) |
NBEAL1 | NM_198945 | 激酶固定蛋白样1 |
NBL1 | NM_005380 | 神经母细胞瘤,阻抑致瘤性1 |
NBPF4 | NM_152488 | 假定蛋白LOC148545 |
NBR1 | NM_005899 | BRCA1近邻基因1 |
NBR2 | NM_005821 | 假定蛋白LOC10230 |
NCF2 | NM_000433 | 嗜中性粒细胞胞质因子2 |
NCK2 | NM_001004720 | NCK衔接蛋白2同种型A |
NCKAP1L | NM_005337 | 造血蛋白质1 |
NCOA3 | NM_006534 | 核受体辅激活物3同种型b |
NCOA7 | NM_181782 | 核受体辅激活物7 |
NCR1 | NM_004829 | 天然细胞毒性触发受体1 |
NDEL1 | NM_001025579 | nudE核分布基因E同系物样1 |
NDN | NM_002487 | 抑蛋白 |
NDUFA6 | NM_002490 | NADH脱氢酶(泛醌)1α |
NDUFC2 | NM_004549 | NADH脱氢酶(泛醌)1,亚复合体 |
NDUFV3 | NM_001001503 | NADH-泛醌氧化还原酶黄素蛋白3 |
NEB | NM_004543 | 伴肌动蛋白 |
NEBL | NM_006393 | nebulette肌节同种型 |
NEDD4L | NM_015277 | 遍在蛋白-蛋白质连接酶NEDD4样 |
NEFH | NM_021076 | 神经丝,重链多肽200kDa |
NEK8 | NM_178170 | NIMA相关激酶8 |
NEK9 | NM_033116 | NIMA相关激酶9 |
NENF | NM_013349 | SCIRP10相关蛋白质 |
NEO1 | NM_002499 | 再生蛋白同系物1 |
NETO2 | NM_018092 | 神经毡蛋白和tolloid样蛋白质2 |
NEUROG1 | NM_006161 | 神经元素1 |
NEUROG2 | NM_024019 | 神经元素2 |
NF2 | NM_000268 | 神经纤维瘤蛋白2同种型1 |
NFASC | NM_015090 | 神经束蛋白前体 |
NFAT5 | NM_006599 | 活化T细胞核因子5同种型c |
NFATC1 | NM_172387 | 活化T细胞核因子,胞质的 |
NFATC2IP | NM_032815 | 活化T细胞核因子, |
NFATC3 | NM_173164 | 细胞质活化T细胞核因子 |
NFATC4 | NM_004554 | 细胞质活化T细胞核因子 |
NFE2L2 | NM_006164 | 核因子(红细胞派生2)样2 |
NFIA | NM_005595 | 核因子I/A |
NFKBIB | NM_001001716 | κ轻链多肽基因核因子 |
NFKBIL2 | NM_013432 | I-κ-B相关蛋白质 |
NFX1 | NM_147134 | 核转录因子,X-盒结合1 |
NFYB | NM_006166 | 核转录因子Y,β |
NGEF | NM_019850 | 神经元鸟嘌呤核苷酸交换因子 |
NHLH1 | NM_005598 | 无义螺旋环螺旋1 |
NHS | NM_198270 | Nance-Horan综合征蛋白质 |
NIN | NM_020921 | ninein同种型2 |
NINJ2 | NM_016533 | ninjurin2 |
NIP30 | NM_024946 | 假定蛋白LOC80011 |
NIP7 | NM_016101 | 60S核糖体亚基生物发生蛋白质NIP7 |
NIPA1 | NM_144599 | Prader-Willi/Angelman综合征非印记 |
NKIRAS1 | NM_020345 | κB-ras 1 |
NKIRAS2 | NM_001001349 | NFKB抑制剂相互作用Ras样2 |
NKX2-2 | NM_002509 | NK2转录因子相关,基因座2 |
NKX3-1 | NM_006167 | NK3转录因子相关,基因座1 |
NLK | NM_016231 | nemo样激酶 |
NMD3 | NM_015938 | NMD3同系物 |
NME6 | NM_005793 | 核苷二磷酸激酶类型6 |
NMNAT1 | NM_022787 | 烟酰胺核苷酸腺苷酰转移酶1 |
NMT1 | NM_021079 | N-豆蔻酰转移酶1 |
NMT2 | NM_004808 | 甘氨酰肽N-十四酰转移酶2 |
NMUR1 | NM_006056 | 神经调节肽U受体1 |
NMUR2 | NM_020167 | 神经调节肽U受体2 |
NOL9 | NM_024654 | 假定蛋白LOC79707 |
NOM1 | NM_138400 | 具MIF4G结构域核仁蛋白质1 |
NOS1AP | NM_014697 | 一氧化氮合酶1(神经元)衔接子 |
NOTCH2NL | NM_203458 | 缺刻翅同系物2N-末端样蛋白质 |
NPAL2 | NM_024759 | 含NIPA样结构域2 |
NPAL3 | NM_020448 | 含NIPA样结构域3 |
NPAS2 | NM_002518 | 神经元PAS结构域蛋白质2 |
NPAS3 | NM_022123 | 神经元PAS结构域蛋白质3同种型1 |
NPAT | NM_002519 | 核蛋白质,共济失调-毛细血管扩张症基因座 |
NPC1 | NM_000271 | 尼曼病,类型C1 |
NPEPL1 | NM_024663 | 氨基肽酶样1 |
NPHP1 | NM_000272 | 肾胱素(nephrocytin)同种型1 |
NPHP3 | NM_153240 | 肾消耗病3 |
NPHS1 | NM_004646 | 肾病蛋白(nephrin) |
NPL | NM_030769 | N-乙酰神经氨酸丙酮酸裂合酶 |
NPLOC4 | NM_017921 | 核蛋白质定位4 |
NPNT | NM_001033047 | 肾连蛋白 |
NPTX1 | NM_002522 | 神经元五聚环蛋白I前体 |
NPTXR | NM_014293 | 神经元五聚环蛋白受体同种型1 |
NPY5R | NM_006174 | 神经肽Y受体Y5 |
NR2E1 | NM_003269 | 核受体亚家族2,组E,成员1 |
NR2E3 | NM_014249 | 光受体-特异性核受体同种型 |
NR3C1 | NM_000176 | 核受体亚家族3,组C,成员1 |
NR4A2 | NM_006186 | 核受体亚家族4,组A,成员2 |
NR4A3 | NM_006981 | 核受体亚家族4,组A,成员3 |
NRBF2 | NM_030759 | 核受体结合因子2 |
NRBP1 | NM_013392 | 核受体结合蛋白质 |
NRIP2 | NM_031474 | 核受体相互作用蛋白质2 |
NRP2 | NM_018534 | 神经毡蛋白2同种型4前体 |
NSUN4 | NM_199044 | NOL1/NOP2/Sun结构域家族4蛋白质 |
NT5C2 | NM_012229 | 5′-核苷酸酶,胞质的II |
NT5DC3 | NM_016575 | 假定蛋白LOC51559同种型2 |
NT5E | NM_002526 | 5′外核苷酸酶 |
NTN4 | NM_021229 | neutrin 4 |
NTRK2 | NM_001007097 | 神经营养酪氨酸激酶,受体,类型2 |
NTSR1 | NM_002531 | 神经降压肽受体1 |
NUAK1 | NM_014840 | AMPK相关蛋白激酶5 |
NUBP1 | NM_002484 | 核苷酸结合蛋白1(MinD同系物,E. |
NUBPL | NM_025152 | 核苷酸结合蛋白质样 |
NUDT4 | NM_019094 | nudix-类型模体4同种型α |
NUFIP2 | NM_020772 | 82-kD FMRP相互作用蛋白质 |
NUP160 | NM_015231 | 核孔蛋白160kDa |
NUP35 | NM_001008544 | 核孔蛋白35kDa同种型b |
NUP43 | NM_198887 | 核孔蛋白43kDa |
NUP62 | NM_012346 | 核孔蛋白62kDa |
NUP98 | NM_016320 | 核孔蛋白98kD同种型1 |
NUPL1 | NM_001008564 | 核孔蛋白样1同种型b |
NUSAP1 | NM_016359 | 核仁和纺锤体相关蛋白1 |
NY-SAR-48 | NM_001011699 | 肉瘤抗原NY-SAR-48同种型b |
OACT2 | NM_138799 | O-酰基转移酶(膜结合的)结构域 |
OACT5 | NM_005768 | 基因丰富簇,C3f基因 |
OAS2 | NM_016817 | 2′-5′-寡腺苷酸合成酶2同种型1 |
OATL1 | NM_001006113 | 乌氨酸氨基转移酶样1同种型1 |
OBFC2A | NM_001031716 | 假定蛋白LOC64859 |
OBFC2B | NM_024068 | 假定蛋白LOC79035 |
OCLN | NM_002538 | 闭合蛋白 |
OCRL | NM_000276 | 磷脂酰肌醇多磷酸5-磷酸酶 |
OGDH | NM_001003941 | 酮戊二酸(α-酮戊二酸)脱氢酶 |
OGG1 | NM_016827 | 8-氧鸟嘌呤DNA糖基化酶同种型2c |
OGT | NM_003605 | O连锁的GlcNAc转移酶同种型3 |
OLIG1 | NM_138983 | 少突胶质细胞转录因子1 |
OPA3 | NM_001017989 | OPA3蛋白质同种型a |
OPHN1 | NM_002547 | 寡膈蛋白1 |
OPTN | NM_001008211 | 视神经蛋白 |
OR7D2 | NM_175883 | 假定蛋白LOC162998 |
ORC6L | NM_014321 | 起点识别复合体亚基6 |
ORMDL3 | NM_139280 | ORM1样3 |
OSBPL2 | NM_014835 | 氧固醇结合蛋白质样蛋白质2同种型 |
OSBPL5 | NM_020896 | 氧固醇结合蛋白质样蛋白质5同种型 |
OSCAR | NM_206817 | 破骨细胞-相关受体同种型2 |
OSM | NM_020530 | 制癌蛋白M前体 |
OSR1 | NM_145260 | odd-skipped相关1 |
OSTM1 | NM_014028 | 骨硬化病相关的跨膜蛋白质 |
OTUD4 | NM_199324 | 含OTU结构域4蛋白质同种型1 |
OTUD6A | NM_207320 | HIN-6蛋白酶 |
OTX1 | NM_014562 | 正小齿1 |
OXR1 | NM_181354 | 氧化抗性1 |
P2RX4 | NM_002560 | 嘌呤能受体P2X4同种型a |
P2RX7 | NM_002562 | 嘌呤能受体P2X7同种型a |
P2RY13 | NM_023914 | 嘌呤能受体P2Y,G-蛋白偶联的,13 |
P2RY14 | NM_014879 | 嘌呤能受体P2Y,G-蛋白偶联的,14 |
P2RY6 | NM_004154 | 嘧啶能受体P2Y6 |
P2RY8 | NM_178129 | G-蛋白偶联的嘌呤能受体P2Y8 |
P4HA3 | NM_182904 | 脯氨酰4-羟化酶,αIII亚基 |
PABPC5 | NM_080832 | 聚(A)结合蛋白质,细胞质5 |
PACSIN1 | NM_020804 | 蛋白质激酶C和酪蛋白激酶底物 |
PADI1 | NM_013358 | 肽基精氨酸脱亚胺酶类型I |
PAF1 | NM_019088 | Paf1,RNA聚合酶II相关因子, |
PAFAH1B1 | NM_000430 | 血小板活化因子乙酰水解酶, |
PAFAH1B2 | NM_002572 | 血小板活化因子乙酰水解酶, |
PAFAH2 | NM_000437 | 血小板活化因子乙酰水解酶2 |
PAG1 | NM_018440 | 与鞘糖脂相关的磷蛋白 |
PAICS | NM_006452 | 磷酸核糖氨基咪唑羧化酶 |
PAK2 | NM_002577 | p21-激活的激酶2 |
PALLD | NM_016081 | 钯蛋白 |
PALM2-AKAP2 | NM_007203 | PALM2-AKAP2蛋白质同种型1 |
PAM | NM_000919 | 肽基甘氨酸α-酰胺化单加氧酶 |
PANK1 | NM_138316 | 泛酸激酶1同种型γ |
PANK3 | NM_024594 | 泛酸激酶3 |
PANX1 | NM_015368 | pannexin1 |
PANX2 | NM_052839 | pannexin2 |
PAPD1 | NM_018109 | 含PAP相关的结构域1 |
PAPOLA | NM_032632 | poly(A)聚合酶α |
PAPOLB | NM_020144 | poly(A)聚合酶β(睾丸特异性) |
PAPOLG | NM_022894 | poly(A)聚合酶γ |
PAPPA | NM_002581 | 怀孕相关血浆蛋白质A |
PAQR5 | NM_017705 | 膜孕酮受体γ |
PARD6B | NM_032521 | PAR-6β |
PARD6G | NM_032510 | PAR-6γ蛋白质 |
PARN | NM_002582 | 聚(A)-特异性核糖核酸酶(脱腺苷化 |
PARP14 | NM_017554 | 聚(ADP-核糖)聚合酶家族,成员14 |
PARP6 | NM_020213 | 聚(ADP-核糖)聚合酶家族,成员6 |
PBK | NM_018492 | T-LAK细胞来源蛋白质激酶 |
PBOV1 | NM_021635 | 前列腺和乳癌过表达的1 |
PBX3 | NM_006195 | 前B细胞白血病转录因子3 |
PBXIP1 | NM_020524 | 前B细胞白血病转录因子 |
PCAF | NM_003884 | p300/CBP相关因子 |
PCDH11X | NM_032967 | 原钙黏着蛋白11X-连锁同种型b前体 |
PCDH11Y | NM_032971 | 原钙黏着蛋白11Y连锁的同种型a |
PCDH20 | NM_022843 | 原钙黏着蛋白20 |
PCDHA1 | NM_018900 | 原钙黏着蛋白α1同种型1前体 |
PCDHA10 | NM_018901 | 原钙黏着蛋白α10同种型1前体 |
PCDHA11 | NM_018902 | 原钙黏着蛋白α11同种型1前体 |
PCDHA12 | NM_018903 | 原钙黏着蛋白α12同种型1前体 |
PCDHA13 | NM_018904 | 原钙黏着蛋白α13同种型1前体 |
PCDHA2 | NM_018905 | 原钙黏着蛋白α2同种型1前体 |
PCDHA3 | NM_018906 | 原钙黏着蛋白α3同种型1前体 |
PCDHA4 | NM_018907 | 原钙黏着蛋白α4同种型1前体 |
PCDHA5 | NM_018908 | 原钙黏着蛋白α5同种型1前体 |
PCDHA6 | NM_018909 | 原钙黏着蛋白α6同种型1前体 |
PCDHA7 | NM_018910 | 原钙黏着蛋白α7同种型1前体 |
PCDHA8 | NM_018911 | 原钙黏着蛋白α8同种型1前体 |
PCDHA9 | NM_031857 | 原钙黏着蛋白α9同种型1前体 |
PCDHAC1 | NM_018898 | 原钙黏着蛋白α亚家族C,1同种型1 |
PCDHAC2 | NM_018899 | 原钙黏着蛋白α亚家族C,2同种型1 |
PCDHB9 | NM_019119 | 原钙黏着蛋白β9前体 |
PCDHGA7 | NM_032087 | 原钙黏着蛋白γ亚家族A,7同种型2 |
PCGF6 | NM_001011663 | polycomb组环指6同种型a |
PCK1 | NM_002591 | 胞质的磷酸烯醇丙酮酸羧基激酶1 |
PCMTD1 | NM_052937 | 假定蛋白LOC115294 |
PCNP | NM_020357 | 含PEST核蛋白质 |
PCNX | NM_014982 | 山核桃素同系物 |
PCNXL2 | NM_014801 | 山核桃素样2 |
PCSK2 | NM_002594 | 蛋白原转变酶枯草蛋白酶/kexin类型2 |
PCSK6 | NM_138323 | 成对碱性氨基酸断裂系统4 |
PCYOX1 | NM_016297 | 异戊二烯基半胱氨酸氧化酶1 |
PCYT1B | NM_004845 | 磷酸胞苷酰转移酶1,胆碱,β |
PDAP1 | NM_014891 | PDGFA相关蛋白1 |
PDCD1LG2 | NM_025239 | 程序性细胞死亡1配体2 |
PDCD4 | NM_014456 | 程序性细胞死亡4同种型1 |
PDCD7 | NM_005707 | 程序性细胞死亡7 |
PDDC1 | NM_182612 | 假定蛋白LOC347862 |
PDE1B | NM_000924 | 磷酸二酯酶1B,钙调蛋白依赖的 |
PDE3B | NM_000922 | 磷酸二酯酶3B,cGMP-抑制的 |
PDE4A | NM_006202 | 磷酸二酯酶4A,cAMP-特异性 |
PDE4B | NM_002600 | 磷酸二酯酶4B,cAMP-特异性同种型1 |
PDE4C | NM_000923 | 磷酸二酯酶4C,cAMP-特异性 |
PDE4DIP | NM_001002811 | 磷酸二酯酶4D相互作用蛋白质同种型 |
PDE5A | NM_001083 | 磷酸二酯酶5A同种型1 |
PDE7A | NM_002604 | 磷酸二酯酶7A同种型b |
PDE7B | NM_018945 | 磷酸二酯酶7B |
PDE8A | NM_002605 | 磷酸二酯酶8A同种型1 |
PDGFB | NM_002608 | 血小板衍生生长因子β同种型1, |
PDGFC | NM_016205 | 血小板衍生生长因子C前体 |
PDGFD | NM_025208 | 血小板衍生生长因子D同种型1 |
PDGFRA | NM_006206 | 血小板衍生生长因子受体α |
PDGFRB | NM_002609 | 血小板衍生生长因子受体β |
PDHX | NM_003477 | 丙酮酸脱氢酶复合体,组分X |
PDIK1L | NM_152835 | PDLIM1相互作用激酶1样 |
PDK1 | NM_002610 | 丙酮酸脱氢酶激酶,同工酶1 |
PDK4 | NM_002612 | 丙酮酸脱氢酶激酶,同工酶4 |
PDLIM4 | NM_003687 | PDZ和L1M结构域4 |
PDLIM5 | NM_001011513 | PDZ和LIM结构域5同种型b |
PDPK1 | NM_002613 | 3-磷酸肌醇依赖性蛋白质激酶-1 |
PDPN | NM_001006624 | 肺I型细胞膜-相关 |
PDPR | NM_017990 | 丙酮酸脱氢酶磷酸酶调节 |
PDRG1 | NM_030815 | p53和DNA损伤调节的蛋白质 |
PDZD11 | NM_016484 | 含PDZ结构域11 |
PECR | NM_018441 | 过氧化物酶体反-2-烯酰辅酶A还原酶 |
PEG3 | NM_006210 | 父本表达的3 |
PELI2 | NM_021255 | pellino 2 |
PELO | NM_015946 | pelota同系物 |
PER2 | NM_022817 | period 2同种型1 |
PERP | NM_022121 | PERP,TP53细胞凋亡效应蛋白 |
PERQ1 | NM_022574 | PERQ氨基酸丰富,具GYF结构域1 |
PEX16 | NM_057174 | 过氧化物酶体生物发生因子16同种型2 |
PEX19 | NM_002857 | 过氧化物酶体生物发生因子19 |
PEX26 | NM_017929 | 过氧化物酶体生物发生因子26 |
PEX5L | NM_016559 | PXR2b蛋白质 |
PF4V1 | NM_002620 | 血小板因子4变体1 |
PFKFB2 | NM_006212 | 6-磷酸果糖-2-激酶/果糖-2, |
PFKFB3 | NM_004566 | 6-磷酸果糖-2-激酶/果糖-2, |
PFKP | NM_002627 | 磷酸果糖激酶,血小板 |
PFN2 | NM_002628 | 肌动蛋白抑制蛋白2同种型b |
PGA5 | NM_014224 | 胃蛋白酶原5,组I(胃蛋白酶原A) |
PGAP1 | NM_024989 | GPI脱酰酶 |
PGBD4 | NM_152595 | piggyBac可转座元件衍生4 |
PGBD5 | NM_024554 | piggyBac可转座元件衍生5 |
PGDS | NM_014485 | 前列腺素-D合酶 |
PGF | NM_002632 | 胎盘生长因子,血管内皮 |
PGM2L1 | NM_173582 | 葡萄糖磷酸变位酶2样1 |
PGM5 | NM_021965 | 葡萄糖磷酸变位酶5 |
PHACTR4 | NM_023923 | 磷酸酶和肌动蛋白调节物4 |
PHF1 | NM_002636 | PHD指蛋白质1同种型a |
PHF11 | NM_016119 | PHD指蛋白质11 |
PHF15 | NM_015288 | PHD指蛋白质15 |
PHF17 | NM_024900 | Jade1蛋白质短同种型 |
PHF2 | NM_005392 | PHD指蛋白质2同种型a |
PHF20 | NM_016436 | PHD指蛋白质20 |
PHF23 | NM_024297 | PHD指蛋白质23 |
PHF6 | NM_001015877 | PHD指蛋白质6同种型1 |
PHF8 | NM_015107 | PHD指蛋白质8 |
PHKG1 | NM_006213 | 磷酸化酶激酶,γ1(肌肉) |
PHLDB3 | NM_198850 | 血小板白细胞C激酶底物同系物样结构域,家族B, |
PHLPPL | NM_015020 | PH结构域和亮氨酸丰富重复蛋白质 |
PHTF2 | NM_020432 | 假定的同源异型域转录因子2 |
PHYHIP | NM_014759 | 植烷酰辅酶A羟化酶相互作用蛋白质 |
PI15 | NM_015886 | 蛋白酶抑制剂15前蛋白原 |
PIGK | NM_005482 | 磷脂酰肌醇聚糖,类K前体 |
PIGM | NM_145167 | PIG-M甘露糖基转移酶 |
PIGO | NM_032634 | 磷脂酰肌醇聚糖,类O同种型1 |
PIGX | NM_017861 | GPI-甘露糖基转移酶亚基 |
PIK3CD | NM_005026 | 磷酸肌醇-3-激酶,催化,δ |
PIK3R1 | NM_181504 | 磷酸肌醇-3-激酶,调节亚基, |
PIK3R2 | NM_005027 | 磷酸肌醇-3-激酶,调节亚基2 |
PIP3-E | NM_015553 | 磷酸肌醇-结合蛋白PIP3-E |
PIP5K1B | NM_001031687 | 磷脂酰肌醇-4-磷酸5-激酶,类型 |
PIP5K2C | NM_024779 | 磷脂酰肌醇-4-磷酸5-激酶,类型 |
PIP5K3 | NM_001002881 | 磷脂酰肌醇-3- |
PIPOX | NM_016518 | L-六氢吡啶羧酸氧化酶 |
PITPNA | NM_006224 | 磷脂酰肌醇转运蛋白质,α |
PITX1 | NM_002653 | 成对同源异型结构域转录因子1 |
PIWIL2 | NM_018068 | piwi样2 |
PKD1 | NM_000296 | 多囊蛋白1同种型2前体 |
PKD2 | NM_000297 | 多囊蛋白2 |
PKDREJ | NM_006071 | 卵胶样蛋白质前体受体 |
PKHD1 | NM_138694 | polyductin同种型1 |
PKIA | NM_006823 | cAMP依赖的蛋白质激酶抑制剂α |
PKIG | NM_007066 | cAMP依赖的蛋白质激酶抑制剂γ |
PKMYT1 | NM_004203 | 蛋白质激酶Myt1同种型1 |
PKNOX1 | NM_004571 | PBX/有节1同源框1同种型1 |
PKP1 | NM_000299 | 亲斑蛋白1同种型1b |
PLA2G6 | NM_001004426 | 磷脂酶A2,组VI同种型b |
PLAC1 | NM_021796 | 胎盘-特异性1 |
PLAC2 | NM_153375 | 胎盘-特异性2 |
PLAC4 | NM_182832 | 胎盘-特异性4 |
PLAG1 | NM_002655 | 多形性腺瘤基因1 |
PLAGL2 | NM_002657 | 多形性腺瘤基因样2 |
PLAU | NM_002658 | 尿激酶纤维蛋白溶酶原激活物前蛋白原 |
PLAUR | NM_001005376 | 纤维蛋白溶酶原激活物,尿激酶受体 |
PLB1 | NM_153021 | 磷脂酶B1 |
PLCB1 | NM_015192 | 磷酸肌醇-特异性磷脂酶Cβ1 |
PLCH1 | NM_014996 | 磷脂酶C样3 |
PLCXD3 | NM_001005473 | 磷脂酰肌醇-特异性磷脂酶C,X |
PLD1 | NM_002662 | 磷脂酶D1,磷脂酰胆碱-特异性 |
PLDN | NM_012388 | 梅毒螺旋体素 |
PLEKHA1 | NM_001001974 | 含血小板白细胞C激酶底物同源物结构域,家族A |
PLEKHA3 | NM_019091 | 含血小板白细胞C激酶底物同源物结构域,家族A |
PLEKHA6 | NM_014935 | 磷酸肌醇3-磷酸结合蛋白质-3 |
PLEKHB2 | NM_017958 | 含血小板白细胞C激酶底物同源物结构域,家族B |
PLEKHF2 | NM_024613 | phafin 2 |
PLEKHG1 | NM_001029884 | 含血小板白细胞C激酶底物同源物结构域,家族G |
PLEKHG6 | NM_018173 | 含血小板白细胞C激酶底物同源物结构域,家族G |
PLEKHM1 | NM_014798 | 含血小板白细胞C激酶底物同源物结构域,家族M |
PLEKHQ1 | NM_025201 | 含PH结构域蛋白质 |
PLIN | NM_002666 | 围脂滴蛋白 |
PLS1 | NM_002670 | 丝束蛋白1 |
PLSCR3 | NM_020360 | 磷脂爬行酶3 |
PLSCR4 | NM_020353 | 磷脂爬行酶4 |
PLXDC1 | NM_020405 | 含丛蛋白结构域1前体 |
PLXNA1 | NM_032242 | 丛蛋白A1 |
PLXNA4B | NM_181775 | 假定蛋白LOC91584 |
PLXNC1 | NM_005761 | 丛蛋白C1 |
PMAIP1 | NM_021127 | 佛波醇12肉豆蔻酸13醋酸酯-诱导的蛋白质 |
PNKD | NM_015488 | 肌原纤维形成调节物1同种型1 |
PNPLA1 | NM_173676 | 含马铃薯块茎特异蛋白样磷脂酶结构域1 |
PNPLA4 | NM_004650 | GS2基因 |
PODN | NM_153703 | Podocan |
POFUT1 | NM_015352 | 蛋白质O-岩藻糖基转移酶1同种型1 |
POLDIP2 | NM_015584 | DNA聚合酶δ相互作用蛋白质2 |
POLH | NM_006502 | 聚合酶(DNA指导的),eta |
POLQ | NM_199420 | DNA聚合酶θ |
POLR1E | NM_022490 | RNA聚合酶I相关因子53 |
POLR3A | NM_007055 | 聚合酶(RNA)III(DNA指导的)多肽 |
POLR3K | NM_016310 | DNA指导的RNA聚合酶III多肽K |
PON2 | NM_000305 | 对氧磷酶2同种型1 |
POU3F2 | NM_005604 | POU结构域,类3,转录因子2 |
POU4F2 | NM_004575 | POU结构域,类4,转录因子2 |
POU6F1 | NM_002702 | POU结构域,类6,转录因子1 |
PPAPDC3 | NM_032728 | 磷脂酸磷酸酶类型2结构域 |
PPARA | NM_001001928 | 过氧化物酶增殖激活受体, |
PPARD | NM_006238 | 过氧化物酶增殖激活受体, |
PPGB | NM_000308 | β-半乳糖苷酶保护蛋白 |
PPM1A | NM_177951 | 蛋白质磷酸酶1A同种型2 |
PPM1B | NM_001033556 | 蛋白质磷酸酶1B同种型4 |
PPM1E | NM_014906 | 蛋白质磷酸酶1E |
PPM1K | NM_152542 | 蛋白质磷酸酶1K(含PP2C结构域) |
PPP1R12B | NM_002481 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP1R13B | NM_015316 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP1R14C | NM_030949 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP1R15B | NM_032833 | 蛋白质磷酸酶1,调节亚基15B |
PPP1R1A | NM_006741 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP1R3B | NM_024607 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP1R3C | NM_005398 | 蛋白质磷酸酶1,调节性(抑制剂) |
PPP2CA | NM_002715 | 蛋白质磷酸酶2,催化亚基,α |
PPP2R1B | NM_002716 | 调节亚基A的β同种型,蛋白质 |
PPP2R2A | NM_002717 | 调节亚基B55的α同种型,蛋白质 |
PPP2R3A | NM_002718 | 蛋白质磷酸酶2,调节亚基B″, |
PPP3CA | NM_000944 | 蛋白质磷酸酶3(以前称作2B),催化 |
PPP3R1 | NM_000945 | 蛋白质磷酸酶3,调节亚基B, |
PPP6C | NM_002721 | 蛋白质磷酸酶6,催化亚基 |
PPTC7 | NM_139283 | T细胞活化蛋白质磷酸酶2C |
PQLC2 | NM_017765 | 含PQ环重复2 |
PRAP1 | NM_145202 | 脯氨酸丰富酸性蛋白质1 |
PRDM10 | NM_020228 | 含PR结构域10同种型1 |
PRDM12 | NM_021619 | 含PR结构域12 |
PRDM14 | NM_024504 | 含PR结构域14 |
PRDM2 | NM_001007257 | 成视网膜细胞瘤蛋白质结合锌指 |
PRELP | NM_002725 | 脯氨酸精氨酸丰富末端亮氨酸丰富重复 |
PREPL | NM_006036 | 脯氨酰内肽酶样 |
PREX1 | NM_020820 | PREX1蛋白质 |
PRH2 | NM_005042 | 脯氨酸丰富蛋白质HaeIII亚家族2 |
PRIC285 | NM_033405 | PPAR-α相互作用复合体蛋白质285 |
PRICKLE2 | NM_198859 | 棘样2 |
PRKAB2 | NM_005399 | AMP活化的蛋白质激酶β2 |
PRKACB | NM_002731 | cAMP依赖的蛋白质激酶催化亚基 |
PRKAR1A | NM_002734 | cAMP依赖的蛋白质激酶,调节 |
PRKCH | NM_006255 | 蛋白质激酶C,eta |
PRKD3 | NM_005813 | 蛋白质激酶D3 |
PRKX | NM_005044 | 蛋白质激酶,X-连锁 |
PRKY | NM_002760 | 蛋白质激酶,Y连锁的 |
PRND | NM_012409 | 朊病毒样蛋白质叠朊蛋白前蛋白原 |
PRNP | NM_000311 | 朊病毒蛋白质前蛋白原 |
PRO0149 | NM_014117 | 假定蛋白LOC29035 |
PRO1853 | NM_018607 | 假定蛋白LOC55471同种型2 |
PROK1 | NM_032414 | 激动素原1 |
PROSC | NM_007198 | 脯氨酸合成酶共转录同系物 |
PRPF4 | NM_004697 | PRP4前mRNA加工因子4同系物 |
PRPF40B | NM_001031698 | 亨廷顿蛋白相互作用蛋白质C同种型1 |
PRPF4B | NM_003913 | 丝氨酸/苏氨酸-蛋白质激酶PRP4K |
PRR11 | NM_018304 | 假定蛋白LOC55771 |
PRR5 | NM_001017528 | 脯氨酸丰富5(′肾)同种型2 |
PRRG1 | NM_000950 | 脯氨酸丰富Gla(G-羧基谷氨酸)1 |
PRRG4 | NM_024081 | 脯氨酸丰富Gla(G-羧基谷氨酸)4 |
PRRT3 | NM_207351 | 假定蛋白LOC285368 |
PRRX1 | NM_006902 | 成对中胚层同源框1同种型pmx-1a |
PRSS35 | NM_153362 | 蛋白酶,丝氨酸,35 |
PSCD1 | NM_004762 | 血小板白细胞C激酶底物同源物,Sec7和卷曲螺旋 |
PSD | NM_002779 | 含血小板白细胞C激酶底物和Sec7结构域 |
PSD3 | NM_015310 | ADP-核糖基化因子乌嘌呤核苷酸 |
PSG3 | NM_021016 | 怀孕特异性β-1-糖蛋白3 |
PSMC3IP | NM_016556 | TBP-1相互作用蛋白质同种型2 |
PSMD12 | NM_002816 | 蛋白酶体26S非ATP酶亚基12同种型1 |
PSMD5 | NM_005047 | 蛋白酶体26S非ATP酶亚基5 |
PSTPIP2 | NM_024430 | 脯氨酸-丝氨酸-苏氨酸磷酸酶相互作用 |
PTAFR | NM_000952 | 血小板活化因子受体 |
PTDSS1 | NM_014754 | 磷脂酰丝氨酸合酶1 |
PTGDR | NM_000953 | 前列腺素D2受体 |
PTGER3 | NM_198718 | 前列腺素E受体3,亚类型EP3同种型 |
PTGER4 | NM_000958 | 前列腺素E受体4,亚类型EP4 |
PTGFRN | NM_020440 | 前列腺素F2受体负调节物 |
PTGIS | NM_000961 | 前列腺素I2(前列环素)合酶 |
PTGS1 | NM_000962 | 前列腺素-内过氧化物合酶1同种型1 |
PTHLH | NM_198965 | 甲状旁腺激素样激素同种型1 |
PTK2 | NM_005607 | PTK2蛋白质酪氨酸激酶2同种型b |
PTK6 | NM_005975 | PTK6蛋白质酪氨酸激酶6 |
PTK9 | NM_002822 | 双丝蛋白同种型1 |
PTP4A1 | NM_003463 | 蛋白质酪氨酸磷酸酶类型IVA,成员1 |
PTPDC1 | NM_152422 | 含蛋白质酪氨酸磷酸酶结构域1 |
PTPN1 | NM_002827 | 蛋白质酪氨酸磷酸酶,非受体型 |
PTPN12 | NM_002835 | 蛋白质酪氨酸磷酸酶,非受体型 |
PTPN3 | NM_002829 | 蛋白质酪氨酸磷酸酶,非受体型 |
PTPN4 | NM_002830 | 蛋白质酪氨酸磷酸酶,非受体型 |
PTPNS1 | NM_080792 | 蛋白质酪氨酸磷酸酶,非受体型 |
PTPRO | NM_002848 | 受体-类型蛋白质酪氨酸磷酸酶O |
PTPRT | NM_007050 | 蛋白质酪氨酸磷酸酶,受体型,T |
PTRF | NM_012232 | 聚合酶I和转录物释放因子 |
PURA | NM_005859 | 嘌呤丰富元件结合蛋白A |
PURB | NM_033224 | 嘌呤丰富元件结合蛋白B |
PVR | NM_006505 | 脊髓灰质炎病毒受体 |
PVRL2 | NM_002856 | 脊髓灰质炎病毒受体相关2(泡疹病毒进入 |
PYGB | NM_002862 | 脑糖原磷酸化酶 |
QKI | NM_206853 | quaking同系物,KH结构域RNA结合同种型 |
QPRT | NM_014298 | 喹啉酸磷酸核糖转移酶 |
QRSL1 | NM_018292 | 谷氨酰胺酰-tRNA合酶 |
R7BP | NM_001029875 | R7结合蛋白质 |
RAB10 | NM_016131 | ras相关GTP-结合蛋白RAB10 |
RAB11A | NM_004663 | Ras相关蛋白Rab-11A |
RAB11FIP1 | NM_001002233 | Rab偶联蛋白质同种型2 |
RAB11FIP4 | NM_032932 | RAB11家族相互作用蛋白质4(I类I) |
RAB11FIP5 | NM_015470 | RAB11家族相互作用蛋白质5(I类) |
RAB21 | NM_014999 | RAB21,成员RAS癌基因家族 |
RAB22A | NM_020673 | RAS相关蛋白RAB-22A |
