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WO2013160413A1 - Use of lactic acid bacteria for preparing fermented food products with increased natural sweetness - Google Patents

Use of lactic acid bacteria for preparing fermented food products with increased natural sweetness Download PDF

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Publication number
WO2013160413A1
WO2013160413A1 PCT/EP2013/058655 EP2013058655W WO2013160413A1 WO 2013160413 A1 WO2013160413 A1 WO 2013160413A1 EP 2013058655 W EP2013058655 W EP 2013058655W WO 2013160413 A1 WO2013160413 A1 WO 2013160413A1
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Prior art keywords
strain
streptococcus thermophilus
strains
bulgaricus
milk
Prior art date
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PCT/EP2013/058655
Other languages
French (fr)
Inventor
Eric Johansen
Kim Ib Soerensen
Mirjana CURIC-BAWDEN
Mette Pia JUNGE
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Chr. Hansen A/S
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First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=48227263&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=WO2013160413(A1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Priority to MX2014012235A priority Critical patent/MX367899B/en
Priority to US14/396,249 priority patent/US11044920B2/en
Priority to DK13719516.0T priority patent/DK2841557T4/en
Priority to EP13719516.0A priority patent/EP2841557B2/en
Priority to BR112014026580-1A priority patent/BR112014026580B1/en
Priority to UAA201412639A priority patent/UA118250C2/en
Priority to CN201380022188.3A priority patent/CN104254600B/en
Application filed by Chr. Hansen A/S filed Critical Chr. Hansen A/S
Priority to ES13719516T priority patent/ES2765177T5/en
Priority to KR1020147033152A priority patent/KR102114408B1/en
Priority to EA201491951A priority patent/EA033795B1/en
Priority to JP2015507540A priority patent/JP6767114B2/en
Publication of WO2013160413A1 publication Critical patent/WO2013160413A1/en
Priority to HK15107586.8A priority patent/HK1207110A1/en
Priority to US16/655,806 priority patent/US11076609B2/en
Priority to US17/389,986 priority patent/US20220061348A1/en

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    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23CDAIRY PRODUCTS, e.g. MILK, BUTTER OR CHEESE; MILK OR CHEESE SUBSTITUTES; MAKING THEREOF
    • A23C9/00Milk preparations; Milk powder or milk powder preparations
    • A23C9/12Fermented milk preparations; Treatment using microorganisms or enzymes
    • A23C9/123Fermented milk preparations; Treatment using microorganisms or enzymes using only microorganisms of the genus lactobacteriaceae; Yoghurt
    • A23C9/1238Fermented milk preparations; Treatment using microorganisms or enzymes using only microorganisms of the genus lactobacteriaceae; Yoghurt using specific L. bulgaricus or S. thermophilus microorganisms; using entrapped or encapsulated yoghurt bacteria; Physical or chemical treatment of L. bulgaricus or S. thermophilus cultures; Fermentation only with L. bulgaricus or only with S. thermophilus
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23CDAIRY PRODUCTS, e.g. MILK, BUTTER OR CHEESE; MILK OR CHEESE SUBSTITUTES; MAKING THEREOF
    • A23C19/00Cheese; Cheese preparations; Making thereof
    • A23C19/02Making cheese curd
    • A23C19/032Making cheese curd characterised by the use of specific microorganisms, or enzymes of microbial origin
    • A23C19/0323Making cheese curd characterised by the use of specific microorganisms, or enzymes of microbial origin using only lactic acid bacteria, e.g. Pediococcus and Leuconostoc species; Bifidobacteria; Microbial starters in general
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23CDAIRY PRODUCTS, e.g. MILK, BUTTER OR CHEESE; MILK OR CHEESE SUBSTITUTES; MAKING THEREOF
    • A23C9/00Milk preparations; Milk powder or milk powder preparations
    • A23C9/12Fermented milk preparations; Treatment using microorganisms or enzymes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20Bacteria; Culture media therefor
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/01Preparation of mutants without inserting foreign genetic material therein; Screening processes therefor
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/74Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
    • C12N15/746Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora for lactic acid bacteria (Streptococcus; Lactococcus; Lactobacillus; Pediococcus; Enterococcus; Leuconostoc; Propionibacterium; Bifidobacterium; Sporolactobacillus)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1205Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23VINDEXING SCHEME RELATING TO FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES AND LACTIC OR PROPIONIC ACID BACTERIA USED IN FOODSTUFFS OR FOOD PREPARATION
    • A23V2400/00Lactic or propionic acid bacteria
    • A23V2400/11Lactobacillus
    • A23V2400/123Bulgaricus
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23VINDEXING SCHEME RELATING TO FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES AND LACTIC OR PROPIONIC ACID BACTERIA USED IN FOODSTUFFS OR FOOD PREPARATION
    • A23V2400/00Lactic or propionic acid bacteria
    • A23V2400/21Streptococcus, lactococcus
    • A23V2400/249Thermophilus
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02EREDUCTION OF GREENHOUSE GAS [GHG] EMISSIONS, RELATED TO ENERGY GENERATION, TRANSMISSION OR DISTRIBUTION
    • Y02E50/00Technologies for the production of fuel of non-fossil origin
    • Y02E50/10Biofuels, e.g. bio-diesel

Definitions

  • the present invention relates to Streptococcus thermophilus bacteria strains and cultures with a sweetening property by excretion of high levels of glucose formed by degradation of lactose, Lactobacillus delbrueckii subsp, bulgaricus bacteria strains with a sweetening property by excretion of high levels of glucose formed by degradation of lactose, starter cultures comprising such strains, and dairy products fermented with the cultures,
  • the present invention also relates to a method of obtaining such strains and the use of such strains for the preparation of fermented milk products and for increasing the sweetness of fermented milk products while decreasing the lactose content of the fermented milk products.
  • the food industry has an increasingly high demand for low-calorie sweet-tasting food products in order to help overcome the overweight and obesity problems that have become so prevalent in the last 20 years.
  • Sweetness usually regarded as a pleasurable sensation, is produced by the presence of sugars and a few other substances.
  • the perception of sugars is very different. Using sucrose as a 100 refer ⁇ ence, the sweetness of lactose is 16, of galactose 32 and of glucose 74 (Godshall (1988). Food Technology 42(11) : 71-78). Glucose is thus perceived more than 4 times sweeter than lactose while still having approximately the same level of calories.
  • sugar in fermented food products is more often being replaced with sweeteners such as aspartame, acesulfame K, sucralose and saccharin which can provide the sweetness with a lower intake of calories.
  • sweeteners such as aspartame, acesulfame K, sucralose and saccharin which can provide the sweetness with a lower intake of calories.
  • the use of artificial sweeteners may result in an off-taste and several studies indicating that the consumption of artificial sweeteners are connected with drawbacks, such as increasing hunger, allergies, cancer etc., have contributed to consumer's preference for fermented milk products which only contain natural sweeteners or, preferably, contain no added sweetener.
  • a special challenge lies in developing fermented milk products where the natural (inner) sweetness is high.
  • the acidity of fermented milk products depend in large part on the lactic acid bacteria present and the process parameters used for preparing the fermented milk product.
  • lactose is cleaved by ⁇ -galactosidase into glucose and galactose after uptake.
  • the glucose is phosphorylated by glucokinase to glucose-6-phosphate and fermented via the Embden-Meyerhof-Parnas pathway (glycolysis) by most lactic acid bacteria ( Figure 1).
  • Streptococcus thermophHus is one of the most widely used lactic acid bacteria for commercial thermophilic milk fermentation where the organism is normally used as part of a mixed starter culture, the other component being a Lactobacillus sp., e.g. Lactobacillus delbrueckli subsp. bulgaricus for yoghurt or Lactobacillus helvet- icus for Swiss-type cheese.
  • Lactobacillus sp. e.g. Lactobacillus delbrueckli subsp. bulgaricus for yoghurt or Lactobacillus helvet- icus for Swiss-type cheese.
  • the legal definition of yoghurt in many countries requires Streptococcus thermophHus alongside Lactobacillus delbrueckli subsp. bulgaricus. Both species generate desirable amounts of acetaldehyde, an important flavor component in yo ⁇ ghurt.
  • Lactose and sucrose are fermented more readily by Streptococcus thermophHus than their component monosaccharides.
  • the glucose portion of the lactose molecule is fermented and galactose accumulates in fermented milk products when Streptococcus thermophHus is used.
  • free galactose In yo ⁇ ghurt wherein high acid concentrations limit the fermentation, free galactose re- mains while the free galactose produced in the early stages of Swiss cheese manufacture is later fermented by Lactobacillus helveticus.
  • mutants have several disadvantages compared to their parent strain which makes them unsuitable for inclusion in a commercial starter culture.
  • the cell yield of the mutants was half that of the parent strain per mole of lactose fermented and the doubling time was significantly increased in the mutants when grown on lactose.
  • the yield of lactic acid was half that of the parent strain per mole of lactose fermented.
  • the behavior of these strains in milk was not analyzed but it is anticipated that the rate of acidification would be signif- icantly reduced.
  • Lactococcus lactis is generally not chosen for acetaldehyde production and does not contribute to the fulfillment of the requirements for the legal definition of yoghurt. Chervaux et al. (2000. Appi.
  • Microbiol, 66, 5306-5311 studied the physiology of Lactobacillus delbrueckii subsp, bulgaricus strains in a novel chemically defined medium and isolated 2-deoxyglucose- resistant mutants that were deficient in glucose fermentation. Several different phenotypes were observed and strain -specific effects were reported.
  • Streptococcus thermophilus strains with a mutation in the glucokinase (glcK) gene can be selected by exposure of galactose-fermenting Streptococcus thermophilus strains to 2-deoxygluxose and that these cells digest lactose and galactose and excrete glucose to the environment when grown on a milk substrate.
  • glcK glucokinase
  • the present invention provides 2-deoxyglucose- resistant mutants of Lactobacillus delbrueckii subsp. bulgaricus which have either lost the ability to grow on glucose as carbon source or exhibit an impaired ability to grow under such conditions.
  • buigaricus not only do not consume glucose secreted Into the milk by other microorganisms that might be present, they also excrete high amounts of glucose into the surrounding medium and are, surprisingly, still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. They are therefore as such useful in fermented milk applications.
  • Such food grade bacteria can be used to fortify fermented milk products with glucose, Glucose has a higher perceived sweetness than both lactose and galactose and as such the excretion of glucose to the milk substrate will result in a higher perceived (inner) sweetness in the fermented milk product.
  • the inventors of the present invention found that when a milk substrate is fermented with a Streptococcus thermophilus strain and a Lactobacillus delbrueckii subsp. buigaricus strain according to the invention the lactose level within the milk decreases significantly.
  • Lactose intolerance is a condition caused by the inability to digest lactose. Most lactose-intolerant individuals can tolerate some amount of lactose in their diet and the severity of their symptoms (including nausea, cramping, bloating, diarrhea, and flatulence) increases with the amount of lactose consumed.
  • the dairy industry today faces a problem of providing an alternative to adding sweeteners to fermented milk products in order to achieve the desired sweet taste without the added calories. Furthermore, it would be highly advantageous to es- tablish a method for reducing lactose in fermented milk products to a level which will be acceptable for lactose- intolerant consumers.
  • the above problems have been solved by providing mutant Streptococcus ther- mophilus strains and mutant Lactobacillus delbrueckii subsp.
  • bulgaricus strains that excrete glucose into the milk when 9.5% B-milk is inoculated with 10 6 -10 7 CFU/ml of a Streptococcus ⁇ hemophilus strain according to the invention or with 10 6 -10 7 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Streptococcus thermophilus strains or the Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention at 40°C for at least 20 hours.
  • such mutant strains alone will excrete at least 5 mg/ml glucose into B-milk when 9.5% B-milk is inoculated with 10 6 -10 7 CFU/ml of a Streptococcus thermophilus strain according to the invention or with 10 6 -10 7 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Streptococcus thermophilus strains or the Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention at 40°C for at least 20 hours.
  • the strains are still fully capable of acidifying milk alt- hough acidification time to pH 5 is delayed by 2-5 hours.
  • the final fermented milk contains less than 15 mg/ml lactose in the fermented milk.
  • the final fermented milk consequently has a higher inner sweetness index of approximately 2 fold or more.
  • the present inventors have found a method of isolating 2-deoxyglucose resistant mutant strains from a galac- tose-fermenting Streptococcus thermophilus mother strain, preferably one with a mutation in the galactose operon which increases the expression of a previously lowly expressed or not expressed operon, wherein the 2-deoxyglucose resistance phenotype is caused by a mutation in the glucokinase (glcK) gene that partially or totally inactivates the encoded protein.
