JP2011501276A - 健康関連の転帰を予測するためのオンラインコミュニティを使用した自己改善方法 - Google Patents
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Abstract
Description
本出願は、2007年10月12日に出願された米国仮特許出願第60/998,669号、2007年10月12日に出願された米国仮特許出願第60/998,768号、2008年3月20日に出願された米国仮特許出願第61/070,067号の優先権を主張する。これら出願の各々の全体内容が本明細書に参考として援用される。
本発明は、オンラインコミュニティ内の自己申告健康データを使用して、人生を左右する病気における有意な健康事象を予測し、個人の生活を向上させ、患者自己管理を改善する方法を対象とする。
世界保健機関(World Health Organization)によると、慢性疾患は、現在、世界における身体障害および死亡の主要原因であって、年間5,700万の死亡例の59%および世界疾病負担の46%を占めている。米国疾病対策予防センター(U.S. Centers for Disease Control and Prevention)によると、9,000万人超のアメリカ人が、慢性疾患と共存しており、国内$1.4兆の医療費の75%を上回る額を占めている。また、慢性疾患は、65歳未満の潜在的死亡年齢の3分の1を占める。循環器疾患または糖尿病等の一般的な病気は、危険因子、予防、および治療の観点から、特徴が明確であるが、多数の研究中および治療不可能な病態が存在する。全米希少疾病患者団体(National Organization for Rare Disorders:NORD)は、約6,000例の希少疾患を突き止めており、総計2,300万人のアメリカ人に影響を及ぼしている。
本発明は、上述の必要性に合致し、人生を左右する健康状態を伴う個人のための健康転帰を予測する効果的方法を提供し、本明細書の議論から明白なように、その健康管理をさらに促進し、より優れた転帰をもたらすであろう。
本発明は、以下の定義を参照することによって、最も明確に理解される。
本発明は、一部として、オンラインコミュニティ内の自己申告健康データを使用して、人生を左右する病気における有意な健康事象を予測し、個人の生活を向上させ、患者自己管理を改善する方法を対象とする。
自己申告健康データは、www.patientslikeme.comから利用可能なPatientsLikeMe(登録商標)サービス等のいくつかのソースから収集可能である。
また、本発明は、疾患をモデル化するための先験的方法を提供。本方法は、進行性疾患の先験的モデルを含むことが可能である。本方法は、病理の基礎記述に依存せず、したがって、病理が未知の疾患にさえ使用されてもよい。
また、本発明は、疾患の基礎病理の理解に依存する、疾患のための病理学的モデル化アルゴリズムを提供し、母集団の部分集合または個人に関する予測を行なうために使用可能である。
モデルに対する本反復改良の別の実施例は、各患者の時間オフセットを補正することである。モデルの疾患および仕様に応じて、患者は、不適切な記憶、「最初の症状」の曖昧な定義、またはいくつかの疾患変異形が他よりも明白な最初の症状を有し得るという事実のため、不正確にその発病日を報告している場合がある。各患者の発病日に対する補正オフセット(Qを各データ点の時間値に効果的に追加する(Qは、ある実数値))は、モデルの最小二乗平均を低減してもよい。患者の補正された発病日が、診断日前でなければならいことを考慮して、Qの最適化は、ある有界間隔に基づいて行なわれてもよく、例えば、Q={q ∈ R:q≧−d,q≦d}(dは、提示された発病と診断との間の時間間隔)。本最適化は、Brentの方法等の数値法を使用して行なわれてもよい。Brentの方法は、R.P.Brent,Algorithms for Minimization without Derivatives(1973)等の刊行物に論じられている。モデル関数は、本事例では、同様に、新しいパラメータ集合に再適合可能であって、ある停止条件(例えば、収束またはQ値のさらなる変化の欠如)に合致するまで、1回以上繰り返され得る。