RAB23 | NM_016277 | Ras相关蛋白Rab-23 |
RAB27A | NM_004580 | Ras相关蛋白Rab-27A |
RAB28 | NM_001017979 | RAB28,成员RAS癌基因家族同种型1 |
RAB30 | NM_014488 | RAB30,成员RAS癌基因家族 |
RAB31 | NM_006868 | RAB31,成员RAS癌基因家族 |
RAB35 | NM_006861 | RAB35,成员RAS癌基因家族 |
RAB37 | NM_001006638 | RAB37,成员RAS癌基因家族同种型2 |
RAB3B | NM_002867 | RAB3B,成员RAS癌基因家族 |
RAB3IL1 | NM_013401 | RAB3A相互作用蛋白质(Rab结合蛋白3)样1 |
RAB43 | NM_198490 | RAB43蛋白质 |
RAB5B | NM_002868 | RAB5B,成员RAS癌基因家族 |
RAB7L1 | NM_003929 | RAB7,成员RAS癌基因家族样1 |
RAB8B | NM_016530 | RAB8B,成员RAS癌基因家族 |
RABEP1 | NM_004703 | Rab接触蛋白,RAB GTP酶结合效应蛋白蛋白质1 |
RABGAP1 | NM_012197 | RAB GTP酶激活素1 |
RABL2A | NM_013412 | RAB,RAS癌基因家族成员样2A |
RABL2B | NM_001003789 | RAB,RAS癌基因家族成员样2B |
RABL5 | NM_022777 | RAB,成员RAS癌基因家族样5 |
RACGAP1 | NM_013277 | Rac GTP酶激活素1 |
RAD1 | NM_002853 | RAD1同系物同种型1 |
RAD17 | NM_002873 | RAD17同系物同种型1 |
RAD18 | NM_020165 | 复制后修复蛋白质hRAD18p |
RAD23B | NM_002874 | UV切除修复蛋白质RAD23同系物B |
RAD51 | NM_002875 | RAD51同源蛋白同种型1 |
RAD52 | NM_002879 | RAD52同系物同种型α |
RAG1AP1 | NM_018845 | 基质细胞蛋白质 |
RAI16 | NM_022749 | 视黄酸诱导的16 |
RAI17 | NM_020338 | 视黄酸诱导的17 |
RALBP1 | NM_006788 | ralA结合蛋白1 |
RALGPS1 | NM_014636 | 含PH结构域和SH3结合模体Ral GEF 1 |
RALGPS2 | NM_018037 | 含PH结构域和SH3结合模体Ral GEF 2 |
RAN | NM_006325 | ras相关核蛋白质 |
RANBP5 | NM_002271 | RAN结合蛋白5 |
RAP1A | NM_001010935 | RAP1A,RAS癌基因家族成员 |
RAP2B | NM_002886 | RAP2B,RAS癌基因家族成员 |
RAP2C | NM_021183 | RAP2C,RAS癌基因家族成员 |
RAPGEF1 | NM_005312 | 乌嘌呤核苷酸释放因子2同种型a |
RAPGEF4 | NM_007023 | Rap乌苷酸交换因子(GEF)4 |
RAPGEFL1 | NM_016339 | Rap乌嘌呤核苷酸交换因子 |
RAPH1 | NM_213589 | Ras相关和血小板白细胞C激酶底物同源物结构域 |
Raptor | NM_020761 | Raptor |
RARB | NM_000965 | 视黄酸受体,β同种型1 |
RASD1 | NM_016084 | RAS,地塞米松-诱导的1 |
RASGEF1A | NM_145313 | RasGEF结构域家族,成员1A |
RASL11B | NM_023940 | RAS样家族11成员B |
RASL12 | NM_016563 | RAS样,家族12蛋白质 |
RASSF2 | NM_014737 | Ras关联结构域家族2 |
RASSF6 | NM_177532 | Ras关联(RalGDS/AF-6)结构域家族6 |
RASSF8 | NM_007211 | Ras关联(RalGDS/AF-6)结构域家族8 |
RAVER2 | NM_018211 | 核糖核蛋白,PTB结合2 |
RB1 | NM_000321 | 成视网膜细胞瘤1 |
RB1CC1 | NM_014781 | Rb1-可诱导的卷曲螺旋蛋白质1 |
RBBP5 | NM_005057 | 成视网膜细胞瘤结合蛋白5 |
RBBP7 | NM_002893 | 成视网膜细胞瘤结合蛋白7 |
RBJ | NM_016544 | Ras相关蛋白Rap1 |
RBL1 | NM_002895 | 成视网膜细胞瘤样蛋白质1同种型a |
RBL2 | NM_005611 | 成视网膜细胞瘤样2(p130) |
RBM12 | NM_006047 | RNA结合模体蛋白质12 |
RBM12B | NM_203390 | 假定蛋白LOC389677 |
RBM13 | NM_032509 | RNA结合模体蛋白质13 |
RBM15B | NM_013286 | RNA结合模体蛋白质15B |
RBM7 | NM_016090 | RNA结合模体蛋白质7 |
RBPMS | NM_006867 | 具有多种剪接形式的RNA-结合蛋白 |
RCCD1 | NM_001017919 | 假定蛋白LOC91433 |
RCOR2 | NM_173587 | REST辅阻遏物2 |
RECQL5 | NM_001003715 | RecQ蛋白质样5同种型2 |
REEP1 | NM_022912 | 受体表达增强蛋白质1 |
REEP3 | NM_001001330 | 受体表达增强蛋白质3 |
REEP5 | NM_005669 | 受体辅助蛋白5 |
REL | NM_002908 | v-rel网状内皮组织增殖病毒癌基因 |
RERE | NM_012102 | 萎缩蛋白-1样蛋白质 |
RET | NM_020975 | ret原癌基因同种型a |
REXO1L1 | NM_172239 | 外切核酸酶GOR |
RFC2 | NM_002914 | 复制因子C2(40kD)同种型2 |
RFK | NM_018339 | 核黄素激酶 |
RFX2 | NM_000635 | 调节因子X2同种型a |
RFX5 | NM_000449 | 调节因子X,5 |
RFXAP | NM_000538 | 调节因子X相关蛋白 |
RG9MTD3 | NM_144964 | RNA(鸟嘌呤-9-)甲基转移酶结构域 |
RGL1 | NM_015149 | ral乌嘌呤核苷酸解离 |
RGMA | NM_020211 | RGM结构域家族,成员A |
RGMB | NM_001012761 | RGM结构域家族,成员B同种型1前体 |
RGPD5 | NM_005054 | 含RANBP2样和GRIP结构域5同种型 |
RGS3 | NM_021106 | G-蛋白质信号转导调节物3同种型2 |
RGS4 | NM_005613 | G-蛋白信号的调节物4 |
RGS5 | NM_003617 | G-蛋白质信号转导调节物5 |
RGS9BP | NM_207391 | RGS9锚定蛋白质 |
RHBDL2 | NM_017821 | 菱形相关蛋白2 |
RHO | NM_000539 | 视紫红质 |
RHOA | NM_001664 | ras同系物基因家族,成员A |
RHOBTB1 | NM_001032380 | 含Rho相关BTB结构域1 |
RHOBTB3 | NM_014899 | 含rho相关BTB结构域3 |
RHOC | NM_175744 | ras同系物基因家族,成员C |
RHOT1 | NM_001033566 | ras同系物基因家族,成员T1同种型2 |
RHOV | NM_133639 | ras同系物基因家族,成员V |
RIC3 | NM_024557 | 胆碱酯酶抑制剂抗性3 |
RIMBP2 | NM_015347 | RIM-结合蛋白2 |
RIMS4 | NM_182970 | 调节突触膜胞吐4 |
RIOK3 | NM_003831 | bimD6同系物的sudD抑制蛋白同种型1 |
RIPK5 | NM_015375 | 受体相互作用蛋白质激酶5同种型1 |
RKHD1 | NM_203304 | 含环指和KH结构域1 |
RKHD2 | NM_016626 | 含环指和KH结构域2 |
RNASEL | NM_021133 | 核糖核酸酶L |
RND3 | NM_005168 | ras同系物基因家族,成员E |
RNF11 | NM_014372 | 环指蛋白11 |
RNF12 | NM_016120 | 环指蛋白12 |
RNF125 | NM_017831 | 环指蛋白125 |
RNF128 | NM_024539 | 环指蛋白128同种型2 |
RNF141 | NM_016422 | 环指蛋白141 |
RNF144 | NM_014746 | 环指蛋白144 |
RNF149 | NM_173647 | 环指蛋白149 |
RNF157 | NM_052916 | 环指蛋白157 |
RNF170 | NM_030954 | 环指蛋白170 |
RNF180 | NM_178532 | 环指蛋白180 |
RNF19 | NM_015435 | 环指蛋白19 |
RNF2 | NM_007212 | 环指蛋白2 |
RNF24 | NM_007219 | 环指蛋白24 |
RNF31 | NM_017999 | 环指蛋白31 |
RNF38 | NM_022781 | 环指蛋白38同种型1 |
RNF4 | NM_002938 | 环指蛋白4 |
RNF6 | NM_005977 | 环指蛋白6同种型1 |
RNF8 | NM_003958 | 环指蛋白8同种型1 |
RNH1 | NM_002939 | 核糖核酸酶/血管生成素抑制剂 |
RNMT | NM_003799 | RNA(乌嘌呤-7-)甲基转移酶 |
RNMTL1 | NM_018146 | RNA甲基转移酶样1 |
RNPC1 | NM_183425 | 含RNA结合区蛋白质1同种型 |
RNPS1 | NM_006711 | RNA-结合蛋白S1,丝氨酸丰富结构域 |
RNUXA | NM_032177 | RNA U,小的核RNA输出衔接子 |
ROCK2 | NM_004850 | Rho-相关,含卷曲螺旋蛋白质 |
RORA | NM_002943 | RAR相关孤儿受体A同种型c |
RORC | NM_001001523 | RAR相关孤儿受体C同种型b |
RPA2 | NM_002946 | 复制蛋白质A2,32kDa |
RPIP8 | NM_006695 | RaP2相互作用蛋白质8 |
RPL13 | NM_000977 | 核糖体蛋白质L13 |
RPL15 | NM_002948 | 核糖体蛋白质L15 |
RPL32 | NM_000994 | 核糖体蛋白质L32 |
RPL37 | NM_000997 | 核糖体蛋白质L37 |
RPL37A | NM_000998 | 核糖体蛋白质L37a |
RPL7L1 | NM_198486 | 核糖体蛋白质L7样1 |
RPN1 | NM_002950 | 核糖体结合糖蛋白I前体 |
RPP14 | NM_007042 | 核糖核酸酶P 14kDa亚基 |
RPRM | NM_019845 | reprimo,TP53依赖性G2阻滞调节物 |
RPS23 | NM_001025 | 核糖体蛋白质S23 |
RPS6KA1 | NM_001006665 | 核糖体蛋白质S6激酶,90kDa,多肽 |
RPS6KA2 | NM_001006932 | 核糖体蛋白质S6激酶,90kDa,多肽 |
RPS6KA3 | NM_004586 | 核糖体蛋白质S6激酶,90kDa,多肽 |
RPS6KA4 | NM_001006944 | 核糖体蛋白质S6激酶,90kDa,多肽 |
RPS6KA5 | NM_004755 | 核糖体蛋白质S6激酶,90kDa,多肽 |
RRH | NM_006583 | 周视蛋白(peropsin) |
RRM2 | NM_001034 | 核糖核苷酸还原酶M2多肽 |
RRN3 | NM_018427 | RRN3RNA聚合酶I转录因子 |
RSAD2 | NM_080657 | 含根本的S-腺苷甲硫氨酸结构域 |
RSBN1 | NM_018364 | 圆形精子碱性蛋白质1 |
RSL1D1 | NM_015659 | 含核糖体L1结构域1 |
RSNL2 | NM_024692 | 列斯蛋白样2 |
RSPO2 | NM_178565 | R-脊椎蛋白家族,成员2 |
RSPO4 | NM_001029871 | R-脊椎蛋白家族,成员4同种型1前体 |
RSU1 | NM_012425 | ras阻抑制因子蛋白质1同种型1 |
RTF1 | NM_015138 | Paf1/RNA聚合酶II复合体成分 |
RTN2 | NM_206902 | 浆膜蛋白2同种型D |
RTP1 | NM_153708 | 受体转运蛋白质1 |
RTP4 | NM_022147 | 28kD干扰素应答蛋白质 |
RUNDC1 | NM_173079 | 含RUN结构域1 |
RUNDC2A | NM_032167 | 含RUN结构域2A |
RUNX1 | NM_001001890 | runt相关转录因子1同种型b |
RUNX2 | NM_001015051 | runt相关转录因子2同种型b |
RUNX3 | NM_001031680 | runt相关转录因子3同种型1 |
RXRG | NM_006917 | 类视黄醇X受体,γ同种型a |
S100A16 | NM_080388 | S100钙结合蛋白A16 |
S100A4 | NM_002961 | S100钙-结合蛋白A4 |
S100PBP | NM_001017406 | S100P结合蛋白Riken同种型b |
SACS | NM_014363 | Sacsin |
SAMD10 | NM_080621 | 含不育α模体结构域10 |
SAMD12 | NM_207506 | 含不育α模体结构域12 |
SAMD8 | NM_144660 | 含不育α模体结构域8 |
SAMD9L | NM_152703 | 含不育α模体结构域9样 |
SAPS1 | NM_014931 | 假定蛋白LOC22870 |
SAPS2 | NM_014678 | 假定蛋白LOC9701 |
SAPS3 | NM_018312 | SAPS结构域家族,成员3 |
SAR1B | NM_001033503 | SAR1a基因同系物2 |
SART1 | NM_005146 | T细胞识别的鳞状细胞癌抗原 |
SASH1 | NM_015278 | 含SAM和SH3结构域1 |
SATB2 | NM_015265 | SATB家族成员2 |
SATL1 | NM_001012980 | 精脒/精胺N1-乙酰基转移酶样 |
SBK1 | NM_001024401 | SH3结合结构域激酶1 |
SC4MOL | NM_001017369 | 固醇-C4-甲基氧化酶样同种型2 |
SCAMP1 | NM_052822 | 分泌的运载体膜蛋白质1同种型2 |
SCAMP2 | NM_005697 | 分泌的运载体膜蛋白质2 |
SCAMP5 | NM_138967 | 分泌的运载体膜蛋白质5 |
SCAND2 | NM_022050 | 含SCAN结构域蛋白质2同种型1 |
SCARA5 | NM_173833 | 假定蛋白LOC286133 |
SCC-112 | NM_015200 | SCC-112蛋白质 |
SCCPDH | NM_016002 | 酵母氨酸脱氢酶(假定的) |
SCIN | NM_033128 | 肌切蛋白 |
SCMH1 | NM_001031694 | 中足性梳同系物1同种型1 |
SCML2 | NM_006089 | 中足性梳样2 |
SCN11A | NM_014139 | 钠通道,电压门控,类型XI,α |
SCN2B | NM_004588 | 钠通道,电压门控,类型II,β |
SCN3A | NM_006922 | 钠通道,电压门控,类型III,α |
SCRN3 | NM_024583 | 分离蛋白3 |
SCRT2 | NM_033129 | scratch 2蛋白质 |
SDC2 | NM_002998 | 黏结蛋白聚糖2前体 |
SDPR | NM_004657 | 血清除尽效应蛋白 |
SEC14L2 | NM_012429 | SEC14样2 |
SEC31L2 | NM_198138 | 酿酒酵母(S.cerevisiae)SEC31样2同种型b |
SEL1L | NM_005065 | lin-12样sel-1抑制蛋白 |
SELE | NM_000450 | 选择蛋白E前体 |
SELI | NM_033505 | 硒蛋白I |
SELPLG | NM_003006 | 选择蛋白P配体 |
SEMA3E | NM_012431 | 脑信号蛋白3E |
SEMA4B | NM_020210 | 脑信号蛋白4B前体 |
SEMA4G | NM_017893 | 脑信号蛋白4G |
SEMA5A | NM_003966 | 脑信号蛋白5A |
SENP1 | NM_014554 | sentrin/SUMO-特异性蛋白酶1 |
SENP8 | NM_145204 | SUMO/sentrin特异性蛋白酶家族成员8 |
SEPT11 | NM_018243 | 隔蛋白11 |
SEPT2 | NM_001008491 | 隔蛋白2 |
SEPT6 | NM_015129 | 隔蛋白6同种型B |
SERF1A | NM_021967 | 小的EDRK丰富因子1A,端粒 |
SERF1B | NM_022978 | 小的EDRK丰富因子1B,着丝粒 |
SERINC1 | NM_020755 | 肿瘤差异表达的2 |
SERP1 | NM_014445 | 应激相关内质网蛋白质 |
SERPINB8 | NM_002640 | 丝氨酸(或半胱氨酸)蛋白酶抑制剂,进化枝 |
SERPINE1 | NM_000602 | 纤溶酶原激活物抑制剂-1 |
SERTAD2 | NM_014755 | 含SERTA结构域2 |
SESN1 | NM_014454 | sestrin1 |
SESN2 | NM_031459 | sestrin2 |
SET | NM_003011 | SET易位(髓性白血病-相关) |
SETD2 | NM_014159 | 亨廷顿蛋白相互作用蛋白质B |
SETD4 | NM_001007258 | 假定蛋白LOC54093同种型b |
SEZ6 | NM_178860 | 癫痫发作相关6同系物 |
SF4 | NM_182812 | 剪接因子4同种型c |
SFMBT1 | NM_001005158 | 具4个mbt结构域的Scm样1 |
SFRP1 | NM_003012 | 分泌的frizzled相关蛋白1 |
SFRP2 | NM_003013 | 分泌的frzzled相关蛋白2前体 |
SFRS14 | NM_001017392 | 剪接因子,精氨酸/丝氨酸丰富14 |
SFRS2 | NM_003016 | 剪接因子,精氨酸/丝氨酸丰富2 |
SFT2D2 | NM_199344 | 含SFT2结构域2 |
SFXN2 | NM_178858 | sideroflexin2 |
SFXN5 | NM_144579 | sideroflexin5 |
SGCD | NM_000337 | δ-肌聚糖同种型1 |
SGK3 | NM_001033578 | 血清/糖皮质激素调节的激酶3同种型 |
SGPL1 | NM_003901 | 鞘氨醇-1-磷酸裂合酶1 |
SH2D3A | NM_005490 | 含SH2结构域3A |
SH3BGRL2 | NM_031469 | SH3结构域结合谷氨酸丰富蛋白质 |
SH3BP5 | NM_001018009 | SH3-结构域结合蛋白5(BTK-相关) |
SH3GL3 | NM_003027 | SH3-结构域GRB2样3 |
SH3PX3 | NM_153271 | 含SH3和PX结构域3 |
SH3PXD2A | NM_014631 | SH3多结构域1 |
SH3RF2 | NM_152550 | 含SH3结构域环指2 |
SHANK2 | NM_012309 | SH3和多锚蛋白重复结构域2 |
SHCBP1 | NM_024745 | SHC SH2-结构域结合蛋白1 |
SHE | NM_001010846 | 含Src同源物2结构域E |
SHF | NM_138356 | 假定蛋白LOC90525 |
SHMT2 | NM_005412 | 丝氨酸羟甲基转移酶2 |
SHOC2 | NM_007373 | 清晰化基因同系物soc-2抑制蛋白 |
SIAE | NM_170601 | 胞质的唾液酸9-O-乙酰酯酶 |
SIDT1 | NM_017699 | SID1跨膜家族,成员1 |
SIGLEC10 | NM_033130 | 唾液酸结合Ig样凝集素10 |
SIGLEC11 | NM_052884 | 唾液酸结合Ig样凝集素11 |
SIKE | NM_025073 | IKKε抑制蛋白 |
SIM2 | NM_009586 | single-minded同系物2短同种型 |
SIN3B | NM_015260 | SIN3同系物B,转录调节物 |
SIPA1L3 | NM_015073 | 信号诱导增殖相关1样 |
SIRT3 | NM_001017524 | sirtuin3同种型b |
SIRT7 | NM_016538 | sirtuin7 |
SKI | NM_003036 | v-ski肉瘤病毒癌基因同系物 |
SLAMF7 | NM_021181 | SLAM家族成员7 |
SLC11A1 | NM_000578 | 溶质运载体家族11(质子偶联的 |
SLC12A7 | NM_006598 | 溶质运载体家族12(钾/氯化物 |
SLC13A1 | NM_022444 | 溶质运载体家族13(钠/硫酸盐 |
SLC14A1 | NM_015865 | RACH1 |
SLC14A2 | NM_007163 | 溶质运载体家族14(尿素转运蛋白), |
SLC16A12 | NM_213606 | 溶质运载体家族16(一元羧酸 |
SLC16A14 | NM_152527 | 溶质运载体家族16(一元羧酸 |
SLC16A2 | NM_006517 | 溶质运载体家族16,成员2 |
SLC16A7 | NM_004731 | 溶质运载体家族16,成员7 |
SLC16A9 | NM_194298 | 溶质运载体家族16(一元羧酸 |
SLC17A5 | NM_012434 | 溶质运载体家族17(阴离子/糖 |
SLC17A7 | NM_020309 | 溶质运载体家族17,成员7 |
SLC17A8 | NM_139319 | 溶质运载体家族17(钠依赖的 |
SLC19A3 | NM_025243 | 溶质运载体家族19,成员3 |
SLC1A2 | NM_004171 | 溶质运载体家族1,成员2 |
SLC1A4 | NM_003038 | 溶质运载体家族1,成员4 |
SLC22A15 | NM_018420 | 溶质运载体家族22(有机阳离子 |
SLC22A2 | NM_003058 | 溶质运载体家族22成员2同种型a |
SLC22A3 | NM_021977 | 溶质运载体家族22成员3 |
SLC22A5 | NM_003060 | 溶质运载体家族22成员5 |
SLC23A3 | NM_144712 | 溶质运载体家族23(核碱基 |
SLC24A3 | NM_020689 | 溶质运载体家族24 |
SLC24A4 | NM_153646 | 溶质运载体家族24成员4同种型1 |
SLC25A10 | NM_012140 | 溶质运载体家族25(线粒体运载体, |
SLC25A13 | NM_014251 | 溶质运载体家族25,成员13(citrin) |
SLC25A24 | NM_013386 | 溶质运载体家族25成员24同种型1 |
SLC25A27 | NM_004277 | 溶质运载体家族25,成员27 |
SLC25A34 | NM_207348 | 溶质运载体家族25,成员34 |
SLC26A4 | NM_000441 | 潘蛋白 |
SLC26A7 | NM_052832 | 溶质运载体家族26,成员7同种型a |
SLC29A2 | NM_001532 | 溶质运载体家族29(核苷 |
SLC2A11 | NM_030807 | 葡萄糖转运蛋白质10同种型a |
SLC2A2 | NM_000340 | 溶质运载体家族2(易化葡萄糖 |
SLC2A3 | NM_006931 | 溶质运载体家族2(易化葡萄糖 |
SLC2A4 | NM_001042 | 葡萄糖转运蛋白4 |
SLC2A4RG | NM_020062 | SLC2A4调节物 |
SLC2A5 | NM_003039 | 溶质运载体家族2(易化 |
SLC2A6 | NM_017585 | 溶质运载体家族2(易化葡萄糖 |
SLC30A10 | NM_001004433 | 溶质运载体家族30(锌转运蛋白), |
SLC30A3 | NM_003459 | 溶质运载体家族30(锌转运蛋白), |
SLC30A7 | NM_133496 | 锌转运蛋白样2 |
SLC31A1 | NM_001859 | 溶质运载体家族31(铜转运蛋白), |
SLC35A5 | NM_017945 | 溶质运载体家族35,成员A5 |
SLC35B4 | NM_032826 | 溶质运载体家族35,成员B4 |
SLC35E1 | NM_024881 | 溶质运载体家族35,成员E1 |
SLC35E3 | NM_018656 | 溶质运载体家族35,成员E2 |
SLC35F3 | NM_173508 | 溶质运载体家族35,成员F3 |
SLC35F5 | NM_025181 | 溶质运载体家族35,成员F5 |
SLC36A1 | NM_078483 | 溶质运载体家族36成员1 |
SLC36A2 | NM_181776 | 溶质运载体家族36(质子/氨基酸 |
SLC37A4 | NM_001467 | 溶质运载体家族37(甘油-6-磷酸 |
SLC40A1 | NM_014585 | 溶质运载体家族40(铁调节的 |
SLC41A1 | NM_173854 | 溶质运载体家族41成员1 |
SLC44A4 | NM_025257 | NG22蛋白质同种型1 |
SLC45A2 | NM_001012509 | 膜相关转运蛋白质同种型 |
SLC4A7 | NM_003615 | 溶质运载体家族4,碳酸氢钠 |
SLC5A12 | NM_178498 | 溶质运载体家族5(钠/葡萄糖 |
SLC5A7 | NM_021815 | 溶质运载体家族5(胆碱转运蛋白), |
SLC6A8 | NM_005629 | 溶质运载体家族6(神经递质 |
SLC6A9 | NM_001024845 | 溶质运载体家族6成员9同种型3 |
SLC7A11 | NM_014331 | 溶质运载体家族7,(阳离子氨基酸 |
SLC7A2 | NM_001008539 | 溶质运载体家族7,成员2同种型1 |
SLC7A6 | NM_003983 | 溶质运载体家族7(阳离子氨基酸 |
SLC9A2 | NM_003048 | 溶质运载体家族9(钠/氢 |
SLC9A3R1 | NM_004252 | 溶质运载体家族9(钠/氢 |
SLC9A6 | NM_006359 | 溶质运载体家族9(钠/氢 |
SLC9A8 | NM_015266 | Na+/H+交换剂同种型8 |
SLC9A9 | NM_173653 | 溶质运载体家族9(钠/氢 |
SLCO1C1 | NM_017435 | 溶质运载体有机阴离子转运蛋白家族, |
SLCO4C1 | NM_180991 | 溶质运载体有机阴离子转运蛋白家族, |
SLD5 | NM_032336 | SLD5 |
SLITRK2 | NM_032539 | SLIT和NTRK样家族,成员2 |
SLITRK3 | NM_014926 | slit和trk样3蛋白质 |
SLK | NM_014720 | 丝氨酸/苏氨酸激酶2 |
SLTM | NM_001013843 | 雌激素诱导转录调节物 |
SMA4 | NM_021652 | SMA4 |
SMA5 | NM_021036 | SMA5 |
SMAD1 | NM_001003688 | Sma和Mad相关蛋白1 |
SMAD2 | NM_001003652 | Sma和Mad相关蛋白2 |
SMAD5 | NM_001001419 | SMAD(mothers against DPP)同系物5 |
SMAD6 | NM_005585 | MAD(mothers against decapentaplegic)同系物6 |
SMAD7 | NM_005904 | MAD(mothers against decapentaplegic)同系物7 |
SMC1L1 | NM_006306 | SMC1染色体结构维持蛋白 |
SMC1L2 | NM_148674 | SMC1染色体结构维持蛋白 |
SMC4L1 | NM_001002799 | SMC4染色体结构维持蛋白 |
SMEK2 | NM_020463 | 假定蛋白LOC57223 |
SMG1 | NM_015092 | PI-3-激酶相关激酶SMG-1 |
SMOC1 | NM_022137 | 分泌的模块钙-结合蛋白1 |
SMOC2 | NM_022138 | 分泌的模块钙-结合蛋白2 |
SMYD1 | NM_198274 | 含SET和MYND结构域1 |
SMYD4 | NM_052928 | 含SET和MYND结构域4 |
SNAP23 | NM_003825 | 突触小体相关蛋白23同种型 |
SNAPC4 | NM_003086 | 小的核RNA激活复合体, |
SNF1LK | NM_173354 | SNF1样激酶 |
SNPH | NM_014723 | 伸展蛋白 |
SNRK | NM_017719 | SNF相关激酶 |
SNRPD3 | NM_004175 | 小的核核糖核蛋白多肽D3 |
SNX11 | NM_013323 | 分拣微管连接蛋白11 |
SNX16 | NM_022133 | 分拣微管连接蛋白16同种型a |
SNX19 | NM_014758 | 分拣微管连接蛋白19 |
SNX22 | NM_024798 | 分拣微管连接蛋白22 |
SNX27 | NM_030918 | 分拣微管连接蛋白家族成员27 |
SNX9 | NM_016224 | 分拣微管连接蛋白9 |
SOCS6 | NM_004232 | 细胞因子信号抑制蛋白6 |
SOD2 | NM_000636 | 锰超氧化物歧化酶同种型A |
SOLH | NM_005632 | 小的视叶 |
SORBS2 | NM_003603 | 含山梨糖和SH3结构域2同种型1 |
SORL1 | NM_003105 | 含选蛋白相关受体LDLR类 |
SORT1 | NM 002959 | 选蛋白1前蛋白原 |
SOX1 | NM_005986 | SRY(性别决定区Y)-盒1 |
SOX12 | NM_006943 | SRY(性别决定区Y)-盒12 |
SOX4 | NM_003107 | SRY(性别决定区Y)-盒4 |
SOX7 | NM_031439 | SRY-盒7 |
SP140 | NM_007237 | SP140核体蛋白质同种型1 |
SP4 | NM_003112 | Sp4转录因子 |
SP6 | NM_199262 | Sp6转录因子 |
SP8 | NM_182700 | Sp8转录因子同种型1 |
SPACA1 | NM_030960 | 精子顶体相关的1 |
SPACA4 | NM_133498 | 精子顶体膜蛋白质14 |
SPARC | NM_003118 | 分泌的蛋白质,酸性,半胱氨酸丰富 |
SPATA13 | NM_153023 | 精子发生相关的13 |
SPATA3 | NM_139073 | 睾丸和精子发生细胞细胞凋亡 |
SPATS2 | NM_023071 | 精子发生相关的,丝氨酸丰富2 |
SPBC24 | NM_182513 | 纺锤体极体成分24同系物 |
SPECC1 | NM_001033553 | 具卷曲螺旋的血影蛋白结构域1NSP5b3b |
SPFH1 | NM_006459 | SPFH结构域家族,成员1 |
SPFH2 | NM_007175 | SPFH结构域家族,成员2同种型1 |
SPG20 | NM_015087 | Spartin |
SPIRE2 | NM_032451 | spire同系物2 |
SPN | NM_001030288 | 诞福林 |
SPOCK1 | NM_004598 | sparc/骨粘连蛋白,cwcv和kazal样结构域 |
SPOCK2 | NM_014767 | sparc/骨粘连蛋白,cwcv和kazal样结构域 |
SPRN | NM_001012508 | 朊病毒蛋白质阴影 |
SPRR2B | NM_001017418 | 小的脯氨酸丰富蛋白质2B |
SPRR2E | NM_001024209 | 小的脯氨酸丰富蛋白质2E |
SPRR2F | NM_001014450 | 小的脯氨酸丰富蛋白质2F |
SPRY4 | NM_030964 | sprouty同系物4 |
SPSB4 | NM_080862 | 含SPRY结构域SOCS盒蛋白质SSB-4 |
SPTBN4 | NM_020971 | 血影蛋白,β,非红细胞4同种型1 |
SPTLC1 | NM_178324 | 丝氨酸棕榈酰转移酶亚基1同种型b |
SPTLC2 | NM_004863 | 丝氨酸棕榈酰转移酶,长链碱基 |
SPTY2D1 | NM_194285 | 假定蛋白LOC144108 |
SQSTM1 | NM_003900 | 死骨片1 |
SRD5A2L2 | NM_001010874 | 类固醇5α-还原酶2样2 |
SRGAP3 | NM_001033116 | SLIT-ROBO Rho GTP酶激活素3 |
SRI | NM_003130 | 抗药蛋白同种型a |
SRP72 | NM_006947 | 信号识别颗粒72kDa |
SRPK1 | NM_003137 | SFRS蛋白质激酶1 |
SRPK2 | NM_182691 | SFRS蛋白质激酶2同种型b |
SRXN1 | NM_080725 | 硫氧还蛋白1同系物 |
SS18L1 | NM_015558 | SS18样蛋白质1 |
SSBP3 | NM_001009955 | 单链DNA结合蛋白3同种型c |
SSFA2 | NM_006751 | 精子特异性抗原2 |
SSH2 | NM_033389 | slingshot(丝切肌动蛋白)2 |
SSPN | NM_005086 | Sarcospan |
SSR3 | NM_007107 | 信号序列受体γ亚基 |
SSTR2 | NM_001050 | 促生长素抑制素受体2 |
SSX2IP | NM_014021 | 滑膜肉瘤,X断裂点2相互作用 |
ST3GAL1 | NM_003033 | 唾液酰基转移酶4A |
ST6GAL1 | NM_003032 | 唾液酰基转移酶1同种型a |
ST6GALNAC3 | NM_152996 | ST6 |
ST6GALNAC6 | NM_013443 | ST6 |
ST8SIA2 | NM_006011 | ST8α-N-乙酰基-神经氨酸苷 |
ST8SIA4 | NM_005668 | ST8α-N-乙酰基-神经氨酸苷 |
STAC | NM_003149 | SH3和半胱氨酸丰富结构域 |
STAC2 | NM_198993 | SH3和半胱氨酸丰富结构域2 |
STAM2 | NM_005843 | 信号转导衔接子分子2 |
STAR | NM_000349 | 类固醇生成急性调节物同种型1 |
STARD8 | NM_014725 | 含START结构域8 |
STAT1 | NM_007315 | 信号传导子及转录激活子 |
STAT3 | NM_003150 | 信号传导子及转录激活子 |
STAT5B | NM_012448 | 信号传导子及转录激活子 |
STC1 | NM_003155 | 司腺钙蛋白1前体 |
STIM1 | NM_003156 | 基质相互作用分子1前体 |
STIM2 | NM_020860 | 基质相互作用分子2 |
STK11 | NM_000455 | 丝氨酸/苏氨酸蛋白质激酶11 |
STK11IP | NM_052902 | LKB1相互作用蛋白质 |
STK17B | NM_004226 | 丝氨酸/苏氨酸激酶17b |
STK33 | NM_030906 | 丝氨酸/苏氨酸激酶33 |
STK38 | NM_007271 | 丝氨酸/苏氨酸激酶38 |
STK4 | NM_006282 | 丝氨酸/苏氨酸激酶4 |
STOM | NM_004099 | stomatin同种型a |
STRBP | NM_018387 | 精子细胞核周RNA结合蛋白质 |
STRN3 | NM_014574 | 核自身抗原 |
STS-1 | NM_032873 | Cbl-相互作用蛋白质Sts-1 |
