Search Results (25)

Soil moisture (SM) monitoring in farmland at a regional scale is crucial for precision irrigation management and ensuring food security. However, existing methods for SM estimation encounter significant challenges related to accuracy, generalizability, and automation. This study proposes an integrated data fusion method to systematically assess the potential of three automated machine learning (AutoML) frameworks—tree-based pipeline optimization tool (TPOT), AutoGluon, and H2O AutoML—in retrieving SM. To evaluate the impact of input variables on estimation accuracy, six input scenarios were designed: multispectral data (MS), thermal infrared data (TIR), MS combined with TIR, MS with auxiliary data, TIR with auxiliary data, and a comprehensive combination of MS, TIR, and auxiliary data. The research was conducted in a winter wheat cultivation area within the People’s Victory Canal Irrigation Area, focusing on the 0–40 cm soil layer. The results revealed that the scenario incorporating all data types (MS + TIR + auxiliary) achieved the highest retrieval accuracy. Under this scenario, all three AutoML frameworks demonstrated optimal performance. AutoGluon demonstrated superior performance in most scenarios, particularly excelling in the MS + TIR + auxiliary data scenario. It achieved the highest retrieval accuracy with a Pearson correlation coefficient (R) value of 0.822, root mean square error (RMSE) of 0.038 cm³/cm³, and relative root mean square error (RRMSE) of 16.46%. This study underscores the critical role of input data types and fusion strategies in enhancing SM estimation accuracy and highlights the significant advantages of AutoML frameworks for regional-scale SM retrieval. The findings offer a robust technical foundation and theoretical guidance for advancing precision irrigation management and efficient SM monitoring. Full article

Background: Prostate cancer (PCa) diagnosis using MRI is often challenged by lesion variability. Methods: This study introduces Simplatab, an open-source automated machine learning (AutoML) framework designed for, but not limited to, automating the entire machine Learning pipeline to facilitate the detection of clinically significant prostate cancer (csPCa) using radiomics features. Unlike existing AutoML tools such as Auto-WEKA, Auto-Sklearn, ML-Plan, ATM, Google AutoML, and TPOT, Simplatab offers a comprehensive, user-friendly framework that integrates data bias detection, feature selection, model training with hyperparameter optimization, explainable AI (XAI) analysis, and post-training model vulnerabilities detection. Simplatab requires no coding expertise, provides detailed performance reports, and includes robust data bias detection, making it particularly suitable for clinical applications. Results: Evaluated on a large pan-European cohort of 4816 patients from 12 clinical centers, Simplatab supports multiple machine learning algorithms. The most notable features that differentiate Simplatab include ease of use, a user interface accessible to those with no coding experience, comprehensive reporting, XAI integration, and thorough bias assessment, all provided in a human-understandable format. Conclusions: Our findings indicate that Simplatab can significantly enhance the usability, accountability, and explainability of machine learning in clinical settings, thereby increasing trust and accessibility for AI non-experts. Full article

This study focuses on developing an hourly water level prediction model for small- and medium-sized agricultural reservoirs using the Tree-based Pipeline Optimization Tool (TPOT), an automated machine learning (AutoML) technique. The study area is the Baekhak Reservoir in South Korea, and various precipitation-related and reservoir water storage data were collected. Using these collected data, we compared widely used individual machine learning and deep learning models with the pipeline models generated by TPOT. The comparison showed that pipeline models, which included various preprocessing and ensemble techniques, exhibited higher predictive accuracy than individual machine learning and even deep learning models. The optimal pipeline model was evaluated for its performance in predicting water levels during an extreme rainfall event, demonstrating its effectiveness for hourly water level prediction. However, issues such as the overprediction of peak water levels and delays in predicting sudden water level changes were observed, likely due to inaccuracies in the ultra-short-term forecast precipitation data and the lack of information on reservoir operations (e.g., gate openings and drainage plans for agriculture). This study highlights the potential of AutoML techniques for use in hydrological modeling, and demonstrates their contribution to more efficient water management and flood prevention strategies in agricultural reservoirs. Full article