  • glcK glucokinase
  • the method comprises subjecting the mother strain to 2-deoxyglucose and selecting mutant strains that are able to grow in the presence of 2-deoxyglucose on agar plates containing M17 medi- um+2%galactose, such as described in Example 1 herein. These mutants are screened and strains that have a growth rate which is higher in M17 medium +2% galactose than in M 17 medium+2% glucose are chosen.
  • mutant strains of Streptococcus thermophilus with a mutation in the glucokinase gene (glck) but with an apparently normally functioning glucose transporter system were secreting glucose.
  • These mutants were named, CHCC15757 and CHCC15887.
  • strains of Streptococcus thermophilus with an even higher capability for fermentation of lactose and excretion of glucose could be selected by subjecting the strains of Streptococcus thermophilus with a mutation in the glucokinase gene to 2-deoxyglucose and selecting strains which are unable to grow in 9,5% B-milk except when sucrose is added to the B-milk in a concentration of as little as 0.01 %.
  • CHCC16404 hyper-lactose fermenting and glucose secreting mutant was named CHCC16404.
  • CHCC16404 has a mutation in a glucose transporter gene (mariM) resulting in the inactivation of a glucose transporter protein responsible for transport of glucose into the cell,
  • the present inventors have found a method of isolating 2-deoxyglucose resistant mutant strains of a Lactobacillus delbrueckii subsp. bulgaricus mother strain, which has either lost the ability to grow on glucose as carbon source or has an impaired ability to grow on glucose as carbon source.
  • the method comprises subjecting the mother strain to 2-deoxyglucose and selecting mutant strains that are able to grow in the presence of 2-deoxyglucose on agar plates containing MRS-IM medium containing 2% lactose, such as described in Example 5 herein.
  • the present invention relates to novel strains of lactic acid bacteria, such as in particular Streptococcus thermophilus with a mutation in the glcK gene or Lactobacillus delbrueckii subsp. bulgaricus mutants, that excrete glucose into the fermented product to provide a natural sweetness without extra calories, a method for producing the strains, fermented milk products made using such strains and use of such strains for preparing fermented milk products with increased sweetness and decreased levels of lactose.
  • novel strains of lactic acid bacteria such as in particular Streptococcus thermophilus with a mutation in the glcK gene or Lactobacillus delbrueckii subsp. bulgaricus mutants, that excrete glucose into the fermented product to provide a natural sweetness without extra calories
  • Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus strains of the invention were, surprisingly, found to boost the growth of Bifidobacterium animalis subsp. lactis strain BB-12®, a pro bi otic bacterium which does not grow well when present alone in milk.
  • FIGURE 1 is a schematic representation of lactose catabolism in Streptococcus thermophilus.
  • GIcK glucokinase
  • LacS lactose transporter
  • LacZ ⁇ -galactosidase
  • GalM mutarotase
  • GalK galactokinase
  • GalT galactose- 1-phosphate uridyltrans- ferase
  • GalE UDP-glucose 4 epimerase
  • GallP galactose- 1-phosphate.
  • FIGURE 2 depicts the DNA sequence (SEQ ID NO. 1) of the glucokinase gene (glcK) of Streptococcus thermophilus as well as the encoded amino acid sequence (SEQ ID NO. 2). The single nucleotide substitutions found in CHCC15757 and CHCC15887, respectively, are indicated.
  • FIGURE 3 depicts the man operon encoding the glucose/mannose phosphotransferase system (PTS) in Streptococcus thermophilus.
  • PTS glucose/mannose phosphotransferase system
  • CHCC15757 the hyper-lactose fermenting and glucose secreting mutant CHCC16404 was found to have a mutation in the manM gene encoding the IIC Ma " protein of the glucose/mannose PTS.
  • the G to T mutation changes the GAA codon for glutamic acid at amino acid position 209 to a TAA stop codon (*) aborting translation in CHCC16404 and inactivating the function of the protein.
  • FIGURE 4 depicts the DNA sequence (SEQ ID NO. 5) of the manM gene of Strepto ⁇ coccus thermophilus strain CHCC15757 as well as the encoded amino acid se ⁇ quence (SEQ ID NO. 6). The single nucleotide substitution found in CHCC16404 is indicated.
  • lactic acid bacterium designates a gram- positive, mi- croaerophilic or anaerobic bacterium, which ferments sugars with the production of acids including lactic acid as the predominantly produced acid, acetic acid and propionic acid.
  • the industrially most useful lactic acid bacteria are found within the order "Lactobacillales” which includes Lactococcus spp., Streptococcus spp., Lactobacillus spp., Leuconostoc spp., Pediococcus spp., Brevibacterium spp., En- terococcus spp. and Propionibacterium spp.
  • Lactic acid bacteria including bacteria of the species Lactobacillus sp. and Streptococcus thermophilus
  • DVS Direct Vat Set
  • Such cultures are in general referred to as “starter cultures” or “starters”.
  • yoghurt In some countries, the legal definition of yoghurt requires the presence of both Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus. Both species generate desirable amounts of acetaldehyde, an important flavor compo ⁇ nent in yoghurt.
  • Streptococcus thermophilus is one of the most widely used lactic acid bacteria for commercial milk fermentation where the organism is normally used as part of a mixed starter culture, the other component being a Lactobacillus sp., e.g. Lacto- bacillus delbrueckii subsp. bulgaricus for yoghurt and Lactobacillus helveticus for Swiss- type cheese.
  • Lactose and sucrose are fermented more readily by Streptococcus thermophilus than their component monosaccharides. Only the glucose portion of the lactose molecule is fermented by Streptococcus thermophilus and galactose accumulates in fermented milk products when Streptococcus thermophilus is used. In yoghurt, wherein high acid concentrations limit the fermentation, free galactose remains while the free galactose produced in the early stages of Swiss cheese manufacture Is later fermented by Lactobacillus helveticus, Lactococcus lactis found in many starter cultures used for cheese manufacture is also capable of consuming the galactose produced by Streptococcus thermophilus.
  • the present inventors have exposed g a lactose-fermenting strains of Streptococcus thermophilus to the selective agent 2-deoxyglucose.
  • 2-deoxyglucose resistant mutants have mutations in the gene encoding glucokinase and in genes coding for glucose transport.
  • the isolated mutants, CHCC15757, CHCC15887 and CHCC16404, which are resistant to 2-deoxyglucose have mutations in their glucokinase (glcK) gene.
  • glcK glucokinase
  • the present inventors found that CHCC16404 has a stop codon mutation in a glucose/mannose transporter gene which could explain why exported glucose is not transported back into the cells again.
  • mutants alone are still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. They are therefore as such useful in fermented milk applications and they have preserved the ability of the mother strains to clot the milk which is characteristic of yoghurt.
  • the final fermented milk has a higher inner sweetness index of at least 2.0 calculated as described by Godshall (1988. Food Technology 42(11) :71- 78).
  • the first aspect of the present invention thus, relates to a galactose-fermenting mutant strain of Streptococcus thermophilics, wherein the mutant strain carries a mutation in the DNA sequence of the glcK gene encoding a glucokinase protein, wherein the mutation inactivates the encoded glucokinase protein or has a nega- tive effect on expression of the gene.
  • Methods for measuring the level of glucokinase activity or the level of expression of the glucokinase gene are readily known (Porter et al. (1982) Biochim. Biophys. Acta, 709; 178-186) and include enzyme assays with commercially available kits and transcriptomics or quantitative PCR using materials which are readily available,
  • a bacterial "strain” as used herein refers to a bacterium which remains genetically unchanged when grown or multiplied. A multiplicity of identical bacteria are included.
  • the term "galactose-fermenting Streptococcus thermophilics strains” as used herein refers to Streptococcus thermophilus strains which are capable of growth on/in M17 medium+2% galactose.
  • the galactose-fermenting Streptococcus thermophilus strains are defined herein as Streptococcus thermophilus strains which lower the pH of M17 broth containing 2% galactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C.
  • Galactose-fermenting strains may be obtained by the method described in WO 2011/026863.
  • the mutation inactivates the glucokinase protein refers to a mutation which results in an "inactivated glucokinase protein", a glucokinase protein which, if present in a cell, is not able to exert its normal function as well as mutations which prevent the formation of the glucokinase protein or result in degradation of the glucokinase protein,
  • an inactivated glucokinase protein is a protein which compared to a functional glucokinase protein is not able to facilitate phosphorylation of glucose to glucose-6-phosphate or facilitates phosphorylation of glucose to glucose-6- phosphate at a significantly reduced rate.
  • the gene encoding such an inactivated glucokinase protein compared to the gene encoding a functional glucokinase pro- tein comprises a mutation in the open reading frame (ORF) of the gene, wherein said mutation may include, but is not limited to, a deletion, a frameshift mutation, introduction of a stop codon or a mutation which results in an amino acid substitution, which changes the functional properties of the protein, or a promoter mutation that reduces or abolishes transcription or translation of the gene.
  • ORF open reading frame
  • the mutation reduces the activity (the rate of phosphorylation of glucose to glucose-6-phosphate) of the glucokinase protein with at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%.
  • the glucokinase activity can be determined by the glucokinase enzymatic assays as described by Pool et al. (2006, Metabolic Engineering 8;456-464).
  • glucokinase protein refers to a glucokinase protein which, if present in a cell, facilitates phosphorylation of glucose to glu- cose-6-phosphate.
  • a functional glucokinase protein may be encoded by a gene comprising an ORF which has a sequence corresponding to position 1- 966 in SEQ ID NO. 1 or a sequence which has at least 85% identity, such as at least 90% identity, such as at least 95% identity, such as at least 98% identity, such as at least 99% identity, to the sequence corresponding to position 1-966 of SEQ ID NO. 1.
  • the percent identity of two sequences can be determined by using mathematical algorithms, such as the algorithm of Karlin and Altschul (1990. Proc. Natl. Acad. Sci. USA 87;2264), the modified algorithm described in Karlin and Altschul (1993. Proc. Natl. Acad. Sci. USA 90; 5873-5877); the algorithm of Myers and Miller ( 1988. CABIOS 4; 11-17) ; the algorithm of Need!eman and Wunsch (1970. J. Mol. Biol. 48;443-453); and algorithm of Pearson and Lipman (1988. Proc. Natl. Acad. Sci. USA 85; 2444-2448).
  • Computer software for the determination of nucleic acid or amino acid sequence identity based on these mathematical algorithms is also available.
  • the default parameters can be used.
  • GMOs genetically modified organisms
  • the present invention instead provides for a method of obtaining naturally occurring or induced mutant strains which can provide a desirable accumulation of glucose in the fermented milk product.
  • the mutant strain is a naturally occurring mutant or an induced mutant.
  • a “mutant bacterium” or a “mutant strain” as used herein refers to a natural (spontaneous, naturally occurring) mutant bacterium or an induced mutant bacte- rium comprising one or more mutations in its genome (DNA) which are absent in the wild type DNA.
  • An "induced mutant” is a bacterium where the mutation was induced by human treatment, such as treatment with chemical mutagens, UV- or gamma radiation etc.
  • a “spontaneous mutant” or “naturally occurring mutant” has not been mutagenized by man.
  • Mutant bacteria are herein, non-GMO (non-genetically modified organism), i.e. not modified by recombinant DNA technology.
  • Wild type strain refers to the non-mutated form of a bacterium, as found in nature.
  • the mutant strain of Streptococcus thermophilus increases the amount of glucose in 9.5% B-milk to at least 5 mg/mL when inoculated into the 9,5% B-milk at a concentration of 10 6 - 10 7 CFU/ml and grown at 40°C for at least 20 hours.
  • the mutant strain of Streptococcus thermophilus increases the amount of glucose in 9.5% B-milk with 0,05% sucrose to at least 5 mg/mL when inoculated into the 9.5% B-milk with 0,05% sucrose at a concentration of 10 6 -10 7 CFU/ml and grown at 40°C for at least 20 hours.
  • 9,5% B-milk is boiled milk made with reconstituted low fat skim milk powder to a level of dry matter of 9.5% and pasteurized at 99°C for 30 min. followed by cooling to 40°C.
  • the mutant strain leads to an increase in the amount of glucose to at least 6 mg/mL, such as at least 7 mg/mL, such as at least 8 mg/mL, such as at least 9 mg/ml, such as at least 10 mg/ml, such as at least 11 mg/ml, such as at least 12 mg/ml, such as at least 13 mg/ml, such as at least 14 mg/ml, such as at least 15 mg/ml, such as at least 20 mg/ml, such as at least 25 mg/ml.