探索的データ分析技術を利用して、どの変数および変数の組み合わせが、着目応答(転帰、事象、疾患状態)と関連付けられるかを探索可能である。試料、すなわち、訓練データ集合は、単純重回帰法(小規模模範的試料において)、あるいは欠測値を伴うまたは伴わない、超大規模データ集合のための探索法を使用して、分析される。一実施例では、CHAID(CHi−squared Automatic Interaction Detector)法は、属性のあらゆる可能性のある組み合わせの分析および順序付けを伴う。分析専門家は、CHAIDアルゴリズム内のパラメータ設定を介して、分析を誘導し、どの属性が最も重要な予測子であるか、どの属性が予測値を有していないか、およびどのように属性が組み合わされ、または相互作用し、応答の予測を支援するか、識別する。
本明細書の疾患モデル化アルゴリズムを使用して、特定の患者の経験の個人予測を提供可能である。例えば、疾患の診断に応じて、患者は、自身、疾患、1つ以上の病態に関する情報を入力可能である。次いで、本情報は、アルゴリズムに入れられ、患者が疾患の進行のどの段階にあるかを決定する。例えば、図6に示されるように、アルゴリズムは、ALS患者のALSFRS−R値が将来の所与の時点においてどうなるかを予測可能である。同様に、アルゴリズムは、車椅子への拘束または人工呼吸器の使用等、ある事象が発生する時を予測可能である。そのような予測は、予測における信頼性の推定とともに、患者に提示可能である。
予測をさらに精緻化するために、本明細書に記載される方法は、事前予測の精度を検証する方法を含むことが可能である。例えば、アルゴリズムが、2009年2月1日までに、患者が車椅子に拘束されると予測する場合、アルゴリズムは、その日または近日に患者に電子メールを送信し、本予測が正確であるかどうか決定可能である。加えて、またはあるいは、患者は、追跡電子メールの必要性を最小限にする更新データをアルゴリズムに継続して提供可能である。
また、本発明は、希少疾患下位群の検出を可能とする。例えば、ある遺伝子型は種々の疾患に対して、増大または減少した耐性を呈する。追加遺伝子型は、予測された疾患進行から実質的に逸脱する患者群を検出し、患者に関連する遺伝子型および他のデータを分析することによって、識別可能である。
また、本発明は、新しい介入および薬剤の承認適応症外使用の識別が可能である。そのような介入および承認適応症外使用は、疾患を有する母集団のデータを分析し、介入の結果として、疾患進行または症状重症度の改善を経験する患者を識別し、介入を識別することによって、達成可能である。潜在的に大規模な患者コミュニティを考慮すると、本発明は、既存の薬剤の承認適応症外使用の識別を目指す製薬研究者にとって、特に価値がある。
ウェブ対応データ処理システムを使用して、本明細書に記載される発明を実装可能である。ウェブ対応データ処理システムは、当該分野において周知であって、クライアントコンピュータと、サーバコンピュータとを含むことが可能である。クライアントおよびサーバコンピュータは、インターネットを介して、互いに連結可能である。あるいは、クライアントおよびサーバコンピュータは、イントラネットを介して、例えば、民間企業ネットワークのファイアウォール背後で、互いに連結可能である。民間企業ネットワークは、民間病院用のネットワークであり得る。
本発明は、科学および医療要員によって使用され、疾患の進行および/または重症度を査定するために使用されるモデルを評価するための管理ツールを含む。統計技術を使用して、データベース内のあらゆる予測変数の有用性が、そのR2値別に予測値を順位付けることによって、査定可能である。
(実施例1:ALSにおける車椅子例)
遺伝性の筋萎縮性側索硬化症であると診断された55歳男性は、A4V(4番目において、アラニンがバリンで置換されている)として知られるスーパーオキシドジスムターゼ1遺伝子(SODl)の変異体に対して試験されたことを示すデータを入力する。患者は、オンラインコミュニティ内のプロファイル上に、自己申告機能的転帰尺度を使用して、現在までのその疾患進行に関するデータを入力する。
