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Utilize wavelet transformation to obatin frequency information of gene expression.
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Acurately identify gene clusters with frequency information and deep generative model.
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Acurately identify gene markers with differential analysis based on frequency information.
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Expand the frequency information analysis to Spatial data.
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Expand the frequency information analysis to Multi-omics data and get frequency primed genes.
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Explore the bio-insight of the genes identified with frequency inforamtion.
- Python >= 3.7
- R >= 4.1.2
- R dependencies
- monocle3 >= 1.3.1
You may install GeneRhythm by the following command:
git clone https://github.com/mcgilldinglab/GeneRhythm.git
cd GeneRhythm
pip3 install -r requirements.txt
Please check the tutorial directory of the repository.