JP2019534856A - 二重保護されたプロセレンテラジン基質 - Google Patents
二重保護されたプロセレンテラジン基質 Download PDFInfo
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- JP2019534856A JP2019534856A JP2019513387A JP2019513387A JP2019534856A JP 2019534856 A JP2019534856 A JP 2019534856A JP 2019513387 A JP2019513387 A JP 2019513387A JP 2019513387 A JP2019513387 A JP 2019513387A JP 2019534856 A JP2019534856 A JP 2019534856A
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- 239000000758 substrate Substances 0.000 title claims description 34
- 150000001875 compounds Chemical class 0.000 claims abstract description 130
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- JYPCXBJRLBHWME-UHFFFAOYSA-N glycyl-L-prolyl-L-arginine Natural products NCC(=O)N1CCCC1C(=O)NC(CCCN=C(N)N)C(O)=O JYPCXBJRLBHWME-UHFFFAOYSA-N 0.000 description 1
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- 125000001475 halogen functional group Chemical group 0.000 description 1
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- 125000004051 hexyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
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- OSHXXOCGXCIKKN-UHFFFAOYSA-N phenylmethoxycarbamic acid Chemical group OC(=O)NOCC1=CC=CC=C1 OSHXXOCGXCIKKN-UHFFFAOYSA-N 0.000 description 1
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- 238000002360 preparation method Methods 0.000 description 1
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- 229960004919 procaine Drugs 0.000 description 1
- 230000004850 protein–protein interaction Effects 0.000 description 1
- 125000004309 pyranyl group Chemical group O1C(C=CC=C1)* 0.000 description 1
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- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 125000000719 pyrrolidinyl group Chemical group 0.000 description 1
- 125000001422 pyrrolinyl group Chemical group 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
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- 229910052708 sodium Inorganic materials 0.000 description 1
- 239000012279 sodium borohydride Substances 0.000 description 1
- 229910000033 sodium borohydride Inorganic materials 0.000 description 1
- 241000894007 species Species 0.000 description 1
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- 125000004213 tert-butoxy group Chemical group [H]C([H])([H])C(O*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
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- 238000012360 testing method Methods 0.000 description 1
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- 125000005304 thiadiazolidinyl group Chemical group 0.000 description 1
