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@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

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  1. CellAgentChat CellAgentChat Public

    Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook 30 4

  2. MATES MATES Public

    A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook 27 2

  3. scSemiProfiler scSemiProfiler Public

    A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook 24 2

  4. scCross scCross Public

    A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python 15 2

  5. UNAGI UNAGI Public

    Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.

    Jupyter Notebook 15 4

  6. DENetwork DENetwork Public

    Unveiling Regulatory and Signaling Networks Behind Differentially-Expressed Genes

    Python 5

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