  • at least 6 mg/mL such as at least 7 mg/mL, such as at least 8 mg/mL, such as at least 9 mg/ml, such as at least 10 mg/ml, such as at least 11 mg/ml, such as at least 12 mg/ml, such as at least 13 mg/ml, such as at least 14 mg/ml, such as at least 15 mg/ml, such as at least 20 mg/ml, such as at least 25 mg/ml.
  • mutant strain of Streptococcus thermophilus is resistant to 2-deoxyglucose.
  • resistant to 2-deoxyglucose herein is defined by that a particular mutated bacterial strain has the ability to grow to a colony when streaked on a plate of M17 medium containing 20 mM 2-deoxyglucose after incubation at 40°C for 20 hours.
  • the presence of 2-deoxygluxcose in the culture medium will prevent the growth of non-mutated strains while the growth of the mutated strains is not affected or not affected significantly.
  • Non-mutated strains which can be used as sensitive reference strains in the assessment of resistance preferably include the strains CHCC14994 and CHCC11976.
  • Examples 1 and 2 herein exemplify the isolation of mutant strains of Streptococcus thermophilus which are resistant to 2-deoxyglucose.
  • the mutant strain according to the invention can be characterized by its growth pattern. This is illustrated by the finding that the growth rate of the mutant strain is higher in Ml? medium +2% galactose than in M17 medium+2% glucose. The growth rate is measured as the development in optical density of the exponentially growing culture at 600 nanometers (OD 600 ) with time as described in Example 2 herein.
  • the growth rate is at least 5% higher, such as at least 10% higher, such as at least 15% higher, such as at least 20% higher, in M 17 medium+2% galactose than in M 17 medium+2% glucose.
  • the mutation results in the replacement of the codon coding for serine with the codon coding for proline in position 72 in SEQ ID NO. 2.
  • the mutation in the glcK gene results in the replacement of a T with a C on position 214 in SEQ ID NO. 1.
  • the mutation results in the replacement of the codon coding for threonine with the codon coding for isoleucine in position 141 in SEQ ID NO. 2.
  • the mutation in the glcK gene results in the replacement of a C with a T on position 422 in SEQ ID NO. 1.
  • glcK gene of a Streptococcus thermophilus may be inactivated by other types of mutations in other sites of the glcK gene.
  • the Streptococcus thermophilus strain carries a mutation that reduces the transport of glucose into the cell.
  • the term "a mutation that reduces the transport of glucose into the cell” as used herein refers to a mutation in a gene encoding a protein involved in transport of glucose which results in an accumulation of glucose in the environment of the cell.
  • the level of glucose in the culture medium of a Streptococcus thermophilus strain can readily be measured by methods known to the skilled person and as described in Example 4 herein also when the culture medium is a milk substrate.
  • the mutation reduces the transport of glucose into the cell with at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%,
  • the transport of glucose into the cell can be determined by the glucose uptake assay as described by Cochu et al. (2003. Appl Environ Microbiol 69(9); 5423- 5432).
  • the Streptococcus thermophilus strain carries a mutation in a gene en- coding a component of a glucose transporter, wherein the mutation inactivates the glucose transporter protein or has a negative effect on expression of the gene.
  • the component may be any component of a glucose transporter protein which is critical for the transport of glucose. E.g., it is contemplated that inactivation of any component of the glucose/mannose PTS in Streptococcus thermophilus depicted in Figure 3 will result in inactivation of the glucose transporter function.
  • the mutation inactivates the glucose transporter refers to a mutation which results in an "inactivated glucose transporter", a glucose transporter protein which, if present in a cell, is not able to exert its normal function as well as mutations which prevent the formation of the glucose transporter protein or result in degradation of the glucose transporter protein.
  • an inactivated glucose transporter protein is a protein which com- pared to a functional glucose transporter protein is not able to facilitate transport of glucose over a plasma membrane or facilitates transport of glucose over a plasma membrane at a significantly reduced rate.
  • the gene encoding such an inactivated glucose transporter protein compared to the gene encoding a functional glucose transporter protein comprises a mutation in the open reading frame (ORF) of the gene, wherein said mutation may include, but is not limited to, a deletion, a frameshift mutation, introduction of a stop codon or a mutation which results in an amino acid substitution, which changes the functional properties of the protein, or a promoter mutation that reduces or abolishes transcription or translation of the gene.
  • the mutation reduces the activity (the rate of transport of glucose) of the glucose transporter protein by at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%.
  • the glucose transporter activity can be determined by the glucose uptake assay as described by Cochu et al. (2003. Appl Environ Microbiol 69(9); 5423-5432).
  • the term "functional glucose transporter protein” as used herein refers to a glucose transporter protein which, if present in a cell, facilitates transport of glucose over a plasma membrane.
  • Streptococcus thermophilus strain carries a mutation in the DNA sequence of the manM gene encoding the IIC Man protein of the glucose/man nose phosphotransferase system, wherein the mutation inactivates the IIC Man protein or has a negative effect on expression of the gene.
  • the mutation results in the replacement of the codon coding for glutamic acid with a stop codon in position 209 of SEQ ID NO. 6 of the IIC Man protein of the glucose/mannose phosphotransferase system.
  • the mutation results in the replacement of a G with a T in position 625 of SEQ ID NO. 5.
  • a second aspect of the invention relates to a Streptococcus thermophilus strain selected from the group consisting of the Streptococcus thermophilus CHCC15757 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25850, a Streptococcus thermophilus CHCC15887 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25851, the Streptococcus thermophilus CHCC16404 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26722 and strains derived therefrom.
  • strains derived therefrom should be understood as strains derived, or strains which can be derived from a strain (or their mother strain) of the invention by means of e.g. genetic engineering, radiation and/or chemical treatment.
  • the "strains derived therefrom” can also be spontaneously occurring mutants. It is preferred that the "strains derived therefrom” are func- tionally equivalent mutants, e.g. mutants that have substantially the same, or improved, properties (e.g. regarding excretion of glucose) as their mother strain.
  • Such "strains derived therefrom” are part of the present invention.
  • strains derived therefrom refers to strains obtained by subjecting a strain of the invention to any conventionally used mutagenization treatment including treatment with a chemical mutagen such as ethane methane sulphonate (EMS) or N-methyl-N'-nitro-N-nitroguanidine (NTG), UV light, or to a spontaneously occurring mutant.
  • a mutant may have been subjected to several mutagenization treatments (a single treatment should be understood as one mutagenization step followed by a screening/selection step), but it is presently preferred that no more than 20, or no more than 10, or no more than 5, treatments (or screening/selection steps) are carried out.
  • the Streptococcus thermophilus strain is selected from the group consisting of the Streptococcus thermophilus CHCC15757 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25850, a Streptococcus thermophilus
  • Lactobacillus delbrueckii subsp. bulgaricus is a lactic acid bacterium which is frequently employed for commercial milk fermentation where the organism is normally used as part of a mixed starter culture.
  • Lactose is fermented more readily than the monosaccharides glucose, fructose, and mannose by Lactobacillus delbrueckii subsp. bulgaricus and strains of this species normally do not grow on galactose (Buchanan R.E., Gibbons N.E., eds (1974) : Bergey's manual of determinative bacteriology (The Williams & Wilkins Co. Baltimore, Md), 8th ed,). During fermentation of lactose by Lactobacillus del- brueckii subsp. bulgaricus, only the glucose portion of the lactose molecule is fermented and thus galactose accumulates in fermented milk products.
  • Lactobacillus delbrueckii subsp bulgaricus strains which are unable to grow on glucose as carbon source
  • the present inventors have exposed strains of Lactobacillus delbrueckii subsp, bulgaricus to 2-deoxyglucose.
  • the isolated mutants were resistant to 2-deoxyglucose and capable of growing in a milk substrate without using glucose as a carbon source.
  • the mutants were found to increase the glucose content of milk. Accordingly, fermented milk products produced by use of these strains are characterized by a higher amount of glucose which renders the products sweeter in taste.
  • Lactobacillus delbrueckii subsp, bulgaricus strains of the inven- tion alone are still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. Additionally, as demonstrated in the Examples, it was found that the strains excreted approximately 5 mg/ml or more glucose while less than approximately 10 mg/ml lactose remained in the fermented milk when 9.5% B-milk was inoculated with 10 6 -10 7 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Lactobacillus delbrueckii subsp.
  • the use of such strains for producing fermented milk prod ⁇ ucts may have an importance for people with lactose intolerance. Consequently, the final fermented milk has a higher inner sweetness index of approximately 2 or higher calculated as described by Godshall (1988. Food Technol ⁇ ogy 42(ll) :71-78), such as 2.5 or higher or such as 3 or higher.
  • the third aspect of the present invention relates to a Lactobacillus delbrueckii subsp. bulgaricus strain, wherein said strain is resistant to 2-deoxyglucose.
  • resistant to 2-deoxyglucose in relation to a Lactobacillus delbrueckii subsp. bulgaricus strain is defined by that a particular bacterial strain has the ability to grow to a colony after incubation at 40°C for 20 hours when streaked on a plate of MRS-IM medium containing 2% lactose and 20 mM 2-deoxyglucose.
  • the presence of 2-deoxyglucose in the culture medium will prevent the growth of non- resistant strains while the growth of resistant strains is not affected or not affect- ed significantly, Non-resistant Lactobacillus delbrueckii subsp.
  • bulgaricus strains which can be used as sensitive reference strains in the assessment of resistance include the Lactobacillus delbrueckii subsp. bulgaricus strains CHCC759, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under the accession no. DSM 26419 and CHCC10019, that was deposited
  • the MRS-IM agar plates containing 2% lactose and furthermore con- taining 20 mM 2-deoxyglucose plate is overgrown with colonies, it is appropriate to increase the concentration of 2-deoxyglucose in the plates, for example to 30 mM or even 40 mM or higher. In the event no colonies are obtained, it is appropriate to decrease the concentration of 2-deoxyglucose in the plates, for example to 15 mM or 10 mM or even lower. If considered necessary, the mutation rate can be enhanced by using appropriate physical or chemical mutagenesis protocols.
  • the Lactobacillus delbrueckii subsp. bulgaricus strain of the invention increases the amount of glucose in 9.5% B-milk to at least 5 mg/ml when inoculated into the 9.5% B-milk at a concentration of 10 6 to 10 7 CFU/ml and grown at 40°C for at least 20 hours, such as for between 20 to 30 hours, such as for 20 hours.
  • the mutant strain leads to an increase in the amount of glucose to at least 6 mg/ml, such as at least 7 mg/ml, such as at least 8 mg/mL, such as at least 9 mg/ml, such as at least 10 mg/ml, such as at least 11 mg/ml, such as at least 12 mg/ml, such as at least 13 mg/ml, such as at least 14 mg/ml, such as at least 15 mg/ml.
  • a fourth aspect of the invention relates to a Lactobacillus delbrueckii subsp. bul- garicus strain which is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26420, the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26421, and strains derived therefrom.
  • the Lactobacillus delbrueckii subsp, bul- garicus strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159, that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26420, the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160, that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession no.
  • DSM26421 and a mutant strain derived therefrom, wherein the mutant strain is obtained by using one of the deposited strains as starting material, and wherein the mutant has retained or further improved the lactose fermenting property and/or the glucose secreting property of said deposited strain.
  • a fifth aspect of the present invention relates to a composition
  • a composition comprising from 10 4 to 10 12 CFU (colony forming units)/g of a Streptococcus thermophilus strain according to the first or second aspect of the invention, such as from 10 s to 10 11 CFU/g, such as from 10 6 to 10 10 CFU/g, or such as from 10 7 to 109 CFU/g of the Streptococcus thermophilus strain.
  • the Streptococcus thermophilus strain is unable to acidify 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% B-milk is inoculated with 10 6 -10 7 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C, and the composition further comprises an amount of a compound, which can trigger acidification of the 9.5% B-milk by the Streptococcus thermophilus strain CHCC16404 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM
  • 26722 defined as resulting in a pH decrease of 1.0 or more when 9.5% B-milk is inoculated with 10 6 -10 7 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40° C.
  • the compound is sucrose.
  • the amount of sucrose is from 0.000001% to 2%, such as from 0.00001% to 0.2%, such as from 0.0001% to 0.1%, such as from 0.001% to 0.05%.
  • the composition further comprises from 10 4 to 10 12 CFU/g of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention, such as from 10 5 to 10 11 CFU/g, such as from 10 6 to 10 10 CFU/g, or such as from 10 7 to 10 9 CFU/g of the LactobaciHus delbrueckii subsp. bulgaricus strain.