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- IMFACGCPASFAPR-UHFFFAOYSA-N tributylamine Chemical compound CCCCN(CCCC)CCCC IMFACGCPASFAPR-UHFFFAOYSA-N 0.000 description 1
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- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 1
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- XHGIFBQQEGRTPB-UHFFFAOYSA-N tris(prop-2-enyl) phosphate Chemical compound C=CCOP(=O)(OCC=C)OCC=C XHGIFBQQEGRTPB-UHFFFAOYSA-N 0.000 description 1
- 125000005455 trithianyl group Chemical group 0.000 description 1
- 238000001665 trituration Methods 0.000 description 1
- JABYJIQOLGWMQW-UHFFFAOYSA-N undec-4-ene Chemical compound CCCCCCC=CCCC JABYJIQOLGWMQW-UHFFFAOYSA-N 0.000 description 1
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- 238000010626 work up procedure Methods 0.000 description 1
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Abstract
Description
本出願は、参照により全体が本明細書に組み込まれている、2016年9月9日に出願された米国仮特許出願第62/385,701号に基づく利益を主張する。
本出願は、EFS−Webを介してASCII形式で提出され、参照によりその全体が本明細書に組み込まれている、配列表を含む。2017年9月8日に作成された該ASCIIコピーは、ASFILED_SequenceListing.txtという名称であり、2,071バイトのサイズである。
(I)、
またはその互変異性体もしくは塩[式中、Ar1、Ar2、及びAr3は、それぞれ独立して、アリール及びヘテロアリールからなる群から選択され、ここでAr1、Ar2、及びAr3はそれぞれ、Ar1、Ar2、またはAr3のうちの1つが−X−L2−R6で置換されることを条件として、場合により置換されており、Xは、O、S、またはNRx(ここでRxは、水素またはC1〜C6アルキルである)であり、L1及びL2は、それぞれ独立して、結合及び1〜50原子のリンカーからなる群から選択され、ここでL1及びL2はそれぞれ、場合により置換されており、R3及びR6は、それぞれ独立して、酵素基質基から選択される]
が開示される。
別途定義しない限り、本明細書で使用される全ての技術用語及び科学用語は、当業者によって一般的に理解されているものと同じ意味を有する。矛盾がある場合、本文書が定義を含めて優先する。好ましい方法及び材料を以下に記載するが、本明細書に記載されるものと同様または均等な方法及び材料を本発明の実践または試験において使用してもよい。本明細書において言及される公開文献、特許出願、特許、及び他の参考文献は全て、参照によりその全体が本明細書に組み込まれている。本明細書において開示される材料、方法、及び例は例示に過ぎず、限定を意図するものではない。
式(I)の化合物
(I)、
またはその互変異性体もしくは塩
[式中、Ar1、Ar2、及びAr3は、それぞれ独立して、アリール及びヘテロアリールからなる群から選択され、ここでAr1、Ar2、及びAr3はそれぞれ、Ar1、Ar2、またはAr3のうちの1つが−X−L2−R6で置換されることを条件として、場合により置換されており、
Xは、O、S、またはNRx(ここでRxは、水素またはC1〜C6アルキルである)であり、
L1及びL2は、それぞれ独立して、結合及び1〜50原子のリンカーからなる群から選択され、ここでL1及びL2はそれぞれ、場合により置換されており、
R3及びR6は、それぞれ独立して、酵素基質基から選択される]
が開示される。
からなる群から選択される。
からなる群から選択される。
式中、Ar1、Ar2、Ar3、X、L1、L2、R3、及びR6は、上記に定義した通りである。
式中、Ar1、Ar2、Ar3、X、L1、L2、R3、及びR6は、上記に定義した通りである。
式中、Ar1、Ar2、Ar3、X、L1、L2、R3、及びR6は、上記に定義した通りである。
(2S,3R,4S,5S,6R)−2−(4−(8−ベンジル−2−(フラン−2−イルメチル)−3−((4−(((2S,3R,4S,5S,6R)−3,4,5−トリヒドロキシ−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−2−イル)オキシ)ベンジル)オキシ)イミダゾ[1,2−a]ピラジン−6−イル)フェノキシ)−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−3,4,5−トリオール、
4−(((8−ベンジル−2−(フラン−2−イルメチル)−6−(3−(ホスホノオキシ)フェニル)イミダゾ[1,2−a]ピラジン−3−イル)オキシ)メチル)フェニルリン酸二水素塩(dihydrogen phosphate)、
