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- research-articleJune 2024
Latent assimilation with implicit neural representations for unknown dynamics
Journal of Computational Physics (JOCP), Volume 506, Issue Chttps://doi.org/10.1016/j.jcp.2024.112953AbstractData assimilation is crucial in a wide range of applications, but it often faces challenges such as high computational costs due to data dimensionality and incomplete understanding of underlying mechanisms. To address these challenges, this study ...
Highlights- Implicit neural representations help establish a mesh-free assimilation framework.
- Spherical harmonics bring theoretical guarantee for the neural network.
- Uncertainty of trained model is evaluated; compatible with existing ...
- research-articleNovember 2022
Computing solution landscape of nonlinear space-fractional problems via fast approximation algorithm
Journal of Computational Physics (JOCP), Volume 468, Issue Chttps://doi.org/10.1016/j.jcp.2022.111513AbstractThe nonlinear space-fractional problems often allow multiple stationary solutions, which can be much more complicated than the corresponding integer-order problems. In this paper, we systematically compute the solution landscapes of ...
Highlights- A fast approximation algorithm for variable-order spectral fractional Laplacian.
- research-articleJanuary 2022
Error Estimates for Euler Discretization of High-Index Saddle Dynamics
SIAM Journal on Numerical Analysis (SINUM), Volume 60, Issue 5Pages 2925–2944https://doi.org/10.1137/21M1458314High-index saddle dynamics provide an effective means to compute the any-index saddle points and construct the solution landscape. In this paper, we prove error estimates for Euler discretization of high-index saddle dynamics with respect to the time step ...
- research-articleJanuary 2020
A Variable-Separation Method for Nonlinear Partial Differential Equations With Random Inputs
SIAM Journal on Scientific Computing (SISC), Volume 42, Issue 2Pages A723–A750https://doi.org/10.1137/19M1262486In this paper, we consider a variable-separation (VS) method to solve the nonlinear partial differential equations (PDEs) with random inputs. The aim of the VS method is to get a sep- arated representation of the Galerkin solution for nonlinear PDEs with ...
- research-articleJanuary 2020
Anisotropic Nonlocal Diffusion Operators for Normal and Anomalous Dynamics
Multiscale Modeling and Simulation (MMS), Volume 18, Issue 1Pages 415–443https://doi.org/10.1137/18M1184990The Laplacian $\Delta$ is the infinitesimal generator of isotropic Brownian motion, being the limit process of normal diffusion, while the fractional Laplacian $\Delta^{\beta/2}$ serves as the infinitesimal generator of the limit process of isotropic Lévy ...
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- research-articleNovember 2019
Transition pathways between defect patterns in confined nematic liquid crystals
Journal of Computational Physics (JOCP), Volume 396, Issue CPages 1–11https://doi.org/10.1016/j.jcp.2019.06.028AbstractConfined nematic liquid crystals can admit multiple stable equilibria. These equilibrium states usually exhibit peculiar defect patterns in order to satisfy the topological constraints imposed by the boundary conditions. In this work, ...
- research-articleJanuary 2019
High-Index Optimization-Based Shrinking Dimer Method for Finding High-Index Saddle Points
SIAM Journal on Scientific Computing (SISC), Volume 41, Issue 6Pages A3576–A3595https://doi.org/10.1137/19M1253356We present a high-index optimization-based shrinking dimer (HiOSD) method to compute index-$k$ saddle points as a generalization of the optimization-based shrinking dimer method for index-1 saddle points [L. Zhang, Q. Du, and Z. Zheng, SIAM J. Sci. ...
- articleJune 2018
A Fast Algorithm for the Moments of Bingham Distribution
Journal of Scientific Computing (JSCI), Volume 75, Issue 3Pages 1337–1350https://doi.org/10.1007/s10915-017-0589-2We propose a fast algorithm for evaluating the moments of Bingham distribution. The calculation is done by piecewise rational approximation, where interpolation and Gaussian integrals are utilized. Numerical tests show that the algorithm reaches the ...
- articleMarch 2018
Approximations on SO(3) by Wigner D-matrix and Applications
Journal of Scientific Computing (JSCI), Volume 74, Issue 3Pages 1706–1724https://doi.org/10.1007/s10915-017-0515-7We consider approximations on SO(3) by Wigner D-matrix. We establish basic approximation properties of Wigner D-matrix, develop efficient numerical schemes using Wigner D-matrix for elliptic and parabolic equations on SO(3), and establish corresponding ...