STX6 | NM_005819 | 突触融合蛋白6 |
STYX | NM_145251 | 丝氨酸/苏氨酸/酪氨酸相互作用蛋白质 |
SUDS3 | NM_022491 | 缺陷沉默抑制蛋白3 |
SUHW2 | NM_080764 | 毛翅同系物2抑制蛋白 |
SUHW3 | NM_017666 | 毛翅同系物3抑制蛋白 |
SUHW4 | NM_001002843 | 毛翅同系物4抑制蛋白同种型2 |
SULF1 | NM_015170 | 硫酸酯酶1 |
SULT2A1 | NM_003167 | 磺基转移酶家族,胞质的,2A, |
SUMF1 | NM_182760 | 硫酸酯酶修饰因子1 |
SUPT7L | NM_014860 | SPTF相关因子65γ |
SUSD1 | NM_022486 | 含sushi结构域1 |
SUV39H2 | NM_024670 | 花斑抑制蛋白3-9同系物2 |
SUV420H1 | NM_017635 | 花斑抑制蛋白4-20同系物1同种型 |
SVH | NM_031905 | SVH蛋白质 |
SWAP70 | NM_015055 | SWAP-70蛋白质 |
SYAP1 | NM_032796 | SYAP1蛋白质 |
SYNE1 | NM_015293 | nesprin 1同种型β |
SYNE2 | NM_015180 | 含血影蛋白重复,核膜2 |
SYNGR2 | NM_004710 | 突触循环蛋白2 |
SYNJ2BP | NM_018373 | 突触小泡磷酸酶2结合蛋白质 |
SYNPO2 | NM_133477 | 突触足蛋白2 |
SYNPO2L | NM_024875 | 突触足蛋白2样 |
SYT10 | NM_198992 | 突触结合蛋白10 |
SYT13 | NM_020826 | 突触结合蛋白XIII |
SYT15 | NM_031912 | 突触结合蛋白XV同种型a |
SYT7 | NM_004200 | 突触结合蛋白VII |
SYTL4 | NM_080737 | 突触结合蛋白样4(粒亲蛋白(granuphilin)-a) |
TACC1 | NM_006283 | 转化,含酸性卷曲螺旋 |
TAF7 | NM_005642 | TATA盒结合蛋白质相关因子2F |
TAF9B | NM_015975 | 转录相关因子9B |
TAGAP | NM_054114 | T细胞活化Rho GTP酶活化蛋白 |
TAIP-2 | NM_024969 | TGF-β诱导的细胞凋亡蛋白质2 |
TAL1 | NM_003189 | T细胞急性淋巴细胞白血病1 |
TANC1 | NM_033394 | TPR结构域,锚蛋白重复和 |
TAOK2 | NM_016151 | TAO激酶2同种型2 |
TAOK3 | NM_016281 | TAO激酶3 |
TAPBP | NM_172208 | 甲巯蛋白同种型2前体 |
TAT | NM_000353 | 酪氨酸氨基转移酶 |
TAX1BP1 | NM_006024 | Tax1(人T细胞白血病病毒类型I) |
TBC1D1 | NM_015173 | TBC1(tre-2/USP6,BUB2,cdc16)结构域家族, |
TBC1D10C | NM_198517 | TBC1结构域家族,成员10C |
TBC1D15 | NM_022771 | TBC1结构域家族,成员15 |
TBC1D17 | NM_024682 | TBC1结构域家族,成员17 |
TBC1D2 | NM_018421 | TBC1结构域家族,成员2 |
TBC1D4 | NM_014832 | TBC1结构域家族,成员4 |
TBC1D8 | NM_007063 | TBC1结构域家族,成员8 |
TBC1D9 | NM_015130 | 假定蛋白LOC23158 |
TBL1X | NM_005647 | 转导蛋白β样1X |
TBRG1 | NM_032811 | 转化生长因子β调节物1 |
TBX19 | NM_005149 | T-盒19 |
TBX3 | NM_005996 | T-盒3蛋白质同种型1 |
TCEAL7 | NM_152278 | 假定蛋白LOC56849 |
TCEB3 | NM_003198 | 延伸蛋白A |
TCF21 | NM_003206 | 转录因子21 |
TCF7 | NM_003202 | 转录因子7(T细胞特异性, |
TCF7L1 | NM_031283 | HMG-盒转录因子TCF-3 |
TCL6 | NM_014418 | T细胞白血病/淋巴瘤6同种型TCL6a2 |
TCN2 | NM_000355 | 钴胺传递蛋白II前体 |
TCOF1 | NM_001008657 | Treacher Collins-Franceschetti综合征1 |
TCTA | NM_022171 | T细胞白血病易位改变基因 |
TCTEX1D1 | NM_152665 | 假定蛋白LOC200132 |
TDRD1 | NM_198795 | 含tudor结构域1 |
TEGT | NM_003217 | 睾丸增强的基因转录物(BAX抑制剂 |
TEK | NM_000459 | TEK酪氨酸激酶,内皮前体 |
TEP1 | NM_007110 | 端粒酶相关蛋白1 |
TESC | NM_017899 | Tescalcin |
TEX14 | NM_031272 | 睾丸表达的序列14同种型b |
TEX15 | NM_031271 | 睾丸表达的序列15 |
TEX261 | NM_144582 | 睾丸表达的序列261 |
TFEC | NM_001018058 | 转录因子EC同种型b |
TGFB1I1 | NM_015927 | 雄激素受体辅激活物ARA55 |
TGFB2 | NM_003238 | 转化生长因子,β2 |
TGFBI | NM_000358 | 转化生长因子,β-诱导的,68kDa |
TGFBR2 | NM_001024847 | TGF-β类型II受体同种型A前体 |
TGM2 | NM_198951 | 转谷氨酰胺酶2同种型b |
TGM3 | NM_003245 | 转谷氨酰胺酶3前体 |
TGOLN2 | NM_006464 | 高尔基体反面网络结构蛋白质2 |
THADA | NM_198554 | 甲状腺腺瘤相关的同种型2 |
THAP2 | NM_031435 | 含THAP结构域,细胞凋亡相关的 |
THAP6 | NM_144721 | 含THAP结构域6 |
THBD | NM_000361 | 凝血调节蛋白前体 |
THBS2 | NM_003247 | 血小板反应蛋白2前体 |
THEDC1 | NM_018324 | 含硫酯酶结构域1同种型1 |
THEM4 | NM_053055 | 硫酯酶超家族成员4同种型a |
THEM5 | NM_182578 | 硫酯酶超家族成员5 |
THEX1 | NM_153332 | 组蛋白mRNA 3′末端-特异性外切核酸酶 |
THRA | NM_199334 | 甲状腺激素受体,α同种型1 |
THSD3 | NM_182509 | 血小板反应蛋白,含类型I结构域3 |
THUMPD1 | NM_017736 | 含THUMP结构域1 |
TIFA | NM_052864 | TRAF-相互作用蛋白质具有 |
TIMM10 | NM_012456 | 线粒体内膜移位酶10 |
TIMM17A | NM_006335 | 线粒体内膜移位酶17 |
TIMM44 | NM_006351 | 线粒体内膜移位酶44 |
TIMM50 | NM_001001563 | 线粒体内膜移位酶50 |
TIMP2 | NM_003255 | 金属蛋白酶组织抑制剂2 |
TIMP3 | NM_000362 | 金属蛋白酶组织抑制剂3 |
TIPARP | NM_015508 | TCDD-可诱导的聚(ADP-核糖)聚合酶 |
TJP1 | NM_003257 | 紧密连接蛋白质1同种型a |
TLE4 | NM_007005 | 转导蛋白样增强子蛋白质4 |
TLL1 | NM_012464 | tolloid样1 |
TLOC1 | NM_003262 | 易位蛋白质1 |
TLR7 | NM_016562 | toll样受体7 |
TM2D2 | NM_001024380 | 含TM2结构域2同种型b |
TMBIM4 | NM_016056 | 含跨膜BAX抑制剂模体4 |
TMC7 | NM_024847 | 跨膜通道样7 |
TMCC1 | NM_001017395 | 跨膜和卷曲螺旋结构域1同种型 |
TMCC3 | NM_020698 | 跨膜和卷曲螺旋结构域3 |
TMED5 | NM_016040 | 跨膜emp24蛋白质转运结构域 |
TMEM1 | NM_001001723 | 跨膜蛋白质1同种型b |
TMEM105 | NM_178520 | 假定蛋白LOC284186 |
TMEM113 | NM_025222 | 假定蛋白PRO2730 |
TMEM123 | NM_052932 | 前细胞胀亡受体诱导膜损伤 |
TMEM127 | NM_017849 | 假定蛋白LOC55654 |
TMEM130 | NM_152913 | 假定蛋白LOC222865 |
TMEM133 | NM_032021 | 假定蛋白LOC83935 |
TMEM135 | NM_022918 | 假定蛋白LOC65084 |
TMEM138 | NM_016464 | 假定蛋白LOC51524 |
TMEM16E | NM_213599 | 跨膜蛋白质16E |
TMEM16F | NM_001025356 | 跨膜蛋白质16F |
TMEM17 | NM_198276 | 跨膜蛋白质17 |
TMEM18 | NM_152834 | 跨膜蛋白质18 |
TMEM23 | NM_147156 | 磷脂酰胆碱:神经酰胺 |
TMEM25 | NM_032780 | 跨膜蛋白质25 |
TMEM26 | NM_178505 | 跨膜蛋白质26 |
TMEM28 | NM_015686 | 跨膜蛋白质28 |
TMEM30A | NM_018247 | 跨膜蛋白质30A |
TMEM38A | NM_024074 | 跨膜蛋白质38A |
TMEM40 | NM_018306 | 跨膜蛋白质40 |
TMEM41A | NM_080652 | 跨膜蛋白质41A |
TMEM45B | NM_138788 | 跨膜蛋白质45B |
TMEM50B | NM_006134 | 跨膜蛋白质50B |
TMEM56 | NM_152487 | 跨膜蛋白质56 |
TMEM64 | NM_001008495 | 跨膜蛋白质64 |
TMEM71 | NM_144649 | 假定蛋白LOC137835 |
TMEM77 | NM_178454 | 假定蛋白LOC128338 |
TMEM80 | NM_174940 | 假定蛋白LOC283232 |
TMEM83 | NM_152454 | 假定蛋白LOC145978 |
TMOD1 | NM_003275 | 原肌球调节蛋白1 |
TMOD2 | NM_014548 | 原肌球调节蛋白2(神经元) |
TMPO | NM_001032283 | 胸腺生成素同种型β |
TMPRSS11B | NM_182502 | 跨膜蛋白酶,丝氨酸11B |
TMTC2 | NM_152588 | 假定蛋白LOC160335 |
TNFAIP1 | NM_021137 | 肿瘤坏死因子,α-诱导的蛋白质1 |
TNFAIP3 | NM_006290 | 肿瘤坏死因子,α-诱导的蛋白质3 |
TNFAIP8L1 | NM_152362 | 肿瘤坏死因子,α-诱导的蛋白质 |
TNFAIP8L2 | NM_024575 | 肿瘤坏死因子,α-诱导的蛋白质 |
TNFAIP8L3 | NM_207381 | 肿瘤坏死因子,α-诱导的蛋白质 |
TNFRSF10A | NM_003844 | 肿瘤坏死因子受体超家族, |
TNFRSF10B | NM_003842 | 肿瘤坏死因子受体超家族, |
TNFRSF10D | NM_003840 | 肿瘤坏死因子受体超家族, |
TNFRSF17 | NM_001192 | 肿瘤坏死因子受体超家族, |
TNFRSF19 | NM_148957 | 肿瘤坏死因子受体超家族, |
TNFRSF1B | NM_001066 | 肿瘤坏死因子受体2前体 |
TNFRSF21 | NM_014452 | 肿瘤坏死因子受体超家族, |
TNFSF11 | NM_003701 | 肿瘤坏死因子配体超家族,成员 |
TNFSF14 | NM_003807 | 肿瘤坏死因子配体超家族,成员 |
TNFSF15 | NM_005118 | 肿瘤坏死因子(配体)超家族, |
TNIP3 | NM_024873 | 假定蛋白LOC79931 |
TNK2 | NM_001010938 | 酪氨酸激酶,非受体,2同种型2 |
TNKS1BP1 | NM_033396 | 182kDa的端锚聚合酶1-结合蛋白 |
TNKS2 | NM_025235 | 端锚聚合酶,TRF1-相互作用锚蛋白相关 |
TNNI1 | NM_003281 | 肌钙蛋白I,骨骼的,慢的 |
TNRC6A | NM_014494 | 含三核苷酸重复6A同种型1 |
TNRC6B | NM_001024843 | 含三核苷酸重复6B同种型2 |
TOLLIP | NM_019009 | toll相互作用蛋白质 |
TOMM40L | NM_032174 | 线粒体外膜易位酶40 |
TOMM7 | NM_019059 | 6.2kd蛋白质 |
TOMM70A | NM_014820 | 线粒体外膜易位酶70 |
top3A | NM_004618 | 拓扑异构酶(DNA)IIIα |
拓扑RS | NM_005802 | 拓扑异构酶I结合,精氨酸/丝氨酸丰富 |
TOR1B | NM_014506 | 扭蛋白(torsin)家族1,成员B(扭蛋白B) |
TP53INP1 | NM_033285 | 肿瘤蛋白质p53可诱导的核蛋白质1 |
TP53INP2 | NM_021202 | 肿瘤蛋白质p53可诱导的核蛋白质2 |
TPD52 | NM_001025252 | 肿瘤蛋白质D52同种型1 |
TPK1 | NM_022445 | 硫胺素焦磷酸激酶1 |
TPM4 | NM_003290 | 原肌球蛋白4 |
TRA16 | NM_176880 | TR4孤儿受体相关蛋白TRA16 |
TRAK1 | NM_014965 | OGT(O-Glc-NAc转移酶)-相互作用蛋白质 |
TRAM1 | NM_014294 | 易位链相关膜 |
TRAM2 | NM_012288 | 易位相关膜蛋白质2 |
TRAPPC2 | NM_001011658 | 转运蛋白质复合粒子2 |
TRIAD3 | NM_019011 | TRIAD3蛋白质同种型c |
TRIAP1 | NM_016399 | p53-可诱导的细胞存活因子 |
TRIB3 | NM_021158 | tribbles 3 |
TRIM10 | NM_052828 | 含三分模体10同种型2 |
TRIM2 | NM_015271 | 含三分模体2 |
TRIM22 | NM_006074 | 含三分模体22 |
TRIM26 | NM_003449 | 含三分模体26 |
TRIM3 | NM_006458 | 含三分模体3 |
TRIM31 | NM_052816 | 三分模体蛋白质31同种型β |
TRIM32 | NM_012210 | TAT-相互作用蛋白,72-KD |
TRIM33 | NM_015906 | 含三分模体33蛋白质同种型 |
TRIM36 | NM_018700 | 含三分模体36同种型1 |
TRIM37 | NM_015294 | 含三分模体37蛋白质 |
TRIM4 | NM_033017 | 三分模体蛋白质TRIM4同种型α |
TRIM55 | NM_033058 | 环指蛋白29同种型2 |
TRIM56 | NM_030961 | 含三分模体56 |
TRIM58 | NM_015431 | 含三分模体58 |
TRIM65 | NM_173547 | 含三分模体65 |
TRIM68 | NM_018073 | 环指蛋白137 |
TRIM7 | NM_203293 | 含三分模体7同种型1 |
TRIM8 | NM_030912 | 含三分模体8 |
TRIM9 | NM_052978 | 三分模体蛋白质9同种型2 |
TRIP10 | NM_004240 | 甲状腺激素受体结合因子10 |
TRIP11 | NM_004239 | 甲状腺激素受体结合因子11 |
TRMU | NM_001008568 | tRNA 5-甲基氨甲基-2-硫尿苷酸 |
TRPA1 | NM_007332 | 锚蛋白样蛋白质1 |
TRPC1 | NM_003304 | 瞬时受体电位阳离子通道, |
TRPC4 | NM_016179 | 瞬时受体电位4 |
TRPM1 | NM_002420 | 瞬时受体电位阳离子通道, |
TRPM6 | NM_017662 | 瞬时受体电位阳离子通道, |
TRPS1 | NM_014112 | 锌指转录因子TRPS1 |
TRPV6 | NM_018646 | 瞬时受体电位阳离子通道, |
TRSPAP1 | NM_017846 | tRNA硒代半胱氨酸相关蛋白 |
TRUB1 | NM_139169 | TruB假尿苷(psi)合酶同系物1 |
TSC22D2 | NM_014779 | TSC22结构域家族2 |
TSCOT | NM_033051 | 胸腺基质共-转运蛋白 |
TSEN2 | NM_025265 | tRNA剪接内切核酸酶2同系物 |
TSG101 | NM_006292 | 肿瘤易感性基因101 |
TSHZ3 | NM_020856 | 锌指蛋白537 |
TSNAX | NM_005999 | 易位蛋白相关因子X |
TSPAN14 | NM_030927 | 四跨膜蛋白(tetraspanin)14 |
TSPAN17 | NM_001006616 | 4次跨膜超家族成员17同种型c |
TSPAN4 | NM_001025234 | 四跨膜蛋白4同种型a |
TSPAN9 | NM_006675 | 四跨膜蛋白9 |
TSPYL1 | NM_003309 | TSPY样1 |
TSR1 | NM_018128 | 假定蛋白LOC55720 |
TTF2 | NM_003594 | 转录终止因子,RNA聚合酶 |
TTL | NM_153712 | 微管蛋白酪氨酸连接酶 |
TTLL6 | NM_173623 | 假定蛋白LOC284076 |
TTN | NM_003319 | 肌联蛋白同种型N2-B |
TULP3 | NM_003324 | Tubby样蛋白质3 |
TUSC2 | NM_007275 | 肿瘤抑制物候选物2 |
TWIST1 | NM_000474 | 扭转 |
TXLNA | NM_175852 | 滑行蛋白 |
TXNDC10 | NM_019022 | 含硫氧还蛋白结构域10 |
TXNDC4 | NM_015051 | 含硫氧还蛋白结构域4(内质 |
TXNIP | NM_006472 | 硫氧还蛋白相互作用蛋白质 |
TXNL2 | NM_006541 | 硫氧还蛋白样 |
TYRP1 | NM_000550 | 酪氨酸酶相关蛋白1 |
UACA | NM_001008224 | 具有卷曲螺旋结构域的眼球血管膜自身抗原 |
UBAP1 | NM_016525 | 遍在蛋白相关蛋白1 |
UBASH3A | NM_001001895 | 遍在蛋白相关的和含SH3结构域 |
UBC | NM_021009 | 遍在蛋白C |
UBE2B | NM_003337 | 遍在蛋白缀合酶E2B |
UBE2G1 | NM_003342 | 遍在蛋白缀合酶E2G1同种型1 |
UBE2G2 | NM_003343 | 遍在蛋白缀合酶E2G2同种型1 |
UBE2J1 | NM_016021 | 遍在蛋白缀合酶E2,J1 |
UBE2Q2 | NM_173469 | 遍在蛋白缀合酶E2Q(假定的)2 |
UBE2W | NM_001001481 | 假定蛋白LOC55284同种型1 |
UBE3A | NM_000462 | 遍在蛋白蛋白质连接酶E3A同种型2 |
UBE3C | NM_014671 | 遍在蛋白蛋白质连接酶E3C |
UBE4A | NM_004788 | 遍在蛋白化因子E4A |
UBL4A | NM_014235 | 遍在蛋白样4 |
UBOX5 | NM_014948 | 含U-盒结构域5同种型a |
UBQLN1 | NM_013438 | 遍在蛋白相关性早老作用蛋白1同种型1 |
UBQLN4 | NM_020131 | 共济失调蛋白-1遍在蛋白样相互作用蛋白质 |
UBXD4 | NM_181713 | 含UBX结构域4 |
UBXD8 | NM_014613 | 含UBX结构域8 |
UCP3 | NM_003356 | 解偶联蛋白质3同种型UCP3L |
UEV3 | NM_018314 | 遍在蛋白缀合酶E2样 |
UGDH | NM_003359 | UDP-葡萄糖脱氢酶 |
UGP2 | NM_001001521 | UDP-葡萄糖焦磷酸化酶2同种型b |
ULK1 | NM_003565 | unc-51样激酶1 |
UNC5C | NM_003728 | unc5C |
UNC5CL | NM_173561 | unc-5同系物C样 |
UNC93B1 | NM_030930 | unc-93同系物B1 |
UNQ9370 | NM_207447 | 假定蛋白LOC400454 |
UPF3A | NM_023011 | 无义转录物UPF3调节物同系物A |
UPK1A | NM_007000 | 尿斑蛋白(uroplakin)1A |
UPK1B | NM_006952 | 尿斑蛋白1B |
UPP1 | NM_003364 | 尿苷磷酸化酶1 |
UQCRB | NM_006294 | 泛醇-细胞色素c还原酶结合 |
URB | NM_199511 | 类固醇敏感蛋白质1 |
URG4 | NM_017920 | 假定蛋白LOC55665 |
USP14 | NM_005151 | 遍在蛋白特异性蛋白酶14同种型a |
USP25 | NM_013396 | 遍在蛋白特异性蛋白酶25 |
USP28 | NM_020886 | 遍在蛋白特异性蛋白酶28 |
USP3 | NM_006537 | 遍在蛋白特异性蛋白酶3 |
USP32 | NM_032582 | 遍在蛋白特异性蛋白酶32 |
USP33 | NM_015017 | 遍在蛋白特异性蛋白酶33同种型1 |
USP37 | NM_020935 | 遍在蛋白特异性蛋白酶37 |
USP46 | NM_022832 | 遍在蛋白特异性蛋白酶46 |
USP47 | NM_017944 | 遍在蛋白特异性蛋白酶47 |
USP49 | NM_018561 | 遍在蛋白特异性蛋白酶49 |
USP9Y | NM_004654 | 遍在蛋白特异性蛋白酶9,Y连锁的 |
UST | NM_005715 | 糖醛基-2-磺基转移酶 |
UTP14C | NM_021645 | UTP14,U3小的核仁核糖核蛋白, |
UXS1 | NM_025076 | UDP-葡糖醛酸脱羧酶1 |
VANGL1 | NM_138959 | vang样1 |
VAPA | NM_003574 | 小泡相关膜蛋白质-相关 |
VASP | NM_001008736 | 血管舒张剂-刺激的磷蛋白同种型2 |
VAV2 | NM_003371 | vav 2癌基因 |
VAX1 | NM_199131 | 前腹同源框1 |
VCL | NM_003373 | 黏着斑蛋白同种型VCL |
VDAC1 | NM_003374 | 电压依赖性阴离子通道1 |
VEGF | NM_001025366 | 血管内皮生长因子同种型a |
VEZT | NM_017599 | 跨膜蛋白质vezatin |
VGLL2 | NM_153453 | 残翅样2同种型2 |
VGLL3 | NM_016206 | 结肠癌相关蛋白质 |
VGLL4 | NM_014667 | 残翅样4 |
VHL | NM_000551 | von Hippel-Lindau肿瘤抑制物同种型1 |
VLDLR | NM_001018056 | 极低密度脂蛋白质受体同种型b |
VMP | NM_080723 | 小泡膜蛋白质p24 |
VPS13C | NM_017684 | 空泡蛋白质分选13C蛋白质同种型1A |
VPS13D | NM_015378 | 空泡蛋白质分选13D同种型1 |
VPS24 | NM_001005753 | 空泡蛋白质分选24同种型2 |
VPS25 | NM_032353 | 空泡蛋白质分选25 |
VPS26A | NM_004896 | 空泡蛋白质分选26同系物A同种型1 |
VPS36 | NM_016075 | 空泡蛋白质分选36 |
VPS37C | NM_017966 | 空泡蛋白质分选37C |
VPS4B | NM_004869 | 空泡蛋白质分选因子4B |
VRK1 | NM_003384 | 痘苗相关激酶1 |
VSIG1 | NM_182607 | 含V-set和免疫球蛋白结构域1 |
VSX1 | NM_014588 | 视觉系统同源框1蛋白质同种型a |
WAC | NM_016628 | 具卷曲螺旋的含WW结构域衔接蛋白 |
WASF2 | NM_006990 | WAS蛋白质家族,成员2 |
WASF3 | NM_006646 | WAS蛋白质家族,成员3 |
WASL | NM_003941 | Wiskott-Aldrich综合征基因样蛋白质 |
WBSCR1 | NM_022170 | 真核翻译起始因子4H |
WBSCR22 | NM_017528 | Williams Beuren综合征染色体区域22 |
WDFY3 | NM_014991 | WD重复和含FYVE结构域3同种型 |
WDR1 | NM_005112 | 含WD重复蛋白质1同种型2 |
WDR17 | NM_170710 | WD重复结构域17同种型1 |
WDR19 | NM_025132 | WD重复结构域19 |
WDR21C | NM_152418 | 假定蛋白LOC138009 |
WDR23 | NM_025230 | WD重复结构域23同种型1 |
WDR26 | NM_025160 | WD重复结构域26 |
WDR32 | NM_024345 | WD重复结构域32 |
WDR33 | NM_001006623 | WD重复结构域33同种型3 |
WDR35 | NM_001006657 | WD重复结构域35同种型1 |
WDR36 | NM_139281 | WD重复结构域36 |
WDR37 | NM_014023 | WD重复结构域37 |
WDR39 | NM_004804 | WD重复结构域39 |
WDR4 | NM_018669 | WD重复结构域4蛋白质 |
WDR40B | NM_178470 | WD重复结构域40B |
WDR42A | NM_015726 | H326 |
WDR48 | NM_020839 | WD重复结构域48 |
WDR5B | NM_019069 | WD重复结构域5B |
WDR73 | NM_032856 | WD重复结构域73 |
WEE1 | NM_003390 | weel酪氨酸激酶 |
WFS1 | NM_006005 | Wolframin |
WHSC1 | NM_007331 | Wolf-Hirschhorn综合征候选物1蛋白质 |
WIG1 | NM_022470 | p53靶锌指蛋白同种型1 |
WIRE | NM_133264 | WIRE蛋白质 |
WISP2 | NM_003881 | WNT1可诱导的信号转导途径蛋白质2 |
WNK2 | NM_006648 | WNK赖氨酸缺陷型蛋白质激酶2 |
WNK3 | NM_001002838 | WNK赖氨酸缺陷型蛋白质激酶3同种型2 |
WNT5A | NM_003392 | 无翅型MMTV整合位点家族, |
WNT7B | NM_058238 | 无翅型MMTV整合位点家族, |
WSB2 | NM_018639 | WD SOCS-盒蛋白质2 |
WT1 | NM_000378 | Wilms肿瘤1同种型A |
WWP2 | NM_199423 | 含WW结构域的E3遍在蛋白蛋白质连接酶 |
XCL1 | NM_002995 | 趋化因子(C模体)配体1 |
XCL2 | NM_003175 | 趋化因子(C模体)配体2 |
XKR5 | NM_207411 | XK相关蛋白5a |
XKRX | NM_212559 | X Kell血型前体相关,X-连锁 |
XPO5 | NM_020750 | 输出蛋白5 |
XRCC2 | NM_005431 | X射线修复交叉互补蛋白质2 |
XRN1 | NM_019001 | 5′-3′外切核糖核酸酶1 |
XTP7 | NM_138568 | 由乙型肝炎病毒X反式激活的蛋白质7 |
YAF2 | NM_001012424 | YY1相关因子2同种型b |
YARS2 | NM_015936 | 酪氨酰-tRNA合成酶2(线粒体) |
YES1 | NM_005433 | 病毒癌基因yes-1同系物1 |
YIPF5 | NM_001024947 | 平滑肌细胞相关蛋白5 |
YME1L1 | NM_014263 | YME1样1同种型3 |
YOD1 | NM_018566 | 假定蛋白LOC55432 |
YPEL1 | NM_013313 | 开心果样1 |
YPEL2 | NM_001005404 | 开心果样2 |
YPEL4 | NM_145008 | 开心果样4 |
YTHDF3 | NM_152758 | YTH结构域家族,成员3 |
YWHAQ | NM_006826 | 酪氨酸3/色氨酸5-单加氧酶 |
YWHAZ | NM_003406 | 酪氨酸3/色氨酸5-单加氧酶 |
ZADH1 | NM_152444 | 锌结合乙醇脱氢酶,结构域 |
ZADH2 | NM_175907 | 锌结合乙醇脱氢酶,结构域 |
ZAK | NM_133646 | MLK相关激酶同种型2 |
ZBED1 | NM_004729 | Ac样可转座元件 |
ZBP1 | NM_030776 | 肿瘤间质和激活的巨噬细胞蛋白质 |
ZBTB24 | NM_014797 | 含锌指和BTB结构域24 |
ZBTB33 | NM_006777 | Kaiso |
ZBTB39 | NM_014830 | 含锌指和BTB结构域39 |
ZBTB4 | NM_020899 | 含锌指和BTB结构域4 |
ZBTB41 | NM_194314 | 含锌指和BTB结构域41 |
ZBTB5 | NM_014872 | 含锌指和BTB结构域5 |
ZBTB7A | NM_015898 | 含锌指和BTB结构域7A |
ZBTB9 | NM_152735 | 含锌指和BTB结构域9 |
ZC3H12B | NM_001010888 | 假定蛋白LOC340554 |
ZCCHC16 | NM_001004308 | 假定蛋白LOC340595 |
ZDHHC1 | NM_013304 | 锌指,含DHHC结构域1 |
ZDHHC23 | NM_173570 | 锌指,含DHHC结构域23 |
ZDHHC9 | NM_001008222 | 锌指,含DHHC结构域9 |
ZFP106 | NM_022473 | 锌指蛋白106同系物 |
ZFP161 | NM_003409 | 锌指蛋白161同系物 |
ZFP30 | NM_014898 | 锌指蛋白30同系物 |
ZFP42 | NM_174900 | 锌指蛋白42 |
ZFP90 | NM_133458 | 锌指蛋白90同系物 |
ZFP91 | NM_053023 | 锌指蛋白91同种型1 |
ZFP95 | NM_014569 | 锌指蛋白95同系物 |
ZFPM2 | NM_012082 | 锌指蛋白,多向型2 |
ZFYVE20 | NM_022340 | 含FYVE-指Rab5效应蛋白蛋白质 |
ZFYVE21 | NM_024071 | 锌指,含FYVE结构域21 |
ZFYVE26 | NM_015346 | 锌指,含FYVE结构域26 |
ZFYVE9 | NM_004799 | 锌指,含FYVE结构域9同种型3 |
ZHX2 | NM_014943 | 锌指和同源框2 |
ZHX3 | NM_015035 | 锌指和同源框3 |
ZIC1 | NM_003412 | 小脑锌指蛋白1 |
ZIC4 | NM_032153 | 小脑锌指蛋白4 |
ZIM3 | NM_052882 | 锌指,印记的3 |
ZKSCAN1 | NM_003439 | 锌指蛋白36 |
ZMYM6 | NM_007167 | 锌指蛋白258 |
ZNF114 | NM_153608 | 锌指蛋白114 |
ZNF134 | NM_003435 | 锌指蛋白134 |
ZNF136 | NM_003437 | 锌指蛋白136(克隆pHZ-20) |
ZNF137 | NM_003438 | 锌指蛋白137(克隆pHZ-30) |
ZNF14 | NM_021030 | 锌指蛋白14 |
ZNF140 | NM_003440 | 锌指蛋白140(克隆pHZ-39) |
ZNF148 | NM_021964 | 锌指蛋白148(pHZ-52) |
ZNF155 | NM_003445 | 锌指蛋白155 |
ZNF160 | NM_033288 | 锌指蛋白160 |
ZNF161 | NM_007146 | 锌指蛋白161 |
ZNF177 | NM_003451 | 锌指蛋白177 |
ZNF180 | NM_013256 | 锌指蛋白180(HHZ168) |
ZNF187 | NM_001023560 | 锌指蛋白187 |
ZNF192 | NM_006298 | 锌指蛋白192 |
ZNF195 | NM_007152 | 锌指蛋白195 |
ZNF197 | NM_006991 | 锌指蛋白197同种型1 |
ZNF2 | NM_001017396 | 锌指蛋白2同种型b |
ZNF202 | NM_003455 | 锌指蛋白202 |
ZNF213 | NM_004220 | 锌指蛋白213 |
ZNF217 | NM_006526 | 锌指蛋白217 |
ZNF23 | NM_145911 | 锌指蛋白23 |
ZNF236 | NM_007345 | 锌指蛋白236 |
ZNF238 | NM_006352 | 锌指蛋白238同种型2 |
ZNF239 | NM_005674 | 锌指蛋白239 |
ZNF25 | NM_145011 | 锌指蛋白25 |
ZNF264 | NM_003417 | 锌指蛋白264 |
ZNF271 | NM_006629 | 锌指蛋白271 |
ZNF28 | NM_006969 | 锌指蛋白28(KOX24) |
ZNF282 | NM_003575 | 锌指蛋白282 |
ZNF295 | NM_020727 | 锌指蛋白295 |
ZNF304 | NM_020657 | 锌指蛋白304 |
ZNF307 | NM_019110 | 锌指蛋白307 |
ZNF31 | NM_145238 | 锌指蛋白31 |
ZNF320 | NM_207333 | 锌指蛋白320 |
ZNF329 | NM_024620 | 锌指蛋白329 |
ZNF331 | NM_018555 | 锌指蛋白331 |
ZNF333 | NM_032433 | 锌指蛋白333 |
ZNF336 | NM_022482 | 锌指蛋白336 |
ZNF337 | NM_015655 | 锌指蛋白337 |
ZNF33A | NM_006974 | 锌指蛋白33a |
ZNF346 | NM_012279 | 锌指蛋白346 |
ZNF347 | NM_032584 | 锌指蛋白347 |
ZNF367 | NM_153695 | 锌指蛋白367 |
ZNF385 | NM_015481 | 锌指蛋白385 |
ZNF394 | NM_032164 | 锌指蛋白99 |
ZNF398 | NM_020781 | 锌指398同种型b |
ZNF417 | NM_152475 | 锌指蛋白417 |
ZNF43 | NM_003423 | 锌指蛋白43(HTF6) |
ZNF430 | NM_025189 | 锌指蛋白430 |
ZNF431 | NM_133473 | 锌指蛋白431 |
ZNF440 | NM_152357 | 锌指蛋白440 |
ZNF445 | NM_181489 | 锌指蛋白445 |
ZNF452 | NM_052923 | 锌指蛋白452 |
ZNF454 | NM_182594 | 锌指蛋白454 |
ZNF468 | NM_001008801 | 锌指蛋白ZNF468同种型2 |
ZNF473 | NM_001006656 | 锌指蛋白473 |
ZNF482 | NM_006626 | 锌指蛋白482 |
ZNF483 | NM_001007169 | 锌指蛋白483同种型b |
ZNF490 | NM_020714 | 锌指蛋白490 |
ZNF498 | NM_145115 | 锌指蛋白498 |
ZNF500 | NM_021646 | 锌指蛋白500 |
ZNF502 | NM_033210 | 锌指蛋白502 |
ZNF510 | NM_014930 | 锌指蛋白510 |
ZNF512 | NM_032434 | 锌指蛋白512 |