パーキンソン病と診断された75歳男性は、2mg/日の割合で、MIRAPEX(登録商標)(プラミペキソール)を最近薬物処方されたことを示すデータを入力する。患者は、オンラインコミュニティ内のプロファイル上に、その薬物計画を記録するデータ入力モジュールを使用して、その治療計画に関するデータを入力する。患者は、アルコール依存症、うつ病、およびギャンブル依存症の既往歴を有していたデータを入力する。
ハンチントン病の臨床診断を伴う38歳男性は、臨床医による遺伝子検査によって、ハンチントン遺伝子上の病的CAG反復が比較的少なく、40個の三重反復のみ有することが明らかになったことを示すデータを入力する。患者は、高学歴、高社会経済的地位、および患者を支援可能な大家族を有するデータを入力する。
うつ病についてのいくつかの現代的理論は、うつ病が認知のひずみから生じると仮定する。あるゆる個人が、ある時点において、悲しんだり、憤慨したりするが、大部分の人は、そのような感情が束の間であることを認識するような考え方を有する。しかしながら、大うつ病性障害を有する人は、うつ病エピソードに入る前の時間を認識および想起する能力が欠如していると考えられ、したがって、将来の楽しい時間を想像できない。
本明細書に開示されるあらゆる特許、公開特許出願、および他の参考文献は、その全体が本明細書に参考として援用される。
当業者は、本明細書に記載される本発明の特定の実施形態の多くの対応物を認識、または日常の実験のみを使用して究明可能であるだろう。具体的には、本願は、本発明の「疾患」への適用について、間をおいて論じているが、本発明は、老化、排卵等の他の医療事象に等しく適用可能である。そのような対応物は、以下の請求項によって包含されることが意図される。
Claims (34)
- 個々の患者に対するリアルタイム個人用医学予測を提供するための方法であって、該方法は、
データベースを提供することであって、該データベースは該データベース内の各患者の1つ以上の属性を含む、複数の他の患者のための患者情報を含有する、ことと、
該複数の患者の疾患進行に基づいて、疾患のモデルを構築することと、
該個々の患者から要求を受信することであって、該患者は、1つ以上の属性と関連付けられている、ことと、
該モデルおよび該個々の患者の属性に基づいて、該個々の患者に対するリアルタイム予測を行なうことと
を含む、方法。 - 前記1つ以上の属性は、年齢、人種、民族性、性別、身長、体重、肥満度指数(BMI)、体容積指数(BVI)、遺伝子型、表現型、疾患重症度、疾患進行速度、機能的能力の測定値、生活の質、介入、および治療薬から成る群から選択される少なくとも1つを含む、請求項1に記載の方法。
- 前記疾患は、神経疾患、筋萎縮性側索硬化症(ALS)、多発性硬化症(MS)、パーキンソン病、ヒト免疫不全ウイルス(HIV)、後天性免疫不全症候群(AIDS)、うつ病、気分障害、血液癌、線維筋痛、てんかん、心的外傷後ストレス障害、外傷性脳損傷、循環器疾患、骨粗しょう症、慢性閉塞性肺疾患、関節炎、アレルギー、自己免疫疾患、および狼瘡から成る群から選択される少なくとも1つを含む、請求項1に記載の方法。
- 前記返されるデータは、前記他の患者集合の1人以上のメンバーのための個別データを含む、請求項1に記載の方法。
- 前記返されるデータは、前記他の患者集合の1人以上のメンバーのための集約データを含む、請求項1に記載の方法。
- 前記患者からの、個別データを閲覧するための要求を処理することをさらに備える、請求項5に記載の方法。
- 前記モデルは、前記複数の患者の部分集合のためのデータに基づき、前記方法は、
前記患者からの、該複数の患者の部分集合の構成を修正するための要求を処理することをさらに含む、請求項1に記載の方法。 - 前記他の患者の部分集合の構成は、ファジー論理によって定義される、請求項7に記載の方法。
- 前記複数の患者の部分集合の構成を修正することは、該部分集合内の患者の属性の範囲を修正することを含む、請求項7に記載の方法。
- 前記複数の患者の部分集合の構成を修正することは、該部分集合を構成する患者の属性の重要性を修正することを含む、請求項7に記載の方法。
- 前記複数の患者に関連するデータの多変量パターン合致検索を行なうことをさらに含む、請求項1に記載の方法。
- 前記予測のための信頼区間を計算することをさらに備える、請求項1に記載の方法。
- 前記予測のための信頼区間を計算することは、
前記複数の他の患者から報告されるデータ点の集合を選択することと、