  • a preferred composition of the present invention comprises, for example, Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160 in combination with Streptococcus thermophilus strain CHCC15757.
  • a further preferred composition comprises Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 in combination with Streptococcus thermophilus strain CHCC15887.
  • An even further preferred composition comprises Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 in combination with Streptococcus thermophilus strain CHCC16404.
  • Lactobacillus delbrueckii subsp. bulgaricus, Streptococcus thermophilus and other lactic acid bacteria are commonly used as starter cultures serving a technological purpose in the production of various foods, such as in the dairy industry, such as for fermented milk products, Thus, in another preferred embodiment the composi- tion is suitable as a starter culture.
  • Starter cultures may be provided as frozen or dried starter cultures in addition to liquid starter cultures.
  • the composition is in frozen, freeze-dried or liquid form.
  • a starter culture composition according to the present invention may comprise one or more cryoprotective agent(s) selected from the group consisting of inosine- 5'- monophosphate (IMP), adenosine -5'- monophosphate (AMP), guanosine-5'-monophosphate (GMP), uranosine-5'- monophosphate (UMP), cytidine-5'-monophosphate (CMP), adenine, guanine, uracil, cytosine, adenosine, guanosine, uridine, cytidine, hypoxanthine, xanthine, hy- poxanthine, orotidine, thymidine, inosine and a derivative of any such compounds.
  • cryoprotective agent(s) selected from the group consisting of inosine- 5'- monophosphate (IMP), adenosine -5'- monophosphate (AMP), guanosine-5'-monophosphate (
  • a sixth aspect of the invention is directed to a method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to the first or second aspect of the present invention.
  • milk is to be understood as the lacteal secretion obtained by milking any mammal, such as a cow, a sheep, a goat, a buffalo or a camel. In a preferred embodiment, the milk is cow's milk.
  • milk substrate may be any raw and/or processed milk material that can be subjected to fermentation according to the method of the invention.
  • useful milk substrates include, but are not limited to, solutions/suspensions of any milk or milk like products comprising protein, such as whole or low fat milk, skim milk, buttermilk, reconstituted milk powder, condensed milk, dried milk, whey, whey permeate, lactose, mother liquid from crystallization of lactose, whey protein concentrate, or cream.
  • the milk substrate may originate from any mammal, e.g. being substantially pure mammalian milk, or reconstituted milk powder.
  • At least part of the protein in the milk substrate is proteins naturally occurring in milk, such as casein or whey protein.
  • part of the protein may be proteins which are not naturally occurring in milk.
  • the milk substrate Prior to fermentation, the milk substrate may be homogenized and pasteurized according to methods known in the art. "Homogenizing” as used herein means intensive mixing to obtain a soluble suspension or emulsion. If homogenization is performed prior to fermentation, it may be performed so as to break up the milk fat into smaller sizes so that it no longer separates from the milk. This may be accomplished by forcing the milk at high pressure through small orifices.
  • “Pasteurizing” as used herein means treatment of the milk substrate to reduce or eliminate the presence of live organisms, such as microorganisms.
  • pasteurization is attained by maintaining a specified temperature for a specified period of time. The specified temperature is usually attained by heating. The tem- perature and duration may be selected in order to kill or inactivate certain bacteria, such as harmful bacteria. A rapid cooling step may follow.
  • “Fermentation” in the methods of the present invention means the conversion of carbohydrates into alcohols or acids through the action of a microorganism.
  • fermentation in the methods of the invention comprises conversion of lactose to lactic acid.
  • Fermentation processes to be used in production of fermented milk products are well known and the person of skill in the art will know how to select suitable process conditions, such as temperature, oxygen, amount and characteristics of mi- croorganism(s) and process time. Obviously, fermentation conditions are selected so as to support the achievement of the present invention, i.e. to obtain a dairy product in solid or liquid form (fermented milk product).
  • fertilizer product refers to a food or feed product wherein the preparation of the food or feed product involves fermentation of a milk substrate with a lactic acid bacteria.
  • Fermented milk product includes but is not limited to products such as yoghurt, cheese, sour cream and buttermilk as well as fermented whey.
  • the concentration of Streptococcus thermophilus cells inoculated is from 10 4 to 10 9 CFU Streptococcus thermophilus cells per ml of milk substrate, such as from 10 4 CFU to 10 8 CFU Streptococcus thermophilus cells per ml of milk substrate.
  • the Streptococcus thermophilus strain is unable to acidify the 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% B-milk is inoculated with 10 6 -10 7 CFU/ ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C, and the milk substrate is added an amount of a compound, effective to trigger acidification of 9.5% B-milk by the Streptococcus thermophilus strain CHCC16404 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No.
  • DSM 26722 defined as resulting in a pH decrease of 1.0 or more when 9.5% B- milk is inoculated with 10 5 -10 7 CFU/ml of the Streptococus thermophilus strain and incubated for 14 hours at 40°C.
  • the compound is sucrose.
  • the amount of sucrose is from 0,000001% to 2%, such as from 0.00001% to 0.2%, such as from 0.0001% to 0.1%, such as from 0.001% to 0.05%.
  • a seventh aspect of the invention is directed to a method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Lactobacillus delbrueckii subsp.
  • the concentration of Lactobacillus delbrueckii subsp, bulgaricus cells inoculated is from 10 4 to 10 9 CFU Lactobacillus delbrueckii subsp. bulgaricus cells per ml of milk substrate, such as from 10 4 CFU to 10 s CFU Lactobacillus delbrueckii subsp. bulgaricus cells per ml of milk substrate,
  • the method for producing the fermented milk product comprises inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to the present invention and at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the present invention.
  • the fermented milk product is a yoghurt or a cheese.
  • Examples of cheeses which are prepared by fermentation with Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus include Mozzarella and pizza cheese (Hoier et al. (2010) in The Technology of Cheese ma king, 2 nd Ed. Blackwll Publishing, Oxford; 166-192).
  • the fermented milk product is a yoghurt.
  • a yoghurt starter culture is a bacterial culture which com ⁇ prises at least one Lactobacillus delbrueckii subsp bulgaricus strain and at least one Streptococcus thermophilus strain.
  • the term "yoghurt” refers to a fermented milk product obtainable by inoculating and ferment- ing milk with a composition comprising a Lactobacillus delbrueckii subsp bulgaricus strain and a Streptococcus thermophilus strain.
  • the present invention relates to a fermented milk product obtainable by the method according the sixth or seventh aspect of the invention,
  • the present invention relates to a fermented milk product com- prising at least one Streptococcus thermophilus strain according to the first or second aspect of the invention.
  • the present invention relates to a fermented milk, product comprising at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention.
  • the fermented milk product comprises at least one Streptococcus thermophilus strain according to the invention and at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention,
  • the fermented milk product is a yoghurt or a cheese.
  • the fermented milk product is a yoghurt.
  • the present invention relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention for the preparation of a fermented milk product.
  • the present invention relates to the use of a Lactobacillus delbrueckii subsp. bulgaricus according to the third or fourth aspect of the invention for the preparation of a fermented milk product,
  • a thirteenth aspect of the present invention relates to the use of a Streptococcus thermophilus strain according to the invention and a Lactobacillus delbrueckii subsp. bulgaricus according to the invention for the preparation of a fermented milk product.
  • a fourteenth aspect relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the Invention for increasing the sweetness of a fermented milk product
  • the present invention is directed to the use of a Lactobacillus delbrueckii subsp. buigaricus strain according to the third and fourth aspect of the invention for increasing the sweetness of a fermented milk product.
  • the present invention is directed to the use of a Streptococcus thermopMius strain according to the first or second aspect of the invention and a Lactobacillus delbrueckii subsp. buigaricus strain according to the third and fourth aspect of the invention for increasing the sweetness of a fermented milk product.
  • Streptococcus thermophilus strain of the invention and the Lactobacillus delbrueckii subsp. buigaricus strain of the invention may be particularly useful in increasing the sweetness of a fermented milk product intended for children.
  • a seventeenth aspect of the present invention relates to a fermented milk product according to the invention for use in reducing the calorie intake.
  • the fermented milk product according to the invention is thought to be especially useful in the diet of persons suffering from overweight or obesity.
  • the fermented milk product according to the invention is for use in reducing the calorie intake of a person suffering from over- weight or obesity.
  • Overweight and obesity are medical conditions defined by the World Health Organization (WHO) as abnormal or excessive fat accumulation that presents a risk to health.
  • the Body Mass Index (BM1) can be used as a rough guide to classify overweight and obesity in adults and is calculated as a person's weight in kilograms divided by the square of his/her height in meters (kg/m 2 ).
  • the WHO definition states that a BMI greater than or equal to 25 is overweight and that a BMI greater than or equal to 30 is obesity.
  • An eighteenth aspect of the present invention relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention for decreasing the lactose content in a fermented milk product.
  • the present invention is directed to the use of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention for decreasing the lactose content in a fermented milk product.
  • a twentieth aspect of the present invention is related to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention and a Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention for decreasing the lactose content in a fermented milk product.
  • a twenty-first aspect of the present invention is directed to a fermented milk product according to the invention for use in avoiding symptoms of lactose intolerance.
  • a twenty-second aspect relates to a composition of the invention for use as a medicament.
  • the invention is directed to the use of a Streptococcus thermophilus strain according to the invention for improving the growth of a Bifidobacterium stra i n .
  • the Bifidobacterium strain belongs to a species selected from the group consisting of Bifidobacterium longum, Bifidobacterium bifidum, Bifidobacterium Iactis, Bifidobacterium brevis, Bifidobacterium animalis, Bifidobac- terium adolescentis and Bifidobacterium infantis, such as a strain selected from the group consisting of Bifidobacterium animalis subsp. Iactis BB-12® strain deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession No.
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • DSM 15954 Bifidobacterium animalis strain deposited at DSMZ under accession No, DSM 15954, Bifidobacterium longum subsp. infantis strain deposited at DSMZ under accession No. DSM 15953 and Bifidobacterium longum subsp. longum strain deposited at DSMZ under accession No. DSM 15955.
  • Most preferred the Bifidobacterium strain is Bifidobacterium animalis subsp. Iactis B8-12® deposited at DSMZ under accession No. DSM 15954.
  • the invention relates to the use of a Lactobacillus delbrueckii subsp.
  • the Bifidobacterium strain belongs to a species selected from the group consisting of Bifidobacterium longum, Bifidobacterium bifidum, Bifidobacterium I act is, Bifidobacterium brevis, Bifidobacterium animalis, Bifidobacterium adolescentis and Bifidobacterium infantis, such as a strain selected from the group consisting of Bifidobacterium animalis subsp. lactis BB-12® strain deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession No.
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • DSM 15954 Bifidobacterium animalis strain deposited at DSMZ under accession No, DSM 15954, Bifidobacterium longum subsp. infantis strain deposited at DSMZ under accession No. DSM 15953 and Bifidobacterium longum subsp. longum strain deposited at DSMZ under accession No. DSM 15955.
  • Most preferred the Bifidobacterium strain is Bifidobacterium animalis subsp. lactis BB-12® deposited at DSMZ under accession No. DSM 15954.
  • a twenty-fifth aspect relates to the use of a a Streptococcus thermophiius strain according to the invention and a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention for for improving the growth of Bifidobacterium animalis subsp. lactis strain BB-12® that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 15954. 2-deoxyglucose and a determination of the growth pattern of the bacteria in M17 medium+2% galactose compared to in M17 medium +2% glucose is used for the selection of bacteria having a mutation in the glucokinase (glcK) gene.
  • glcK glucokinase
  • a method for screening and iso- lating a strain of Streptococcus thermophiius with a mutated glcK gene comprises the following steps:
  • resistant to 2-deoxyglucose herein is defined by that a particular mutated bacterial strain has the ability to grow to a colony when streaked on a plate of M17 medium containing 2% lactose or 2% galactose and containing 20 mM 2- deoxyglucose after incubation at 40°C for 20 hours.
  • the presence of 2- deoxygluxcose in the culture medium will prevent the growth of non-mutated strains while the growth of the mutated strains is not affected or not affected sig- niflcantly.
  • Non-mutated strains which can be used as sensitive reference strains in the assessment of resistance include the strains CHCC14994 and CHCC11976.
  • Examples 1 and 2 herein exemplify the isolation of mutant strains of Streptococcus thermophilus which are resistant to 2-deoxyglucose.