ZNF514 | NM_032788 | 锌指蛋白514 |
ZNF518 | NM_014803 | 锌指蛋白518 |
ZNF526 | NM_133444 | 锌指蛋白526 |
ZNF528 | NM_032423 | 锌指蛋白528 |
ZNF532 | NM_018181 | 锌指蛋白532 |
ZNF536 | NM_014717 | 锌指蛋白536 |
ZNF542 | NM_194319 | 锌指蛋白542 |
ZNF546 | NM_178544 | 锌指蛋白546 |
ZNF549 | NM_153263 | 锌指蛋白549 |
ZNF551 | NM_138347 | 锌指蛋白551 |
ZNF554 | NM_152303 | 锌指蛋白554 |
ZNF556 | NM_024967 | 锌指蛋白556 |
ZNF561 | NM_152289 | 锌指蛋白561 |
ZNF562 | NM_017656 | 锌指蛋白562 |
ZNF565 | NM_152477 | 锌指蛋白565 |
ZNF566 | NM_032838 | 锌指蛋白566 |
ZNF577 | NM_032679 | 锌指蛋白577 |
ZNF585A | NM_152655 | 锌指蛋白585A |
ZNF587 | NM_032828 | 锌指蛋白587 |
ZNF588 | NM_001013746 | 锌指蛋白588 |
ZNF595 | NM_182524 | 锌指蛋白595 |
ZNF597 | NM_152457 | 锌指蛋白597 |
ZNF599 | NM_001007247 | 锌指蛋白599同种型b |
ZNF600 | NM_198457 | 锌指蛋白600 |
ZNF620 | NM_175888 | 锌指蛋白620 |
ZNF621 | NM_198484 | 锌指蛋白621 |
ZNF623 | NM_014789 | 锌指蛋白623 |
ZNF627 | NM_145295 | 锌指蛋白627 |
ZNF651 | NM_145166 | 锌指蛋白651 |
ZNF652 | NM_014897 | 锌指蛋白652 |
ZNF655 | NM_001009956 | 锌指蛋白655同种型e |
ZNF662 | NM_207404 | 锌指蛋白662 |
ZNF665 | NM_024733 | 锌指蛋白665 |
ZNF667 | NM_022103 | 锌指蛋白667 |
ZNF669 | NM_024804 | 锌指蛋白669 |
ZNF671 | NM_024833 | 锌指蛋白671 |
ZNF680 | NM_178558 | 锌指蛋白680 |
ZNF684 | NM_152373 | 锌指蛋白684 |
ZNF69 | NM_021915 | 锌指蛋白69(Cos5) |
ZNF696 | NM_030895 | 锌指蛋白696 |
ZNF70 | NM_021916 | 锌指蛋白70 |
ZNF701 | NM_018260 | 锌指蛋白701 |
ZNF702 | NM_024924 | 锌指蛋白702 |
ZNF704 | NM_001033723 | 锌指蛋白704 |
ZNF708 | NM_021269 | 锌指蛋白15样1(KOX 8) |
ZNF71 | NM_021216 | 锌指蛋白71 |
ZNF721 | NM_133474 | 锌指蛋白721 |
ZNF81 | NM_007137 | 锌指蛋白81(HFZ20) |
ZNFN1A4 | NM_022465 | 锌指蛋白,亚家族1A,4 |
ZNFX1 | NM_021035 | 锌指,含NFX1-类型1 |
ZSWIM3 | NM_080752 | 锌指,含SWIM结构域3 |
ZSWIM4 | NM_023072 | 锌指,含SWIM结构域4 |
ZXDB | NM_007157 | 锌指,X-连锁,复制的B |
ZYG11A | NM_001004339 | 假定蛋白LOC440590 |
ZYG11B | NM_024646 | 假定蛋白LOC79699 |
ZZEF1 | NM_015113 | 锌指,具EF手型结构域ZZ类型1 |
ZZZ3 | NM_015534 | 锌指,含ZZ结构域3 |
表4.在转染pre-miR hsa-miR-20a的人癌细胞中表现出mRNA表达水平改变的hsa-miR-20a靶
基因符号 | RefSeq转录物ID(Pruitt等,2005) | 描述 |
ABCA1 | NM_005502 | ATP-结合盒,亚家族A成员1 |
ANTXR1 | NM_018153 | 肿瘤内皮标志物8同种型3前体 |
ARTS-1 | NM_016442 | 脱落的1型肿瘤坏死因子受体 |
ATP6V0E | NM_003945 | ATP酶,H+转运,溶酶体,V0亚基 |
ATP9A | NM_006045 | ATP酶,类II,类型9A |
BICD2 | NM_001003800 | 二尾D同系物2同种型1 |
BTG3 | NM_006806 | B细胞易位基因3 |
BTN3A2 | NM_007047 | 嗜乳脂蛋白,亚家族3,成员A2前体 |
C19orf2 | NM_003796 | RPB5-介导蛋白质同种型a |
C21orf25 | NM_199050 | 假定蛋白LOC25966 |
C6orf120 | NM_001029863 | 假定蛋白LOC387263 |
CCND1 | NM_053056 | 细胞周期蛋白D1 |
CDC37L1 | NM_017913 | 细胞分裂周期37同系物(S |
CLIC4 | NM_013943 | 氯化物细胞内通道4 |
COL4A1 | NM_001845 | α1类型IV胶原前蛋白原 |
COL4A2 | NM_001846 | α2类型IV胶原前蛋白原 |
CPM | NM_001005502 | 羧基肽酶M前体 |
CRIPT | NM_014171 | 突触后蛋白质CRIPT |
CXCL5 | NM_002994 | 趋化因子(C-X-C模体)配体5前体 |
DAZAP2 | NM_014764 | DAZ相关蛋白2 |
DCBLD2 | NM_080927 | 网柄菌素,含CUB和LCCL结构域2 |
DDAH1 | NM_012137 | 二甲基精氨酸二甲氨基水解酶1 |
DNAJB6 | NM_005494 | DnaJ(Hsp40)同系物,亚家族B,成员6 |
DNAJC15 | NM_013238 | 含DNAJ结构域 |
EIF2C1 | NM_012199 | 真核翻译起始因子2C,1 |
EIF2S1 | NM_004094 | 真核翻译起始因子2, |
EREG | NM_001432 | 表皮调节素前体 |
F2RL1 | NM_005242 | 凝血因子II(凝血酶)受体样1 |
FAM18B | NM_016078 | 假定蛋白LOC51030 |
FJX1 | NM_014344 | 四连接盒1 |
FLJ31568 | NM_152509 | 假定蛋白LOC150244 |
FTS | NM_001012398 | 融合的toes同系物 |
FYCO1 | NM_024513 | 含FYVE和卷曲螺旋结构域1 |
FZD7 | NM_003507 | frizzled 7 |
GATA6 | NM_005257 | GATA结合蛋白6 |
GNS | NM_002076 | 葡糖胺(N-乙酰)-6-硫酸酯酶前体 |
GOLPH2 | NM_016548 | 高尔基体磷蛋白2 |
HCCS | NM_005333 | 全细胞色素c合酶(细胞色素c |
HIC2 | NM_015094 | 癌症中高甲基化2 |
HMGA2 | NM_001015886 | 高移动族AT钩2同种型c |
HN1 | NM_001002032 | 血液和神经表达1 |
IL11 | NM_000641 | 白细胞介素11前体 |
IL8 | NM_000584 | 白细胞介素8前体 |
KCNMA1 | NM_001014797 | 大电导钙激活钾 |
KIAA0494 | NM_014774 | 假定蛋白LOC9813 |
KLF10 | NM_001032282 | Kruppel样因子10同种型b |
LEPROT | NM_017526 | 瘦蛋白受体基因相关蛋白质 |
LHFP | NM_005780 | 脂肪瘤HMGIC融合伴侣 |
LIMK1 | NM_002314 | LIM结构域激酶1同种型1 |
LRRC54 | NM_015516 | Tsukushi |
M6PR | NM_002355 | 阳离子依赖性甘露糖-6-磷酸受体 |
MAP3K2 | NM_006609 | 促分裂原活化蛋白质激酶激酶激酶 |
MGC11332 | NM_032718 | 假定蛋白LOC84804 |
MICA | NM_000247 | MHC I类链相关基因A蛋白质 |
NAGK | NM_017567 | N-乙酰葡糖胺激酶 |
NPAS2 | NM_002518 | 神经元PAS结构域蛋白质2 |
NPTX1 | NM_002522 | 神经元五聚环蛋白I前体 |
NRP2 | NM_018534 | 神经毡蛋白2同种型4前体 |
NUPL1 | NM_001008564 | 核孔蛋白样1同种型b |
OSTM1 | NM_014028 | 骨硬化病相关的跨膜蛋白质 |
PDCD4 | NM_014456 | 程序性细胞死亡4同种型1 |
PELI2 | NM_021255 | pellino 2 |
PFKP | NM_002627 | 磷酸果糖激酶,血小板 |
PLAU | NM_002658 | 尿激酶纤维蛋白溶酶原激活物前蛋白原 |
PLCB1 | NM_015192 | 磷酸肌醇-特异性磷脂酶Cβ1 |
PON2 | NM_000305 | 对氧磷酶2同种型1 |
PTHLH | NM_198965 | 甲状旁腺激素样激素同种型1 |
QKI | NM_206853 | quaking同系物,KH结构域RNA结合同种型 |
RAB22A | NM_020673 | RAS相关蛋白RAB-22A |
RHOC | NM_175744 | ras同系物基因家族,成员C |
RNH1 | NM_002939 | 核糖核酸酶/血管生成素抑制剂 |
RRM2 | NM_001034 | 核糖核苷酸还原酶M2多肽 |
SERPINE1 | NM_000602 | 纤溶酶原激活物抑制剂-1 |
SESN1 | NM_014454 | sestrin 1 |
SGPL1 | NM_003901 | 鞘氨醇-1-磷酸裂合酶1 |
SLC1A4 | NM_003038 | 溶质运载体家族1,成员4 |
SLC2A3 | NM_006931 | 溶质运载体家族2(易化葡萄糖 |
SNAP23 | NM_003825 | 突触小体相关蛋白23同种型 |
SPARC | NM_003118 | 分泌的蛋白质,酸性,半胱氨酸丰富 |
SPFH2 | NM_007175 | SPFH结构域家族,成员2同种型1 |
STC1 | NM_003155 | 司腺钙蛋白1前体 |
SYNE1 | NM_015293 | nesprin 1同种型β |
TBC1D2 | NM_018421 | TBC1结构域家族,成员2 |
TGFBR2 | NM_001024847 | TGF-β类型II受体同种型A前体 |
TNFRSF10B | NM_003842 | 肿瘤坏死因子受体超家族, |
TXLNA | NM_175852 | 滑行蛋白 |
UEV3 | NM_018314 | 遍在蛋白缀合酶E2样 |
USP46 | NM_022832 | 遍在蛋白特异性蛋白酶46 |
VANGL1 | NM_138959 | vang样1 |
VLDLR | NM_001018056 | 极低密度脂蛋白质受体同种型b |
WNT5A | NM_003392 | 无翅型MMTV整合位点家族, |
ZNF331 | NM_018555 | 锌指蛋白331 |
本发明某些实施方案包括通过扩增分析、杂交分析或蛋白质分析确定一个或一个以上标记、基因或代表一个或一个以上基因的核酸片段的表达,上述种种方法为本领域普通技术人员众所周知。在某些方面,扩增分析可以是定量扩增分析,例如定量RT-PCR等。在仍进一步的方面中,杂交分析可以包括阵列杂交分析或溶液杂交分析。来自样品的核酸可以从样品中标记和/或将标记核酸与一个或一个以上核酸探针杂交。核酸、mRNA和/或核酸探针可以偶联至支持物。此类支持物是本领域普通技术人员众所周知的并且包括,但不限于玻璃、塑料、金属或乳胶。在本发明的特定方面,支持物可以是平面的或者是珠的形式或者本领域已知的其他几何形状或构型。蛋白质通常通过免疫印迹、层析或质谱分析法或本领域普通技术人员已知的其他方法分析。
本发明还涉及包含本发明组合物或者借以实现本发明方法的组合物的试剂盒。在一些实施方案中,试剂盒可以用于评估一个或一个以上标记分子和/或表达一个或一个以上miRNA。在某些实施方案中,试剂盒包含、至少包含或至多包含1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、100、150、200或更多个与待评估标记相关的探针、重组核酸或合成核酸分子或者待表达或调节的miRNA,并且可以包括从它们导出的任何范围或组合。试剂盒可以包含可以单独包装的或者置于一个容器,例如管、瓶、小瓶、注射器或其他适宜容器装置内的成分。单独成分还可以浓缩量形式在试剂盒中提供;在一些实施方案中,成分以与它在含其他成分的溶液中的浓度相同的浓度单独提供。成分的浓度可以以1×、2×、5×、10×、20×或更高倍数提供。可以作为本发明的部分包含使用本发明探针、合成核酸、重组核酸或非合成核酸开展治疗应用、预后应用或诊断应用的试剂盒。特别考虑的是对应于据报导影响本文所述一个或一个以上标志基因或基因途径的生物学活性或表达的任何miRNA的任何此类分子。在某些方面,阴性和/或阳性对照包括在一些试剂盒实施方案中。对照分子可以用于证实转染效率和/或对细胞中转染诱导变化的控制。
某些实施方案涉及用于通过样品核酸谱分析评估患者病理状况或者发展成病理状况危险的试剂盒,包含在适宜容器装置中的两种或者两种以上核酸杂交或扩增试剂。试剂盒可以包含用于标记样品中核酸的试剂和/或核酸杂交试剂。杂交试剂有代表性地包含杂交探针。扩增试剂包括,但不限于扩增引物、试剂和酶。
在本发明的一些实施方案中,表达谱通过包括下列的步骤产生:(a)标记样品中的核酸;(b)将核酸与诸多探针杂交或扩增诸多核酸,和(c)确定和/或定量与探针杂交的核酸或者探测和定量表达谱产生的扩增产物。见美国临时专利申请60/575,743和美国临时专利申请60/649,584和美国专利申请序列号11/141,707和美国专利申请序列号11/273,640,所有这些专利申请通过参考并入本文。
本发明方法包括基于miRNA和/或标记核酸表达谱诊断和/或评估患者预后。在某些实施方案中,细胞中特定基因或遗传途径或核酸组表达水平较之正常或非病理细胞或组织样品中它们的表达水平提高或降低与疾病状态或病理状况关联。在测量被评估生物学样品中一个或一个以上核酸表达水平并与正常或者非病理细胞或组织样品中的表达水平相比较时,该关联使得可以开展诊断和/或预后方法。特别考虑的是,患者特别是怀疑患有或倾向具有特定疾病或状况例如癌症的那些患者的表达谱可以通过评估本申请所述任何的或多组的miRNA和/或核酸产生。从患者产生的表达谱将是提供关于特定疾病或状况信息的表达谱。在许多实施方案中,使用核酸杂交或扩增(例如阵列杂交或RT-PCR)产生表达谱。在某些方面,表达谱可以与其他诊断和/或预后试验,例如组织学、血清中蛋白质谱和/或细胞遗传评估联合使用。
方法可以进一步地包括一个或一个以上步骤,包括:(a)从患者得到样品,(b)从样品分离核酸,(c)标记从样品分离的核酸,和(d)将标记的核酸与一个或一个以上探针杂交。本发明核酸包括一个或一个以上核酸,所述核酸包含至少一个具有表1、3、4和/或5中一个或一个以上基因或标记所代表核酸序列或互补序列的片段。
可以预期到的是,本文所述的任何方法或组合物可以使用本文所述的任何其他方法或组合物实现,并且不同的实施方案可以组合。特别考虑的是,本文所述的对于miRNA分子、miRNA、基因和代表基因的核酸的任何方法和组合物可以使用合成核酸实现。在一些实施方案中,合成核酸处于适当条件下,以便使其变成加工的或者成熟的核酸,例如生理条件下的miRNA。最初提交的权利要求考虑涵盖多次从属于任何所提交权利要求或所提交权利要求组合的权利要求。
同样,涉及特异基因(包括其代表性片段)、mRNA或名称叫作miRNA的本发明的任何实施方案还考虑涵盖涉及其序列与特定miRNA的成熟序列具有至少80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99%同源性的miRNA的实施方案。
应当进一步理解,除非另外指出,采用缩写符号时,对基因或其标记或miRNA的一般描述指任何其基因家族成员(通过数字区分)或其代表性片段。本领域技术人员应理解,“基因家族”指具有相同编码序列或miRNA编码序列的一组基因。有代表性地,miRNA基因家族的成员通过最初指定名后的数字鉴别。例如,miR-16-1和miR-16-2是miR-16基因家族成员,“mir-7”指miR-7-1、miR-7-2和miR-7-3。此外,除非另外指出,缩写符号指相关miRNA(通过字母区分)。该缩写符号的例外将另外鉴别。
在本申请的各处讨论本发明的另外实施方案。对于本发明的一个方面所讨论的任何实施方案也适用于本发明的其他方面并且反之亦然。实施例和详述部分中的实施方案理解为可适用于本发明所有方面的本发明实施方案。
术语“抑制”、“降低”或“预防”或者这些术语的任何变化形式,当用于权利要求书和/或说明书中时包括达到期望结果的任何可测量的降低或完全抑制。
当词“一”或“一”在权利要求书和/或说明书中与术语“包含”联合使用时,可能意思是“一个”,但其还有“一个或多个”、“至少一个”和“一个或一个以上”的意思。
在该申请的通篇中,术语“大约”用于指数值包括对于用来确定数值的设备或方法的误差标准差。
虽然此公开支持术语“或者”指仅备选物和“和/或”,但是在权利要求书中术语“或者”用于指“和/或”,除非明确指出是指仅备选物或者备选物相互排斥。
如在该说明书和权利要求书中所使用,词“包含”(和包含的任何形式,例如“包含”和“包含”)、“具有”(和具有的任何形式,例如“具有”和“具有”)、“包括”(和包括的任何形式,例如“包括”和“包括”)或者“含有”(和含有的任何形式,例如“含有”和“含有”)是包含性的或者开放性的,并且不排除额外的、非描述的元件或方法步骤。
本发明的其他目的、特征和优点在详细描述之后会变得明显。然而,应当理解的是,详细描述和特定实施例仅以例证的方式给出以显示本发明特定实施方案,因为从该详细描述可以看出,处于本发明精神和范围内的多种改变和修饰对本领域技术人员是显而易见的。
具体实施方式
本发明涉及组合物和方法,所述组合物和方法通过所鉴定基因的表达显示,以鉴定和表征基因和与这些基因相关的生物学途径,,并且涉及使用与此相关的miRNA,以用于治疗、预后和诊断应用的用途,特别是与评估和/或鉴定miR-20a表达或其异常表达直接或间接相关的病理状况相关的那些方法和组合物。
在某些方面,本发明涉及用于对细胞或受试者评估、分析和/或治疗的方法,在所述的细胞或受试者中,因为任何一个或者组合的miR-20家族成员表达增加或降低,使得某些基因表达降低或增加(相对于正常)。在某些情况下,针对miR-20表达或抑制的表达谱和/或反应可以指示疾病或病理状况,例如癌症。
表征任何一个或组合的所列miRNA或所列标记(包括其代表性核酸)的预后分析可以用于患者评估中,以确定如果有治疗方案的话,什么治疗方案是对的。与上述的诊断分析一样,限定低表达的绝对值会依赖于用于测量miRNA的平台。对于诊断分析所描述的方法同样可用于预后分析。
I.治疗方法
本发明实施方案涉及当导入细胞内后执行内源miRNA活性或者抑制内源miRNA的核酸。在某些方面,核酸是合成的或非合成的miRNA。序列特异性的miRNA抑制剂可以用于连续性或组合抑制细胞内一个或一个以上内源miRNA活性,以及受内源miRNA调节的那些基因和相关途径的活性。
本发明在一些实施方案中涉及在细胞中作为miRNA或者miRNA抑制剂起作用的短核酸分子。术语“短”指15、16、17、18、19、20、21、22、23、24、25、50、100、150个核苷酸或更少的单一多核苷酸长度,包括可从它们当中导出的所有整数或范围。核酸分子有代表性地是合成的。术语“合成的”指非细胞内天然产生的核酸分子。在某些方面,化学结构偏离天然存在的核酸分子,例如内源前体miRNA或miRNA分子。然而在一些实施方案中,本发明核酸不具有与天然存在核酸序列相同的全部序列,此类分子可以包含全部或部分的天然存在序列。然而,可以预期到的是施用至细胞的合成的核酸可以随后在细胞内被修饰或改变,以致于其结构或序列与非合成的或天然存在的核酸,例如成熟miRNA序列相同。例如,合成的核酸可以具有与前体miRNA序列不同的序列,但是该序列一旦进入细胞可以被改变成与内源性的、加工了的miRNA相同的序列。术语“分离的”意思是指,本发明核酸分子最初从不同的(依据序列或结构)和不需要的核酸分子分离而来,以致于所分离核酸的群体就其他多核苷酸分子而言是至少大约90%同源的,并且可以是至少大约95、96、97、98、99或100%同源的。在许多本发明实施方案中,核酸是分离的,因为它已经被体外合成,与细胞内源核酸分离开来。然而,应当理解的是,分离的核酸可以随后混合或集合在一起。在某些方面,本发明的合成miRNA是RNA或RNA类似物。miRNA抑制剂可以是DNA或RNA或其类似物。本发明的miRNA和miRNA抑制剂总称为“合成核酸”。
在一些实施方案中,存在具有17和130个残基长度的miRNA或合成的miRNA。本发明的miRNA或合成的miRNA长度是、至少或者至多15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99、100、101、102、103、104、105、106、107、108、109、110、111、112、113、114、115、116、117、118、119、120、121、122、123、124、125、126、127、128、129、130、140、145、150、160、170、180、190、200或更多个残基的miRNA或合成miRNA分子,包括它们之间的任何整数或范围。
在某些实施方案中,合成miRNA具有(a)“miRNA区域”,其序列或结合区从5’至3’与全部或部分成熟miRNA序列相同,和(b)“互补区域”,其序列从5’至3’与miRNA序列具有60%和100%之间的互补性。在某些实施方案中,这些合成miRNA也是分离的,如上面所定义。术语“miRNA区域”指合成miRNA上与成熟的天然存在miRNA序列的全部序列具有至少75、80、85、90、95或100%包括它们之间的全部整数同源性的区域。在某些实施方案中,miRNA区域与天然存在miRNA的序列具有或具有至少90、91、92、93、94、95、96、97、98、99、99.1、99.2、99.3、99.4、99.5、99.6、99.7、99.8、99.9或100%同源性。
术语“互补区域”指与成熟的天然存在miRNA序列具有或具有至少60%互补性的合成miRNA的区域。互补区域具有或具有至少60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99、99.1、99.2、99.3、99.4、99.5、99.6、99.7、99.8、99.9或100%互补性或者从其中可导出的任何范围。在单个多核苷酸序列内,可以具有发夹环结构,这是miRNA区域和互补区域之间化学键合的结果。在其他实施方案中,互补区域在与miRNA区域不同的核酸分子上,在该情况下,互补区域在互补链上而miRNA区域在活性链上。
在本发明另外的实施方案中,存在为miRNA抑制剂的合成核酸。miRNA抑制剂长度在大约17至25个核苷酸之间,并且包含与成熟miRNA的5’至3’序列具有至少90%互补性的5’至3’序列。在某些实施方案中,miRNA抑制剂分子长度是17、18、19、20、21、22、23、24或25个核苷酸或者可从它们导出的任何范围。然而,miRNA抑制剂可以具有与成熟miRNA、特别是成熟的天然存在miRNA的5’至3’序列具有或具有至少70、75、80、85、90、91、92、93、94、95、96、97、98、99、99.1、99.2、99.3、99.4、99.5、99.6、99.7、99.8、99.9或100%或可从其导出的任何范围的互补性的序列(从5’至3’)。本领域技术人员可以使用与成熟miRNA序列互补的部分miRNA序列作为miRNA抑制剂序列。然而,该部分核酸序列可以被改变,以致于其与成熟miRNA序列仍然具有适当百分数的互补性。
在本发明的一些实施方案中,合成的miRNA包含一个或一个以上设计元件。这些设计元件包括,但不限于:(i)对于互补区域5’末端核苷酸的磷酸或羟基的取代基;(ii)互补区域开始或最后1-6个残基中一个或一个以上糖修饰;或(iii)互补区域3’端最后1-5个残基内的一个或一个以上核苷酸与miRNA区域相应核苷酸的非互补性。多种设计修饰是本领域众所周知的,见下文。
在某些实施方案中,合成的miRNA在其互补区域5’端具有其磷酸和/或羟基已经被另一化学基取代的核苷酸(被称为“取代设计”)。在一些情况下,磷酸基被取代,而在另外一些情况下,羟基已经被取代。虽然其他取代基为本领域技术人员众所周知并且同样可以使用,但是在特定实施方案中,取代基是生物素、胺基、低碳烷基胺基、乙酰基、2’O-Me(2’氧-甲基)、DMTO(带氧的4,4’-二甲氧基三苯甲基)、荧光素、巯基或吖啶。该设计元件还可以在miRNA抑制剂中使用。
另外的实施方案涉及在互补区域开始或最后1-6个残基中具有一个或一个以上糖修饰的合成miRNA(被称为“糖取代设计”)。在某些情况下,在互补区域的开始1、2、3、4、5、6或更多个残基或可从其中导出的任何范围的残基中存在一个或一个以上糖修饰。在另外的情况下,在互补区域的最后1、2、3、4、5、6或更多个残基或可从其中导出的任何范围残基内存在一个或一个以上糖修饰。应当理解的是,术语“开始”和“最后”是对于区域的从5’端至3’端的残基次序而言的。在特定实施方案中,糖修饰是2’O-Me修饰。在进一步的实施方案中,在互补区域的开始或最后2-4个残基内或者互补区域的开始或最后4-6个残基内存在一个或一个以上糖修饰。该设计元件还可以在miRNA抑制剂中使用。因此,miRNA抑制剂可以在5’末端核苷酸上具有该设计元件和/或取代基。
本发明另外的实施方案,存在其中互补区域3’端最后1-5个残基中一个或一个以上核苷酸与miRNA区域相应核苷酸不互补的合成miRNA(“非互补性”)(被称为“非互补性设计”)。非互补性可以存在于互补miRNA的最后1、2、3、4和/或5个残基中。在某些实施方案中,在互补区域的至少2个核苷酸内存在非互补性。
可以预期到的是本发明的合成miRNA具有一个或一个以上取代、糖修饰或非互补性设计。在某些情况下,合成RNA分子具有它们当中的两种,而在另外一些情况下,这些分子在适当位置具有全部三种设计。
miRNA区域和互补区域可以在同一或者分开的多核苷酸上。在miRNA区域和互补区域包含在同一多核苷酸之上或之内的情况下,miRNA分子将考虑为单一多核苷酸。在不同的区域位于分开的多核苷酸之上的实施方案中,合成miRNA将考虑包含在两个多核苷酸内。
当RNA分子为单一多核苷酸时,在miRNA区域和互补区域之间可存在接头区。在一些实施方案中,单一多核苷酸是能够形成发夹环结构,这是miRNA区域和互补区域结合的结果。接头构成了发夹环。在一些实施方案中,可以预期到的是接头区长度为、为至少或为至多2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39或40个残基或者可从其中导出的任何范围。在某些实施方案中,接头长度为3和30个残基(包含在内)之间。
除了具有miRNA区和互补区域之外,还可以在区域的5’端或3’端具有侧翼序列。在一些实施方案中,在这些区域的一侧或两侧存在或存在至少1、2、3、4、5、6、7、8、9、10个核苷酸或更多个核苷酸,或者可从其中导出的任何范围。
本发明方法包括降低或消除细胞内一个或一个以上miRNA活性,包括向细胞内引入miRNA抑制剂;或者提供或增强细胞内一个或一个以上miRNA活性。本发明还涉及通过向细胞特定核酸,例如特异性合成miRNA分子或合成miRNA抑制剂分子诱导某些细胞特性。然而,在本发明方法中,miRNA分子或miRNA抑制剂不必须是合成的。它们可以具有与天然存在miRNA具有相同的序列或者它们可以不具有任何设计修饰。在某些实施方案中,miRNA分子和/或miRNA抑制剂是合成的,如上所述。
向细胞提供的特定核酸分子理解为对应于细胞内的特定miRNA,因此细胞内的miRNA被称为“对应miRNA”。在指定miRNA分子引入细胞内的情况下,对应miRNA将被理解为被诱导或抑制的miRNA或者miRNA功能。然而,可以预期到的是被引入细胞内的miRNA分子不是成熟miRNA,而是能够在适当生理条件下变成成熟miRNA。在特定的对应miRNA被miRNA抑制剂抑制的情况下,特定miRNA将被称为靶向的miRNA。可以预期到的是可以涉及多个对应miRNA。在特定实施方案中,一种以上miRNA分子被引入细胞内。然而,在其他实施方案中,一种以上miRNA抑制剂被引入细胞内。此外,miRNA分子和miRNA抑制剂的组合可以被引入细胞内。发明人可以预期到的是,miRNA组合可以在异常表型细胞内细胞途径中一个或一个以上点处起作用,并且此种组合对靶细胞的功效增加,而与此同时对正常细胞没有不利影响。因此,miRNA组合可以对受试者或者患者具有最低限度的不利影响,而同时提供充足的治疗作用,例如状况改善、细胞的生长抑制、所靶向细胞的死亡、细胞表型或生理学改变、细胞生长放缓、对第二治疗法的敏化、对特定治疗法的敏化等等。
方法包括鉴定需要诱导这些细胞特性的细胞或患者。同样,应当理解的是,向细胞或有机体提供的合成核酸量是“有效量”,其指达到期望的目标,诸如诱导特定细胞特性所需要的量(或足够量)。在方法的某些实施方案中包括向细胞提供或引入有效达到期望的生理学结果数量的对应于细胞内miRNA的核酸分子。
此外,方法可以包括提供合成或非合成miRNA分子。在这些实施方案中可以预期到的是,方法可限于或可不限于提供仅仅一个或一个以上合成miRNA分子或者仅仅一个或一个以上非合成miRNA分子。因此,在某些实施方案中,方法可以涉及提供合成miRNA分子和非合成miRNA分子。在该情况下,最有可能向一个细胞或多个细胞提供对应于特定miRNA的合成miRNA分子和对应于不同miRNA的非合成miRNA分子。此外,使用一列miRNA用马库什组语言限定的任何方法可以不用马库什组语言而用分离性的词(即,或者)限定,反之亦然。
有代表性地,细胞内的内源基因、miRNA或mRNA被调节。在特定实施方案中,核酸序列包含至少一个在核酸序列上与一个或一个以上miRNA或基因序列具有至少70、75、80、85、90、95或100%同一性的片段。内源基因、miRNA或mRNA的表达或加工的调节可以贯穿于mRNA加工的调节中,此类加工包括细胞内的转录、转运和/或翻译。调节还可以通过细胞、组织或器官内miRNA活性的抑制或增强而实现。此类加工可影响所编码产物的表达或者mRNA的稳定性。仍然在其他实施方案中,核酸序列可包含修饰核酸序列。在某些方面,一个或一个以上miRNA序列可包括或包含修饰核碱基或核酸序列。
应当理解,在本发明方法中,可通过向细胞或有机体施用其一旦进入细胞即充当对应miRNA的核酸分子,向细胞或其他生物物质例如有机体(包括患者)提供对应于特定miRNA的miRNA或miRNA分子。向细胞提供的分子的形式可以不是一旦进入细胞即充当miRNA的形式。因此,在一些实施方案中可以预期到的是提供合成miRNA或非合成miRNA,以致于其一旦进入细胞的miRNA加工机构即被加工成成熟的和活化的miRNA。在某些实施方案中,特别考虑的是,提供的miRNA分子不是成熟miRNA分子,而是其一旦进入miRNA加工机构即被加工成成熟miRNA的核酸分子。miRNA背景下的术语“非合成”意思是指miRNA不是“合成的”,如本文所定义。此外,可以预期到的是在涉及使用合成miRNA的本发明实施方案中,在本发明的一个方面也考虑使用相应的非合成,反之亦然。应当理解的是,术语“提供”试剂用于包括向患者“施用”试剂。
在某些实施方案中,方法还包括靶向miRNA以在细胞或有机体内调节。术语“靶向miRNA以调节”意思是指将采用本发明核酸以调节所选择的miRNA。在一些实施方案中,调节用对应于所靶向miRNA的合成或非合成miRNA实现,其有效地向细胞或有机体提供所靶向的miRNA(正向调节)。在其他实施方案中,调节用miRNA抑制剂实现,其有效地抑制细胞或有机体中的所靶向的miRNA(负向调节)。
在一些实施方案中,被靶向调节的miRNA是影响疾病、状况或途径的miRNA。在某些实施方案中,miRNA被靶向,因为治疗可以通过负向调节所靶向miRNA而提供。在其他实施方案中,miRNA被靶向,因为治疗可以通过正向调节所靶向miRNA或其靶标而提供。
在本发明的某些方法中,存在向需要与靶向miRNA调节相关的治疗的或需要本文所述生理学或生物学结果(例如对于特定细胞途径或结果,如细胞活力下降)的细胞、组织、器官或有机体(总称为“生物物质”)施用所选择的miRNA调节剂的更多步骤。因此,在本发明的一些方法中,存在鉴定需要通过提供miRNA调节剂治疗的患者的步骤。可以预期到的是,在一些实施方案中施用有效量的miRNA调节剂。在特定实施方案中,赋予生物物质治疗益处,其中“治疗益处”指一种或一种以上状况或与疾病或状况相关症状的改善,或者就疾病而言预后、持续时间或状况的改善。可以预期到的是治疗益处包括,但不限于疼痛降低、发病率降低和/或症状减少。例如,就癌症而言,可以预期到的是治疗益处可以是肿瘤生长的抑制、转移的阻止、转移灶数量的减少、癌细胞增殖的抑制、癌细胞中细胞死亡的诱导、癌细胞附近血管发生的抑制、癌细胞细胞凋亡的诱导、疼痛的减轻、复发危险的降低、癌细胞中化学敏感性或辐射敏感性的诱导、生命的延长和/或癌症直接或间接相关的死亡的延迟。
此外,可以预期到的是,miRNA组合物可以作为治疗的一部分与传统治疗法或预防试剂联合向患者提供。此外,可以预期到的是在治疗背景下讨论的任何方法,可以预防性地特别应用于经鉴定潜在需要治疗或者处于需要治疗的状况或疾病风险之中的患者。
此外,本发明方法涉及使用一种或一种以上对应于miRNA的核酸和治疗药物。核酸可以增强药物的作用或疗效、降低任何副作用或毒性、改变其生物利用率和/或降低所需要的剂量或频率。在某些实施方案中,治疗药物是癌症治疗剂。因此,在一些实施方案中,存在治疗患者中癌症的方法,包括向患者施用癌症治疗剂和有效量的至少一种改善癌症治疗剂疗效或保护非癌细胞的miRNA分子。癌症治疗法还包括与基于化学和辐射的治疗的多种联合治疗。联合化学治疗包括但不限于,例如,5-氟尿嘧啶、阿仑单抗、氨柔比星、贝伐单抗、博来霉素、硼替佐米、白消安、喜树碱、卡培他滨、碳铂、西妥昔单抗、苯丁酸氮芥、顺铂(CDDP)、COX-2抑制剂(例如塞来昔布)、环磷酰胺、阿糖胞苷、更生霉素、达沙替尼、柔红霉素、地塞米松、多西他塞、阿霉素(亚德里亚霉素)、EGFR抑制剂(吉非替尼和西妥昔单抗)、埃罗替尼、雌激素受体结合剂、依托泊苷(VP16)、依维莫司、法呢基-蛋白质转移酶抑制剂、吉非替尼、吉西他滨、吉妥单抗、替伊莫单抗、异环磷酰胺、甲磺酸伊马替尼、larotaxel、拉帕替尼、洛那法尼、氮芥、美法仑、甲氨蝶呤、丝裂霉素、诺维本、亚硝基脲、洛可达唑、草酸铂、紫杉醇、plicomycin、丙卡巴肼、雷洛昔芬、利妥昔单抗、西罗莫司、索拉非尼、舒尼替尼、他莫昔芬、红豆杉醇、多西他赛、西罗莫司脂化物、替吡法尼、托西莫单抗、transplatinum、曲妥珠单抗、长春碱、长春新碱、或长春瑞滨或者上述药物的任何类似物或衍生变体。
通常,可给与miRNA抑制剂以降低内源miRNA的活性。例如,增加细胞增殖的miRNA分子的抑制剂可以向细胞提供以降低细胞增殖。本发明可以预期到的是针对本文所公开的不同miRNA分子和miRNA抑制剂观察到不同生理效应的这些实施方案。这包括,但不限于下列生理效应:增加和降低细胞增殖、增加或降低细胞凋亡、增加转化、增加或降低细胞活力、激活或抑制激酶(例如Erk)、激活/诱导或抑制hTert、抑制促进生长途径(例如Stat 3信号途径)的兴奋、减少或增加活细胞数、和增加或降低细胞周期中特定期细胞数。本发明方法一般考虑包括提供或引入对应于一种或一种以上不同miRNA分子的一种或一种以上不同核酸分子。可以预期到的是下列数量、至少下列数量或至多下列数量的不同核酸或miRNA分子可以被提供或引入:1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99、100或从其中导出的任何范围。这也适用于可以提供或引入细胞内的不同miRNA分子的数量。
II.药物制剂和递送
本发明方法包括递送有效量的miRNA或编码其的表达构建体。“有效量”药物组合物通常定义为足以可检测地和可重复地达到所述期望的结果,例如改善、降低、最小化或限制疾病或其症状程度的数量。可采用其他更严格的定义,包括消除、消灭或治愈疾病。
A.施用
在某些实施方案中,期望杀死细胞、抑制细胞生长、抑制转移、降低肿瘤或组织大小和/或逆转或降低细胞的恶性或疾病表型。施用途径自然地随着待靶向的病变或部位的位置和性质而变化,并且包括例如真皮内、皮下、区域、肠胃外、静脉内、肌内、鼻内、全身和口服施用和制剂。直接注射、瘤内注射或肿瘤脉管系统内注射特别考虑用于分散的、实体的、可接近的肿瘤或其他可接近的靶区域。局部、区域或全身施用也是适当的。对于>4cm的肿瘤,待施用的体积将会是大约4-10ml(优选10ml),而对于<4cm的肿瘤,将使用大约1-3ml的体节(优选3ml)。