Soil erosion due to rainfall is a critical environmental issue in North Korea, exacerbated by deforestation and climate change. This study aims to estimate rainfall erosivity (RE) in North Korea using automated machine learning (AutoML), with a particular focus on regional soil erosion risks. North Korean data were sourced from the European Centre for Medium-Range Weather Forecasts (ECMWF) ReAnalysis 5 dataset, while South Korean data were obtained from the Korea Meteorological Administration. Data from 50 stations in South Korea (2013–2019) and 27 stations in North Korea (1980–2020) were used. The GradientBoostingRegressor (GBR) model, optimized using the Tree-based Pipeline Optimization Tool (TPOT), was trained on South Korean data. The model’s performance was evaluated using metrics such as the root mean square error (RMSE), mean absolute error (MAE), and coefficient of determination (R²), achieving high predictive accuracy across eight stations in South Korea. Using the optimized model, RE in North Korea was estimated, and the spatial distribution of RE was analyzed using the Kriging interpolation. Results reveal significant regional variability, with the southern and western areas displaying the highest erosivity. These findings provide valuable insights into soil erosion management and the development of sustainable agricultural and environmental strategies in North Korea. Full article

Automated Machine Learning (AutoML) enhances productivity and efficiency by automating the entire process of machine learning model development, from data preprocessing to model deployment. These tools are accessible to users with varying levels of expertise and enable efficient, scalable, and accurate classification across different applications. This paper evaluates two popular AutoML tools, the Tree-Based Pipeline Optimization Tool (TPOT) version 0.10.2 and Konstanz Information Miner (KNIME) version 5.2.5, comparing their performance in a classification task. Specifically, this work analyzes autism spectrum disorder (ASD) detection in toddlers as a use case. The dataset for ASD detection was collected from various rehabilitation centers in Pakistan. TPOT and KNIME were applied to the ASD dataset, with TPOT achieving an accuracy of 85.23% and KNIME achieving 83.89%. Evaluation metrics such as precision, recall, and F1-score validated the reliability of the models. After selecting the best models with optimal accuracy, the most important features for ASD detection were identified using these AutoML tools. The tools optimized the feature selection process and significantly reduced diagnosis time. This study demonstrates the potential of AutoML tools and feature selection techniques to improve early ASD detection and outcomes for affected children and their families. Full article

Reliable streamflow forecasting is crucial for several tasks related to water-resource management, including planning reservoir operations, power generation via Hydroelectric Power Plants (HPPs), and flood mitigation, thus resulting in relevant social implications. The present study is focused on the application of Automated Machine-Learning (AutoML) models to forecast daily streamflow in the area of the upper Teles Pires River basin, located in the region of the Amazon biomes. The latter area is characterized by extensive water-resource utilization, mostly for power generation through HPPs, and it has a limited hydrological data-monitoring network. Five different AutoML models were employed to forecast the streamflow daily, i.e., auto-sklearn, Tree-based Pipeline Optimization Tool (TPOT), H2O AutoML, AutoKeras, and MLBox. The AutoML input features were set as the time-lagged streamflow and average rainfall data sourced from four rain gauge stations and one streamflow gauge station. To overcome the lack of training data, in addition to the previous features, products estimated via remote sensing were leveraged as training data, including PERSIANN, PERSIANN-CCS, PERSIANN-CDR, and PDIR-Now. The selected AutoML models proved their effectiveness in forecasting the streamflow in the considered basin. In particular, the reliability of streamflow predictions was high both in the case when training data came from rain and streamflow gauge stations and when training data were collected by the four previously mentioned estimated remote-sensing products. Moreover, the selected AutoML models showed promising results in forecasting the streamflow up to a three-day horizon, relying on the two available kinds of input features. As a final result, the present research underscores the potential of employing AutoML models for reliable streamflow forecasting, which can significantly advance water-resource planning and management within the studied geographical area. Full article