  • the method further comprises the step al) subjecting the mother strain to mutagenization, such as subjecting the mother strain to a chemical and/or a physical mutagen.
  • the method further comprises a step d) selecting and isolating from a pool of 2-deoxyglucose resistant Streptococcus thermophilus strains derived from the Streptococcus thermophilus strain selected in step c) a Streptococcus thermophilus strain if the growth rate of the Streptococcus thermophilus strain is high in M17 medium+2% sucrose but zero or at least 0-50% reduced compared to the growth rate of the mother strain in M17 medium+2% glucose.
  • the galactose-fermenting Streptococcus thermophilus mother strains are capable of growth on/in M17 medium+2% galactose and are defined herein by that they have the ability to lower the pH in M17 broth containing 2% galactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C.
  • Such galactose-positive strains have been described in the prior art and WO2011/026863 (Chr. Hansen A/S) describes a method for obtaining such strains.
  • the mother strain is selected from the group consisting of the Streptococcus thermophilus CHCC14994 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25838, the Streptococcus thermophilus CHCC11976 strain that was de- posited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 22934, and strains derived therefrom.
  • strains derived therefrom should be understood as strains derived, or strains which can be derived from galactose-fermenting Streptococcus thermophilus mother strains by means of e.g. genetic engineering, radiation and/or chemical treatment.
  • strains derived therefrom can also be spontaneously occurring mutants. It is preferred that the "strains derived therefrom” are functionally equivalent mutants, e.g. mutants that have substantially the same, or improved, properties (e.g. regarding fermentation of galactose) as their mother strain. Such “strains derived therefrom” are part of the present invention.
  • strains derived therefrom refers to strains obtained by subjecting a strain of the invention to any conventionally used mutagenization treatment including treatment with a chemical mutagen such as ethane methane sulphonate (EMS) or N-methyl-N'-nitro-N-nitroguanidine (NTG), UV light, or to a spontaneously occurring mutant
  • a mutant may have been subjected to several mutagenization treatments (a single treatment should be understood one muta- genization step followed by a screening/selection step), but it is presently preferred that no more than 20, or no more than 10, or no more than 5, treatments (or screening/selection steps) are carried out, In a presently preferred mutant less than 1%, less than 0.1%, less than 0.01%, less than 0.001% or even less than 0.0001% of the nucleotides in the bacterial genome have been replaced with an- other nucleotide, or deleted, compared to the mother strain.
  • a chemical mutagen such as ethane methane sulphon
  • a mutant Streptococcus thermophilus strain obtainable by the method according to the twentyseventh aspect is comprised herein.
  • a method for screening and isolating a strain of Lactobacillus delbrueckii subsp, bulgaricus with an impaired glucose metabolism is provided. The method comprises the following steps:
  • bulgaricus strain is higher in MRS-IM medium+2% lactose than in MRS-IM medi- um+2% glucose.
  • the isolation of mutant strains of Lactobacillus delbrueckii subsp. bulgaricus strains which are resistant to 2-deoxyglucose is described in detail in the Examples.
  • the skilled person can routinely test for a specific strain of interest (e.g. one from a relevant commercial product) if this specific strain of interest has the herein relevant resistance to 2-deoxyglucose.
  • the skilled person can routinely test for a specific strain of interest (e.g. one from a relevant commercial product) if this specific strain of interest has the relevant growth pattern which is a property of the se- lected mutants.
  • the method further comprises the step al) subjecting the mother strain to mutagenization, such as subjecting the mother strain to a chemical and/or a physical mutagen.
  • Lactobacillus delbrueckii subsp. bulgaricus mother strains are capable of growing on/in MRS-IM medium +2% lactose and are defined herein by that they have the ability to lower the pH in MRS-IM broth containing 2% lactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C.
  • the mother strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus CHCC759 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen un- der accession No. DSM 26419, the Lactobacillus delbrueckii subsp. bulgaricus
  • a Lactobacillus delbrueckii subsp. bulgaricus strain ob ⁇ tainable by the method according to the twenty-eighth aspect is comprised here ⁇ in.
  • the medium used is the M17 medium known to persons skilled in the art.
  • the M17 agar medium has the following composition per litre H 2 0: agar, 12.75 g
  • soyapeptone (papainic), 5 g
  • yeast extract 2.5 g
  • yeast extract 2.5 g
  • Carbon sources added are sterile lactose 20 g/l, glucose 20 g/l or galactose 20 g/l.
  • the M 17 medium is a medium that is considered to be suitable for growth of Streptococcus thermophilus. Further, as understood by the skilled person, in the present context, a M17 concentrate may be supplied from different suppliers and independently of the specific supplier one will (within standard measurement uncertainty) get the same herein relevant result of 2- deoxyglucose resistance for a herein relevant cell of interest.
  • MRS-IM medium The medium used for culturing Lactobacillus delbrueckii subsp. bulgaricus was MRS-IM medium. MRS-IM was used either in the form of agar plates or broth.
  • the MRS-IM agar medium had the following composition per litre H 2 0;
  • the pH was adjusted after autoclaving to 6.9 ⁇ 0.1 at 25°C.
  • the MRS-IM broth used in the below examples for liquid cultures had the following composition per litre H 2 0 :
  • MRS-IM media can be varied to some extent without affecting the capability of the media to support growth of Lactobacillus delbrueckii subsp, bulgari- cus. Further, as will be understood by the skilled person, a MRS-IM concentrate or the various components described above may be obtained from different suppliers and used for the preparation of a MRS-IM medium. These media will likewise be used in the below examples, in particular in the 2-deoxyglucose resistance selection assay.
  • Streptococcus thermophilus CHCC11976 (galactose-fermenting strain with a mutation in the GalK gene and producing exopolysaccharides as described in WO 2011/026863).
  • Streptococcus thermophilus CHCC14994 galactose-fermenting strain
  • Streptococcus thermophilus CHCC16404 (hyper- lactose fermenting and glucose secreting mutant of CHCC15757).
  • Lactobacillus delbrueckii subsp. bulgaricus CHCC16159 (2-deoxyglucose resistant mutant of CHCC759).
  • Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 (2-deoxyglucose resistant mutant of CHCC10019).
  • EXAMPLE 1 Use of 2-deoxyglucose to isolate glucose kinase mutants of Streptococcus thermophilus with enhanced excretion of glucose.
  • Growth in exponential phase is herein measured as the development in optical density of the exponentially growing culture at 600 nanometers (OD 6 oo) with time at 40°C.
  • optical density (OD) of the culture is measured in a spectrophotometer.
  • the specific strain of interest is grown in the liquid broth (M17) to which is added 2% lactose at 40°C over night.
  • M17 liquid broth
  • lactose 2% lactose
  • GK1F 5' CTT GGG TAA AAG GCT CTA TG 3' (SEQ ID NO. 3)
  • GK1R 5' CGT TTT TCA ACA AAA AAG TGC TACC 3 * (SEQ ID NO. 4)
  • the conditions for the PGR reactions were as specified by the manufacturer of the PGR amplification kit (ROCHE) e.g.
  • PGR amplification generates a 1168 bp fragment.
  • the PGR fragment was submitted for DNA sequencing at Macrogen using the same two primers that were used for the amplification. After sequencing, the DNA sequence was compared to that of the mother strain.
  • EXAMPLE 4 Carbohydrate analysis of fermented milk.
  • B-milk was inoculated with 1% (10 6 -10 7 CFU/ml) of a culture grown over night in M 17 broth to which is added 2% galactose.
  • the acidification was followed with an INTAB PC logger and Easyview software. After 30 hours of acidification at 40°C milk samples were taken for HPLC analysis to obtain the content of relevant sugars and acids. The acidification curves showed that the mutants had a slightly delayed initiation of acidification but ended at a similar end pH.
  • the HPLC data is presented in Table 1.
  • Table 1 HPLC data of milk samples.
  • Sweetness calculated mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galac tose * 32.
  • the mutations in the glcK gene inactivates the the encoded glucokinase protein.
  • the following method is suitable for determining whether or not a strain of interest is resistant to 2-deoxyglucose.
  • Strains of interest are inoculated into 10 ml of the above-described MRS-IM broth containing 2% lactose and incubated anaerobi- cally at 40°C over night
  • diluted samples of these cultures containing about 10 4 -10 5 cells are plated on MRS-IM agar plates containing 2% lactose and furthermore containing the same 2-deoxyglucose concentration that was used for selection of the resistant mutant (typically 20 mM but other concentrations might be used).
  • Lactobacillus delbrueckii subsp bulgaricus strains which are not resistant to 2-deoxyglucose will produce few if any colonies whereas strains which are resistant to 2-deoxyglucose will produce a multitude of colonies.
  • Appropriate controls include the Lactobacillus delbrueckii subsp, bulgaricus strains, CHCC759 and CHCC10019, which are sensitive to 2-deoxyglucose at a concentration of 20 mM and CHCC16159 and CHCC16160 which are resistant to 20 mM 2-deoxyglucose.
  • CHCC16159 (derived from mother strain CHCC759) and CHCC16160 (derived from mother strain CHCC10019). These mutant strains were deposited at the Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH.
  • EXAMPLE 6 Growth pattern of 2-deoxyglucose resistant mutants of Lactobacillus delbrueckii subsp. bulgaricus
  • the growth pattern of the mu ⁇ tants was compared to that of the mother strains by growing both the mother strains, CHCC759 and CHCC10019, and the mutants, CHCC16159 and
  • CHCC16160 in MRS-IM broth containing 2% glucose.
  • EXAMPLE 7 Carbohydrate analysis of milk fermented with strains of Lactobacillus delbrueckii subsp, bulgaricus.
  • the two 2-deoxyglucose resistant mutant strains consumed at least about 94 % of the lactose, while the mother strains consumed at least about 37 % of the lactose.
  • CHCC16160 For the mutant showing the highest production of lactic acid, CHCC16160, as little as 2.9 mg/ml lactose remained in the fermented milk. Fermented milk products with such low levels of lactose could be suitable for consumption by people with lactose intolerance.
  • the two mutant strains CHCC16159 and CHCC16160, excreted between 15.2 and 15.8 mg/ml of glucose while the glucose secretion of the mother strains is below detection level for CHCC10019 and 4.2 mg/ml for CHCC759, respectively.
  • both mutant strains also secreted more galactose than the mother strains. If the reference value for sweetness of sucrose is 100, and the sweetness of lactose is 16, the sweetness of galactose is 32 and the sweetness of glucose is 74, a calculation of the relative sweetness of the final fermented product suggests that the mutant CHCC16160 produces a fermented milk product that is 2.5 times sweeter than with the corresponding mother strain CHCC10019.
  • Table 2 HPLC data of milk samples.
  • EXAMPLE 8 Selection of a hyper-lactose fermenting and glucose secreting mutant of Streptococcus thermophi!us
  • the strain was plated in serial dilutions on M17 agar plates containing 2% galactose and a concentration of 2-deoxyglucose of 30 mM and incubated for 20 hours at 40°C. Resistant colonies were at first re-streaked on the same type of agar plates as they were selected. Survivors were used to inoculate fresh M17 broth containing either 2% lactose, 2% galactose, 2% sucrose or 2% glucose. From this, we were able to isolate a mutant, CHCC16404, derived from
  • CHCC15757 that was unable to grow in B-miik but able to grow in M17 added 2% sucrose at 40 °C. Furthermore, CHCC16404 was unable to grow in M 17 added 2% glucose.
  • mutant CHCC16404 was grown at 40 °C in M17 added 2% sucrose. To our surprise, we observed that mutant strain CHCC16404 was able to acidify 9.5% B-milk only when the strain was inoculated with 1% (10 6 -10 7 CFU/ml) of a culture grown over night in M17 broth added 2% sucrose or when the milk was added sucrose. We observed that addition of as little as 0.01 % sucrose to the milk enabled CHCC16404 to acidify 9.5% B-milk. Furthermore, CHCC16404 was unable to grow in M 17 added 2% glucose at 40°C as opposed to the mother strain CHCC15757 that can grow in M17 added glucose under the same conditions. Together these results indicated that the 2- deoxyglucose treatment of CHCC15757, that generated CHCC16404, has selected a mutation that inactivates the glucose uptake system disabling uptake of secret- ed glucose from the medium
  • EXAMPLE 10 Carbohydrate analysis of milk fermented with hyper-lactose fermenting and glucose secreting Streptococcus thermophilus mutant CHCC16404
  • bottles containing 9.5% B-milk added 0.01%, 0.02%, 0.03% and 0.05% sucrose respectively were inoculated with 1% (10 6 -10 7 CFU/ml) of a culture grown over night in M17 broth to which is added 2% sucrose.
