protein-evolution

Here are 8 public repositories matching this topic...

diegozea / MIToS.jl

A Julia package to analyze protein sequences, structures, and evolutionary information

bioinformatics biology proteins pdb protein-structure julia-language conservation mutual-information structural-bioinformatics protein-evolution pfam sifts multiple-sequence-alignment coevolution protein-sequence-analysis

Updated Oct 23, 2024
Julia

jbloomlab / phydms

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phylogenetic analyses informed by deep mutational scanning data

phylogenetics molecular-evolution deep-mutational-scanning protein-evolution

Updated Jun 12, 2024
HTML

PhyloSofS-Team / thoraxe

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Use Thor's Axe to cut exons into their evolutionary building blocks ⚡

bioinformatics alternative-splicing orthology-inference exon protein-evolution homology

Updated Jun 14, 2024
Python

PhyloSofS-Team / PhyloSofS

Star

A tool to model the evolution and structural impact of alternative splicing

phylogenetic-trees alternative-splicing bionformatics protein-evolution homology-modeling

Updated Jun 21, 2022
Python

ayushkarnawat / profit

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Exploring evolutionary protein fitness landscapes

optimization protein-structure pytorch semi-supervised-learning protein-sequences bayesian-inference nlp-machine-learning active-learning fitness-landscape protein-evolution gradient-free-optimization

Updated Jul 17, 2020
Python

lauralwd / LAR_phylogeny_gungor-et-al-2020

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Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.

biology open-data open-science orthologues phylogeny science-research protein-evolution open-notebook plant-genetic-resources plant-genomics

Updated Oct 6, 2020
Jupyter Notebook

sriramsrikant / 2020-CB_ABC-selectivity

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Code-base for my ABC-selectivity paper in Current Biology

flow-cytometry yeast protein-evolution sequence-analysis homology-model

Updated Apr 4, 2020
Jupyter Notebook

lauralwd / azolla_MYBs

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Phylogeny and classification of Azolla filiculoides MYB genes

transcription-factors biology open-data open-science phylogeny science-research protein-evolution open-notebook plant-genetic-resources plant-genomics

Updated Feb 26, 2021
HTML

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protein-evolution

Here are 8 public repositories matching this topic...

diegozea / MIToS.jl

jbloomlab / phydms

PhyloSofS-Team / thoraxe

PhyloSofS-Team / PhyloSofS

ayushkarnawat / profit

lauralwd / LAR_phylogeny_gungor-et-al-2020

sriramsrikant / 2020-CB_ABC-selectivity

lauralwd / azolla_MYBs

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