2−(2−アミノアセトアミド)−N−(3−(3−((4−(2−(2−アミノアセトアミド)−3−フェニルプロパンアミド)ベンジル)オキシ)−8−ベンジル−2−(フラン−2−イルメチル)イミダゾ[1,2−a]ピラジン−6−イル)フェニル)−3−フェニルプロパンアミド、
(2S,3R,4S,5S,6R)−2−(4−(8−ベンジル−2−(フラン−2−イルメチル)−3−(((2S,3R,4S,5S,6R)−3,4,5−トリヒドロキシ−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−2−イル)オキシ)イミダゾ[1,2−a]ピラジン−6−イル)フェノキシ)−6−(ヒドロキシメチル)、
((8−ベンジル−2−(フラン−2−イルメチル)−6−(3−(ホスホノオキシ)フェニル)イミダゾ[1,2−a]ピラジン−3−イル)オキシ)メチルホスフェート、ならびに
それらの塩、及びそれらの互変異性体が挙げられるが、これらに限定されない。
式(I)の化合物は、発光をもたらすルシフェラーゼの基質であり得る。本化合物は、改善された水溶解度、改善された安定性、改善された細胞透過性、増加した細胞との生体適合性、低減した自己発光、及び/または低減した毒性を有し得る。本開示の化合物は、他のセレンテラジン及びフリマジン類似体(例えば、モノ保護された化合物であるセレンテラジン及びフリマジン類似体)と比較して、予想外に優れたバックグラウンド性能(シグナル/バックグラウンド)を呈し得る。概して、二重保護されたプロ基質のバックグラウンドは、モノ保護された基質よりも2〜3桁低く、バックグラウンドシグナルは長期間(例えば24時間)にわたって非常に安定である。本開示の二重保護されたセレンテラジン類似体により、感受性の著しい改善に起因する新たなアッセイが可能になり、多くの用途で大きな可能性がもたらされる。
式(I)の化合物は、スキーム1〜6に示すように合成することができる。続くスキームの説明で使用されている略語は、Ag2Oは酸化銀、ACNはアセトニトリル、NaBH4は水素化ホウ素ナトリウム、MeOHはメタノール、CBr4は四臭化炭素、Ph3Pはトリフェニルホスフィン、NaOMeはナトリウムメトキシド、DCMはジクロロメタン、K2CO3は炭酸カリウム、Pd(Ph3)4はテトラキス(トリフェニルホスフィン)パラジウム(0)、DMFはジメチルホルムアミド、そしてDBUは1,8−ジアザビシクロ[5.4.0]ウンデカ−7−エンである。
本開示の化合物は、ルシフェラーゼ基質、例えば、セレンテラジン類似体が使用されてきた方法であればいかなる方法で使用されてもよい。これらは例えば、試料中の1つ以上の分子、例えば酵素、酵素反応の補助因子、酵素基質、酵素阻害剤、酵素活性化剤、もしくはOHラジカル、または1つ以上の条件、例えば酸化還元条件を検出するためにセレンテラジンの類似体を用いる、生物発光方法において使用され得る。試料は、動物(例えば、脊椎動物)、植物、真菌、生理液(例えば、血液、血漿、尿、粘膜分泌物)、細胞、細胞ライセート、細胞上清、または細胞の精製画分(例えば、細胞内画分)を含み得る。そのような分子の存在、量、スペクトル分布、放出動態、または比活性が検出または数量化され得る。この分子は、多相溶液(例えば、エマルジョンまたは懸濁液)を含む溶液中、または固体支持体(例えば、粒子、毛細管、またはアッセイ容器)において検出または数量化され得る。
Claims (21)
- 式(I)の化合物
(I)、
またはその互変異性体もしくは塩
[式中、Ar1、Ar2、及びAr3は、それぞれ独立して、アリール及びヘテロアリールからなる群から選択され、ここでAr1、Ar2、及びAr3はそれぞれ、Ar1、Ar2、またはAr3のうちの1つが−X−L2−R6で置換されることを条件として、場合により置換されており、
Xは、O、S、またはNRx(ここでRxは、水素またはC1〜C6アルキルである)であり、
L1及びL2は、それぞれ独立して、結合及び1〜50原子のリンカーからなる群から選択され、ここでL1及びL2はそれぞれ、場合により置換されており、
R3及びR6は、それぞれ独立して、酵素基質基から選択される]。 -
- Ar2はフリルまたはフェニルである、請求項1または請求項2に記載の化合物。
- XはOである、請求項1〜3のいずれか1項に記載の化合物。
- L1及びL2は、それぞれ独立して、結合、アルキレン、またはアリーレンアルキレンであり、
ここで、アルキレンまたはアリーレンアルキレンのアルキレン鎖部分における−CH2−部分のうちの1つ以上は、場合により、C=O、C=S、NRx1、O、S、NO、SO、及びSO2に置き換えられており、各事例におけるRx1は、独立して、水素及びC1〜C6アルキルからなる群から選択され、
アルキレン及びアリーレンアルキレンは、それぞれ独立して、ハロゲン、シアノ、ニトロ、フルオロアルキル、アルコキシフルオロアルキル、フルオロアルコキシ、アルキル、アルケニル、アルキニル、ハロアルキル、ハロアルコキシ、ヘテロアルキル、シクロアルキル、シクロアルケニル、アリール、ヘテロアリール、複素環、シクロアルキルアルキル、ヘテロアリールアルキル、アリールアルキル、ヒドロキシ、ヒドロキシアルキル、アルコキシ、アルコキシアルキル、アルキレン、アリールオキシ、フェノキシ、ベンジルオキシ、アミノ、アルキルアミノ、ジアルキルアミノ、アシルアミノ、アミノアルキル、アリールアミノ、スルホニルアミノ、スルフィニルアミノ、スルホニル、アルキルスルホニル、アリールスルホニル、アミノスルホニル、スルフィニル、−COOH、ケトン、アミド、カルバメート、シリル、置換シリル、t−ブチルジメチルシリル、アルキルスルファニル、スルファニル、及びアシルからなる群から独立して選択される、0、1、2、3、4、5、6、7、8、9、または10個の置換基で置換されている、
請求項1〜4のいずれか1項に記載の化合物。 - L1及びL2は、それぞれ独立して、
からなる群から選択される、請求項1〜5のいずれか1項に記載の化合物。 - L1及びL2は、それぞれ独立して、