作为单次剂量递送的多次注射包含大约0.1至大约0.5ml的体积。本发明组合物可以在多次注射中施用至肿瘤所所靶向部位。在某些方面,注射可以以大约1cm的间隔间隔开。
在手术介入的情况下,本发明可在手术前使用,以使得不宜手术的肿瘤受试者能够行切除术。备选地,本发明可以在手术的同时使用,和/或手术之后使用以治疗残留的或转移的疾病。例如,可向将切除的瘤床注射或者灌注包含miRNA或其组合的制剂。在切除术后可连续施用,例如通过在手术部位植入导管。还构想了定期术后治疗。还考虑连续灌注表达构建体或病毒构建体。
在适当的地方也可以采用连续施用,例如,当肿瘤或其他不希望的受累区域被切除和瘤床或靶向部位被处理以消除残留的微小疾病(microscopic disease)时。考虑通过注射器或导管递送。此类连续灌注可在最初治疗之后持续从大约1-2小时至大约2-6小时、至大约6-12小时、至大约12-24小时、至大约1-2天、至大约1-2周或者更长时间。通常,通过连续灌注的治疗组合物的剂量等同于随着灌注持续阶段调整的单次或多次注射的剂量。
治疗方案同样也可变化,并且常常依赖于肿瘤类型、肿瘤部位、免疫状况、靶位点、疾病进程和患者的健康和年龄。某些肿瘤类型将需要更积极治疗。临床医生将最适合基于治疗制剂的已知疗效和毒性(如果存在的话)做出此类决定。
在某些实施方案中,被治疗的肿瘤或患病区域可能是,至少最初是不可切除的。用本发明组合物治疗可以因为边界收缩或者消除了某些特别的侵袭部分而增加肿瘤的可切除性。在治疗后,行切除术是可能的。在切除术后的额外的治疗可用作消除肿瘤或靶向部位的微小残留疾病。
治疗可以包括多种“单位剂量”。单位剂量定义为包含预定量的治疗组合物。待施用的量和特定途径和制剂处于临床领域技术人员的技能范围内。单位剂量不需要以单次注射施用,但是可以包含在设定的时间阶段内连续灌注。对于本发明的病毒成分,单位剂量可以方便地以μg或mg miRNA或miRNA模拟物的方式描述。备选地,指定量可以是作为每日平均剂量、每周平均剂量或每月平均剂量施用的量。
miRNA可以以大约或至少大约0.5、1、5、10、15、20、25、30、35、40、45、50、60、70、80、90、100、110、120、130、140、150、160、170、180、190、200、210、220、230、240、250、260、270、280、290、300、310、320、330、340、350、360、370、380、390、400、410、420、430、440、450、460、470、480、490、500、510、520、530、540、550、560、570、580、590、600、610、620、630、640、650、660、670、680、690、700、710、720、730、740、750、760、770、780、790、800、810、820、830、840、850、860、870、880、890、900、910、920、930、940、950、960、970、980、990、1000μg或mg或更多或从其中导出的任何范围的剂量向患者施用。备选地,指定量可以是作为每日平均剂量、每周平均剂量或每月平均剂量施用的量或者其可以以mg/kg方式表示,其中kg指患者重量,mg在上文说明。在其他实施方案中,指定量是上述的任何数但是表示为mg/m2(对于肿瘤大小或者患者表面积)。
B.注射组合物和制剂
在一些实施方案中,用于递送miRNA或编码其的表达构建体或其组合的方法是经由全身施用。然而,本文所公开的药物组合物也可以肠胃外、皮下、直接、气管内、静脉内、真皮内、肌内或甚至腹膜内施用,如美国专利5,543,158;5,641,515和5,399,363(每一专利全文明确地通过参考并入本文)中所述。
核酸注射可以通过注射器或者用于注射溶液的任何其他方法递送,只要核酸和任何相关成分可以通过注射所需的特定的针规即可。注射器系统也已经描述用于基因治疗,允许精确地在任何深度多次注射预定量的溶液(美国专利5,846,225)。
作为游离碱或可药用盐的活性化合物溶液在适当混合有表面活性剂,例如羟基丙基纤维素的水中制备。也可以在甘油、液体聚乙二醇、其混合物中和在油类中制备分散液。在储存和使用的常规条件下,这些制剂包含防腐剂以防止微生物生长。适宜注射使用的药物形式包括无菌水溶液或分散液和用于临时制备无菌注射溶液或分散液的无菌粉剂(美国专利5,466,468,其全文明确地通过参考并入本文)。在所有情况下,剂型必须是无菌的并且必须是易注射程度的流体。其必须是于制造和储存条件下稳定的并且必须防止微生物,例如细菌和真菌的污染作用。载体可以是溶剂或分散介质,包含例如水、乙醇、多元醇(例如甘油、丙二醇和液体聚乙二醇等等)、其适宜混合物和/或植物油。例如可以通过使用包衣,例如卵磷脂、通过维持分散液所需要的颗粒大小和通过使用表面活性剂维持适当的流动性。对微生物作用的抑制可以通过多种抗菌剂和抗真菌剂,例如对羟基苯甲酸酯类、三氯叔丁醇,苯酚,山梨酸,硫柳汞等实现。在许多情况下,将优选包括等渗剂,例如糖或氯化钠。注射组合物的延长吸收可以通过在组合物中使用延迟吸收试剂,例如,单硬脂酸铝和明胶实现。
在某些制剂中,采用基于水的制剂,而在另外一些情况下,可以是基于脂质的制剂。在本发明的特定实施方案中,包含肿瘤抑制蛋白或者编码其的核酸的组合物是基于水的制剂。在其他实施方案中,制剂是基于脂质的。
例如对于水溶液的肠胃外施用,必要时溶液应当被适宜缓冲并且首先使用足够的盐或葡萄糖使液体稀释液具有等渗性。这些特定水溶液特别适宜静脉内、肌内、皮下、瘤内、病损部位内和腹膜内施用。在这一点上,可以采用的无菌水介质依据本公开将会是本领域技术人员已知的。例如,一次剂量可以溶解于1ml等渗NaCl溶液中,并且,或者加入到1000ml皮下灌注流体中,或者在计划灌注部位注射(见例如,“Remington′s Pharmaceutical Sciences”第15版,第1035-1038和1570-1580页)。取决于被治疗受试者的状况,必定发生剂量的一些改变。负责施用的人员无论如何将针对个体受试者确定适当剂量。此外,对于人类施用,制剂应该满足FDA生物制剂标准办公室所要求的无菌性、致热原性、一般安全性和纯度标准。
如本文所使用,“载体”包括任何和全部的溶剂、分散介质、运载体、包衣、稀释剂、抗细菌剂和抗真菌剂、等渗剂和吸收延迟剂、缓冲剂、载体溶液、悬液、胶体等。此类介质和试剂用于药物活性物质的用途是本领域众所周知的。其在治疗组合物中的用途可以考虑,除非任何常规介质或试剂与活性成分不相容。补充的活性成分也可加入到组合物中。
短语“可药用”指施用至人时不产生变态反应或类似不良反应的分子实体和组合物。
核酸以与剂量制剂相容的方式并且以治疗有效量施用。待施用的量取决于待治疗的受试者,包括例如疾病或癌症的侵袭性、任何肿瘤或损害的大小、先前治疗或其他疗程治疗。需要施用的活性成分的精确的量依赖于医师的判断。最初施用和后续施用的适宜方案也是可变的,但典型的是先最初施用,然后是其他施用。此类施用可以作为一次剂量、在跨越10、20、30、40、50、60分钟和/或1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24或更多个小时和/或1、2、3、4、5、6、7天或更长的时间内连续地全身施用。此外,可通过由制剂和/或施用模式实现的定时释放或持续释放机制施用。
C.组合治疗
在某些实施方案中,本发明组合物和方法涉及miRNA或编码其的表达构建体。这些miRNA组合物可以与第二治疗法组合使用以增强miRNA治疗的效果或者提高所采用的另一治疗法的治疗效果。这些组合物将以有效实现预期效果,例如杀死癌细胞和/或抑制细胞过度增殖的组合量提供。该过程可涉及细胞与miRNA或第二治疗法同时或不同时间接触。这可以如下实现:通过细胞与一种或一种以上组合物或包含一种或一种以上试剂的药物制剂接触,或者通过细胞与两种或两种以上不同组合物或制剂接触,其中一种组合物提供(1)miRNA;和/或(2)第二治疗剂。可以施用包括化学治疗、放射治疗、手术治疗、免疫治疗或基因治疗的第二组合物或方法。
可以预期到的是可以在相互大约12-24小时内、并且优选地在相互大约6-12小时内向患者提供miRNA治疗和第二治疗法。然而,在一些情况下,希望明显延长治疗时间期限,时间期限为从几天(2、3、4、5、6或7)至几周(1、2、3、4、5、6、7或8)的分别施用间隔。
在某些实施方案中,疗程将持续1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90天或更长。可以预期到的是,在第1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89和/或90天或其任意组合,给于第一试剂,并且在第1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89和/或90天或其任意组合,给于另一试剂。在一天内(24小时的时间内),可以向患者一次施用或者多次施用试剂。此外,可以预期到的是在一个疗程之后有一个不进行治疗的时间段。该时间段可持续1、2、3、4、5、6、7天和/或1、2、3、4、5周和/或1、2、3、4、5、6、7、8、9、10、11、12月或更长,取决于患者状况,例如其预后、强度、健康等。
可采用多种组合,例如miRNA治疗法是“A”并且第二治疗法是“B”:
A/B/A B/A/B B/B/A A/A/B A/B/B B/A/A A/B/B/B B/A/B/B
B/B/B/A B/B/A/B A/A/B/B A/B/A/B A/B/B/A B/B/A/A
B/A/B/A B/A/A/B A/A/A/B B/A/A/A A/B/A/A A/A/B/A
任何本发明化合物或治疗向患者的施用将遵循施用此类化合物的一般方案,如果存在的话,要考虑载体或任何蛋白质或其他试剂的毒性。因此,在一些实施方案中,存在检测归因于组合治疗的毒性的步骤。预计在需要时将重复治疗周期。也可以预期到的是,多种标准治疗法以及手术介入可与所述治疗法组合应用。
在特定方面,可以预期到的是第二治疗法,例如化学治疗、放射治疗、免疫治疗、手术治疗或其他基因治疗被用来与如本文所述的miRNA治疗相组合。
1.化学治疗
根据本发明可使用广泛多种的化学治疗剂。术语“化学治疗”指使用药物治疗癌症。“化学治疗剂”用于指在治疗癌症中施用的化合物或组合物。这些试剂或药物通过它们在细胞内的活性模式分类,例如它们是否或者在什么阶段影响细胞周期。备选地,试剂可基于其直接交联DNA、嵌入DNA或者通过影响核酸合成引起染色体和有丝分裂异常的能力来表征。大部分化学治疗剂归于下列几类:烷化剂、抗代谢药、抗肿瘤抗生素、有丝分裂抑制剂和亚硝基脲。
a.烷化剂
烷化剂是直接与基因组DNA相互作用以防止癌细胞增殖的药物。该类化学治疗药物代表着影响细胞周期所有阶段的试剂,即它们不是阶段特异性的。可应用烷化剂治疗慢性白血病、非霍奇金淋巴瘤、霍奇金病、多发性骨髓瘤、和乳腺、肺和卵巢的特定癌症。它们包括:白消安、苯丁酸氮芥、顺铂、环磷酰胺(环磷氮芥)、达卡巴嗪、异环磷酰胺、氮芥(氮芥)和美法仑。曲格列酮可以用于与任何一个或一个以上的这些烷化剂相组合治疗癌症。
b.抗代谢药
抗代谢药破坏DNA和RNA合成。与烷化剂不同,它们特异性地影响细胞周期的S期。它们除了用于治疗乳腺、卵巢和胃肠道肿瘤之外,还已经用于治疗慢性白血病。抗代谢药包括5-氟尿嘧啶(5-FU)、阿糖胞苷(Ara-C)、氟达拉滨、吉西他滨和甲氨蝶呤。
5-氟尿嘧啶(5-FU)具有化学名5-氟-2,4(1H,3H)-嘧啶二酮。其作用机制被认为是通过阻断脱氧尿苷酸至胸苷酸的甲基化反应。因此,5-FU干扰脱氧核糖核酸(DNA)的合成并且较小程度地抑制核糖核酸(RNA)的形成。由于DNA和RNA是细胞分裂和增殖所必需的,据认为5-FU的效应是产生胸苷缺乏,导致细胞死亡。因此,5-FU的效应存在于快速分裂的细胞内,快速分裂是转移癌的特征。
c.抗肿瘤抗生素
抗肿瘤抗生素具有抗微生物活性和细胞毒性活性。这些药物也通过化学性抑制酶和有丝分裂或者改变细胞膜而干扰DNA。这些试剂不是阶段特异性的,以致于它们在细胞周期的所有阶段起作用。因此,它们广泛用于多种癌症。抗肿瘤抗生素实例包括博来霉素、更生霉素、柔红霉素、阿霉素和伊达比星,其中一些在下文更详细描述。广泛用于肿瘤临床治疗环境的这些化合物以从25-75mg/m2的剂量21天的间隔静脉大丸剂注射阿霉素至35-100mg/m2静脉或口服依托泊苷施用。
d.有丝分裂抑制剂
有丝分裂抑制剂包括可以抑制细胞分裂或有丝分裂所需蛋白质合成的植物生物碱和其他天然试剂。它们在细胞周期的特定阶段起作用。有丝分裂抑制剂包括多西他塞、依托泊苷(VP16)、紫杉醇、红豆杉醇、多西他赛、长春碱、长春新碱和长春瑞滨。
e.亚硝基脲
像烷化剂一样,亚硝基脲抑制DNA修复蛋白。它们除了用于治疗脑肿瘤外,还用于治疗非霍奇金淋巴瘤、多发性骨髓瘤、恶性黑素瘤。实例包括卡氮芥和洛莫司汀。
2.放射治疗
放射治疗也称作辐射治疗,是用电离辐射治疗癌症和其他疾病。电离辐射储存能量,通过损伤遗传物质使得这些细胞不能够继续生长,以损伤或破坏所治疗区域的细胞。虽然辐射损伤癌细胞和正常细胞,但是正常细胞能够自我修复并正确地起作用。放射治疗可用于治疗局限性实体肿瘤,例如皮肤、舌、喉、脑、乳腺或宫颈癌症。其还可用于治疗白血病和淋巴瘤(分别是血液形成细胞和淋巴系统癌症)。
根据本发明使用的放射治疗可包括,但不限于,使用γ-射线、X-射线和/或向肿瘤细胞直接递送放射性同位素。也考虑其他形式的DNA损伤因素,例如微波、质子束照射(美国专利5,760,395和4,870,287)和UV-照射。最有可能所有这些因素对DNA、DNA前体、DNA复制和修复以及染色体的组装和维持造成广泛损伤。对于X-射线的剂量范围从长时间段的每日50至200伦琴的剂量(3至4周),至2000至6000伦琴的单次剂量。放射性同位素的剂量范围变化极大,并且依赖于同位素的半衰期、所释放放射线的强度和类型以及被肿瘤细胞的摄取。放射治疗可包括使用放射标记的抗体以直接向癌症部位递送剂量辐射(放射免疫治疗)。一旦抗体被注射入体内,其积极地搜寻出癌细胞,通过辐射的细胞杀伤(细胞毒性)作用摧毁癌细胞。该方法可使辐射损伤健康细胞的危险降到最低。
对于脑和其他肿瘤的立体定位放射手术(γ刀)不使用刀,而是来自γ放射治疗的数百个不同角的极精确靶向束。仅需要一期放射治疗,大约4至5小时。为了该种治疗,将特制金属框附在头上。然后,开展几次x-射线扫描以找到需要治疗的精确区域。在脑肿瘤的放射治疗期间,患者躺卧,其头位于巨大头盔中,头盔具有数百个孔允许放射治疗束穿过。相关方法允许定位身体其他区域的肿瘤以便治疗。
3.免疫治疗
在癌症治疗的情况下,免疫治疗通常依赖于使用免疫效应细胞和分子以靶向和摧毁癌细胞。曲妥珠单抗(赫赛汀TM)即为此类实例。免疫效应器可以是例如对肿瘤细胞表面的一些标记特异的抗体。抗体可以单独充当治疗的效应器或者其可以招募其他细胞实际行使细胞杀伤。抗体也可以缀合至药物或毒素(化学治疗剂、放射性核素、蓖麻毒蛋白A链、霍乱毒素、百日咳毒素等)并且仅充当靶向剂。备选地,效应器可以是携带有直接或间接与肿瘤细胞靶相互作用的表面分子的淋巴细胞。多种效应器细胞包括细胞毒性T细胞和NK细胞。治疗方式的组合,即直接的细胞毒性活性和抑制或降低ErbB2将会在ErbB2过表达的癌症治疗中提供治疗益处。
在免疫治疗的一个方面,肿瘤或疾病细胞必须带有适宜靶向,即在大多数细胞上不存在的一些标记。存在许多肿瘤标记并且任何这些肿瘤标记在本发明中适宜靶向。共有的肿瘤标记包括癌胚抗原、前列腺特异性抗原、泌尿肿瘤相关的抗原、胎儿抗原、酪氨酸酶(p97)、gp68、TAG-72、HMFG、唾液酸Lewis抗原、MucA、MucB、PLAP、雌激素受体、层粘连蛋白受体、erb B和p155。免疫治疗的一个备选方面是组合抗癌效果与免疫刺激效果。也存在免疫刺激分子,包括:细胞因子例如IL-2、IL-4、IL-12、GM-CSF、γ-IFN、趋化因子例如MIP-1、MCP-1、IL-8和生长因子例如FLT3配体。免疫刺激分子,或者作为蛋白质或者用于基因递送,与肿瘤抑制物例如MDA-7的组合已经显示出增强抗肿瘤效果(Ju等,2000)。此外,抗任何这些化合物的抗体可用于本文所述抗癌试剂的靶向。
当前研究中的或者使用中的免疫治疗剂实例为免疫佐剂,例如牛分枝杆菌(Mycobacterium bovis)、恶性疟原虫(Plasmodium falciparum)、二硝基氯苯和芳香族化合物(美国专利5,801,005和5,739,169;Hui和Hashimoto,1998;Christodoulides等,1998)、细胞因子治疗剂例如干扰素α、干扰素β和干扰素γ、IL-1、GM-CSF和TNF(Bukowski等,1998;Davidson等,1998;Hellstrand等,1998)基因治疗剂例如TNF、IL-1、IL-2、p53(Qin等,1998;Austin-Ward和Villaseca,1998;美国专利5,830,880和5,846,945)以及单克隆抗体,例如抗神经节苷脂GM2抗体、抗HER-2抗体、抗p185抗体;Pietras等,1998;Hanibuchi等,1998;美国专利5,824,311)。赫赛汀(曲妥珠单抗)是阻断HER2-neu受体的嵌合(小鼠-人)单克隆抗体。其拥有抗肿瘤活性并且批准用于恶性肿瘤的治疗(Dillman,1999)。表6是几种已知抗癌免疫治疗剂及其靶的非限定性列表。可以预期到的是一个或一个以上这些治疗剂可以与本文所述miRNA治疗剂一起使用。
表6
通用名称 | 靶 |
西妥昔单抗 | EGFR |
帕尼单抗 | EGFR |
曲妥珠单抗 | erbB2受体 |
贝伐单抗 | VEGF |
阿仑单抗 | CD52 |
吉妥单抗奥唑米星 | CD33 |
利妥昔单抗 | CD20 |
托西莫单抗 | CD20 |
马妥珠单抗 | EGFR |
替伊莫单抗 | CD20 |
托西莫单抗 | CD20 |
HuPAM4 | MUC1 |
MORAb-009 | 间皮素 |
G250 | 碳酸酐酶IX |
mAb 8H9 | 8H9抗原 |
M195 | CD33 |
ipilimumab | CTLA4 |
HuLuc63 | CS1 |
阿仑单抗 | CD53 |
依帕珠单抗 | CD22 |
BC8 | CD45 |
HuJ591 | 前列腺特异性膜抗原 |
hA20 | CD20 |
来沙木单抗 | TRAIL受体-2 |
帕妥珠单抗 | HER-2受体 |
Mik-β-1 | IL-2R |
RAV12 | RAAG12 |
SGN-30 | CD30 |
AME-133v | CD20 |
HeFi-1 | CD30 |
BMS-663513 | CD137 |
Volociximab | 抗-α5β1整联蛋白 |
GC1008 | TGFβ |
HCD122 | CD40 |
希普利珠单抗 | CD2 |
MORAb-003 | 叶酸受体α |
CNTO 328 | IL-6 |
MDX-060 | CD30 |
Ofatumumab | CD20 |
SGN-33 | CD33 |
存在诸多用于癌症被动免疫治疗的不同方法。它们大概分成如下几类:抗体单独注射;偶联至毒素或化学治疗剂的抗体的注射;偶联至放射性同位素的抗体的注射;抗独特型抗体的注射;和骨髓中肿瘤细胞的清除。
4.基因治疗
仍然在另一个实施方案中,组合治疗包括基因治疗,其中治疗性多核苷酸在一个或一个以上治疗miRNA施用之前、之后或同时施用。治疗性多肽或者编码核酸与miRNA组合递送可对靶组织具有组合的治疗效果。本发明包含多种蛋白质,其中一些在下文描述。可以与本发明组合用于多种形式基因治疗靶向的多种基因包括,但不限于细胞增殖诱导物、细胞增殖抑制剂、程序性细胞死亡调节物、细胞因子和其他治疗核酸或者编码治疗蛋白质的核酸。
肿瘤抑制物癌基因的作用是抑制细胞过度增殖。这些基因的失活破坏了其抑制活性,导致增殖不受调节。肿瘤抑制物(例如治疗多肽)p53、FHIT、p16和C-CAM可以采用。
除了p53之外,另一个细胞增殖抑制剂是p16。真核细胞周期的多数转换由细胞周期蛋白依赖的激酶或CDK激发。细胞周期蛋白依赖的激酶4(CDK4)是一种CDK,其调节进展通过G1。该酶的活性可以在晚G1期磷酸化Rb。CDK4的活性通过激活亚基D型细胞周期蛋白和通过抑制亚基p16INK4控制,p16INK4已经被表征为特异性结合并抑制CDK4并且因此可以调节Rb磷酸化的蛋白质(Serrano等,1993;Serrano等,1995)。由于p16INK4蛋白质是CDK4抑制剂(Serrano,1993),该基因的缺失可以增加CDK4的活性,导致Rb蛋白质的过度磷酸化。还已知p16调节CDK6的功能。
p16INK4属于新近描述的一类CDK-抑制蛋白,该类蛋白还包括p16B、p19、p21WAF1和p27KIP1。p16INK4基因位于9p21,该区是许多肿瘤类型中频繁缺失的染色体区域。p16INK4基因的纯合缺失和突变在人肿瘤细胞系中常见。该证据表明p16INK4基因是肿瘤抑制基因。然而,该解释受到如下观察结果的挑战,即在原代未培养的肿瘤中p16INK4基因改变的频率远远低于培养的细胞系中(Caldas等,1994;Cheng等,1994;Hussussian等,1994;Kamb等,1994;Mori等,1994;Okamoto等,1994;Nobori等,1995;Orlow等,1994;Arap等,1995)。通过转染质粒表达载体对野生型p16INK4功能的恢复降低了一些人癌症细胞系的集落形成(Okamoto,1994;Arap,1995)。
根据本发明可以使用的其他基因包括Rb、APC、DCC、NF-1、NF-2、WT-1、MEN-I、MEN-II、zac1、p73、VHL、MMAC1/PTEN、DBCCR-1、FCC、rsk-3、p27、p27/p16融合基因、p21/p27融合基因、抗凝基因(例如COX-1、TFPI)、PGS、Dp、E2F、ras、myc、neu、raf、erb、fms、trk、ret、gsp、hst、abl、E1A、p300、血管发生中涉及的基因(例如VEGF、FGF、血小板反应蛋白、BAI-1、GDAIF或它们的受体)和MCC。
5.外科手术
大约60%的癌症患者将经历一些类型的外科手术,其包括预防性手术、诊断性或分期手术、治疗性手术和姑息性手术。治疗性手术是可以与其他治疗法,如本发明治疗法、化学治疗法、放射治疗法、激素治疗法、基因治疗法、免疫治疗法和/或备选治疗法联合的癌症治疗。
治疗性手术包括切除术,其中物理性去除、切除和/或破坏全部或部分癌组织。肿瘤切除术指物理性去除至少部分肿瘤。除了肿瘤切除术之外,外科手术治疗还包括激光外科手术、冷冻外科手术、电外科手术和显微控制手术(Mohs外科手术)。还进一步可以预期到的是,本发明可用于与浅表癌、前期癌或附带量的正常组织去除联合。
在切除部分或全部癌细胞、组织或肿瘤时,会在身体内形成空洞。可通过灌注、直接注射或区域局部应用另外的抗癌治疗实现治疗。此类治疗可以重复,例如每1、2、3、4、5、6或7天、或每1、2、3、4和5周或者每1、2、3、4、5、6、7、8、9、10、11或12个月。这些治疗同样可以改变剂量。
6.其他试剂
可以预期到的是其他试剂可用于与本发明相组合以改善治疗的治疗性效果。这些额外的试剂包括免疫调节剂、上调细胞表面受体和缝隙连接的试剂、细胞抑制剂和分化试剂、细胞黏着抑制剂、提高高增生性细胞对细胞凋亡诱导剂敏感性的试剂或其他生物学试剂。免疫调节剂包括肿瘤坏死因子;干扰素α,β和γ;IL-2和其他细胞因子;F42K和其他细胞因子类似物;或者MIP-1,MIP-1β,MCP-1,RANTES,和其他趋化因子。还可以预期到的是,细胞表面受体或其配体,如Fas/Fas配体、DR4或DR5/TRAIL(Apo-2配体)的上调通过确立对高增生性细胞的自分泌或旁分泌效应将使本发明具有诱导细胞凋亡的能力。通过提高缝隙连接数增加细胞间信号传导将增加对临近高增生性细胞群体的抗高增生性作用。在其他实施方案中,细胞抑制剂或分化试剂可用于与本发明相组合以改善治疗的抗高增生效果。考虑的了细胞黏着抑制剂以改善本发明的疗效。细胞黏着抑制剂实例是黏着斑激酶(FAK)抑制剂和洛伐他汀。还可以预期到的是,增加高增生性细胞对细胞凋亡敏感性的其他试剂,例如抗体c225,可用于与本发明相组合以改善治疗疗效。
Apo2配体(Apo2L,也称作TRAIL)是肿瘤坏死因子(TNF)细胞因子家族成员。TRAIL在许多类型癌细胞中激活快速的细胞凋亡,然而对正常细胞不具有毒性。TRAIL mRNA广泛存在于多种组织中。大多数正常细胞表现出对TRAIL的细胞毒性作用具有抵抗,表明存在保护细胞不被TRAIL诱导细胞凋亡的机制。描述的TRAIL的第一个受体称作死亡受体4(DR4),包含胞质“死亡结构域”;DR4传递由TRAIL携带的细胞凋亡信号。已经鉴定出结合TRAIL的额外的受体。一个受体称作DR5,包含胞质死亡结构域并且与DR4非常相似传递细胞凋亡信号。DR4和DR5mRNA在多种正常组织和肿瘤细胞系中表达。最近,已经鉴定出诱杀受体例如DcR1和DcR2,其阻止TRAIL通过DR4和DR5诱导细胞凋亡。因此,这些诱杀受体代表着直接在细胞表面调节对促细胞凋亡细胞因子敏感性的新机制。这些抑制性受体在正常组织内的优先表达表明,TRAIL可以用作诱导癌细胞细胞凋亡的同时保护正常细胞的抗癌剂(Marsters等,1999)。
在引入细胞毒性化学治疗药物之后开展癌症治疗中存在许多进步。然而,化学治疗的后果之一是药物抗性表型的产生/获得和多药耐药的产生。药物抗性的产生仍然是此类肿瘤治疗的主要障碍,并且因此明显需要替代方法,例如基因治疗。
用于与化学治疗、放射治疗或生物治疗联合的另一种形式的治疗包括过热治疗,其为将患者组织暴露于高温(一直到106°F)下的方法。外部或内部加热装置可用于局部、区域或全身过热治疗应用中。局部过热治疗包括向小的区域例如肿瘤应用热治疗。加热可以用来自体外设备的靶向肿瘤的高频波在外部产生。内部加热可涉及无菌探针,包括细的经加热的导线或者充满热水的中空管、植入的微波天线或射频电极。
对于区域治疗,将患者器官或者肢体加热,这使用产生高能量的装置如磁体实现。备选地,患者的一些血液被取出,并且在灌注入将被内部加热的区域之前加热。在癌症扩散至全身的情况下,也可以进行全身加热。热水毯、热蜡、感应线圈和热室可用于此目的。
激素治疗也可以用于与本发明联合,或者与先前所述的其他癌症治疗相组合。激素可用于治疗某些癌症,例如乳腺癌、前列腺癌、卵巢癌或宫颈癌,以降低某些激素的水平或者阻断某些激素的效应,例如睾酮或雌激素。该种治疗常常用于与至少一种其他癌症治疗向组合作为一种治疗选择或者降低转移风险。
于2006年2月8日提出的、要求2005年2月8日所提出美国临时申请序列号60/650,807的优先权的美国申请序列号11/349,727在此通过参考全部并入本申请。
III.miRNA分子
关于微RNA分子(“miRNA”)虽然已经有19个核苷酸和一直到23个核苷酸长度的报道,但是其长度通常为21至22个核苷酸。miRNA各自从更长的前体RNA分子(“前体miRNA”)加工而来。前体miRNA从非蛋白质编码基因转录而来。前体miRNA具有两个互补区域,使得其能够形成茎-环样结构或者折回样结构,该结构在动物中由称作切酶的核糖核酸酶III样核酸酶切开。所加工的miRNA有代表性地是部分茎。
所加工miRNA(也被称为“成熟miRNA”)变成大复合体的一部分以下调特定靶基因或其基因产物。动物miRNA实例包括与靶不完全碱基配对的那些,其使翻译停止(Olsen等,1999;Seggerson等,2002)。siRNA分子也是由切酶加工,但是是从长的双链RNA分子加工而来。siRNA非天然存在于动物细胞中,但是它可以通过RNA诱导的沉默复合体(RISC)指导mRNA靶的序列特异性切割(Denli等,2003)。
A.阵列制备
本发明某些实施方案涉及mRNA或核酸阵列、miRNA或核酸阵列和/或miRNA或核酸探针阵列的制备和用途,其是核酸分子(探针)的巨阵列或微阵列,所述核酸分子(探针)与衍生自由miR-20miRNA所调节多种基因和基因途径的多个核酸、mRNA或miRNA分子、前体miRNA分子或核酸具有完全或几乎完全的互补性(在探针的整个长度上)或同一性(在探针的整个长度上),并且以空间分开的组织结构置于支持物或支持材料上。巨阵列有代表性地是其上已经点有探针的硝酸纤维素或尼龙板。微阵列更紧密地放置核酸探针,以致于在典型的1-4平方厘米的区域内可以固定至多10,000种核酸分子。微阵列可以通过将核酸分子例如基因、寡核苷酸等点在基质上或者通过在基质上原位构建寡核苷酸序列来制造。所点的或者所构建的核酸分子可以以每平方厘米至多大约30种非相同核酸分子的高密度基质模式或者更高密度的基质模式,例如每平方厘米至多大约100或者甚至1000种的基质模式应用。与滤膜阵列的基于硝酸纤维素的材料不同,微阵列有代表性地使用包被玻璃作为固体支持物。因具有标记RNA和/或miRNA-互补核酸样品的有序阵列,每一样品的位置可以被追踪并且可以与原始样品联系起来。
在其中多个不同核酸探针稳定结合在固体支持物表面的多种不同的阵列装置是本领域技术人员已知的。对于阵列有用的基质包括尼龙、玻璃、金属、塑料、乳胶和硅。此类阵列可以多种不同方式变化,包括平均探针长度、探针序列或类型、探针和阵列表面结合的性质,例如共价或非共价等。在对于除了探针之外的任何参数的疗效上,本发明的标记和筛选方法和阵列不限于检测miRNA或基因或者代表基因的核酸;因此,方法和组合物可以用于多种不同类型的核酸阵列。
用于制备微阵列的代表性方法和仪器已经描述于例如美国专利5,143,854、5,202,231、5,242,974、5,288,644、5,324,633、5,384,261、5,405,783、5,412,087、5,424,186、5,429,807、5,432,049、5,436,327、5,445,934、5,468,613、5,470,710、5,472,672、5,492,806、5,525,464、5,503,980、5,510,270、5,525,464、5,527,681、5,529,756、5,532,128、5,545,531、5,547,839、5,554,501、5,556,752、5,561,071、5,571,639、5,580,726、5,580,732、5,593,839、5,599,695、5,599,672、5,610;287、5,624,711、5,631,134、5,639,603、5,654,413、5,658,734、5,661,028、5,665,547、5,667,972、5,695,940、5,700,637、5,744,305、5,800,992、5,807,522、5,830,645、5,837,196、5,871,928、5,847,219、5,876,932、5,919,626、6,004,755、6,087,102、6,368,799、6,383,749、6,617,112、6,638,717、6,720,138,以及WO 93/17126、WO 95/11995、WO 95/21265、WO 95/21944、WO 95/35505、WO 96/31622、WO97/10365、WO 97/27317、WO 99/35505、WO 09923256、WO 09936760、WO0138580、WO 0168255、WO 03020898、WO 03040410、WO 03053586、WO03087297、WO 03091426、WO03100012、WO 04020085、WO 04027093、EP 373203、EP 785 280、EP 799 897和UK 8 803 000中;其公开全部通过参考并入本文。
可以预期到的是阵列可以是高密度阵列,抑制它们包含2、20、25、50、80、100或更多种不同探针。可以预期到的是它们可以包含1000、16,000、65,000、250,000或1,000,000或更多种不同探针。探针可以针对一个或一个以上不同生物体或者细胞类型中的mRNA和/或miRNA靶。在一些实施方案中,寡核苷酸探针长度范围从5至50、5至45、10至40、9至34或10至40个核苷酸。在某些实施方案中,寡核苷酸探针长度为5、10、15、20至20、25、30、35、40个核苷酸,包括它们之间的所有整数和范围。
通常已知阵列中每一不同探针序列的位置和序列。然而,大数量的不同探针可以占用相对小的面积,提供了高密度阵列,其具有通常大于每平方厘米60、100、600、1000、5,000、10,000、40,000、100,000或400,000种不同寡核苷酸探针的探针密度。阵列的表面积可以是大约或者小于大约1、1.6、2、3、4、5、6、7、8、9或10cm2。
然而,本领域普通技术人员可以容易地分析使用阵列产生的数据。此类方法描述于上文并且包括在WO 9743450、WO 03023058、WO 03022421、WO03029485、WO 03067217、WO 03066906、WO 03076928、WO 03093810、WO03100448A1中找到的信息,所有这些明确地通过参考并入本文。
B.样品制备
可以预期到的是广泛多种样品的RNA和/或miRNA可以使用本发明的阵列、探针索引(index of probe)或阵列技术分析。虽然可以预期到的是内源miRNA与本发明组合物和方法,重组一起使用,但是miRNA,包括与内源miRNA或前体miRNA互补或相同的核酸也可以如本文所述处理和分析。样品可以是生物学样品,在此情况下,它们可以来自活组织检查、细针抽取物、表皮脱落物、血液、组织、器官、精液、唾液、眼泪、其他体液、毛囊、皮肤或包含生物细胞,特别是癌细胞或高增生性细胞或由其组成的任何样品。在某些实施方案中,样品可以是,但不限于,活组织检查或从活组织检查或其他体液或组织纯化或富集一定程度的细胞。备选地,样品可以不是生物学样品,而是化学混合物,例如无细胞的反应混合物(其可以包含一种或一种以上的生物酶)。
C.杂交
当制备阵列或一组探针和/或标记样品中的核酸或探针之后,靶核酸群体在杂交条件下与阵列或探针接触,其中此种条件可以按所期望那样调整,以针对待开展的特定分析提供最佳特异性水平。适宜杂交条件是本领域技术人员众所周知的综述于Sambrook等(2001)和WO 95/21944中。在许多实施方案中特别感兴趣的是在杂交过程中使用严格条件。严格条件是本领域技术人员已知的。
特别考虑的是单个阵列或探针组可以与多个样品接触。样品可以用不同的标记物标记以区别样品。例如,单个阵列可以与用Cy3标记的肿瘤组织样品和用Cy5标记的正常组织样品接触。对于样品中对应于阵列上探针的特定miRNA之间的差异可以容易地确定和定量。
小的阵列表面积使得杂交条件一致,例如温度调节和盐含量。此外,由于高密度阵列占用的面积小,杂交可以在非常小的流体体积(例如大约250μl或更少,包括大约或少于大约5、10、25、50、60、70、80、90、100μl的体积或从其中导出的任何范围)中开展。在小的体积中,杂交可以非常快速地进行。
D.差异表达分析
本发明的阵列可以用于检测两个样品之间的差异。特别考虑的应用包括鉴定和/或定量正常样品与非正常样品之间、疾病或状况与未表现出此种疾病或状况的细胞之间、或者两个不同处理样品之间的miRNA或基因表达差异。同样,可以比较据信易患特定疾病或状况的样品与据信不易患或者抵抗该疾病或状况的样品之间的miRNA或基因表达。非正常的样品是表现出疾病或状况表型或遗传型性状的样品或者据信就该疾病或状况而言为非正常的样品。其可以与就该疾病或状况而言为正常的细胞比较。表型性状包括疾病或状况的症状或易感性,其中一项是、或者可以是、或者可以不是遗传的或者由一个或多个高增生性或肿瘤细胞引起。
阵列包含带有连接至支持物上的核酸探针的固体支持物。阵列有代表性地包含多种不同的核酸探针,其以不同的、已知的位置偶联至基质表面。这些阵列,也描述为“微阵列”或通俗语“芯片”,也已经在本领域中广泛描述,例如美国专利5,143,854、5,445,934、5,744,305、5,677,195、6,040,193、5,424,186和Fodor等(1991),为了所有目的其中每一篇文献的全文通过参考并入本文。使用机械合成方法合成这些阵列的技术描述于,例如美国专利5,384,261,为了所有目的其全文通过参考并入本文。虽然在某些方面使用平面阵列表面,阵列可以在实际上任何形状的表面或者甚至复杂表面上制造。阵列可以是珠、凝胶、多聚体表面、纤维如光纤、玻璃或任何其他适宜基质上的核酸,见美国专利5,770,358、5,789,162、5,708,153、6,040,193和5,800,992,为了所有目的其全文通过参考并入本文。阵列可如此方式包装,以便于诊断和所有内含装置的其他操作,见例如美国专利5,856,174和5,922,591,为了所有目的其全文通过参考并入本文。对于阵列、其制造和其特性有关的额外信息,还可见于2000年4月7日提出的美国专利申请序列号09/545,207,为了所有目的其全文通过参考并入本文。
特别地,阵列可以用于评估样品的病理状况,例如癌症和相关状况。特别考虑的是,本发明可以用于评估疾病各期或亚分类之间的差异,例如良性、癌性和转移组织或肿瘤之间。
待评估的表型性状包括特征,例如寿命、发病率、期望存活率、对特定药物或治疗性治疗的易感性或感受性(药物疗效)和药物毒性危险。其表型性状不同的样品也可以使用所述的组合物和方法评估。
在某些实施方案中,可产生miRNA和/或表达谱,以评估并将这些表达谱与药代动力学或治疗关联。例如,可以产生并评估患者被治疗前的或者治疗过程当中的患者肿瘤和血液样品的这些表达谱,以确定是否存在其表达与患者治疗结果关联的miRNA或基因。差异miRNA或基因的鉴定可用于诊断分析,以评定肿瘤和/或血液样品以确定将向患者提供什么样的药物方案。此外,其可以用于鉴定或者选择适宜特定临床试验的患者。如果经确定表达谱与药物疗效或药物毒性相关,则该表达谱与患者是否是接受药物、接受药物组合或者药物特定剂量的适宜患者相关。
除了上述预后分析之外,来自患有多种疾病的患者的样品可评估以确定不同的疾病是否可以基于miRNA和/或相关基因表达水平鉴定。可以基于谱进行诊断分析,医生可以使用该谱鉴定患有疾病的个体或者鉴定谁处于发展成疾病的危险之中。备选地,可以基于miRNA谱分析设计治疗方案。此类方法和组合物的实例描述于2005年5月23日提出的、题目为“包括miRNA和miRNA抑制剂分子的方法和组合物”的美国临时专利申请中,其全文通过参考并入本文。