Background: This study aims to assess the efficacy of combining automated machine learning (AutoML) and explainable artificial intelligence (XAI) in identifying metabolomic biomarkers that can differentiate between hepatocellular carcinoma (HCC) and liver cirrhosis in patients with hepatitis C virus (HCV) infection. Methods: We investigated publicly accessible data encompassing HCC patients and cirrhotic controls. The TPOT tool, which is an AutoML tool, was used to optimize the preparation of features and data, as well as to select the most suitable machine learning model. The TreeSHAP approach, which is a type of XAI, was used to interpret the model by assessing each metabolite’s individual contribution to the categorization process. Results: TPOT had superior performance in distinguishing between HCC and cirrhosis compared to other AutoML approaches AutoSKlearn and H2O AutoML, in addition to traditional machine learning models such as random forest, support vector machine, and k-nearest neighbor. The TPOT technique attained an AUC value of 0.81, showcasing superior accuracy, sensitivity, and specificity in comparison to the other models. Key metabolites, including L-valine, glycine, and DL-isoleucine, were identified as essential by TPOT and subsequently verified by TreeSHAP analysis. TreeSHAP provided a comprehensive explanation of the contribution of these metabolites to the model’s predictions, thereby increasing the interpretability and dependability of the results. This thorough assessment highlights the strength and reliability of the AutoML framework in the development of clinical biomarkers. Conclusions: This study shows that AutoML and XAI can be used together to create metabolomic biomarkers that are specific to HCC. The exceptional performance of TPOT in comparison to traditional models highlights its capacity to identify biomarkers. Furthermore, TreeSHAP boosted model transparency by highlighting the relevance of certain metabolites. This comprehensive method has the potential to enhance the identification of biomarkers and generate precise, easily understandable, AI-driven solutions for diagnosing HCC. Full article

Endocrine-disrupting chemicals (EDCs) are chemicals that can interfere with homeostatic processes. They are a major concern for public health, and they can cause adverse long-term effects such as cancer, intellectual impairment, obesity, diabetes, and male infertility. The endocrine system is a complex machinery, with the estrogen (E), androgen (A), and thyroid hormone (T) modes of action being of major importance. In this context, the availability of in silico models for the rapid detection of hazardous chemicals is an effective contribution to toxicological assessments. We developed Qualitative Gene expression Activity Relationship (QGexAR) models to predict the propensities of chemically induced disruption of EAT modalities. We gathered gene expression profiles from the LINCS database tested on two cell lines, i.e., MCF7 (breast cancer) and A549 (adenocarcinomic human alveolar basal epithelial). We optimized our prediction protocol by testing different feature selection methods and classification algorithms, including CATBoost, XGBoost, Random Forest, SVM, Logistic regression, AutoKeras, TPOT, and deep learning models. For each EAT endpoint, the final prediction was made according to a consensus prediction as a function of the best model obtained for each cell line. With the available data, we were able to develop a predictive model for estrogen receptor and androgen receptor binding and thyroid hormone receptor antagonistic effects with a consensus balanced accuracy on a validation set ranging from 0.725 to 0.840. The importance of each predictive feature was further assessed to identify known genes and suggest new genes potentially involved in the mechanisms of action of EAT perturbation. Full article

The escalating reliance of modern society on information and communication technology has rendered it vulnerable to an array of cyber-attacks, with distributed denial-of-service (DDoS) attacks emerging as one of the most prevalent threats. This paper delves into the intricacies of DDoS attacks, which exploit compromised machines numbering in the thousands to disrupt data services and online commercial platforms, resulting in significant downtime and financial losses. Recognizing the gravity of this issue, various detection techniques have been explored, yet the quantity and prior detection of DDoS attacks has seen a decline in recent methods. This research introduces an innovative approach by integrating evolutionary optimization algorithms and machine learning techniques. Specifically, the study proposes XGB-GA Optimization, RF-GA Optimization, and SVM-GA Optimization methods, employing Evolutionary Algorithms (EAs) Optimization with Tree-based Pipelines Optimization Tool (TPOT)-Genetic Programming. Datasets pertaining to DDoS attacks were utilized to train machine learning models based on XGB, RF, and SVM algorithms, and 10-fold cross-validation was employed. The models were further optimized using EAs, achieving remarkable accuracy scores: 99.99% with the XGB-GA method, 99.50% with RF-GA, and 99.99% with SVM-GA. Furthermore, the study employed TPOT to identify the optimal algorithm for constructing a machine learning model, with the genetic algorithm pinpointing XGB-GA as the most effective choice. This research significantly advances the field of DDoS attack detection by presenting a robust and accurate methodology, thereby enhancing the cybersecurity landscape and fortifying digital infrastructures against these pervasive threats. Full article

