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Hardware/software 2D-3D backprojection on a SoPC platform

Published: 23 April 2006 Publication History

Abstract

The reduction of image reconstruction time is needed to spread the use of PET for research and routine clinical practice. In this purpose, this article presents a hardware/software architecture for the acceleration of 3D backprojection based upon an efficient 2D backprojection. This architecture has been designed in order to provide a high level of parallelism thanks to an efficient management of the memory accesses which would have been otherwise strongly slowed by the external memory. The reconstruction system is embedded in a SoPC platform (System on Programmable Chip), the new generation of reconfigurable circuit. The originality of this architecture comes from the design of a 2D Adaptative and Predictive Cache (2D-AP Cache) which has proved to be an efficient way to overcome the memory access bottleneck. Thanks to a hierarchical use of this cache, several backprojection operators can run in parallel, accelerating in this manner noteworthy the reconstruction process. This 2D reconstruction system will next be used to speed up 3D image reconstruction.

References

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M. S. Muscrok et al. Performance characteristics of a new generation of processing circuits for pet applications. IEEE Tr. Nucl. Sci., 50(4):974--978, August 2003.
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D. W. Shattuck, J. Rapela, E. Asma, A. Chatziioannu, J. Qi, and R. M. Leahy. Internet2-based 3D PET image reconstruction using a PC cluster. Phys. Med. Biol., 47(15):2785--2795, August 2002.
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S. Vollmar, C. Michel, J. T. Treffert, D. F. Newport, M. Casey, C. Knoss, K. Wienhard, X. Liu, M. Defrise, and W.-D. Heiss. Heinzelcluster accelerated reconstruction for FORE and OSEM3D. Phys. Med. Biol., 47(15):2651--2658, August 2002.
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I. Goddard and M. Trepanier. High-speed cone-beam reconstruction: An embedded systems approach. In Proc. SPIE Medical Imaging Conf., pages 483--491, February 2002.
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Nikolay Sorokin. An FPGA-Based 3D Backprojector. PhD thesis, Universitat des Saarlandes, Allemagne, 2003.
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M. Leeser, S. Coric, E. Miller, H. Yu, and M. Trepanier. Parallel-beam backprojection an FPGA implementation optimized for medical imaging. J. VLSI Signal Proc., 39(3):295--311, March 2005.
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F. Xu and K. Mueller. Ultra fast 3D filtered back projection on commodity graphics hardware. In Proc. IEEE Int. Symp. Biomedical Imaging (ISBI'04), pages 571--574, Arlington, USA, April 2004.
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S. Coric, M. Leeser, E. Miller, and M. Trepanier. Parallel-beam backprojection an FPGA implementation optimized for medical imaging. In Proc. ACM Int. Symp. Field-Programmable Gate Arrays (FPGA'02), pages 217--226, February 2002.

Cited By

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  • (2016)Cache-Aware GPU Optimization for Out-of-Core Cone Beam CT Reconstruction of High-Resolution VolumesIEICE Transactions on Information and Systems10.1587/transinf.2016EDP7174E99.D:12(3060-3071)Online publication date: 2016
  • (2012)Acceleration of CT reconstruction for wheat tiller inspection based on adaptive minimum enclosing rectangleComputers and Electronics in Agriculture10.1016/j.compag.2012.04.00485(123-133)Online publication date: 1-Jul-2012
  • (2011)Evaluation of the reconfiguration of the data acquisition system for 3D USCTInternational Journal of Reconfigurable Computing10.1155/2011/9529372011(1-9)Online publication date: 1-Jan-2011
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cover image ACM Conferences
SAC '06: Proceedings of the 2006 ACM symposium on Applied computing
April 2006
1967 pages
ISBN:1595931082
DOI:10.1145/1141277
Permission to make digital or hard copies of all or part of this work for personal or classroom use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. Copyrights for components of this work owned by others than ACM must be honored. Abstracting with credit is permitted. To copy otherwise, or republish, to post on servers or to redistribute to lists, requires prior specific permission and/or a fee. Request permissions from [email protected]

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New York, NY, United States

Publication History

Published: 23 April 2006

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Author Tags

  1. 3D reconstruction
  2. CAHC
  3. PET
  4. adequation algorithm architecture

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Cited By

View all
  • (2016)Cache-Aware GPU Optimization for Out-of-Core Cone Beam CT Reconstruction of High-Resolution VolumesIEICE Transactions on Information and Systems10.1587/transinf.2016EDP7174E99.D:12(3060-3071)Online publication date: 2016
  • (2012)Acceleration of CT reconstruction for wheat tiller inspection based on adaptive minimum enclosing rectangleComputers and Electronics in Agriculture10.1016/j.compag.2012.04.00485(123-133)Online publication date: 1-Jul-2012
  • (2011)Evaluation of the reconfiguration of the data acquisition system for 3D USCTInternational Journal of Reconfigurable Computing10.1155/2011/9529372011(1-9)Online publication date: 1-Jan-2011
  • (2010)High-performance cone beam reconstruction using CUDA compatible GPUsParallel Computing10.1016/j.parco.2010.01.00436:2-3(129-141)Online publication date: 1-Feb-2010
  • (2010)Accelerating simultaneous algebraic reconstruction technique with motion compensation using CUDA-enabled GPUInternational Journal of Computer Assisted Radiology and Surgery10.1007/s11548-010-0499-36:2(187-199)Online publication date: 30-Jun-2010
  • (2009)Parallel backprojectionEURASIP Journal on Embedded Systems10.1155/2009/7279652009(1-14)Online publication date: 1-Jan-2009
  • (2009)Design and Implementation a SOPC for FSB ControllerProceedings of the 2009 Second International Workshop on Computer Science and Engineering - Volume 0110.1109/WCSE.2009.732(563-567)Online publication date: 28-Oct-2009
  • (2009)Accelerating Algebraic Reconstruction Using CUDA-Enabled GPUProceedings of the 2009 Sixth International Conference on Computer Graphics, Imaging and Visualization10.1109/CGIV.2009.18(480-485)Online publication date: 11-Aug-2009
  • (2008)Accelerating cone beam reconstruction using the CUDA-enabled GPUProceedings of the 15th international conference on High performance computing10.5555/1791889.1791905(108-119)Online publication date: 17-Dec-2008
  • (2008)High speed 3D tomography on CPU, GPU, and FPGAEURASIP Journal on Embedded Systems10.1155/2008/9302502008(1-12)Online publication date: 1-Jan-2008
  • Show More Cited By

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