E.其他分析法
除了使用阵列和微阵列之外,可以预期到的是许多不同的分析法可用于分析miRNA或相关基因、它们的活性和它们的作用。此类分析法包括,但不限于,核酸扩增、聚合酶链反应、定量PCR、RT-PCR、原位杂交、Northern杂交、杂交保护分析法(HPA)(GenProbe)、分支DNA(bDNA)分析法(Chiron)、滚环扩增(RCA)、单分子杂交检测(US Genomics)、侵染检测(ThirdWave Technologies)和/或Bridge Litigation分析法(Genaco)。
IV.核酸
本发明涉及可标记、用于阵列分析或者用于诊断、治疗或预后应用中的核酸、修饰或模拟核酸、miRNA、mRNA、基因和其代表性片段,特别是与病理状况如癌症相关的那些。分子可以是细胞内源产生的或者是化学或重组合成的或产生的。它们可以是分离的和/或纯化的。每一miRNA在本文描述并且包括这些miRNA序列相应的序列标识号SEQ ID NO和登录号。miRNA名称常以无“hsa-”前缀的形式缩写或提到,并且将依赖于上下文语境作如此理解。除非另外指出,在本申请中miRNA指鉴定为miR-X或let-X的人序列,其中X是数字和/或字母。
在某些方面,可以使用通过后缀“5P”或“3P”指定的miRNA探针。如在万维网sanger.ac.uk上描述的那样,“5P”指成熟miRNA衍生自前体的5’端,并且对应的“3P”指其衍生自前体的3’端,如在万维网sanger.ac.uk所述。此外,在一些实施方案中,使用了与已知人miRNA不对应的miRNA探针。可以预期到的是这些非人miRNA探针可以用于本发明实施方案中或者存在与非人miRNA同源的人miRNA。在其他实施方案中,可以采用任何哺乳动物细胞、生物学样品或其制备物。
在本发明的一些实施方案中,包含miRNA的方法和组合物可以涉及miRNA、标记物(mRNA)和/或其他核酸。核酸长度可以是、是至少或是至多3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99、100、101、102、103、104、105、106、107、108、109、110、120、130、140、150、160、170、180、190、200、210、220、230、240、250、260、270、280、290、300、310、320、330、340、350、360、370、380、390、400、410、420、430、440、450、460、470、480、490、500、510、520、530、540、550、560、570、580、590、600、610、620、630、640、650、660、670、680、690、700、710、720、730、740、750、760、770、780、790、800、810、820、830、840、850、860、870、880、890、900、910、920、930、940、950、960、970、980、990、或1000个核苷酸或从其中导出的任何范围。此长度涵盖了加工miRNA、miRNA探针、前体miRNA、包含miRNA的载体、mRNA、mRNA探针、对照核酸和其他探针和引物的长度。
在许多实施方案中,miRNA长度为19-24个核苷酸,而miRNA探针长度为19-35个核苷酸,这取决于加工miRNA和所加入的任何侧翼区域的长度。在人中,miRNA前体通常在62和110个核苷酸之间。
本发明核酸可以具有与另一核酸相同或互补的区域。可以预期到的是互补性或同源性区域可以是至少5个连续残基,可是特别考虑的是该区域是、是至少或是至多6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、21、22、23、24、25、26、27、28、29、30、31、32、33、34、35、36、37、38、39、40、41、42、43、44、45、46、47、48、49、50、51、52、53、54、55、56、57、58、59、60、61、62、63、64、65、66、67、68、69、70、71、72、73、74、75、76、77、78、79、80、81、82、83、84、85、86、87、88、89、90、91、92、93、94、95、96、97、98、99、100、110、120、130、140、150、160、170、180、190、200、210、220、230、240、250、260、270、280、290、300、310、320、330、340、350、360、370、380、390、400、410、420、430、440、441、450、460、470、480、490、500、510、520、530、540、550、560、570、580、590、600、610、620、630、640、650、660、670、680、690、700、710、720、730、740、750、760、770、780、790、800、810、820、830、840、850、860、870、880、890、900、910、920、930、940、950、960、970、980、990、或1000个连续核苷酸。应当进一步理解的是,前体miRNA或其他核酸内的互补性长度或者miRNA探针与miRNA或miRNA基因之间的互补性长度是如此长度。而且,互补性可以表示为百分数,意思是在整个探针长度上探针与其靶之间的互补性是90%或者更高。在一些实施方案中,互补性是或者是至少90%、95%或100%。具体而言,如此长度可以适用于包含SEQ ID NO:1至SEQID NO:269中任何序列、登录号或本文所公开的任何其他序列所确定核酸序列的核酸。有代表性地,提供miRNA的通用名称(在前缀中带有其鉴定来源,例如,对于人序列为“hsa”)和加工miRNA序列。除非另外指出,不带前缀的miRNA将理解为指人miRNA。此外,miRNA名称中的小写字母可以小写也可以不小写;例如,hsa-mir-130b也可以被称为miR-130B。术语“miRNA探针”指可鉴定特定miRNA或结构相关miRNA的核酸探针。
应当理解,一些核酸衍生自基因组序列或基因。在该方面,对于特定miRNA或基因,术语“基因”为简单起见用于指编码前体核酸或miRNA的基因组序列。然而,本发明实施方案可以包含在其表达中涉及的miRNA基因组序列,例如启动子或其他调节序列。
术语“重组体”可以使用,并且该术语通常指已被体外操作的分子或者此种分子的复制或表达产物。
术语“核酸”是本领域众所周知的。如本文所使用,“核酸”通常指DNA、RNA分子(一个或一个以上的链)或包含核碱基的其衍生物或类似物。核碱基包括,例如在DNA(例如腺嘌呤“A”、鸟嘌呤“G”、胸腺嘧啶“T”或胞嘧啶“C”)或RNA(例如A、G、尿嘧啶“U”或C)中天然存在的嘌呤或嘧啶碱基。术语“核酸”包含术语“寡核苷酸”和“多核苷酸”,术语“寡核苷酸”和“多核苷酸”每一个都是术语“核酸”的亚属。
术语“miRNA”通常指单链分子,但是在特别的实施方案中,在本发明中应用的分子还将包含一个与同一单链分子的另一个区域或者另一个核酸部分互补(在整个链长度上具有10和50%之间的互补性)、基本互补(在整个链长度上具有大于50%但小于100%的互补性)或完全互补的区域或额外链。因此,miRNA可包含含有特定序列的一个或一个以上互补链或自身互补链或“互补物”的分子。例如,前体miRNA可具有自身互补区域,其一直到100%的补体性。本发明的miRNA探针或核酸与其靶的互补性可以包括、可以是、可以是至少60、65、70、75、80、85、90、95、96、97、98、99或100%互补性。
应当理解,本发明的“合成核酸”意思是指核酸不具有天然存在核酸的全部或部分化学结构或序列。因此,应当理解的是,术语“合成miRNA”指在细胞中或者在生理条件下作为天然存在miRNA起作用的“合成核酸”。
虽然本发明实施方案可包括合成miRNA或合成核酸,但是在本发明的一些实施方案中,核酸分子无需是“合成”的。在某些实施方案中,在本发明方法和组合物中采用的非合成核酸或miRNA可以具有天然存在mRNA或miRNA前体或成熟mRNA或miRNA的全部序列和结构。例如,在本发明方法和组合物中使用的非合成miRNA可以不具有一个或一个以上修饰核苷酸或核苷酸类似物。在这些实施方案中,非合成miRNA可以是或可以不是重组产生的。在特定实施方案中,在本发明方法和/或组合物中的核酸特别是合成miRNA,而不是非合成miRNA(即不是“合成”的miRNA);可以在其他实施方案中,本发明特别包含非合成miRNA,而不包含合成miRNA。就合成miRNA的使用而言讨论的任何实施方案可以适用于非合成miRNA,反之亦然。
应当理解的是,术语“天然存在”指在没有任何人介入的有机体中存在的事物;它可以指天然存在的野生型或突变体分子。在一些实施方案中,合成miRNA分子不具有天然存在miRNA分子的序列。在其他实施方案中,合成miRNA分子可以具有天然存在miRNA分子的序列,但是分子的化学结构,特别是与精确序列特别不相关的部分中的化学结构(非序列化学结构)不同于具有该序列的天然存在miRNA分子的化学结构。在一些情况下,合成miRNA具有序列化学结构和天然存在miRNA中不存在的非序列化学结构。然而,合成分子的序列能鉴别哪一个miRNA将被有效提供或被抑制;内源miRNA被称为“对应miRNA”。可以在本发明情况下使用的相应miRNA序列包括,但不限于,SEQ ID NO:1-269中那些序列的全部或部分以及任何其他miRNA序列、miRNA前体序列或其任何互补序列。在一些实施方案中,序列是、或衍生自、或包含本文所鉴定靶向特定miRNA(或一组miRNA)的序列的全部或部分,所述特定miRNA(或一组miRNA)可以与序列一起使用。可以选择任意1、2、3、4、5、6、7、8、9、10、11、12、13、14、15、16、17、18、19、20、30、40、50、60、70、80、90、100、110、120、130、140、150、160、170、180、190、200、210、220、230、240、250、260种或它们之间任意数量或范围的序列,而排除所有非选择序列。
如本文所使用,“杂交作用”、“杂交”或“能够杂交”理解为意思是指形成双链或三链分子或者具有部分双链或三链性质的分子。如本文所使用的术语“退火”是“杂交”的同义词。术语“杂交作用”、“杂交”或“能够杂交”包括术语“严格条件”或“高严格性”和术语“低严格性”或“低严格条件”。
如本文所使用的“严格条件”或“高严格性”是允许包含互补序列的一个或一个以上核酸链之间或之内杂交但排除随机序列杂交的那些条件。严格条件允许核酸与靶链之间有少量错配,如果存在的话。此类条件是本领域普通技术人员众所周知的,并且对于需要高选择性的应用是优选的。非限定性的应用包括分离核酸,例如基因或其核酸片段或者检测至少一个特异性mRNA转录物或其核酸片段,等等。
严格条件可以包括低盐和/或高温度条件,例如在大约42℃至大约70℃温度下大约0.02M至大约0.5M NaCl所提供的条件。应当理解,期望的严格性的温度和离子强度部分地通过特定核酸的长度、靶序列的长度和核碱基内容、核酸的电荷组成以及杂交混合物中甲酰胺、四甲基氯化铵或其他溶剂的存在或浓度决定。
还应当理解,对于杂交的这些范围、组成和条件仅仅是以非限定性实例的方式描述,并且对于特定杂交反应的预期严格性常常通过比较一个或一个以上阳性或阴性对照经验性确定。取决于所拟想的应用,优选采用变化的杂交条件以实现核酸对靶序列的不同程度的选择性。在非限定性实例中,对在严格条件下不与核酸杂交的相关靶核酸的鉴定可以通过在低温度和/或高离子强度下杂交完成。此类条件称作“低严格性”或“低严格条件”,并且低严格性的非限定性实例包括在大约20℃至大约50℃的温度范围内在大约0.15M至大约0.9M NaCl情况下进行杂交。当然,进一步修改低或高严格条件以适合特定应用处于本领域技术人员的能力范围内。
A.核碱基、核苷、核苷酸和修饰核苷酸
如本文所使用的“核碱基”指杂环碱基,例如诸如在至少一种天然存在核酸(即DNA和RNA)中存在的天然存在核碱基(即A、T、G、C或U),和此类核碱基的天然或非天然存在衍生物和类似物。核碱基通常可以与至少一个天然存在核碱基以这样一种方式形成一个或一个以上氢键(“退火”或“杂交”),即其可以代替天然存在的核碱基配对(例如A和T、G和C以及A和U之间的氢键)。
“嘌呤”和/或“嘧啶”核碱基包含天然存在嘌呤和/或嘧啶核碱基以及其衍生物和类似物,包括但不限于,嘌呤或嘧啶被一个或一个以上烷基、羧烷基、氨基、羟基、卤素(即氟、氯、溴或碘)、巯基或烷硫基部分取代的那些。优选的烷基(例如烷基、羧烷基等)部分包含大约1、大约2、大约3、大约4、大约5、至大约6个碳原子。嘌呤或嘧啶的其他非限定性实例包括脱氮嘌呤、2,6-二氨基嘌呤、5-氟尿嘧啶、黄嘌呤、次黄嘌呤、8-溴鸟嘌呤、8-氯鸟嘌呤、溴胸腺嘧啶、8-氨基鸟嘌呤、8-羟基鸟嘌呤、8-甲基乌嘌呤、8-硫乌嘌呤、氮乌嘌呤、2-氨基嘌呤、5-乙基胞嘧啶、5-甲基胞嘧啶、5-溴尿嘧啶、5-乙基尿嘧啶、5-碘尿嘧啶、5-氯尿嘧啶、5-丙基尿嘧啶、硫尿嘧啶、2-甲基腺嘌呤、甲基硫腺嘌呤、N,N-二甲腺嘌呤、氮杂腺嘌呤、8-溴腺嘌呤、8-羟基腺嘌呤、6-羟基氨基嘌呤、6-硫嘌呤、4-(6-氨基己基/胞嘧啶)等。其他实例是本领域技术人员众所周知的。
如本文所使用,“核苷”指包含共价连接至核碱基接头部分的核碱基的单个化学单位。“核碱基接头部分”的非限定性实例是包含5-碳原子的糖(即“5-碳糖”),包括但不限于脱氧核糖、核糖、阿拉伯糖或5-碳糖的衍生物或类似物。5-碳糖衍生物或类似物的非限定性实例包括2′-氟-2′-脱氧核糖或者其中糖环中的氧原子被碳取代的碳环糖。核碱基与核碱基接头部分的不同类型共价连接是本领域已知的(Kornberg和Baker,1992)。
如本文所使用,“核苷酸”指还包含“骨架部分”的核苷。骨架部分通常共价连接核苷酸至包含核苷酸的另一分子或者共价连接至另一核苷酸以形成核酸。天然存在核苷酸中的“骨架部分”有代表性地包含共价连接至5-碳糖的磷部分。骨架部分的连接有代表性地发生在5-碳糖的3′-位或者5′-位。然而,其他类型的连接是本领域已知的,特别是当核苷酸包含天然存在5-碳糖或磷部分的衍生物或类似物时。
核酸可以包含天然存在核酸中存在的核碱基、核碱基接头部分和/或骨架部分的衍生物或类似物,或完全由其组成。带有核酸类似物的RNA也可以根据本发明方法标记。如本文所使用的“衍生物”指化学修饰或改变形式的天然存在分子,而术语“模拟物”或“类似物”指结构上类似或者不类似于天然存在分子或部分,但具有相似功能的分子。如本文所使用,“部分”通常指较大化学或分子结构的较小化学或分子成分。核碱基、核苷和核苷酸类似物或衍生物是本领域众所周知的,并且已经描述(见例如,Scheit,1980,通过参考并入本文)。
核苷、核苷酸或核酸的另外非限定性实例包括美国专利5,681,947、5,652,099和5,763,167、5,614,617、5,670,663、5,872,232、5,859,221、5,446,137、5,886,165、5,714,606、5,672,697、5,466,786、5,792,847、5,223,618、5,470,967、5,378,825、5,777,092、5,623,070、5,610,289、5,602,240、5,858,988、5,214,136、5,700,922、5,708,154、5,728,525、5,637,683、6,251,666、5,480,980和5,728,525中的那些,每一篇的全文通过参考并入本文。
本发明的标记方法和实际盒特别可以预期到的是核苷酸的使用,核苷酸被修饰以连接标记并且可以掺入到miRNA分子中。此类核苷酸包括可以用染料,包括荧光染料或者用分子,例如生物素标记的那些核苷酸。可容易地得到标记的核苷酸;它们可以商业性获得或者它们可以通过本领域技术人员已知的反应合成。
用于本发明的修饰核苷酸不是天然存在核苷酸,而是在其上具有反应部分的制备的核苷酸。感兴趣的特异性反应官能团包括:氨基、巯基、烷基磺酰氧基(sulfoxyl)、氨基巯基、叠氮基、环氧化物、异硫氰酸酯、异氰酸酯、酐、一氯三嗪、二氯三嗪、一卤或二卤取代吡啶、一取代或二取代二嗪、马来酰亚胺、环氧化物、氮丙啶、磺酰卤、卤酸、烷基卤、芳基卤、烷基磺酸盐、N-羟基琥珀酰亚胺酯、亚氨酸酯、肼、叠氮基硝基苯基、叠氮化物、3-(2-吡啶基二硫代)-丙酰胺、乙二醛、醛、碘乙酰、氰甲基酯、p-硝基苯基酯、o-硝基苯基酯、羟基吡啶酯、羰基咪唑和其他此类化学基团。在一些实施方案中,反应官能团可以与核苷酸直接键合或其可以通过连接基团与核苷酸连接。功能性部分和任何接头基本上不损伤核苷酸被添加至miRNA或者被标记的能力。代表性的连接基团包括含碳连接基团,有代表性地从大约2至18、通常从大约2至8个碳原子,其中含碳连接基团可以包括或者可以不包括一个或一个以上杂原子,如S、O、N等,并且可以包括或者可以不包括一个或一个以上不饱和位点。在许多实施方案中特别感兴趣的是烷基连接基团,有代表性的是1至16个、通常1至4个碳原子的低碳烷基胺连接基团,其中连接基团可以包括一个或一个以上不饱和位点。在上述官能化靶产生的方法中使用的官能化核苷酸(或引物)可以使用已知方法制造或者从供货商,例如Sigma、Roche、Ambion、Biosearch Technologies和NEN购买。官能团可以根据本领域技术人员已知的方式制备,包括美国专利4,404,289;4,405,711;4,337,063和5,268,486以及英国专利1,529,202中的代表性信息,每一专利通过参考并入本文。
在本发明的几个实施方案中使用胺修饰的核苷酸。胺修饰的核苷酸是带有用于连接标记的活性胺基的核苷酸。可以预期到的是任何核糖核苷酸(G、A、U或C)或脱氧核糖核苷酸(G、A、T或C)可以被修饰以便标记。实例包括,但不限于,下列修饰核糖核苷酸和脱氧核糖核苷酸:5-(3-氨基烯丙基)-UTP;8-[(4-氨基)丁基]-氨基-ATP和8-[(6-氨基)丁基]-氨基-ATP;N6-(4-氨基)丁基-ATP、N6-(6-氨基)丁基-ATP、N4-[2,2-氧-双-(乙基胺)]-CTP;N6-(6-氨基)己基-ATP;8-[(6-氨基)己基]-氨基-ATP;5-炔丙基氨基-CTP、5-炔丙基氨基-UTP;5-(3-氨基烯丙基)-dUTP;8-[(4-氨基)丁基]-氨基-dATP和8-[(6-氨基)丁基]-氨基-dATP;N6-(4-氨基)丁基-dATP、N6-(6-氨基)丁基-dATP、N4-[2,2-氧-双-(乙基胺)]-dCTP;N6-(6-氨基)己基-dATP;8-[(6-氨基)己基]-氨基-dATP;5-炔丙基氨基-dCTP和5-炔丙基氨基-dUTP。此类核苷酸可以根据本领域技术人员已知的方法制备。然而,本领域普通技术人员可以制备具有同样胺修饰的其他核苷酸部分,例如5-(3-氨基烯丙基)-CTP、5-(3-氨基烯丙基)-GTP、5-(3-氨基烯丙基)-ATP、5-(3-氨基烯丙基)-dCTP、5-(3-氨基烯丙基)-dGTP、5-(3-氨基烯丙基)-dTTP或代替5-(3-氨基烯丙基)-UTP的5-(3-氨基烯丙基)-dUTP。
B.核酸制备
核酸可以通过本领域普通技术人员已知的任何技术制备,例如化学合成、酶促生产或生物学生产。特别考虑的是,化学合成本发明的miRNA探针。
在本发明的一些实施方案中,miRNA从生物学样品中回收或分离。miRNA可以是重组体或者其可以细胞天然的或内源的(从细胞基因组产生)。可以预期到的是,生物学样品可以以增强小的RNA分子例如miRNA回收的方式处理。美国专利申请序列号10/667,126描述了此类方法并且该文献明确地通过参考并入本文。通常,方法包括以含有胍和去污剂的溶液裂解细胞。
备选地,核酸合成根据标准方法开展。见例如,Itakura和Riggs(1980)以及美国专利4,704,362、5,221,619和5,583,013,每一文献通过参考并入本文。合成核酸(例如合成寡核苷酸)的非限定性实例包括使用例如描述于EP 266,032(通过参考并入本文)中的磷酸三酯、亚磷酸盐或亚磷酰胺化学和固相技术,或者如Froehler等,1986和美国专利5,705,629(每一文献通过参考并入本文)中所述经由脱氧核苷H-膦酸酯中间体通过体外化学合成制造的核酸。寡核苷酸合成的多种不同机制已经描述于例如美国专利4,659,774、4,816,571、5,141,813、5,264,566、4,959,463、5,428,148、5,554,744、5,574,146、5,602,244中,每一专利通过参考并入本文。
酶促生产核酸的非限定性实例包括在扩增反应如PCRTM中通过酶产生的核酸(见例如美国专利4,683,202和4,682,195,每一专利通过参考并入本文)或者描述于美国专利5,645,897(通过参考并入本文)中的寡核苷酸的合成。还可见Sambrook等,2001,其通过参考并入本文。
寡核苷酸合成是本领域技术人员众所周知的。寡核苷酸合成的多种不同机制已经描述于例如美国专利4,659,774、4,816,571、5,141,813、5,264,566、4,959,463、5,428,148、5,554,744、5,574,146、5,602,244中,每一专利通过参考并入本文。
用于在细胞中产生核酸的重组方法是本领域技术人员众所周知的。这些方法包括使用载体(病毒和非病毒载体)、质粒、粘粒和其他载体递送核酸至细胞,细胞可以是靶细胞(例如癌细胞)或者只是宿主细胞(以生产大量的目的RNA分子)。备选地,此类载体可以用于无细胞系统情况下,只要存在用于产生RNA分子的试剂即可。此类方法包括描述于Sambrook,2003,Sambrook,2001和Sambrook,1989中的那些,每一文献通过参考并入本文。
C.核酸分离
核酸可以使用本领域技术人员众所周知的技术分离,但是在特定实施方案中,可以采用用于分离小的核酸分子和/或分离RNA分子的方法。层析是常常使用从蛋白质或从其他核酸中分开或分离核酸的方法。此类方法可以包括胶基质电泳、过滤柱、乙醇沉淀和/或其他层析。如果打算使用或评估来自细胞的miRNA,方法通常包括在开展分离特定群体RNA的方法之前,用离液剂(例如异硫氰酸胍)和/或去污剂(例如N-月桂酰基肌氨酸盐)裂解细胞。
在用于从其他核酸中分离miRNA的特定方法中,虽然也可以使用琼脂糖制备凝胶基质,但是凝胶基质用聚丙烯酰胺制备。凝胶可以是浓度梯度的或者是浓度均匀的。板或管可用于容纳用于电泳的凝胶基质。对于核酸分离通常采用一维电泳。板用于制备平板凝胶,而管(代表性的是玻璃或橡胶管)可以用于制备管凝胶。短语“管电泳”指使用管而不是平板形成凝胶。开展管电泳的材料可以由本领域技术人员容易地制备或者从例如C.B.S.Scientific Co.,Inc.或Scie-Plas购买。
方法可以包括使用有机溶剂和/或乙醇以分离核酸,特别是本发明方法和组合物中使用的miRNA。一些实施方案描述于美国专利申请序列号10/667,126中,其通过参考并入本文。通常,该公开提供了从细胞中有效分离小RNA分子的方法,包括:向细胞裂解物中加入乙醇溶液和将醇/裂解物混合物应用在固体支持物上,然后从固体支持物上洗脱RNA分子。在一些实施方案中,加至细胞裂解物的醇的量达到了大约55%至60%的乙醇浓度。虽然可以使用不同的醇类,但是乙醇效果良好。固体支持物可以是任何结构,并且它包括珠、滤纸和柱,其可以包括带有负电基团的矿物支持物或多聚体支持物。玻璃纤维滤膜或柱对于此种分离过程效果特别好。
在特别的实施方案中,miRNA分离方法包括:a)用含胍的裂解溶液裂解细胞样品,其中产生胍浓度至少大约1M的裂解物;b)用含苯酚的提取溶液从裂解物中提取miRNA分子;c)向裂解物加入醇溶液,形成裂解物/醇混合物,其中混合物中乙醇浓度在大约35%至大约70%之间;d)将裂解物/醇混合物加至固体支持物;e)用离子溶液从固体支持物洗脱miRNA分子;和f)收集miRNA分子。有代表性地,样品被干燥并且重悬于适宜后续操作的液体和体积中。
V.标记和标记技术
在一些实施方案中,本发明涉及标记的miRNA。可以预期到的是miRNA可以在标记之前首先被分离和/或纯化。与样品中的其他RNA在标记之前miRNA未分离或纯化相比,这可以完成更有效标记miRNA的反应。在许多本发明实施方案中,标记是非放射性的。通常,通过加入标记核苷酸(一步法)或者加入核苷酸并标记所加入核苷酸(两步法)可以标记核酸。
A.标记技术
在一些实施方案中,通过向核酸催化性添加已经标记的一种或多种核苷酸,将核酸标记。一种或一种以上标记核苷酸可以添加至miRNA分子。见美国专利6,723,509,其通过参考并入本文。
在其他实施方案中,未标记的一种或多种核苷酸催化性添加至miRNA,并且未标记核苷酸用化学部分修饰,化学部分能够使它在以后被标记。在本发明实施方案中,化学部分是活性胺,从而核苷酸是胺修饰核苷酸。胺修饰核苷酸的实例是本领域技术人员众所周知的,许多可以商业获得,例如从Ambion、Sigma、Jena Bioscience和TriLink获得。
与在cDNA合成过程中标记cDNA不同,标记miRNA的问题是如何标记已经存在的分子。本发明涉及能够使用二-或三-磷酸核糖核苷酸或脱氧核糖核苷酸作为底物的酶用于将底物添加至miRNA的用途。此外,在特别的实施方案中,它包括使用修饰的二-或三-磷酸核糖核苷酸,其被添加至miRNA的3’端。能够添加此类核苷酸的酶包括,但不限于,poly(A)聚合酶、末端转移酶和多核苷酸磷酸化酶。在本发明特别的实施方案中,连接酶不是作为用于添加标记的酶考虑的,并且改为采用非连接酶的酶。末端转移酶催化核苷酸添加至核酸3′末端。多核苷酸磷酸化酶可将核苷酸二磷酸聚合,而无需引物。
B.标记
miRNA或miRNA探针上的标记可以是比色的(包括可见光谱和紫外光谱,包括荧光)、发光的、酶的或发射正电子(包括放射性的)的标记。标记可以直接或间接检测。放射性标记包括125I、32P、33P和35S。酶标记实例包括碱性磷酸酶、萤光素酶、辣根过氧化物酶和β半乳糖苷酶。标记也可以是具有发光特性的蛋白质,例如绿色荧光蛋白和藻红蛋白。
考虑用作缀合物的比色和荧光标记包括,但不限于,Alexa Fluor染料,BODIPY染料,例如BODIPY FL;Cascade Blue;Cascade Yellow;香豆素及其衍生物,例如7-氨基-4-甲基香豆素,氨基香豆素和羟基香豆素;花青染料,例如Cy3和Cy5;曙红和赤藓红;荧光素及其衍生物,例如荧光素异硫氰酸酯;镧系离子大环螯合物,例如Quantum DyeTM;Marina Blue;俄勒冈绿;罗丹明染料,例如罗丹明红,四甲基罗丹明红和罗丹明6G;德克萨斯红;荧光能量转移染料,例如噻唑橙-乙啶异二聚体;和TOTAB。
染料的特定实例包括,但不限于,上面鉴定的那些和下列的那些:Alexa Fluor350、Alexa Fluor 405、Alexa Fluor 430、Alexa Fluor 488、Alexa Fluor 500.AlexaFluor 514、Alexa Fluor 532、Alexa Fluor 546、Alexa Fluor 555、Alexa Fluor 568、Alexa Fluor 594、Alexa Fluor 610、Alexa Fluor 633、Alexa Fluor 647、Alexa Fluor660、Alexa Fluor 680、Alexa Fluor 700、和Alexa Fluor 750;活性胺BODIPY染料、例如BODIPY 493/503、BODIPY 530/550、BODIPY 558/568、BODIPY564/570、BODIPY 576/589、BODIPY 581/591、BODIPY 630/650、BODIPY650/655、BODIPY FL、BODIPY R6G、BODIPY TMR、和BODIPY-TR;Cy3、Cy5、6-FAM、荧光素异硫氰酸酯、HEX、6-JOE、俄勒冈绿488、俄勒冈绿500、俄勒冈绿514、太平洋蓝、REG、罗丹明绿、罗丹明红、Renographin、ROX、SYPRO、TAMRA、2′,4′,5′,7′-(四溴砜荧光素)Tetrabromosulfonefluorescein和TET。
荧光标记的核糖核苷酸的特定实例可以从Molecular Probes获得,并且它们包括Alexa Fluor 488-5-UTP、荧光素-12-UTP、BODIPY FL-14-UTP、BODIPYTMR-14-UTP、四甲基罗丹明红-6-UTP、Alexa Fluor 546-14-UTP、德克萨斯红-5-UTP、和BODIPY TR-14-UTP。其他荧光核糖核苷酸可从AmershamBiosciences获得,例如Cy3-UTP和Cy5-UTP。
荧光标记的脱氧核糖核苷酸实例包括二硝基苯基(DNP)-11-dUTP、CascadeBlue-7-dUTP、Alexa Fluor 488-5-dUTP、荧光素-12-dUTP、俄勒冈绿488-5-dUTP、BODIPY FL-14-dUTP、罗丹明绿-5-dUTP、Alexa Fluor 532-5-dUTP、BODIPYTMR-14-dUTP、四甲基罗丹明红-6-dUTP、Alexa Fluor 546-14-dUTP、Alexa Fluor568-5-dUTP、德克萨斯红-12-dUTP、德克萨斯红-5-dUTP、BODIPY TR-14-dUTP、Alexa Fluor 594-5-dUTP、BODIPY 630/650-14-dUTP、BODIPY 650/665-14-dUTP;Alexa Fluor 488-7-OBEA-dCTP、Alexa Fluor 546-16-OBEA-dCTP、Alexa Fluor594-7-OBEA-dCTP、Alexa Fluor 647-12-OBEA-dCTP。
可以预期到的是核酸可以用两种不同标记标记。此外,荧光共振能量转移(FRET)可以在本发明方法中采用(例如Klostermeier等,2002;Emptage,2001;Didenko,2001,每一文献通过参考并入本文)。
备选地,标记可以不是本身可检测性的,而是可间接检测性的或者允许靶向核酸的分离或分选。例如,标记可以是生物素、地高辛配基、多价阳离子、螯合基和其他配体,包括抗体的配体。
C.可视化技术
容易得到用于可视化或者检测所标记核酸的诸多技术。此类技术包括,但不限于,显微术、阵列、荧光分析法、Light cyclers或其他实时PCR仪器、FACS分析、闪烁计数器、磷像仪、盖革计数器、MRI、CAT、基于抗体的检测方法(Western、免疫荧光、免疫组织化学)、组织化学技术、HPLC(Griffey等,1997)、光谱学、毛细管凝胶电泳(Cummins等,1996)、光谱学、质谱、放射性技术和质量平衡技术。
当采用两个或更多个不同颜色的标记时,可采用荧光共振能量转移(FRET)技术以表征一个或一个以上核酸的结合。此外,本领域普通技术人员完全知道可视化、鉴定和表征所标记核酸的方法,因此此类方法可以用作本发明的部分。还可以使用的工具的实例包括荧光显微术、BioAnalyzer、板阅读器、Storm(Molecular Dynamics)、阵列扫描仪、FACS(荧光激活细胞分选)或具有激发和检测荧光分子能力的任何仪器。
VI.试剂盒
本文所述的任何组合物可以包含在试剂盒中。在非限定性实例中,用于分离miRNA、标记miRNA和/或使用阵列、核酸扩增和/或杂交评估miRNA群体的试剂以及用于从血液样品中制备样品的试剂可以包括在试剂盒内。试剂盒可以进一步包括用于产生或合成miRNA探针的试剂。因此,试剂盒将在适宜容器装置中包含用于通过掺入标记核苷酸或未标记核苷酸(随后标记)标记miRNA的酶。在某些方面,试剂盒可包括扩增试剂。在更多方面,试剂盒可包括不同的支持物,例如玻璃、尼龙、多聚体珠等等,和/或用于偶联任何探针和/或靶核酸的试剂。其还可以包括一种或一种以上的缓冲液,例如反应缓冲液、标记缓冲液、洗涤缓冲液或杂交缓冲液,用于制备miRNA探针的化合物,和用于分离miRNA的成分。本发明的其他试剂盒可包括制造包含miRNA的核酸阵列的成分,并且因此可以包括例如固体支持物。
特别考虑了用于开展本文所述本发明方法的试剂盒。在一些实施方案中,为用于制备多重标记miRNA的试剂盒和用于制备miRNA探针和/或miRNA阵列的试剂盒。在这些实施方案中,试剂盒在适宜容器装置包含下列1、2、3、4、5、6、7、8、9、10、11、12或更多种:(1)poly(A)聚合酶;(2)未修饰核苷酸(G、A、T、C、和/或U);(3)修饰核苷酸(标记或未标记);(4)poly(A)聚合酶缓冲液;和,(5)至少一个微滤膜;(6)可连接至核苷酸的标记;(7)至少一种miRNA探针;(8)反应缓冲液;(9)miRNA阵列或用于制造此阵列的成分;(10)乙酸;(11)醇;(12)用于制备、分离、富集和纯化miRNA或miRNA探针或阵列的溶液。其他试剂包括通常用于处理RNA的那些试剂,例如甲酰胺、上样染料、核糖核酸酶抑制剂和DNA酶。
在特别的实施方案中,本发明的试剂盒包括包含miRNA探针的阵列,如本申请中所描述。阵列可以具有探针,所述探针对应于特定状况下有机体或特定组织或器官的所有已知miRNA或者对应于此类探针的亚组。本发明阵列上的探针亚组可以是或包括经鉴定与特定诊断、治疗或预后应用关联的那些。例如,阵列可包含一种或一种以上探针,所述探针指示或暗示(1)疾病或状况(急性髓性白血病),(2)对特定药物或治疗的易感性或抗性;(3)对药物或物质毒性的易感性;(4)疾病或状况进展或严重性的分级(预后);和(5)对疾病或状况的遗传易感性。
对于包括阵列的任何试剂盒实施方案,可以存在包含或可用于扩增下述序列的核酸分子,所述序列是任何SEQ ID NO:1-267的全部或部分序列的变体、或与之相同或互补。在某些实施方案中,本发明的试剂盒或阵列可包含用于SEQID NO:1-267所确定miRNA的一种或一种以上探针。上述的任何核酸可作为试剂盒的部分应用。
试剂盒的成分可以在水介质中包装或者以冻干形式包装。试剂盒的容器装置通常包括至少一个小瓶、试管、烧瓶、瓶、注射器或其他容器装置,成分可以包装在这些容器中并且优选地适当等分包装在这些容器中。在试剂盒中包含一种以上成分的情况下(标记试剂和标记可以包装在一起),试剂盒还通常包含第二、第三或者其他额外容器,额外的成分可以分开置于这些容器中。然而,可以在小瓶中包含成分的多种组合。本发明试剂盒还代表性地包括包含核酸的装置和商业销售的任何其他密闭的试剂容器。此类容器可包括注塑或吹塑容器,在所述容器中放置期望的小瓶。
当试剂盒的成分以一种和/或更多种液体溶液提供时,液体溶液是水溶液,特别优选无菌水溶液。
然而,试剂和成分可以作为干粉提供。当试剂和/或成分作为干粉提供时,可以通过加入适宜溶剂将粉末重构。可以预期到的是,溶剂还可在另一容器装置中提供。在一些实施方案中,标记染料作为干的粉末提供。可以预期到的是在本发明试剂盒中提供10、20、30、40、50、60、70、80、90、100、120、120、130、140、150、160、170、180、190、200、300、400、500、600、700、800、900、1000μg或者至少或至多这些量的干的染料。然后,染料可以重悬于任何适宜溶剂中,例如DMSO。
此类试剂盒还可以包括帮助分离标记miRNA的成分。其还可以包括保存或维持miRNA或保护免受降解的成分。此类成分可以是无RNA酶的或者免受RNA酶污染。此类试剂盒通常会在适宜装置中包含不同的容器,用于每一个别试剂或溶液。
试剂盒还可以包括说明书,说明试剂盒成分的使用以及试剂盒中未包括的任何其他试剂的使用。说明书可包括可以实现的变动。
本发明的试剂盒还可以包括下列的一种或一种以上:对照RNA;无核酸酶水;无RNA酶容器,例如1.5ml管;无RNA酶洗脱管;PEG或葡聚糖;乙醇;乙酸;乙酸钠;乙酸胺;胍;去污剂;核酸分子量标记物;无RNA酶管尖;和RNA酶或DNA酶抑制剂。
可以预期到的是此类试剂是本发明试剂盒的实施方案。然而,此类试剂盒不限于上面确定的特定事项,并且可以包括用于操作或表征miRNA的任何试剂。
VII.实施例
所附的下列实施例旨在证明本发明的优选实施方案。本领域技术人员应当认识到,以下发明人所发明的代表性技术的实施例中公开的技术良好地实施本发明,并且因此可以考虑构成其优选的实施模式。然而,依据本公开,本领域技术人员应当意识到,对已经公开的特定的实施方案中可以做诸多改变,并且仍然得到同样的或相似的结果,并未脱离本发明的精神和范围。
实施例1:HSA-MIR-20a转染后的基因表达分析
据信miRNA通过结合至靶mRNA转录物并且(1)启动转录物降解或者(2)改变蛋白质从转录物的翻译调节基因表达。导致蛋白质表达上调或下调的翻译调节可产生下游基因产物和基因活性和表达的改变,翻译调节反过来被这些蛋白质调节。这些众多的调节效应显示为整体mRNA表达谱的变化。开展微阵列基因表达分析以鉴定由hsa-miR-20a表达误调节的基因。
合成Pre-miR-20a(Ambion)反向感染进入一式四份的A549细胞样品中,每一份为三个时间点。使用siPORT NeoFX(Ambion)根据厂商的推荐以下列参数转染细胞:在六孔板中每孔200,000个细胞,5.0μl NeoFX,2.5ml中的30nM终浓度的miRNA。细胞在转染后4小时、24小时和72小时收获。使用RNAqueous-4PCR(Ambion)根据厂商推荐的方法提取总RNA。
mRNA阵列分析由Asuragen Services(Austin,TX)根据公司标准操作方法开展。使用MessageAmpTM II-96aRNA扩增试剂盒(Ambion,目录号1819)2μg总RNA用作靶制备和生物素标记。使用Agilent Bioanalyzer 2100毛细管电泳法定量cRNA产量。使用厂商的推荐和下列参数将标记的靶与Affymetrix mRNA阵列(人HG-U133A 2.0阵列)杂交。杂交在Affymetrix Model 640杂交箱于45℃开展16小时。在Affymetrix FS450 Fluidics站上洗涤阵列并着色,运行洗涤脚本Midi_euk2v3_450。阵列在Affymetrix GeneChip扫描仪3000上扫描。图像信号资料的概括信息、组平均值、带有显著性标志的p值、log比值和阵列上每一基因的基因注释使用Affymetrix统计学算法MAS 5.0(GCOS v1.3)产生。数据报道于包含Affymetrix数据和结果的文件(cabinet)和包含阵列最初图像和处理后单元强度的文件(.cel)中。数据针对两种阴性对照微RNA序列的平均观察效果标准化,然后一起平均后给出结果。其表达水平比平均阴性对照变化至少0.7log2的一列基因组合在一起。微阵列基因表达分析结果示于上表1。