  • the acidification was followed with an INTAB PC logger and Easyview software. After 30 hours of acidification at 40°C, milk samples were taken for HPLC analysis to obtain the content of relevant sugars and acids.
  • Sweetness calculated mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galac ⁇ tose * 32.
  • EXAMPLE 11 Carbohydrate analysis of milk fermented with a combination of strains of Streptococcus thermophilus and strains of Lactobacillus delbrueckii subsp. bulgaricus.
  • the production of yoghurt normally involves the use of a mixed starter culture containing both Lactobacillus delbrueckii subsp, bulgaricus and Streptococcus thermophilus strains.
  • the milk substrate used in the production of yoghurt is inoculated with 1 part Lactobacillus delbrueckii subsp. bulgaricus and 9 parts Streptococcus thermophilus.
  • 9,5% B-milk was inoculated with O. i % of a Lactobacillus delbrueckii subsp.
  • Glucose secretion is even more efficient when a combination of the hyper-lactose fermenting and glucose secreting Streptococcus thermophilus mutant CHCC16404 and the 2-deoxyglucose-resistant mutant strains of Lactobacillus delbrueckii subsp. buigaricus are used, e.g. a combination of CHCC16404 and CHCC16159, or a combination of CHCC164C4 and CHCC16160.
  • This combination provided a yoghurt that is 3.6 times more sweet that the corresponding combination of 2-DG sensitive strains of Streptococcus thermophilus and Lactobacillus delbrueckii subsp. buigaricus, CHCC14994 and CHCC10019 and has no detectable lactose left in the fermented milk.
  • Sweetness calculated mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galactose * 32.
  • EXAMPLE 12 Improving the growth of Bifidobacteria by use of glucose secreting mutants of Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bul- garicus. Some of the most acknowledged probiotic bacteria like Bifidobacterium, animalis subsp. lactis BB-12® (commercially available from Chr. Hansen A/S, Hoersholm,
  • CHCC 5445 (BB-12®) was grown up at anaerobic conditions overnight at 40°C in MRS+0,05% cysteine chloride.
  • CHCC14994 was grown overnight at 40°C in M17 with 2% galactose.
  • CHCC 15757 was grown overnight at 40°C in M17 with 2% galactose.
  • CHCC 5445 (BB-12®) was grown up at anaerobic conditions overnight at 40°C in MRS+0,05% cysteine chloride.
  • CHCC10019 was grown overnight anaerobic at 40°C in MRS with 2% lactose
  • CHCC16159 was grown overnight anaerobic at 40°C in MRS with 2% lactose
  • EXAMPLE 13 Genome comparison of CHCC15757 and CHCC16404 and identification of a mutation in the manM gene encoding the IIC""" protein of the glucose /mannose phosphotransferase system (PTS).
  • PTS glucose /mannose phosphotransferase system
  • Genomic DNA preparations of CHCC15757 and CHCC16404 were sequenced at Beijing Genomics Institute (BGI, Beijing, China) and assembled and finished using CLC genomic workbench software (CLCBio, Arhus, Denmark).
  • the genome sequences of CHCC15757 and CHCC16404 were aligned using the annotated ge- nome sequence of CHRZ1066 as a reference using Mauve 2.3.1 software. After alignment, a single-nucleotide polymorphism (SNP) analysis was performed using the free Mauve 2.3.1 software on both CHCC15757 and CHCC16404.
  • SNP single-nucleotide polymorphism
  • strain Streptococcus thermophilus CHCC15757 has been deposited at
  • strain Streptococcus thermophilus CHCC1.5887 has been deposited at
  • strain Streptococcus thermophilus CHCC 16404 has been deposited at
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • strain Streptococcus thermophilus CHCC14994 has been deposited at
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • strain Streptococcus thermophilus CHCC11976 has been deposited at
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • the strain Lactobacillus delbrueckii subsp. bulgaricus CHCC759 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No. DSM 26419.
  • the strain Lactobacillus delbrueckii subsp, bulgaricus CHCC10019 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ)
  • the strain Lactobacillus delbrueckii subsp. bulgaricus CHCC16159 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr, 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No, DSM 26420.
  • DSMZ Deutsche Sammlung von Mikroorganismen und Zellkulturen
  • the strain Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No. DSM 26421.
  • the strain Bifidobacterium animalis subsp. lactis CHCC5445 (BB-12®) has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 30 September 2003 under the accession No. DSM 15954

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Abstract

The dairy industry today faces a problem of providing an alternative to adding sweeteners to fermented milk products in order to achieve the desired sweet taste without the added calories. Furthermore, it would be highly advantageous to establish a method for reducing lactose in fermented milk products to a level which is acceptable for lactose-intolerant consumers. The above problems have been solved by providing mutant Streptococcus thermophilus strains and mutant Lactobacillus delbrueckii subsp. bulgaricus strains that excrete glucose to the milk when the milk is inoculated and fermented with such Streptococcus thermophilus strains and Lactobacillus delbrueckii subsp, bulgaricus strains. Thus, the present invention relates to strains of Streptococcus thermophilus and Lactobacillus delbrueckii subsp, bulgaricus which secrete glucose to the milk substrate during fermentation, as well as to mixed cultures comprising the Streptococcus thermophilus strains and the Lactobacillus delbrueckii subsp, bulgaricus strains, starter cultures comprising the strains and dairy products manufactured with the cultures. The present method also relates to use of the strains for decreasing the lactose content of a fermented food product and for boosting growth of the probiotic BB-12®.

Description

USE OF LACTIC ACID BACTERIA FOR PREPARING FERMENTED FOOD PRODUCTS WITH INCREASED NATURAL SWEETNESS
FIELD Of INVENTION
The present invention relates to Streptococcus thermophilus bacteria strains and cultures with a sweetening property by excretion of high levels of glucose formed by degradation of lactose, Lactobacillus delbrueckii subsp, bulgaricus bacteria strains with a sweetening property by excretion of high levels of glucose formed by degradation of lactose, starter cultures comprising such strains, and dairy products fermented with the cultures, The present invention also relates to a method of obtaining such strains and the use of such strains for the preparation of fermented milk products and for increasing the sweetness of fermented milk products while decreasing the lactose content of the fermented milk products.
BACKGROUND OF THE INVENTION
Pure fermented milk, products are recognized by a tart or sour taste as a result of the conversion of lactose to lactic acid by lactic acid bacteria during fermentation. They are, therefore, often sweetened by the addition of fruit, honey, sugar or arti- ficial sweeteners to accommodate the customers' desire for a sweeter tasting product.
The food industry has an increasingly high demand for low-calorie sweet-tasting food products in order to help overcome the overweight and obesity problems that have become so prevalent in the last 20 years. Sweetness, usually regarded as a pleasurable sensation, is produced by the presence of sugars and a few other substances. The perception of sugars is very different. Using sucrose as a 100 refer¬ ence, the sweetness of lactose is 16, of galactose 32 and of glucose 74 (Godshall (1988). Food Technology 42(11) : 71-78). Glucose is thus perceived more than 4 times sweeter than lactose while still having approximately the same level of calories.
Sugar in fermented food products is more often being replaced with sweeteners such as aspartame, acesulfame K, sucralose and saccharin which can provide the sweetness with a lower intake of calories. However, the use of artificial sweeteners may result in an off-taste and several studies indicating that the consumption of artificial sweeteners are connected with drawbacks, such as increasing hunger, allergies, cancer etc., have contributed to consumer's preference for fermented milk products which only contain natural sweeteners or, preferably, contain no added sweetener. Thus, a special challenge lies in developing fermented milk products where the natural (inner) sweetness is high.
The acidity of fermented milk products depend in large part on the lactic acid bacteria present and the process parameters used for preparing the fermented milk product.
Fermentation of the disaccharide lactose is very much studied in lactic acid bacteria because it is the major carbon source in milk. In many species, lactose is cleaved by β-galactosidase into glucose and galactose after uptake. The glucose is phosphorylated by glucokinase to glucose-6-phosphate and fermented via the Embden-Meyerhof-Parnas pathway (glycolysis) by most lactic acid bacteria (Figure 1).
Streptococcus thermophHus is one of the most widely used lactic acid bacteria for commercial thermophilic milk fermentation where the organism is normally used as part of a mixed starter culture, the other component being a Lactobacillus sp., e.g. Lactobacillus delbrueckli subsp. bulgaricus for yoghurt or Lactobacillus helvet- icus for Swiss-type cheese. The legal definition of yoghurt in many countries requires Streptococcus thermophHus alongside Lactobacillus delbrueckli subsp. bulgaricus. Both species generate desirable amounts of acetaldehyde, an important flavor component in yo¬ ghurt. Lactose and sucrose are fermented more readily by Streptococcus thermophHus than their component monosaccharides. In the presence of excess galactose only the glucose portion of the lactose molecule is fermented and galactose accumulates in fermented milk products when Streptococcus thermophHus is used. In yo¬ ghurt wherein high acid concentrations limit the fermentation, free galactose re- mains while the free galactose produced in the early stages of Swiss cheese manufacture is later fermented by Lactobacillus helveticus. However, galactose fermenting strains of both Streptococcus thermophilus and Lactobacillus delbrueckii subsp, bulgaricus have been reported by several researchers (Hutkins et al: (1986) J, Dairy Sci, 69(1) ; 1-8; Vaiilancourt et a/. (2002) J. Bacteriol. 184(3); 785-793) and in WO 2011/026863 (Chr. Hansen) is de- scribed a method for obtaining Streptococcus thermophilus strains which are galactose fermenting.
In order to meet the requirements of the food industry, it has become relevant to propose new strains, in particular Streptococcus thermophilus strains and Lacto- bacillus delbrueckii subsp. bulgaricus strains, which provide more natural sweetness without extra calories directly into the fermented product (inner sweetness) by excretion of glucose.
Pool et al. (2006. Metabolic Engineering 8(5); 456-464) discloses Lactococcus lac- tis strain in which the glucose metabolism is completely disrupted by deletion of the genes coding for glucokinase, EII(man/glc) and the newly discovered glucose- PTS Ell(cel). The construction method is genetic recombination for generation of all the mutations and the resulting strain is consequently a genetically modified organism (GMO) that at present can not be used in food products.
Thompson et al, (1985. J Bacteriol. 162(1); 217-223) studied the lactose metabolism in Streptococcus lactis (today renamed Lactococcus lactis). In this work 2- deoxyglucose was used to obtain a mutant in the mannose-PTS system. Subsequently, this mutant was mutagenized using UV mutagenesis followed by screen- ing for glucose-negative colonies by replica plating. In this way a double mutant (mannose PTS and glucokinase) was isolated. This double mutant was used to study the mechanisms involved in the regulation of lactose fermentation by "starter" organisms. These mutants have several disadvantages compared to their parent strain which makes them unsuitable for inclusion in a commercial starter culture. The cell yield of the mutants was half that of the parent strain per mole of lactose fermented and the doubling time was significantly increased in the mutants when grown on lactose. Likewise, the yield of lactic acid was half that of the parent strain per mole of lactose fermented. The behavior of these strains in milk was not analyzed but it is anticipated that the rate of acidification would be signif- icantly reduced. In addition, Lactococcus lactis is generally not chosen for acetaldehyde production and does not contribute to the fulfillment of the requirements for the legal definition of yoghurt. Chervaux et al. (2000. Appi. And Environ. Microbiol,, 66, 5306-5311), studied the physiology of Lactobacillus delbrueckii subsp, bulgaricus strains in a novel chemically defined medium and isolated 2-deoxyglucose- resistant mutants that were deficient in glucose fermentation. Several different phenotypes were observed and strain -specific effects were reported.
None of the above approaches solve the problem of providing Streptococcus ther- mophilus strains and Lactobacillus delbrueckii subsp. bulgaricus strains with enhanced properties for natural sweetening of food products that are fermented using such strains alone or together with other lactic acid bacteria strains.
Additionally, none of the above approaches solve the problem of decreasing the lactose content in food products that are fermented using such strains to a level tolerable to lactose intolerant individuals. SUMMARY OF INVENTION
In contrast to the prior art described above, the present inventors have found that Streptococcus thermophilus strains with a mutation in the glucokinase (glcK) gene can be selected by exposure of galactose-fermenting Streptococcus thermophilus strains to 2-deoxygluxose and that these cells digest lactose and galactose and excrete glucose to the environment when grown on a milk substrate.
Surprisingly, these Streptococcus thermophilus strains alone are stiil fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. They are therefore as such useful in fermented milk applications.