- research-articleJanuary 2018
Boundary Problems for the Fractional and Tempered Fractional Operators
Multiscale Modeling and Simulation (MMS), Volume 16, Issue 1Pages 125–149https://doi.org/10.1137/17M1116222To characterize the Brownian motion in a bounded domain $\Omega$, it is well known that the boundary conditions of the classical diffusion equation just rely on the given information of the solution along the boundary of a domain; in contrast, for the ...
- research-articleJanuary 2018
A Tensor Model for Nematic Phases of Bent-Core Molecules Based on Molecular Theory
Multiscale Modeling and Simulation (MMS), Volume 16, Issue 4Pages 1581–1602https://doi.org/10.1137/16M1099789We construct a tensor model for nematic phases of bent-core molecules from molecular theory. The form of free energy is determined by molecular symmetry, which includes the couplings and derivatives of a vector and two second-order tensors, with the ...
- articleJuly 2015
On a Molecular Based Q-Tensor Model for Liquid Crystals with Density Variations
Multiscale Modeling and Simulation (MMS), Volume 13, Issue 3Pages 977–1000https://doi.org/10.1137/140990474In this paper, we study the new Q-tensor model previously derived from Onsager's molecular theory by Han et al. [Arch. Rational Mech. Anal., 215 (2015), pp. 741--809] for static liquid crystal modeling. Taking density and Q-tensor as order parameters, the ...
- research-articleJanuary 2015
Dynamics of the Nematic-Isotropic Sharp Interface for the Liquid Crystal
SIAM Journal on Applied Mathematics (SJAM), Volume 75, Issue 4Pages 1700–1724https://doi.org/10.1137/140994113In this paper, we derive the sharp interface model of the nematic-isotropic phase transition from the Landau--de Gennes theory by using the matched asymptotic expansion method. The model includes the evolution equation of the velocity and director field of ...
- research-articleJanuary 2015
Rigorous Derivation from Landau--de Gennes Theory to Ericksen--Leslie Theory
SIAM Journal on Mathematical Analysis (SIMA), Volume 47, Issue 1Pages 127–158https://doi.org/10.1137/13093529XStarting from the Beris--Edwards system for the liquid crystal, we present a rigorous derivation of the Ericksen--Leslie system with general Ericksen stress and Leslie stress by using the Hilbert expansion method.
- articleAugust 2014
Boundary effects in confined copolymer system and compressible SCFT model
Journal of Computational and Applied Mathematics (JCAM), Volume 265Pages 290–300https://doi.org/10.1016/j.cam.2013.09.054The conventionally used Modified Self-consistent Field Theory (MSCFT) for confined system is known to have two major difficulties: numerical instability and dependence on artificial constraints. Here we use Compressible Model based Self-consistent Field ...
- research-articleJanuary 2014
Numerical methods for quasicrystals
Quasicrystals are one kind of space-filling structures. The traditional crystalline approximant method utilizes periodic structures to approximate quasicrystals. The errors of this approach come from two parts: the numerical discretization, and the ...
- research-articleMarch 2013
Simulation Study of Quasi-Ballistic Transport in Asymmetric DG-MOSFET by Directly Solving Boltzmann Transport Equation
IEEE Transactions on Nanotechnology (ITN), Volume 12, Issue 2Pages 168–173https://doi.org/10.1109/TNANO.2013.2237924In this study, we simulate double-gate MOSFET using a 2-D direct Boltzmann transport equation solver. Simulation results are interpreted by quasi-ballistic theory. It is found that the relation between average carrier velocity at virtual source and back-...
- articleOctober 2010
Spectral method for exploring patterns of diblock copolymers
Journal of Computational Physics (JOCP), Volume 229, Issue 20Pages 7796–7805https://doi.org/10.1016/j.jcp.2010.06.038A numerical method in Fourier-space is developed to solve the polymeric self-consistent field equations. The method does not require a priori symmetric information. More significantly, periodic structure can be adjusted automatically during the ...
- articleMarch 2010
A numerical method for the study of nucleation of ordered phases
Journal of Computational Physics (JOCP), Volume 229, Issue 5Pages 1797–1809https://doi.org/10.1016/j.jcp.2009.11.009A numerical approach based on the string method is developed to study nucleation of ordered phases in first-order phase transitions. Among other things, this method allows an efficient computation of the minimum energy path (MEP) during the nucleation ...
- articleJune 2008
Boundary treatments in non-equilibrium Green's function (NEGF) methods for quantum transport in nano-MOSFETs
Journal of Computational Physics (JOCP), Volume 227, Issue 13Pages 6553–6573https://doi.org/10.1016/j.jcp.2008.03.018Non-equilibrium Green's function (NEGF) is a general method for modeling non-equilibrium quantum transport in open mesoscopic systems with many body scattering effects. In this paper, we present a unified treatment of quantum device boundaries in the ...