对表1所列基因的表达水平的的操纵代表着对癌症和其他疾病(其中hsa-miR-20a的表达增加或降低在疾病中发挥作用)的潜在有用的治疗法。
实施例2:HSA-MiR-20a影响的细胞途径
hsa-miR-20a对基因表达的误调节(表1)影响许多细胞途径,这些细胞途径代表着控制癌症和其他疾病和紊乱的潜在治疗靶。发明人确定了被hsa-miR-20a表达诱导的调节性级联所影响的细胞遗传途径的身份和性质。细胞途径分析使用Ingenuity Pathways Analysis(Systems,Redwood City,CA)开展。在A549细胞中受hsa-miR-20a过表达影响最显著的途径示于上表2。
这些数据证明,hsa-miR-20a直接或间接影响众多细胞生长、细胞增殖、细胞信号转导和细胞发育相关基因的表达,并且因此主要影响与细胞生长、细胞发育和细胞增殖相关的功能途径。这些细胞过程在多种癌症的发展和进展中全部具有整合作用。对表2所示细胞途径中的基因表达水平的操纵代表着对癌症和其他疾病(其中hsa-miR-20a的表达增加或降低在疾病中发挥作用)的潜在有用的治疗法。
实施例3:预测的HSA-MIR-20a基因靶标
结合hsa-miR-20a并被hsa-miR-20a调节的基因靶使用专有算法miRNATargetTM(Asuragen)预测并示于上表3。
表现出在转染pre-miR hsa-miR-20a后的人癌细胞中mRNA表达水平改变的预测的基因靶示于上表4。
预测的其mRNA表达水平受hsa-miR-20a影响的hsa-miR-20a的基因靶,代表着用于通过控制它们的表达水平进行癌症治疗和其他疾病治疗的特别有用的候选物。
实施例4:HSA-MIR-20a改变的癌症相关基因表达
细胞增殖和存活途径通常在肿瘤中改变(Hanahan和Weinberg,2000)。发明人已经显示,hsa-miR-20a直接或间接调节在这些途径的调节中至关重要的蛋白质的转录物。这些靶中多数具有先天的致癌活性或肿瘤抑制活性。与多种癌症关联的Hsa-miR-20a靶示于表5。
特别感兴趣的Hsa-miR-20a靶是在调节细胞内信号转导中起作用的基因以及它们的产物。当去调节之后,这些蛋白质中的许多蛋白质促成了体外和体内恶性表型。Hsa-miR-20a在多个层面影响细胞内信号转导并且控制着分泌的生长因子、跨膜生长因子受体和细胞质信号传导分子的表达。受hsa-miR-20a调节的分泌蛋白质的实例是Eregulin(EREG)、Wnt5a和炎性趋化因子IL-8。Eregulin(EREG)属于表皮生长因子(EGF)家族并且结合EGF受体,如ErbB(Shelly等,1998)。Eregulin在成年组织中罕见表达但是在多种癌症类型中表达提高(Toyoda等,1997)。Eregulin还在肿瘤发生中起直接作用,因为其促进结肠癌症细胞的肿瘤形成(Baba等,2000)。由于转染hsa-miR-20a降低EREG转录物水平,hsa-miR-20a可能干涉Eregulin的致癌活性。Wnt家族成员是作为生长因子起作用的半胱氨酸丰富蛋白质。在发育过程中,Wnt5a在胚胎神经系统的模式决定中起作用,并且Wnt5a与黑素瘤的进展和乳腺导管癌相联系(Jonsson等,2002;Weeraratna等,2002)。hsa-miR-20a靶向的跨膜受体包括血小板衍生生长因子受体样(PDGFR-L,也称作PDGF-受体β样肿瘤抑制物,PRLTS)、转化生长因子β(TGF-β)受体2(TGFBR2)、肿瘤坏死因子相关细胞凋亡诱导物配体(TRAIL)受体2(TRAIL-R2;也称作肿瘤坏死因子受体超家族成员B10;TNFSFB10)、视黄酸受体效应器1(RARRES1)、肝配蛋白B2受体(EphB2)和成纤维细胞生长因子受体(FGFR)3和4。FGFR-3和FGFR-4通常在多种癌症类型中过表达并且表现出具有生血管活性(Chandler等,1999)。与之相反,PDGFR-L、TRAIL-R2、RARRES1和TGFBR-2是假定的肿瘤抑制物。PDGFR-L表现出在广泛多种癌症中功能缺失,这或者是通过杂合性缺失(LOH)或者是通过错义和移码突变(Fujiwara等,1995;Komiya等,1997)。TRAIL-R2与TRAIL相互作用并且刺激多种细胞类型中的促凋亡途径(Fesik,2005)。对应基因位于在多种人肿瘤中LOH频繁部位的染色体区域(8p22-23)(Adams等,2005)。因此,TRAIL-R2缺失可促成这些癌症的恶性表型。RARRES1是跨膜蛋白质,其在几种类型癌症中缺失或者表达水平降低(Wu等,2006a及其中的参考文献)。TGFBR-2与TGFBR-1形成功能性复合体并且是TGF-β的主要受体(Massague等,2000)。TGF-β的中心作用是抑制众多细胞类型,例如上皮细胞、内皮细胞、造血细胞、神经细胞和间充质细胞的细胞生长。许多带有微卫星不稳性的乳腺癌和结直肠癌具有TGFBR-2失活突变,并且因此没有TGF-β的生长抑制性功能(Markowitz等,1995;Lucke等,2001)。肝配蛋白B2受体在前列腺和结直肠癌中具有抑制蛋白阻抑制因子作用,因为EphB2的失活加速了肿瘤形成(Guo等,2006)。受hsa-miR-20a调节的细胞质信号传导分子包括RhoC和磷脂酶Cβ-1(PLCβ-1)。RhoC是小GTP酶,其调节正常细胞的细胞运动并且在肿瘤发生过程中促进转移(Wheeler和Ridley,2004;Wu等,2004b)。因此,随着肿瘤变成更强力转移性的,RhoC水平进行性提高。PLCβ-1催化由磷脂酰肌醇二磷酸(PIP2)产生肌醇-1,4,5-三磷酸(IP3)和二酰基甘油(DAG),调节增殖性信号和细胞周期检验点(Lo Vasco等,2004)。
受hsa-miR-20a调节的另一类基因编码转录因子。在这些转录因子中有碱性区域/亮氨酸拉链蛋白质(bZIP)Jun和CCAAT/增强子结合蛋白δ(C/EBPδ),前者是禽癌蛋白质v-Jun的细胞同系物(Maki等,1987)。Hsa-miR-20a还调节转录因子ETS2,其是最初从转化成红细胞增多症病毒E26分离的癌蛋白质v-Ets的哺乳动物同系物(Leprince等,1983)。相应ETS2基因在急性髓性白血病(AML)中频繁遭受染色体易位并且在疾病进展中至关重要(Sacchi等,1986)。外源引入hsa-miR-20a诱导ID4表达增加(DNA结合抑制剂4),ID4是一种潜在的肿瘤抑制物,其在白血病中通过甲基化被选择性沉默(Yu等,2005)。ID4带有螺旋-环-螺旋结构域但是缺乏完整的DNA结合结构域。因此,ID4作为对其他HLH转录因子,例如在绝大多数人癌症中被去调节的c-Myc的显性负调控起作用(Grandori等,2000;Nesbit等,1999)。
被hsa-miR-20a调节的更多的生长相关基因是细胞周期蛋白D1和G1,以及S期激酶相关蛋白2(Skp2)。细胞周期蛋白是细胞周期蛋白依赖性激酶(CDK)的辅因子,并且在细胞周期进程中起作用。细胞周期蛋白D1是从G1期过渡到S期所必需的并且在众多癌症类型中过表达(Donnellan和Chetty,1998)。Hsa-miR-20a负向调节细胞周期蛋白D1表达并且因此可以干扰依赖于高水平细胞周期蛋白D1的异常细胞生长。与之相反,细胞周期蛋白G1具有生长抑制性活性并且被hsa-miR-20a上调(Zhao等,2003)。Skp2是多亚基E3遍在蛋白连接酶复合体的成分,该复合体将蛋白质标记以便通过蛋白酶体降解。充分表征的靶是CDK抑制剂p27,其为Skp2的细胞周期促进活性提供了解释(Carrano等,1999)。Skp2是固有致癌性的并且在多种癌症类型中表现出水平增加(Gstaiger等,2001;Kamata等,2005;Saigusa等,2005;Einama等,2006)。
总之,hsa-miR-20a控制着本身为细胞增殖和存活的关键调节物的蛋白质的活性。这些靶常常在人癌症中去调节。基于受miR-20a调节的基因和相关途径的这种评论,向多种癌症细胞类型中引入hsa-miR-20a或anti-hsa-miR-20a将会产生治疗反应。
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美国专利5,543,158
美国专利5,545,531
美国专利5,547,839
美国专利5,554,501
美国专利5,554,744
美国专利5,556,752
美国专利5,561,071
美国专利5,571,639
美国专利5,574,146
美国专利5,580,726
美国专利5,580,732
美国专利5,583,013
美国专利5,593,839
美国专利5,599,672
美国专利5,599,695
美国专利5,602,240
美国专利5,602,244
美国专利5,610,289
美国专利5,610,287
美国专利5,614,617
美国专利5,623,070
美国专利5,624,711
美国专利5,631,134
美国专利5,637,683
美国专利5,639,603
美国专利5,641,515
美国专利5,645,897
美国专利5,652,099
美国专利5,654,413
美国专利5,658,734
美国专利5,661,028
美国专利5,665,547
美国专利5,667,972
美国专利5,670,663
美国专利5,672,697
美国专利5,677,195
美国专利5,681,947
美国专利5,695,940
美国专利5,700,637
美国专利5,700,922
美国专利5,705,629
美国专利5,708,153
美国专利5,708,154
美国专利5,714,606
美国专利5,728,525
美国专利5,739,169
美国专利5,744,305
美国专利5,760,395
美国专利5,763,167
美国专利5,770,358
美国专利5,777,092
美国专利5,789,162
美国专利5,792,847
美国专利5,800,992
美国专利5,801,005
美国专利5,807,522
美国专利5,824,311
美国专利5,830,645
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美国专利5,876,932
美国专利5,886,165
美国专利5,919,626
美国专利5,922,591
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美国专利6,040,193
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美国专利6,087,102
美国专利6,251,666
美国专利6,368,799
美国专利6,383,749
美国专利6,617,112
美国专利6,638,717
美国专利6,720,138
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美国专利序列号10/667,126
美国专利序列号11/141,707
美国专利序列号11/273,640
美国专利序列号11/349,727
美国专利序列号60/575,743
美国专利序列号60/649,584
美国专利序列号60/650,807
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序列表
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麦克.拜罗姆
查尔斯.D.约翰逊
大卫.布朗
<120>作为治疗性干预靶标的miR-20调节的基因和途径
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<223>合成的引物
<400>40
gaguuugucc uggcaguucc aaagugcuca cagugcaggu agugccagug gaucuacugc 60
aaugucugca cuucaaguau ugccggacgc cuuc 94
<210>41
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>41
agcaguauua aagugcuuau agugcaggua guuacugaug gucuacugca gugugagcac 60
uucuaguacu ucuagaugca 80
<210>42
<211>98
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>42
ugacagcucu uguagcacua aagugcuuau agugcaggua guguucacua aucuacugca 60
uuauaagcac uuaaaguacu gcuagcugua gaacuaca 98
<210>43
<211>85
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>43
cuagcaguau caaagugcuc auagugcagg uagcuuggca uuggaccuac uguaaugugg 60
gcacuuacag uacuguuaga uaaag 85
<210>44
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>44
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>45
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>45
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau caugagcacu 60
uaaaguacug c 71
<210>46
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>46
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>47
<211>102
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>47
ugaaaggaca gcuuuuguag cacuaaagug cuuauagugc agguaguguu uaguuaucua 60
cugcauuaug agcacuugaa guacugcuag cuguagaacu ac 102
<210>48
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>48
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>49
<211>107
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>49
gugugaugug acagcuucug uagcacuaaa gugcuuauag ugcagguagu guguagccau 60
cuacugcauu acgagcacuu aaaguacugc cagcuguaga acuccag 107
<210>50
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>50
ccuaguagug ccaaagugcu cauagugcag guaguuuuua uaccacucua cugcagugug 60
agcacuucua guacuccugg 80
<210>51
<211>142
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>51
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug cuguucuaag gugcaucuag ugcagauagu gaaguagauu agcaucuacu 120
gcccuaagug cuccuucugg ca 142
<210>52
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>52
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>53
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>53
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>54
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>54
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>55
<211>85
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>55
cagcuucugu agcacuaaag ugcuuauagu gcagguagug ugucgucauc uacugcauua 60
cgagcacuua caguacugcc agcug 85
<210>56
<211>72
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>56
guagugccaa agugcucaua gugcagguag guuuugcugc acucuacugc agugugagca 60
cuucugguac uc 72
<210>57
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>57
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>58
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>58
guagcacuaa agugcuuaua gugcagguag uguuuaguua ucuacugcau uaugagcacu 60
uaaaguacug c 71
<210>59
<211>73
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>59
gcaguauuaa agugcuuaua gugcagguag uuuucucagg gucuacugca guaugagcac 60
uucuaguacu ucu 73
<210>60
<211>74
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>60
gcaguuccaa agugcucaua gugcagguag uuguauucau guucuacugu aauaugggca 60
cuuacaguac ugcu 74
<210>61
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>61
gcuaaagugg ugcuaaagug cuuauagugc agguaguuuu ucuguauucu acugcauaau 60
gagcacuuaa aguacuccua gcug 84
<210>62
<211>74
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>62
gcaguuccaa agugcucaua gugcagguag uuguauugau guucuacugu aauaugggca 60
cuuacaguac ugcu 74
<210>63
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>63
aaaagugcuu acagugcagg uagc 24
<210>64
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>64
uaaagugcug acagugcaga u 21
<210>65
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>65
acugcaguga aggcacuugu 20
<210>66
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>66
caaagugcuu acagugcagg uagu 24
<210>67
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>67
uaaggugcau cuagugcaga ua 22
<210>68
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>68
aaagugcugu ucgugcaggu ag 22
<210>69
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>69
aaaagu gcuu acagugcagg ua 22
<210>70
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>70
acugcaguga aggcacuugu 20
<210>71
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>71
caaagugcuu acagugcagg uagu 24
<210>72
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>72
uaaggugcau cuagugcaga ua 22
<210>73
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>73
uaaggugcau cuagugcagu ua 22
<210>74
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>74
caaagugcug uucgugcagg ua 22
<210>75
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>75
caaagugcuu acagugcagg ua 22
<210>76
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>76
acugcagugg aggcacuucu ag 22
<210>77
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>77
uaaggugcau cuagugcaga ua 22
<210>78
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>78
uaaggugcau uuagugcaga ua 22
<210>79
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>79
cugcccuaag ugccccuucu gg 22
<210>80
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>80
uaaggugcau cuuguguagu ua 22
<210>81
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>81
aaaagugcug uuugugcagg ua 22
<210>82
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>82
caaagugcuu acagugcagg ua 22
<210>83
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>83
uaaggugcau cuagugcaga ua 22
<210>84
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>84
aaaagugcuu acagugcagg ua 22
<210>85
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>85
acugcaguga aggcacuugu 20
<210>86
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>86
caaagugcuu acagugcagg uagu 24
<210>87
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>87
uaaggugcau cuagugcaga ua 22
<210>88
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>88
uaaggugcau cuagugcagu ua 22
<210>89
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>89
aaaagugcuu acagugcagg uagc 24
<210>90
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>90
uaaagugcug acagugcaga u 21
<210>91
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>91
acugcaguga aggcacuugu 20
<210>92
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>92
caaagugcuu acagugcagg uagu 24
<210>93
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>93
uaaggugcau cuagugcaga ua 22
<210>94
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>94
aaagugcugu ucgugcaggu ag 22
<210>95
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>95
aaaagugcuu acagugcagg uagc 24
<210>96
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>96
uaaagugcug acagugcaga u 21
<210>97
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>97
acugcaguga aggcacuugu 20
<210>98
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>98
caaagugcuu acagugcagg uagu 24
<210>99
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>99
uaaggugcau cuagugcaga ua 22
<210>100
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>100
acugcccuaa gugcuccuuc u 21
<210>101
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>101
uaaggugcau cuagugcagu ua 22
<210>102
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>102
aaagugcugu ucgugcaggu ag 22
<210>103
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>103
acugcaguga aggcacuugu 20
<210>104
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>104
caaagugcuu acagugcagg uagu 24
<210>105
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>105
uaaggugcau cuagugcaga ua 22
<210>106
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>106
uaaagugcug acagugcaga u 21
<210>107
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>107
acugcaguga aggcacuugu 20
<210>108
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>108
caaagugcuu acagugcagg uagu 24
<210>109
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>109
uaaggugcau cuagugcaga ua 22
<210>110
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>110
aaagugcugu ucgugcaggu ag 22
<210>111
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>111
acugcaguga aggcacuugu a 21
<210>112
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>112
caaagugcuu acagugcagg uagu 24
<210>113
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>113
uaaggugcau cuagugcaga ua 22
<210>114
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>114
aaagugcugu ucgugcaggu ag 22
<210>115
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>115
aaaagu gcuu acagugcagg uagc 24
<210>116
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>116
uaaagugcug acagugcaga u 21
<210>117
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>117
acugcaguga aggcacuugu 20
<210>118
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>118
caaagugcuu acagugcagg uagu 24
<210>119
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>119
uaaggugcau cuagugcaga ua 22
<210>120
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>120
aaagugcugu ucgugcaggu ag 22
<210>121
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>121
caaagugcua acagugcagg ua 22
<210>122
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>122
uaaagugcug acagugcaga u 21
<210>123
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>123
acugcaguga gggcacuugu a 21
<210>124
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>124
caaagugcuu acagugcagg uagu 24
<210>125
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>125
uaaggugcau cuagugcaga ua 22
<210>126
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>126
caaagugcug uucgugcagg uag 23
<210>127
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>127
aaaagugcuu acagugcagg uagc 24
<210>128
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>128
uaaagugcug acagugcaga u 21
<210>129
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>129
acugcaguga aggcacuugu 20
<210>130
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>130
caaagugcuu acagugcagg uagu 24
<210>131
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>131
uaaggugcau cuagugcaga ua 22
<210>132
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>132
aaagugcugu ucgugcaggu ag 22
<210>133
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>133
aaaagugcuu acagugcagg uagc 24
<210>134
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>134
uaaagugcug acagugcaga u 21
<210>135
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>135
acugcaguga aggcacuugu 20
<210>136
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>136
caaagugcuu acagugcagg uagu 24
<210>137
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>137
uaaggugcau cuagugcaga ua 22
<210>138
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>138
aaagugcugu ucgugcaggu ag 22
<210>139
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>139
aaaagugcuu acagugcagg uagc 24
<210>140
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>140
uaaagugcug acagugcaga u 21
<210>141
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>141
acugcaguga aggcacuugu 20
<210>142
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>142
caaagugcuu acagugcagg uagu 24
<210>143
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>143
uaaggugcau cuagugcaga ua 22
<210>144
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>144
aaagugcugu ucgugcaggu ag 22