該集合内の報告されるデータ点の各々に対して、
該報告されるデータ点に対応する他の患者のデータ集合を取得することと、
該データ集合および前記モデルによって、予測値を計算することと、
該予測値と該報告されるデータ点との間の誤差を計算することと、
該誤差の分布を生成することと、
該分布から信頼区間を計算することと
から構成される、請求項12に記載の方法。 - 前記報告されるデータ点の集合は、前記予測に対してn個の最近似報告データ点を含む、請求項13に記載の方法。
- 前記報告されるデータ点の集合は、距離メトリックによって定義される楕円体内の報告されるデータ点を含む、請求項13に記載の方法。
- 前記対応する他の患者の前記データ集合の規模は、前記個々の患者と関連付けられた属性の量に匹敵する、請求項13に記載の方法。
- 介入の影響を、該介入を伴わない予測と、該介入を伴う報告される転帰との間の差異を測定することによって分析することをさらに備える、請求項1に記載の方法。
- 前記差異は、複数の個々の患者に対して測定される、請求項17に記載の方法。
- 前記差異は、前記誤差の分布と比較される、請求項17に記載の方法。
- 前記差異は、前記モデルの前記信頼区間と比較される、請求項17に記載の方法。
- 前記モデルの前記信頼区間を超える、前記差異のうちの1つ以上を識別することをさらに含む、請求項20に記載の方法。
- 前記複数の個々の患者の前記差異の分布を整理することと、
該分布の標準誤差を算出することと
をさらに備える、請求項18に記載の方法。 - 前記信頼区間は、カイ二乗検定によって計算される、請求項12に記載の方法。
- 前記信頼区間は、前記個々の患者の属性の分散の測定値から計算される、請求項12に記載の方法。
- 前記信頼区間は、前記モデルを使用して、前記個々の患者の属性を該個々の患者に適合するモデルと比較することによって、計算される、請求項12に記載の方法。
- コンピュータ可読媒体であって、そのコンテンツが、コンピュータに個々の患者のリアルタイム個人用医学予測を提供するための方法を行なわせ、該方法は、
データベースを提供することであって、該データベースは該データベース内の各患者の1つ以上の属性を含む、複数の他の患者のための患者情報を含有する、ことと、
該複数の患者の疾患進行に基づいて、疾患のモデルを構築することと、
該個々の患者から要求を受信することであって、該患者は、1つ以上の属性と関連付けられる、ことと、
該モデルおよび該個々の患者の属性に基づいて、該個々の患者に対するリアルタイム予測を行なうことと
を含む、コンピュータ可読媒体。 - リアルタイム個人用医学予測を提供するための方法であって、該方法は、
疾患を有する患者のコミュニティから患者提出情報を収集することであって、該情報は、病態評価指標および介入データを含む、ことと、
該疾患のモデルを形成するために、該患者提出情報を利用することと、
個々の患者によって提出される情報を該モデルに適用することによって、特定の患者における該疾患の進行を予測することと
を含む、方法。 - 前記個々の患者によって提出される前記情報は、前記疾患の発病のデータを含む、請求項27に記載の方法。
- 前記疾患の前記進行を予測するステップは、リアルタイムで行なわれる、請求項27に記載の方法。
- 前記疾患の前記進行を予測するステップは、信頼区間を提供することを含む、請求項27に記載の方法。
- 前記疾患の前記進行を予測するステップは、グラフィカル予測を提供することを含む、請求項27に記載の方法。
- 前記グラフィカル予測は、評価尺度に関する前記疾患の進展を示す折れ線グラフである、請求項27に記載の方法。
- 前記疾患は、神経疾患、筋萎縮性側索硬化症(ALS)、多発性硬化症(MS)、パーキンソン病、ヒト免疫不全ウイルス(HIV)、後天性免疫不全症候群(AIDS)、うつ病、気分障害、血液癌、線維筋痛、てんかん、心的外傷後ストレス障害、外傷性脳損傷、循環器疾患、骨粗しょう症、慢性閉塞性肺疾患、関節炎、アレルギー、自己免疫疾患、および狼瘡から成る群から選択される少なくとも1つを含む、請求項27に記載の方法。
- 前記モデルは、前記疾患の病理モデルである、請求項27に記載の方法。
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