- L1及びL2はそれぞれ結合である、請求項1〜7のいずれか1項に記載の化合物。
- R3及びR6は、それぞれ独立して、ペプチド、アミノ酸、サッカライド、及びホスフェートからなる群から選択される基に由来する部分である、請求項1〜8のいずれか1項に記載の化合物。
- R3及びR6は、それぞれ独立して、
R20a及びR20bは、それぞれ独立して、1、2、3、または4つの−OR30基及び場合により1つのオキソ基で場合により置換されている、水素、ハロゲン、及びC1〜C6アルキルからなる群から選択され、ここで各事例におけるR30は、独立して、水素、C1〜C6アルキル、及びC(=O)R31(ここでR31は、C1〜C6アルキルである)からなる群から選択され、
各事例におけるR21a、R21b、R22a、R22b、R23a、及びR23bは、それぞれ独立して、水素、ハロゲン、OR32、及びNR33R34からなる群から選択され、ここで各事例におけるR32〜R34は、それぞれ独立して、水素、C1〜C6アルキル、及びC(=O)R35(ここでR35は、水素またはC1〜C6アルキルである)からなる群から選択され、
各事例におけるR24は、独立して、水素及びC(=O)R36(ここでR36は、水素、C1〜C6アルキル、−OH、及び−O−C1〜C6アルキルからなる群から選択される)からなる群から選択され、
R25及びR26は、それぞれ独立して、水素及びC1〜C6アルキルからなる群から選択され、
R27及びR28は、それぞれ独立して、
R29a及びR29bは、それぞれ独立して、水素であるか、またはR29a及びR27は、それらが結合している原子と一緒に5員環を形成することができる]
からなる群から選択される、請求項1〜9のいずれか1項に記載の化合物。 - R3及びR6は、それぞれ独立して、
- (2S,3R,4S,5S,6R)−2−(4−(8−ベンジル−2−(フラン−2−イルメチル)−3−((4−(((2S,3R,4S,5S,6R)−3,4,5−トリヒドロキシ−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−2−イル)オキシ)ベンジル)オキシ)イミダゾ[1,2−a]ピラジン−6−イル)フェノキシ)−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−3,4,5−トリオール、
4−(((8−ベンジル−2−(フラン−2−イルメチル)−6−(3−(ホスホノオキシ)フェニル)イミダゾ[1,2−a]ピラジン−3−イル)オキシ)メチル)フェニルリン酸二水素塩、
2−(2−アミノアセトアミド)−N−(3−(3−((4−(2−(2−アミノアセトアミド)−3−フェニルプロパンアミド)ベンジル)オキシ)−8−ベンジル−2−(フラン−2−イルメチル)イミダゾ[1,2−a]ピラジン−6−イル)フェニル)−3−フェニルプロパンアミド、
(2S,3R,4S,5S,6R)−2−(4−(8−ベンジル−2−(フラン−2−イルメチル)−3−(((2S,3R,4S,5S,6R)−3,4,5−トリヒドロキシ−6−(ヒドロキシメチル)テトラヒドロ−2H−ピラン−2−イル)オキシ)イミダゾ[1,2−a]ピラジン−6−イル)フェノキシ)−6−(ヒドロキシメチル、及び
((8−ベンジル−2−(フラン−2−イルメチル)−6−(3−(ホスホノオキシ)フェニル)イミダゾ[1,2−a]ピラジン−3−イル)オキシ)メチルホスフェート
からなる群から選択される、請求項1に記載の化合物、またはそれらの互変異性体もしくは塩。 - 発光アッセイにおいて30分間〜24時間にわたって測定した場合に少なくとも500相対発光量(RLU)のシグナル対バックグラウンド比を呈する、請求項1〜12のいずれか1項に記載の化合物であって、前記シグナル対バックグラウンド比は、前記化合物、セレンテラジン利用酵素、及び標的酵素を含有する試料から発生したRLUの、前記化合物及び前記セレンテラジン利用酵素を含有する試料から発生したRLUに対する比を求めることによって判定される、前記化合物。
- R3及びR6はそれぞれ、グルコシダーゼ、ガラクトシダーゼ、グルクロニダーゼ、ノイラミニダーゼ、ホスファターゼ、グルタチオンS−トランスフェラーゼ、レダクターゼ、デヒドロゲナーゼ、CYP P450、カスパーゼ3/7、カスパーゼ6、カスパーゼ8、カスパーゼ9、カスパーゼ2、ジペプチジルペプチダーゼ4(DPPIV)、カルパイン及びキモトリプシン様プロテアソーム、トリプシン様プロテアソーム、カスパーゼ様プロテアソーム、グランザイムB、カテプシンB/L、カテプシンK、トロンビン、トリプシン、アミノペプチダーゼ、ならびにSARSプロテアーゼからなる群から独立して選択される酵素の酵素基質基である、請求項1〜13のいずれか1項に記載の化合物。
- 請求項1〜14のいずれか1項に記載の化合物を含むキット。
- ルシフェラーゼを更に含む、請求項15に記載のキット。
- バッファー試薬を更に含む、請求項15に記載のキット。
- 試料中の発光を検出するための方法であって、
請求項1〜14のいずれか1項に記載の化合物に試料を接触させることと、
セレンテラジンを利用するルシフェラーゼが前記試料中に存在しない場合は、これに前記試料を接触させることと、
発光を検出することと
を含む、前記方法。 - 前記試料が、生細胞を含有する、請求項18に記載の方法。
- 前記試料が、セレンテラジンを利用するルシフェラーゼを含有する、請求項18に記載の方法。
- トランスジェニック動物における発光を検出するための方法であって、
請求項1〜14のいずれか1項に記載の化合物をトランスジェニック動物に投与することと、
発光を検出することと
を含み、
前記トランスジェニック動物が、セレンテラジンを利用するルシフェラーゼを発現する、前記方法。
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