However, glucose is used as a carbon source by many lactic acid bacteria and any excreted glucose can be consumed by other microorganisms present in the fermented milk product. To overcome this problem, the present invention provides 2-deoxyglucose- resistant mutants of Lactobacillus delbrueckii subsp. bulgaricus which have either lost the ability to grow on glucose as carbon source or exhibit an impaired ability to grow under such conditions. The mutant strains of Lactobacillus delbrueckii subsp. buigaricus not only do not consume glucose secreted Into the milk by other microorganisms that might be present, they also excrete high amounts of glucose into the surrounding medium and are, surprisingly, still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. They are therefore as such useful in fermented milk applications.
Such food grade bacteria can be used to fortify fermented milk products with glucose, Glucose has a higher perceived sweetness than both lactose and galactose and as such the excretion of glucose to the milk substrate will result in a higher perceived (inner) sweetness in the fermented milk product.
The inventors of the present invention found that when a milk substrate is fermented with a Streptococcus thermophilus strain and a Lactobacillus delbrueckii subsp. buigaricus strain according to the invention the lactose level within the milk decreases significantly.
Lactose intolerance is a condition caused by the inability to digest lactose. Most lactose-intolerant individuals can tolerate some amount of lactose in their diet and the severity of their symptoms (including nausea, cramping, bloating, diarrhea, and flatulence) increases with the amount of lactose consumed.
Thus, it is of great importance in the industry to be able to produce food products which are either lactose-free or which have a reduced lactose content.
No common limit values have so far been defined in EU for the lactose content of low- lactose and lactose-free food products but the Finnish Food Safety Authority Evira states that Nordic limit values are a lactose content of less than 10 mg/100 g or 100 ml for lactose-free foods and a lactose content of less than 1 g/100 g or 100 ml for low-lactose foods.
The dairy industry today faces a problem of providing an alternative to adding sweeteners to fermented milk products in order to achieve the desired sweet taste without the added calories. Furthermore, it would be highly advantageous to es- tablish a method for reducing lactose in fermented milk products to a level which will be acceptable for lactose- intolerant consumers. The above problems have been solved by providing mutant Streptococcus ther- mophilus strains and mutant Lactobacillus delbrueckii subsp. bulgaricus strains that excrete glucose into the milk when 9.5% B-milk is inoculated with 106-107 CFU/ml of a Streptococcus {hemophilus strain according to the invention or with 106-107 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Streptococcus thermophilus strains or the Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention at 40°C for at least 20 hours. Preferably, such mutant strains alone will excrete at least 5 mg/ml glucose into B-milk when 9.5% B-milk is inoculated with 106-107 CFU/ml of a Streptococcus thermophilus strain according to the invention or with 106-107 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Streptococcus thermophilus strains or the Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention at 40°C for at least 20 hours. The strains are still fully capable of acidifying milk alt- hough acidification time to pH 5 is delayed by 2-5 hours. The final fermented milk contains less than 15 mg/ml lactose in the fermented milk. The final fermented milk consequently has a higher inner sweetness index of approximately 2 fold or more. To provide the Streptococcus thermophilus strains, the present inventors have found a method of isolating 2-deoxyglucose resistant mutant strains from a galac- tose-fermenting Streptococcus thermophilus mother strain, preferably one with a mutation in the galactose operon which increases the expression of a previously lowly expressed or not expressed operon, wherein the 2-deoxyglucose resistance phenotype is caused by a mutation in the glucokinase (glcK) gene that partially or totally inactivates the encoded protein. The method comprises subjecting the mother strain to 2-deoxyglucose and selecting mutant strains that are able to grow in the presence of 2-deoxyglucose on agar plates containing M17 medi- um+2%galactose, such as described in Example 1 herein. These mutants are screened and strains that have a growth rate which is higher in M17 medium +2% galactose than in M 17 medium+2% glucose are chosen.
It was surprisingly found that the mutant strains of Streptococcus thermophilus with a mutation in the glucokinase gene (glck) but with an apparently normally functioning glucose transporter system were secreting glucose. These mutants were named, CHCC15757 and CHCC15887. Furthermore, the inventors found that strains of Streptococcus thermophilus with an even higher capability for fermentation of lactose and excretion of glucose could be selected by subjecting the strains of Streptococcus thermophilus with a mutation in the glucokinase gene to 2-deoxyglucose and selecting strains which are unable to grow in 9,5% B-milk except when sucrose is added to the B-milk in a concentration of as little as 0.01 %. One such hyper-lactose fermenting and glucose secreting mutant was named CHCC16404.
It was found that CHCC16404 has a mutation in a glucose transporter gene (mariM) resulting in the inactivation of a glucose transporter protein responsible for transport of glucose into the cell,
To provide the Lactobacillus delbrueckii subsp. bulgaricus strains, the present inventors have found a method of isolating 2-deoxyglucose resistant mutant strains of a Lactobacillus delbrueckii subsp. bulgaricus mother strain, which has either lost the ability to grow on glucose as carbon source or has an impaired ability to grow on glucose as carbon source. The method comprises subjecting the mother strain to 2-deoxyglucose and selecting mutant strains that are able to grow in the presence of 2-deoxyglucose on agar plates containing MRS-IM medium containing 2% lactose, such as described in Example 5 herein. These mutants are screened and strains that have either completely lost or have an impaired ability to grow on MRS-IM containing 2% glucose when compared with the mother strain that can grow glucose are chosen. In accordance with this surprising finding, the present invention relates to novel strains of lactic acid bacteria, such as in particular Streptococcus thermophilus with a mutation in the glcK gene or Lactobacillus delbrueckii subsp. bulgaricus mutants, that excrete glucose into the fermented product to provide a natural sweetness without extra calories, a method for producing the strains, fermented milk products made using such strains and use of such strains for preparing fermented milk products with increased sweetness and decreased levels of lactose.
Furthermore, the Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus strains of the invention were, surprisingly, found to boost the growth of Bifidobacterium animalis subsp. lactis strain BB-12®, a pro bi otic bacterium which does not grow well when present alone in milk. BRIEF DESCRIPTION OF THE DRAWINGS
FIGURE 1 is a schematic representation of lactose catabolism in Streptococcus thermophilus. GIcK, glucokinase; LacS, lactose transporter; LacZ, β-galactosidase; GalM, mutarotase; GalK, galactokinase; GalT, galactose- 1-phosphate uridyltrans- ferase; GalE, UDP-glucose 4 epimerase; GallP, galactose- 1-phosphate.
FIGURE 2 depicts the DNA sequence (SEQ ID NO. 1) of the glucokinase gene (glcK) of Streptococcus thermophilus as well as the encoded amino acid sequence (SEQ ID NO. 2). The single nucleotide substitutions found in CHCC15757 and CHCC15887, respectively, are indicated.
FIGURE 3 depicts the man operon encoding the glucose/mannose phosphotransferase system (PTS) in Streptococcus thermophilus. When compared to the moth- er strain, CHCC15757, the hyper-lactose fermenting and glucose secreting mutant CHCC16404 was found to have a mutation in the manM gene encoding the IICMa" protein of the glucose/mannose PTS. The G to T mutation changes the GAA codon for glutamic acid at amino acid position 209 to a TAA stop codon (*) aborting translation in CHCC16404 and inactivating the function of the protein.
FIGURE 4 depicts the DNA sequence (SEQ ID NO. 5) of the manM gene of Strepto¬ coccus thermophilus strain CHCC15757 as well as the encoded amino acid se¬ quence (SEQ ID NO. 6). The single nucleotide substitution found in CHCC16404 is indicated.
DETAILED DISCLOSURE OF THE INVENTION
As used herein, the term "lactic acid bacterium" designates a gram- positive, mi- croaerophilic or anaerobic bacterium, which ferments sugars with the production of acids including lactic acid as the predominantly produced acid, acetic acid and propionic acid. The industrially most useful lactic acid bacteria are found within the order "Lactobacillales" which includes Lactococcus spp., Streptococcus spp., Lactobacillus spp., Leuconostoc spp., Pediococcus spp., Brevibacterium spp., En- terococcus spp. and Propionibacterium spp. Lactic acid bacteria, including bacteria of the species Lactobacillus sp. and Streptococcus thermophilus, are normally supplied to the dairy industry either as frozen or freeze-dried cultures for bulk starter propagation or as so-called "Direct Vat Set" (DVS) cultures, intended for direct inoculation into a fermentation vessel or vat for the production of a dairy product, such as a fermented milk product. Such cultures are in general referred to as "starter cultures" or "starters".
The use of the terms "a" and "an" and "the" and similar referents in the context of describing the invention (especially in the context of the following claims) are to be construed to cover both the singular and the plural, unless otherwise indicated herein or clearly contradicted by context. The terms "comprising", "having", "in- eluding" and "containing" are to be construed as open-ended terms (i.e., meaning "including, but not limited to,") unless otherwise noted. Recitation of ranges of values herein are merely intended to serve as a shorthand method of referring individually to each separate value falling within the range, unless otherwise indicated herein, and each separate value is incorporated into the specification as if it were individually recited herein. All methods described herein can be performed in any suitable order unless otherwise indicated herein or otherwise clearly contradicted by context. The use of any and all examples, or exemplary language (e.g., "such as") provided herein, is intended merely to better illuminate the invention and does not pose a limitation on the scope of the invention unless otherwise claimed. No language in the specification should be construed as indicating any non-claimed element as essential to the practice of the invention.
In some countries, the legal definition of yoghurt requires the presence of both Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus. Both species generate desirable amounts of acetaldehyde, an important flavor compo¬ nent in yoghurt.
Cheese, such as Mozzarella and Pizza cheese as well as Feta, can also be prepared by fermentation using both Streptococcus thermophilus and Lactobacillus del- brueckii subsp. bulgaricus (Hoier et al. (2010) in The Technology of Cheesemak- ing, 2nd Ed. Blackwell Publishing, Oxford; 166-192).
In order to meet the requirements of the food industry, it has become desirable to develop new strains, in particular Lactobacillus delbruckii subsp. bulgaricus strains and Streptococcus thermophilus strains, which produce more natural sweetness directly in the fermented product (inner sweetness) without contributing extra calories. Streptococcus thermophilus is one of the most widely used lactic acid bacteria for commercial milk fermentation where the organism is normally used as part of a mixed starter culture, the other component being a Lactobacillus sp., e.g. Lacto- bacillus delbrueckii subsp. bulgaricus for yoghurt and Lactobacillus helveticus for Swiss- type cheese.
Lactose and sucrose are fermented more readily by Streptococcus thermophilus than their component monosaccharides. Only the glucose portion of the lactose molecule is fermented by Streptococcus thermophilus and galactose accumulates in fermented milk products when Streptococcus thermophilus is used. In yoghurt, wherein high acid concentrations limit the fermentation, free galactose remains while the free galactose produced in the early stages of Swiss cheese manufacture Is later fermented by Lactobacillus helveticus, Lactococcus lactis found in many starter cultures used for cheese manufacture is also capable of consuming the galactose produced by Streptococcus thermophilus.
In order to ensure Streptococcus thermophilus strains with a growth performance as optimal as possible, the present inventors have exposed g a lactose-fermenting strains of Streptococcus thermophilus to the selective agent 2-deoxyglucose. Typically 2-deoxyglucose resistant mutants have mutations in the gene encoding glucokinase and in genes coding for glucose transport. The isolated mutants, CHCC15757, CHCC15887 and CHCC16404, which are resistant to 2-deoxyglucose have mutations in their glucokinase (glcK) gene. In addition to a mutation in the glucokinase gene, the present inventors found that CHCC16404 has a stop codon mutation in a glucose/mannose transporter gene which could explain why exported glucose is not transported back into the cells again.
Surprisingly, such mutants alone are still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. They are therefore as such useful in fermented milk applications and they have preserved the ability of the mother strains to clot the milk which is characteristic of yoghurt. Additionally, it was found that the mutants excreted more than 5 mg/ml glucose, when 9.5% B- milk was inoculated with 106-107 CFU/ml of Streptococcus thermophilus strain CHCC15757 or CHCC15887 and fermented at 40°C for at least 20 hours without the need for isolation of glucose transport mutants, or when 9.5% B-milk with 0.05% sucrose was inoculated with 106-107 CFU/ml of Streptococcus thermophilus strain CHCC 16404 and fermented at 40°C for at least 20 hours. At the same time, as little as approximately 10 mg/ml lactose and less than 1.5 mg/ml lactose (detection limit), respectively, remain in the fermented milk. Therefore, the use of such strains for producing fermented milk products may have an importance for people with lactose intolerance.
