Advanced Method of Optimization (2022 Spring)

.m, .MAT, .PDF, .XLS files for "Canonical host-pathogen tradeoffs subverted by mutations with dual benefits"

Study of metrics of cophylogentic signal

R and Stan code for the manuscript "Coevolution of Religious and Political Authority in Austronesian Societies"

Simulation code for the manuscript "Superinfection and the coevolution of parasite virulence and host recovery rate

Framework for exploring multiple population coevolution

AutoCoEv

Optimization of organic chemistry catalysts using the coevolution approach

GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!

Evolutionary based training implementation for intelligent checkers

Library that provides building block more advanced genetic algorithms suitable mutliobjective optimization

A tool for multiscale forward-time simulation of protein evolution.

reimplementation of mfDCA in python

Code used in the experiments of the paper COEGAN: Evaluating the Coevolution Effect in Generative Adversarial Networks http://gecco-2019.sigevo.org

Co-evolution of agents and environments in GVG-AI

A Julia package to analyze protein sequences, structures, and evolutionary information