Maritime ports play a pivotal role in fostering the growth of domestic and international trade and economies. As ports continue to expand in size and capacity, the impact of their operations on air quality and climate change becomes increasingly significant. While nearby regions may experience economic benefits, there are significant concerns regarding the emission of atmospheric pollutants, which have adverse effects on both human health and climate change. Predictive modeling of port emissions can serve as a valuable tool in identifying areas of concern, evaluating the effectiveness of emission reduction strategies, and promoting sustainable development within ports. The primary objective of this research is to utilize machine learning frameworks to estimate the emissions of SO₂ from ships during various port activities, including hoteling, maneuvering, and cruising. By employing these models, we aim to gain insights into the emission patterns and explore strategies to mitigate their impact. Through our analysis, we have identified the most effective models for estimating SO₂ emissions. The AutoML TPOT framework emerges as the top-performing model, followed by Non-Linear Regression with interaction effects. On the other hand, Linear Regression exhibited the lowest performance among the models evaluated. By employing these advanced machine learning techniques, we aim to contribute to the body of knowledge surrounding port emissions and foster sustainable practices within the maritime industry. Full article

This article studies the development of a reliable AI model to detect fraudulent bank transactions, including money laundering, and illegal activities with goods and services. The proposed machine learning model uses the CreditCardFraud dataset and utilizes multiple algorithms with different parameters. The results are evaluated using Accuracy, Precision, Recall, F1 score, and IBA. We have increased the reliability of the imbalanced classification of fraudulent credit card transactions in comparison to the best known results by using the Tomek links resampling algorithm of the imbalanced CreditCardFraud dataset. The reliability of the results, using the proposed model based on the TPOT and RandomForest algorithms, has been confirmed by using 10-fold cross-validation. It is shown that on the dataset the accuracy of the proposed model detecting fraudulent bank transactions reaches 99.99%. Full article

An accurate prediction of the hepatotoxicity associated with low-dose methotrexate can provide evidence for a reasonable treatment choice. This study aimed to develop a machine learning-based prediction model to predict hepatotoxicity associated with low-dose methotrexate and explore the associated risk factors. Eligible patients with immune system disorders, who received low-dose methotrexate at West China Hospital between 1 January 2018, and 31 December 2019, were enrolled. A retrospective review of the included patients was conducted. Risk factors were selected from multiple patient characteristics, including demographics, admissions, and treatments. Eight algorithms, including eXtreme Gradient Boosting (XGBoost), AdaBoost, CatBoost, Gradient Boosting Decision Tree (GBDT), Light Gradient Boosting Machine (LightGBM), Tree-based Pipeline Optimization Tool (TPOT), Random Forest (RF), and Artificial Neural Network (ANN), were used to establish the prediction model. A total of 782 patients were included, and hepatotoxicity was detected in 35.68% (279/782) of the patients. The Random Forest model with the best predictive capacity was chosen to establish the prediction model (receiver operating characteristic curve 0.97, accuracy 64.33%, precision 50.00%, recall 32.14%, and F1 39.13%). Among the 15 risk factors, the highest score was a body mass index of 0.237, followed by age (0.198), the number of drugs (0.151), and the number of comorbidities (0.144). These factors demonstrated their importance in predicting hepatotoxicity associated with low-dose methotrexate. Using machine learning, this novel study established a predictive model for low-dose methotrexate-related hepatotoxicity. The model can improve medication safety in patients taking methotrexate in clinical practice. Full article

Sea surface salinity (SSS) is one of the most important basic parameters for studying the oceanographic processes and is of great significance in identifying oceanic currents. However, for a long time, the salinity observation in the estuary and coastal waters has not been well resolved due to the technology limitation. In this study, the SSS inversion models for the Changjiang Estuary and the adjacent sea waters were established based on machine learning methods, using SMAP (Soil Moisture Active and Passive) salinity data combined with the specific bands and bands ratios of MODIS (Moderate Resolution Imaging Spectroradiometer). The performance of the three machine learning methods (Random Forest, Particle Swarm Optimization Support Vector Regression (PSO-SVR) and Automatic Machine Learning (TPOT)) are compared with accuracy verification by the in-situ measured SSS. Random Forest is proven to be effective for the SSS inversion in flood season, whereas TPOP performs the best for the dry season. The machine learning-based models effectively solve the problem of insufficient time span of SSS observation from salinity satellites. At the same time, an empirical algorithm was established for the SSS inversion for the sea areas with low salinity (<30 psu) where the machine learning based model fails with great errors. The average deviation of the complex SSS inversion models is −0.86 psu, validated with Copernicus Global Ocean Reanalysis Data. The long term series SSS dataset of March and August from 2003 to 2020 was then constructed to observe the salinity distribution characteristics of the flood season and the dry season, respectively. It is indicated that the distribution pattern of CDW can be divided into three categories: northeast-oriented expansion pattern, multi direction isotropic expansion pattern, and a turn pattern of which CDW shows changing direction, namely the northeast-southeast expansion pattern. The pattern of CDW expansion is indicated to be the comprehensive effect of the interaction of different currents. In addition, it is noteworthy that CDW shows increasing expansion with decreasing SSS in the front plume, especially in the flood season. This study not only gives a feasible solution for effective SSS observation, but also provides a dataset of basic oceanographic parameters for studying the coastal biogeochemical processes, evolution of land-sea interaction, and changing trend of material and energy transport by the CDW in the west Pacific boundary. Full article

