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Lists (3)
Starred repositories
This script was made for the visualisation and identification of I2 icosahedral vertex coordinates in chimeraX.
Wiki Journey tracks your daily Wikipedia adventures and archives them in a tree format
A curated list of awesome computational cryo-EM methods.
A generative model for programmable protein design
Amortized inference for ab initio heterogeneous cryo-EM reconstruction
Software to divide data collected using Leginon into optics groups according to image shift
Makes RELION 3.1 Optics Groups from EPU AFIS data
Small application for exploring aliasing effects of CTF on data collection parameters
A virtual machine, assembler, and bytecode interpreter with interactive step-by-step execution; intended for teaching about how computers work
The programs of creating cryo-EM particle picking datasets
RoMa: A lightweight library to deal with 3D rotations in PyTorch.
PyTorch code for Vision Transformers training with the Self-Supervised learning method DINO
3D U-Net model for volumetric semantic segmentation written in pytorch
tensorboard for pytorch (and chainer, mxnet, numpy, ...)
Matplotlib styles for scientific plotting
Simple binary classification tool for cryo-EM and cryo-ET
Probabilistic Numerics in Python.
Zotero plugin to manage your attachments: automatically rename, move, and attach PDFs (or other files) to Zotero items, sync PDFs from your Zotero library to your (mobile) PDF reader (e.g. an iPad,…
GUI for analyzing Fourier space sampling in cryo-EM
Source code for "Unsupervised Object Representation Learning using Translation and Rotation Group Equivariant VAE," in pytorch. NeurIPS 2022