Imaging experiments in Biology often involve the acquisition of confocal z-stack images to quantify fluorescent signal in a biological sample. These z-stacks are usually analyzed using open-source programs such as FIJI, which are notoriously frustrating to work with, and do not facility intuitive high-throughput analysis of many images at once. …
image-processing scikit-image scalebar confocal-microscopy despeckle confocal-images confocal-zstack-images maximum-projection
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Updated
May 13, 2022 - Jupyter Notebook