Radiomics is the process of extracting useful quantitative features of high-dimensional data that allows for automated disease classification, including atherosclerotic disease. Hence, this study aimed to quantify and extract the radiomic features from Coronary Computed Tomography Angiography (CCTA) images and to evaluate the performance of automated machine learning (AutoML) model in classifying the atherosclerotic plaques. In total, 202 patients who underwent CCTA examination at Institut Jantung Negara (IJN) between September 2020 and May 2021 were selected as they met the inclusion criteria. Three primary coronary arteries were segmented on axial sectional images, yielding a total of 606 volume of interest (VOI). Subsequently, the first order, second order, and shape order of radiomic characteristics were extracted for each VOI. Model 1, Model 2, Model 3, and Model 4 were constructed using AutoML-based Tree-Pipeline Optimization Tools (TPOT). The heatmap confusion matrix, recall (sensitivity), precision (PPV), F1 score, accuracy, receiver operating characteristic (ROC), and area under the curve (AUC) were analysed. Notably, Model 1 with the first-order features showed superior performance in classifying the normal coronary arteries (F1 score: 0.88; Inverse F1 score: 0.94), as well as in classifying the calcified (F1 score: 0.78; Inverse F1 score: 0.91) and mixed plaques (F1 score: 0.76; Inverse F1 score: 0.86). Moreover, Model 2 consisting of second-order features was proved useful, specifically in classifying the non-calcified plaques (F1 score: 0.63; Inverse F1 score: 0.92) which are a key point for prediction of cardiac events. Nevertheless, Model 3 comprising the shape-based features did not contribute to the classification of atherosclerotic plaques. Overall, TPOT shown promising capabilities in terms of finding the best pipeline and tailoring the model using CCTA-based radiomic datasets. Full article

Cognitive decline is one of the primary concerns in the elderly population. Serious games have been used for different purposes related to elderly care, such as physical therapy, cognitive training and mood management. There has been scientific evidence regarding the relationship between cognition and the autonomic nervous system (ANS) through heart rate variability (HRV). This paper explores the changes in the ANS among elderly people of normal and impaired cognition through measured HRV. Forty-eight subjects were classified into two groups: normal cognition (NC) (n = 24) and mild cognitive impairment (MCI) (n = 24). The subjects went through the following experiment flow: rest for 3 min (Rest 1), play a cognitive aptitude game (Game 1), rest for another 3 min (Rest 2), then play two reaction-time games (Game 2&3). Ten HRV features were extracted from measured electrocardiography (ECG) signals. Based on statistical analysis, there was no significant difference on the HRV between the two groups, but the experiment sessions do have a significant effect. There was no significant interaction between sessions and cognitive status. This implies that the HRV between the two groups have no significant difference, and they will experience similar changes in their HRV regardless of their cognitive status. Based on the game performance, there was a significant difference between the two groups of elderly people. Tree-based pipeline optimization tool (TPOT) was used for generating a machine learning pipeline for classification. Classification accuracy of 68.75% was achieved using HRV features, but higher accuracies of 83.33% and 81.20% were achieved using game performance or both HRV and game performance features, respectively. These results show that HRV has the potential to be used for detection of mild cognition impairment, but game performance can yield better accuracy. Thus, serious games have the potential to be used for assessing cognitive decline among the elderly. Full article