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Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree

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Algorithms in Bioinformatics (WABI 2013)

Part of the book series: Lecture Notes in Computer Science ((LNBI,volume 8126))

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Abstract

This paper presents two new deterministic algorithms for constructing consensus trees. Given an input of k phylogenetic trees with identical leaf label sets and n leaves each, the first algorithm constructs the majority rule (+) consensus tree in O(k n) time, which is optimal since the input size is Ω(k n), and the second one constructs the frequency difference consensus tree in min {O(k n 2), O(k n (k + log2 n))} time.

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Jansson, J., Shen, C., Sung, WK. (2013). Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree. In: Darling, A., Stoye, J. (eds) Algorithms in Bioinformatics. WABI 2013. Lecture Notes in Computer Science(), vol 8126. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-40453-5_12

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  • DOI: https://doi.org/10.1007/978-3-642-40453-5_12

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-40452-8

  • Online ISBN: 978-3-642-40453-5

  • eBook Packages: Computer ScienceComputer Science (R0)

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