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edlib Public
Forked from Martinsos/edlibLightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
C++ MIT License UpdatedApr 1, 2025 -
solo Public
Modern web interface for controlling Sonos devices on your local network.
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htslib Public
Forked from samtools/htslibC library for high-throughput sequencing data formats
C Other UpdatedJan 30, 2025 -
nvidia_gpu_prometheus_exporter Public
Forked from mindprince/nvidia_gpu_prometheus_exporterNVIDIA GPU Prometheus Exporter
Go Apache License 2.0 UpdatedNov 4, 2024 -
samtools Public
Forked from samtools/samtoolsTools (written in C using htslib) for manipulating next-generation sequencing data
C Other UpdatedMar 9, 2023 -
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bam-io-throughput Public
BAM I/O Throughput Benchmark
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GenomeWorks Public
Forked from NVIDIA-Genomics-Research/GenomeWorksSDK for GPU accelerated genome assembly and analysis
Cuda Apache License 2.0 UpdatedSep 3, 2021 -
BAMExtract Public
Extracts regions from a bam file and exports as in sam format
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just-the-docs Public
Forked from just-the-docs/just-the-docsA modern, high customizable, responsive Jekyll theme for documention with built-in search.
SCSS MIT License UpdatedSep 23, 2020 -
ggeyecandy Public
Various R scripts to generate appealing data visualizations
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haploclique Public
Forked from cbg-ethz/haplocliqueViral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
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PrimerIDTK Public
Toolkit for PrimerID NGS experiments
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split2del Public
Bioinformatics tool to merge split read alignments to reconstruct large deletions.
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seqalfixer Public
SequenceAlignmentFixer, a multitude of alignment statistics and fixes for Next Generation Sequencing (NGS) data. Computes consensus sequence with in-frame deletions and insertions.
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profilesim Public
Creating profiles for SimSeq from BAM alignments and a set of reference genomes.
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OligoMatcher Public
OligoMatcher finds all genes, which are target of an oligo.
Java GNU General Public License v3.0 UpdatedJul 5, 2012
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