<210>145
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>145
aaaagugcuu acagugcagg uagc 24
<210>146
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>146
uaaagugcug acagugcaga u 21
<210>147
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>147
acugcaguga aggcacuugu 20
<210>148
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>148
caaagugcuu acagugcagg uagu 24
<210>149
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>149
uaaggugcau cuagugcaga ua 22
<210>150
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>150
aaagugcugu ucgugcaggu ag 22
<210>151
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>151
uaaagugcug acagugcaga u 21
<210>152
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>152
caaagugcuu acagugcagg uagu 24
<210>153
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>153
uaaggugcau cuagugcaga ua 22
<210>154
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>154
caaagugcug uucgugcagg uag 23
<210>155
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>155
aaaagugcuu acagugcagg uagc 24
<210>156
<211>21
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>156
uaaagugcug acagugcaga u 21
<210>157
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>157
acugcaguga aggcacuugu 20
<210>158
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>158
caaagugcuu acagugcagg uagu 24
<210>159
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>159
uaaggugcau cuagugcaga ua 22
<210>160
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>160
aaagugcugu ucgugcaggu ag 22
<210>161
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>161
aaaagugcuu acagugcagg uagc 24
<210>162
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>162
uaaggugcau cuagugcaga ua 22
<210>163
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>163
caaagugcuu acagugcagg ua 22
<210>164
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>164
uaaggugcau cuagugcaga ua 22
<210>165
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>165
uaaggugcau cuagugcagu uag 23
<210>166
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>166
caaagugcuc auagugcagg uag 23
<210>167
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>167
aaaagugcuu auagugcagg uaga 24
<210>168
<211>20
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>168
acugcagu ga aggcacuugu 20
<210>169
<211>24
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>169
caaagugcuu acagugcagg uagu 24
<210>170
<211>22
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>170
uaaggugcau cuagugcaga ua 22
<210>171
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>171
uaaggugcau cuagugcagu uag 23
<210>172
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>172
caaagugcug uucgugcagg uag 23
<210>173
<211>23
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>173
ucaagugcug uucgugcagg uag 23
<210>174
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>174
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>175
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>175
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>176
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>176
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>177
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>177
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>178
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>178
cugggggcuc caaagugcug uucgugcagg uagugugauu accugaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>179
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>179
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>180
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>180
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>181
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>181
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>182
<211>43
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>182
cuuguguuaa ggugcaucua gugcaguuag ugaagcagcu cag 43
<210>183
<211>77
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>183
cugggggcuc caaagugcug uucgugcagg uagugugauc accugaccua cugcugagcc 60
agcacuuccc gagcccc 77
<210>184
<211>138
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>184
ggacuuucuu gaguggacuu gguugguguc aauguauugu caaagugcuu acagugcagg 60
uaguauuaug gaauaucuac ugcaguggag gcacuucuag caauacacuu gaccauuuua 120
accuuccucc aggcaucc 138
<210>185
<211>83
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>185
gucacuguag ugucaaagug cuuacagugc agguaguuca auauaaucua cugcagugga 60
ggcacuucaa gcuuuaccgu gac 83
<210>186
<211>83
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>186
ggcuuugugc uaaggugcau cuagugcaga uagugaagua gacuagcacc uacugcccua 60
agugcuccuu cuggcacgag ggu 83
<210>187
<211>87
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>187
uacugcuuau gcuaaggugc auuuagugca gauagugaaa uagacuagca ccuacugccc 60
uaagugcccc uucuggcaua aggggcu 87
<210>188
<211>85
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>188
gccuuccugc uaaggugcau cuuguguagu uagugaagua gucuaguauc uacugcgcua 60
gauguuccuu uuggcaggag uagcu 85
<210>189
<211>74
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>189
guguguguua aaagugcugu uugugcaggu aguguguuuc cucuacugua ggagcagcac 60
uucacaacac acac 74
<210>190
<211>86
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>190
gucuguguau ugccaaagug cuuacagugc agguaguucu augugacacc uacugcaaug 60
gaggcacuua cagcaguacu cuugac 86
<210>191
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>191
gucaaaguag ugucaaagug cuuacagugc agguaguuug augacaucua cugcagugaa 60
ggcacuuuca gcgcuauucu ga 82
<210>192
<211>76
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>192
uugugcuaag gugcaucuag ugcagauagu gaaauagacu agcaccuacu gcccuaagug 60
cuccuucugg cauaag 76
<210>193
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>193
ccuugaguug ugcaaaagug cuuacagugc agguagagcu cagcaccuac ugcaguauaa 60
gcacuucugg caugaccgug g 81
<210>194
<211>85
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>194
gucagaguaa ugucaaagug cuuacagugc agguagugau auauagaacc uacugcagug 60
aaggcacuug uagcauuaug uugac 85
<210>195
<211>93
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>195
gugcuuuuug uacuaaggug caucuagugc agauagugaa guagauuagc aucuacugcc 60
cuaagugcuc cuucuggcau aagaaguuau guc 93
<210>196
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>196
cgugguccuu guguuaaggu gcaucuagug caguuaguga cguagcguag aaucuacugc 60
ccuaaaugcu ccuucuggca caag 84
<210>197
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>197
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>198
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>198
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>199
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>199
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>200
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>200
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>201
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>201
cugggggcuc caaagugcug uucgugcagg uagugugauu acccgaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>202
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>202
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaauguaa 60
gcacuucuua cauuaccaug g 81
<210>203
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>203
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>204
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>204
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>205
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>205
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>206
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>206
uguguuaagg ugcaucuagu gcaguuagug aagcagcuua gaaucuacug cccuaaaugc 60
cccuucuggc a 71
<210>207
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>207
cugggggcuc caaagugcug uucgugcagg uagugugauu acccaaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>208
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>208
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>209
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>209
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>210
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>210
ccugccgggg cuaaagugcu gacagugcag auaguguccu cuccgugcua ccgcacugug 60
gguacuugcu gcuccagcag g 81
<210>211
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>211
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>212
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>212
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>213
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>213
cucggggcuc caaagugcug uucgugcagg uagugugauu accugaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>214
<211>85
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>214
gucagaauaa ugucaaagug cuuacagugc agguagugau auguagaauc uacugcagug 60
aaggcacuug uagcauuaua gugac 85
<210>215
<211>72
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>215
uuguucuaag gugcaucuag ugcagauagu gaaguagauu agcaucuacu gcccuaagug 60
cuccuucugg ca 72
<210>216
<211>89
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>216
agucuugggg ggcuccaaag ugcuguucgu gcagguagug ugauaaccug accuacugcu 60
gagcuagcac uuccagagcc ccugggaca 89
<210>217
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>217
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>218
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>218
ccugcugggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>219
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>219
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>220
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>220
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>221
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>221
cugggggcuc caaagugcug uucgugcagg uagugugauu aaccgaccua cugcugagcu 60
agcacuuccc gagcccccag 80
<210>222
<211>65
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>222
augucaaagu gcuaacagug cagguagcuu uuugaguucu acugcagugc cagcacuucu 60
uacau 65
<210>223
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>223
ccugcuggga cuaaagugcu gacagugcag auaguggucc ucucugugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>224
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>224
gucagaauaa ugucaaagug cuuacagugc agguagugau gugugcaucu acugcaguga 60
gggcacuugu agcauuaugc ugac 84
<210>225
<211>96
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>225
ugcgugcuuu uuguucuaag gugcaucuag ugcagauagu gaaguagacu agcaucuacu 60
gcccuaagug cuccuucugg cauaagaagu uauguc 96
<210>226
<211>88
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>226
agucaugggg gcuccaaagu gcuguucgug cagguagugu aauuaccuga ccuacugcug 60
agcuagcacu ucccgagccc ccaggaca 88
<210>227
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>227
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>228
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>228
ccugcugggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>229
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>229
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>230
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>230
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>231
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>231
cugggggcuc caaagugcug uucgugcagg uagugugauu aaccgaccua cugcugagcu 60
agcacuuccc gagcccccag 80
<210>232
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>232
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>233
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>233
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>234
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>234
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>235
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>235
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>236
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>236
cugggggcuc caaagugcug uucgugcagg uagugugauu acccgaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>237
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>237
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>238
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>238
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>239
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>239
gucagaauaa ugucaaagug cuuacagugc agguagugau acgugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>240
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>240
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>241
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>241
cugggggcuc caaagugcug uucgugcagg uagugugauu acccgaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>242
<211>81
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>242
ccuuggccau guaaaagugc uuacagugca gguagcuuuu ugagaucuac ugcaaugcaa 60
gcacuucuua cauuaccaug g 81
<210>243
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>243
ccugccgggg cuaaagugcu gacagugcag auaguggucc ucuccgugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>244
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>244
gucagaauaa ugucaaagug cuuacagugc agguagugau augugcaucu acugcaguga 60
aggcacuugu agcauuaugg ugac 84
<210>245
<211>71
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>245
uguucuaagg ugcaucuagu gcagauagug aaguagauua gcaucuacug cccuaagugc 60
uccuucuggc a 71
<210>246
<211>80
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>246
cugggggcuc caaagugcug uucgugcagg uagugugauu acccgaccua cugcugagcu 60
agcacuuccc gagcccccgg 80
<210>247
<211>82
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>247
ccugcuggga cuaaagugcu gacagugcag auaguggucc ucucugugcu accgcacugu 60
ggguacuugc ugcuccagca gg 82
<210>248
<211>84
<212>RNA
<213>人工的
<220>
<223>合成的引物
<400>248
gucaggauaa ugucaaagug cuuacagugc agguaguggu gugugcaucu acugcaguga 60
aggcacuugu ggcauugugc ugac 84
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Claims (46)
1.调节细胞中基因表达的方法,包括向细胞施用一定量分离的核酸,所述一定量分离的核酸包含足以调节表1、3、4或5中所鉴定一个或一个以上基因表达的量的miR-20核酸序列。
2.权利要求1的方法,其中细胞位于患有、怀疑患有或者有危险发展成代谢性、免疫性、传染性、心血管、消化性、内分泌、眼、泌尿生殖、血液、肌肉骨骼、神经系统、先天性、呼吸、皮肤或癌性疾病或状况的受试者内。
3.权利要求2的方法,其中传染性疾病或状况是寄生虫、细菌、病毒或真菌感染。
4.权利要求2的方法,其中癌性状况是其中调节一个或一个以上基因足以引起治疗反应的星形细胞瘤、急性髓性白血病、乳腺癌、膀胱癌、宫颈癌、结直肠癌、子宫内膜癌、食管鳞状细胞癌、神经胶质瘤、成胶质细胞瘤、胃癌、肝细胞癌、霍奇金淋巴瘤、白血病、脂肪瘤、黑素瘤、套细胞淋巴瘤、粘液纤维肉瘤、多发性骨髓瘤、神经母细胞瘤、非霍奇金淋巴瘤、肺癌、非小细胞肺癌、卵巢癌、食管癌、骨肉瘤、胰腺癌、前列腺癌、头颈部鳞状细胞癌、甲状腺癌、尿路上皮癌。
5.权利要求1的方法,其中基因表达被下调。
6.权利要求1的方法,其中细胞是上皮细胞、基质细胞或黏膜细胞。
7.权利要求1的方法,其中细胞是脑细胞、神经元细胞、血液细胞、食管细胞、肺细胞、心血管细胞、肝细胞、乳腺细胞、骨细胞、甲状腺细胞、腺细胞、肾上腺细胞、胰细胞、胃细胞、肠细胞、肾细胞、膀胱细胞、前列腺细胞、子宫细胞、卵巢细胞、睾丸细胞、脾细胞、皮肤细胞、平滑肌细胞、心肌细胞、横纹肌细胞。
8.权利要求1的方法,其中细胞是癌症细胞。
9.权利要求8的方法,其中癌症细胞是神经元细胞、神经胶质细胞、肺细胞、肝细胞、脑细胞、乳腺细胞、膀胱细胞、血液细胞、白血病细胞、结肠细胞、子宫内膜细胞、胃细胞、皮肤细胞、卵巢细胞、脂肪细胞、骨细胞、宫颈细胞、食管细胞、胰细胞、前列腺细胞、肾细胞或甲状腺细胞。
10.权利要求1的方法,其中分离的miR-20核酸是重组核酸。
11.权利要求10的方法,其中重组核酸是RNA。
12.权利要求10的方法,其中重组核酸是DNA。
13.权利要求12的方法,其中重组核酸包含miR-20表达盒。
14.权利要求13的方法,其中表达盒包含在病毒载体或质粒DNA载体中。
15.权利要求14的方法,其中病毒载体以每一剂量1×105至1×1014个病毒颗粒的剂量施用或者质粒DNA载体以每一患者100mg至每一患者4000mg的剂量施用。
16.权利要求1的方法,其中miR-20核酸是合成的核酸。
17.权利要求16的方法,其中核酸是以0.01mg/kg体重至10mg/kg体重的剂量施用。
18.权利要求1的方法,其中miR-20是hsa-miR-20。
19.权利要求1的方法,其中miR-20是miR-20a。
20.权利要求1的方法,其中核酸是肠内或肠胃外施用。
21.权利要求20的方法,其中肠内施用是口服。
22.权利要求20的方法,其中肠胃外施用是血管内施用、颅内施用、胸膜内施用、瘤内施用、腹膜内施用、肌内施用、淋巴内施用、腺内施用、皮下施用、局部施用、支气管内施用、气管内施用、鼻内施用、吸入施用或滴注施用。
23.权利要求1的方法,其中核酸是包含在药物制剂中。
24.权利要求23的方法,其中药物制剂是脂质组合物。
25.调节细胞途径或者生理途径的方法,包括向细胞施用一定量的分离的核酸,所述分离的核酸包含足以调节细胞途径或者生理途径量的miR-20核酸序列,细胞途径或者生理途径包含表1、3、4或5中所鉴定的一个或一个以上基因或者与表1、3、4或5中所鉴定的一个或一个以上基因相关的基因产物。
26.权利要求25的方法,还包括施用2、3、4、5、6或更多个miRNA。
27.权利要求26的方法,其中miRNA包含在单一组合物中。
28.权利要求23的方法,其中至少两个细胞途径或者生理途径被调节。
29.权利要求26的方法,其中至少一个基因被多个miRNA调节。
30.权利要求25的方法,其中基因表达或基因产物被下调。
31.权利要求25的方法,其中基因表达或基因产物被上调。
32.权利要求25的方法,其中细胞是癌症细胞。
33.权利要求32的方法,其中细胞活力降低,细胞增殖减少,细胞转移减少或者细胞对治疗的敏感性增加。
34.权利要求32的方法,其中癌症细胞是神经元细胞、神经胶质细胞、肺细胞、肝细胞、脑细胞、乳腺细胞、膀胱细胞、血液细胞、白血病细胞、结肠细胞、子宫内膜细胞、胃细胞、皮肤细胞、卵巢细胞、脂肪细胞、骨细胞、宫颈细胞、食管细胞、胰细胞、前列腺细胞、肾细胞或甲状腺细胞。
35.权利要求25的方法,其中分离的miR-20核酸是重组核酸。
36.权利要求35的方法,其中重组核酸是DNA。
37.权利要求36的方法,其中重组核酸是病毒载体或质粒DNA载体。
38.权利要求25的方法,其中miR-20a核酸是合成核酸。
39.治疗诊断患有或者怀疑患有或者怀疑发展成与miRNA所调节基因相关病理状况或疾病的患者的方法,包括步骤:
(a)向患者施用一定量分离的核酸,所述一定量分离的核酸包含足以调节细胞途径或者生理途径的量的miR-20核酸序列;和
(b)施用第二治疗法,其中细胞途径或者生理途径的调节使患者对第二治疗法敏感。
40.权利要求39的方法,其中一个或一个以上细胞途径或者生理途径包含表1、3、4或5中鉴定的一个或一个以上基因。
41.选择待向患有、怀疑患有或者倾向发展成病理状况或者疾病的受试者施用的miRNA的方法,包括:
(a)确定选自表1、3、4或5的一个或一个以上基因的表达谱;
(b)基于表达谱评估受试者对miRNA治疗的敏感性;和
(c)基于所评估的敏感性选择一个或一个以上miRNA。
42.权利要求41的方法,还包括用1、2、4、5、6、7、8、9、10或更多个miRNA治疗受试者。
43.权利要求42的方法,其中每一miRNA单独施用或者一种或一种以上组合施用。
44.权利要求43的方法,其中miRNA在单一组合物中。
45.评估细胞、组织或者受试者的方法,包括在至少一个样品中评估miR-20的表达与评估来自表1、3、4或5的一个或一个以上基因的表达相联合。
46.评估样品中miR-20状态的方法,包括步骤:
(a)评估样品中来自表1、3、4或5的一个或一个以上基因的表达;和
(b)基于样品中miR-20表达水平确定miR-20状态。
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