Consequently, the final fermented milk has a higher inner sweetness index of at least 2.0 calculated as described by Godshall (1988. Food Technology 42(11) :71- 78).
The first aspect of the present invention, thus, relates to a galactose-fermenting mutant strain of Streptococcus thermophilics, wherein the mutant strain carries a mutation in the DNA sequence of the glcK gene encoding a glucokinase protein, wherein the mutation inactivates the encoded glucokinase protein or has a nega- tive effect on expression of the gene. Methods for measuring the level of glucokinase activity or the level of expression of the glucokinase gene are readily known (Porter et al. (1982) Biochim. Biophys. Acta, 709; 178-186) and include enzyme assays with commercially available kits and transcriptomics or quantitative PCR using materials which are readily available,
A bacterial "strain" as used herein refers to a bacterium which remains genetically unchanged when grown or multiplied. A multiplicity of identical bacteria are included. The term "galactose-fermenting Streptococcus thermophilics strains" as used herein refers to Streptococcus thermophilus strains which are capable of growth on/in M17 medium+2% galactose. The galactose-fermenting Streptococcus thermophilus strains are defined herein as Streptococcus thermophilus strains which lower the pH of M17 broth containing 2% galactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C.
Galactose-fermenting strains may be obtained by the method described in WO 2011/026863.
The term "the mutation inactivates the glucokinase protein" as used herein refers to a mutation which results in an "inactivated glucokinase protein", a glucokinase protein which, if present in a cell, is not able to exert its normal function as well as mutations which prevent the formation of the glucokinase protein or result in degradation of the glucokinase protein, In particular, an inactivated glucokinase protein is a protein which compared to a functional glucokinase protein is not able to facilitate phosphorylation of glucose to glucose-6-phosphate or facilitates phosphorylation of glucose to glucose-6- phosphate at a significantly reduced rate. The gene encoding such an inactivated glucokinase protein compared to the gene encoding a functional glucokinase pro- tein comprises a mutation in the open reading frame (ORF) of the gene, wherein said mutation may include, but is not limited to, a deletion, a frameshift mutation, introduction of a stop codon or a mutation which results in an amino acid substitution, which changes the functional properties of the protein, or a promoter mutation that reduces or abolishes transcription or translation of the gene.
In preferred embodiments the mutation reduces the activity (the rate of phosphorylation of glucose to glucose-6-phosphate) of the glucokinase protein with at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%.
The glucokinase activity can be determined by the glucokinase enzymatic assays as described by Pool et al. (2006, Metabolic Engineering 8;456-464).
The term "functional glucokinase protein" as used herein refers to a glucokinase protein which, if present in a cell, facilitates phosphorylation of glucose to glu- cose-6-phosphate. In particular, a functional glucokinase protein may be encoded by a gene comprising an ORF which has a sequence corresponding to position 1- 966 in SEQ ID NO. 1 or a sequence which has at least 85% identity, such as at least 90% identity, such as at least 95% identity, such as at least 98% identity, such as at least 99% identity, to the sequence corresponding to position 1-966 of SEQ ID NO. 1.
The percent identity of two sequences can be determined by using mathematical algorithms, such as the algorithm of Karlin and Altschul (1990. Proc. Natl. Acad. Sci. USA 87;2264), the modified algorithm described in Karlin and Altschul (1993. Proc. Natl. Acad. Sci. USA 90; 5873-5877); the algorithm of Myers and Miller ( 1988. CABIOS 4; 11-17) ; the algorithm of Need!eman and Wunsch (1970. J. Mol. Biol. 48;443-453); and algorithm of Pearson and Lipman (1988. Proc. Natl. Acad. Sci. USA 85; 2444-2448). Computer software for the determination of nucleic acid or amino acid sequence identity based on these mathematical algorithms is also available. For example, the comparison of nucleotide sequences can be performed with the BLASTN program, score= 100, wordlength= 12. The comparison of amino acid sequences can be performed with the BLASTX program, score=50, word- length=3. For the remaining parameters of the BLAST programs, the default parameters can be used. In many countries the use of genetically modified organisms (GMOs) for fermented milk products is not accepted. The present invention instead provides for a method of obtaining naturally occurring or induced mutant strains which can provide a desirable accumulation of glucose in the fermented milk product. Thus, in a much preferred embodiment of the present invention the mutant strain is a naturally occurring mutant or an induced mutant.
A "mutant bacterium" or a "mutant strain" as used herein refers to a natural (spontaneous, naturally occurring) mutant bacterium or an induced mutant bacte- rium comprising one or more mutations in its genome (DNA) which are absent in the wild type DNA. An "induced mutant" is a bacterium where the mutation was induced by human treatment, such as treatment with chemical mutagens, UV- or gamma radiation etc. In contrast, a "spontaneous mutant" or "naturally occurring mutant" has not been mutagenized by man. Mutant bacteria are herein, non-GMO (non-genetically modified organism), i.e. not modified by recombinant DNA technology.
"Wild type strain" refers to the non-mutated form of a bacterium, as found in nature.
Terms such as "strains with a sweetening property", "strains which can provide a desirable accumulation of glucose in the fermented milk product" and "strains with enhanced properties for natural sweetening of food products" are used interchangeably herein to characterize an advantageous aspect of using the strains of the present invention in fermentation of milk products. In a preferred embodiment, the mutant strain of Streptococcus thermophilus according to the invention increases the amount of glucose in 9.5% B-milk to at least 5 mg/mL when inoculated into the 9,5% B-milk at a concentration of 106- 107 CFU/ml and grown at 40°C for at least 20 hours.
In another preferred embodiment, the mutant strain of Streptococcus thermophilus according to the invention increases the amount of glucose in 9.5% B-milk with 0,05% sucrose to at least 5 mg/mL when inoculated into the 9.5% B-milk with 0,05% sucrose at a concentration of 106-107 CFU/ml and grown at 40°C for at least 20 hours.
In the present context, 9,5% B-milk is boiled milk made with reconstituted low fat skim milk powder to a level of dry matter of 9.5% and pasteurized at 99°C for 30 min. followed by cooling to 40°C.
In more preferred embodiments of the invention the mutant strain leads to an increase in the amount of glucose to at least 6 mg/mL, such as at least 7 mg/mL, such as at least 8 mg/mL, such as at least 9 mg/ml, such as at least 10 mg/ml, such as at least 11 mg/ml, such as at least 12 mg/ml, such as at least 13 mg/ml, such as at least 14 mg/ml, such as at least 15 mg/ml, such as at least 20 mg/ml, such as at least 25 mg/ml.
In another embodiment of the invention the mutant strain of Streptococcus thermophilus is resistant to 2-deoxyglucose.
The term "resistant to 2-deoxyglucose" herein is defined by that a particular mutated bacterial strain has the ability to grow to a colony when streaked on a plate of M17 medium containing 20 mM 2-deoxyglucose after incubation at 40°C for 20 hours. The presence of 2-deoxygluxcose in the culture medium will prevent the growth of non-mutated strains while the growth of the mutated strains is not affected or not affected significantly. Non-mutated strains which can be used as sensitive reference strains in the assessment of resistance preferably include the strains CHCC14994 and CHCC11976. Examples 1 and 2 herein exemplify the isolation of mutant strains of Streptococcus thermophilus which are resistant to 2-deoxyglucose. In yet another embodiment, the mutant strain according to the invention can be characterized by its growth pattern. This is illustrated by the finding that the growth rate of the mutant strain is higher in Ml? medium +2% galactose than in M17 medium+2% glucose. The growth rate is measured as the development in optical density of the exponentially growing culture at 600 nanometers (OD600) with time as described in Example 2 herein.
In a preferred embodiment the growth rate is at least 5% higher, such as at least 10% higher, such as at least 15% higher, such as at least 20% higher, in M 17 medium+2% galactose than in M 17 medium+2% glucose.
In a preferred embodiment the mutation results in the replacement of the codon coding for serine with the codon coding for proline in position 72 in SEQ ID NO. 2. Preferably the mutation in the glcK gene results in the replacement of a T with a C on position 214 in SEQ ID NO. 1.
In another preferred embodiment the mutation results in the replacement of the codon coding for threonine with the codon coding for isoleucine in position 141 in SEQ ID NO. 2.
Preferably, the mutation in the glcK gene results in the replacement of a C with a T on position 422 in SEQ ID NO. 1.
It should be emphasized that the glcK gene of a Streptococcus thermophilus may be inactivated by other types of mutations in other sites of the glcK gene.
In a preferred embodiment the Streptococcus thermophilus strain carries a mutation that reduces the transport of glucose into the cell. The term "a mutation that reduces the transport of glucose into the cell" as used herein refers to a mutation in a gene encoding a protein involved in transport of glucose which results in an accumulation of glucose in the environment of the cell. The level of glucose in the culture medium of a Streptococcus thermophilus strain can readily be measured by methods known to the skilled person and as described in Example 4 herein also when the culture medium is a milk substrate. In preferred embodiments the mutation reduces the transport of glucose into the cell with at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%, The transport of glucose into the cell can be determined by the glucose uptake assay as described by Cochu et al. (2003. Appl Environ Microbiol 69(9); 5423- 5432).
Preferably, the Streptococcus thermophilus strain carries a mutation in a gene en- coding a component of a glucose transporter, wherein the mutation inactivates the glucose transporter protein or has a negative effect on expression of the gene.
The component may be any component of a glucose transporter protein which is critical for the transport of glucose. E.g., it is contemplated that inactivation of any component of the glucose/mannose PTS in Streptococcus thermophilus depicted in Figure 3 will result in inactivation of the glucose transporter function.
The term "the mutation inactivates the glucose transporter" as used herein refers to a mutation which results in an "inactivated glucose transporter", a glucose transporter protein which, if present in a cell, is not able to exert its normal function as well as mutations which prevent the formation of the glucose transporter protein or result in degradation of the glucose transporter protein.
In particular, an inactivated glucose transporter protein is a protein which com- pared to a functional glucose transporter protein is not able to facilitate transport of glucose over a plasma membrane or facilitates transport of glucose over a plasma membrane at a significantly reduced rate. The gene encoding such an inactivated glucose transporter protein compared to the gene encoding a functional glucose transporter protein comprises a mutation in the open reading frame (ORF) of the gene, wherein said mutation may include, but is not limited to, a deletion, a frameshift mutation, introduction of a stop codon or a mutation which results in an amino acid substitution, which changes the functional properties of the protein, or a promoter mutation that reduces or abolishes transcription or translation of the gene. In preferred embodiments the mutation reduces the activity (the rate of transport of glucose) of the glucose transporter protein by at least 50%, such as at least 60%, such as at least 70%, such as at least 80%, such as at least 90%. The glucose transporter activity can be determined by the glucose uptake assay as described by Cochu et al. (2003. Appl Environ Microbiol 69(9); 5423-5432).
The term "functional glucose transporter protein" as used herein refers to a glucose transporter protein which, if present in a cell, facilitates transport of glucose over a plasma membrane.
More preferred the Streptococcus thermophilus strain carries a mutation in the DNA sequence of the manM gene encoding the IICMan protein of the glucose/man nose phosphotransferase system, wherein the mutation inactivates the IICMan protein or has a negative effect on expression of the gene.
In an even more preferred embodiment the mutation results in the replacement of the codon coding for glutamic acid with a stop codon in position 209 of SEQ ID NO. 6 of the IICMan protein of the glucose/mannose phosphotransferase system. Preferably, the mutation results in the replacement of a G with a T in position 625 of SEQ ID NO. 5.
A second aspect of the invention relates to a Streptococcus thermophilus strain selected from the group consisting of the Streptococcus thermophilus CHCC15757 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25850, a Streptococcus thermophilus CHCC15887 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25851, the Streptococcus thermophilus CHCC16404 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26722 and strains derived therefrom.
In the present context, the term "strains derived therefrom" should be understood as strains derived, or strains which can be derived from a strain (or their mother strain) of the invention by means of e.g. genetic engineering, radiation and/or chemical treatment. The "strains derived therefrom" can also be spontaneously occurring mutants. It is preferred that the "strains derived therefrom" are func- tionally equivalent mutants, e.g. mutants that have substantially the same, or improved, properties (e.g. regarding excretion of glucose) as their mother strain. Such "strains derived therefrom" are part of the present invention. Especially, the term "strains derived therefrom" refers to strains obtained by subjecting a strain of the invention to any conventionally used mutagenization treatment including treatment with a chemical mutagen such as ethane methane sulphonate (EMS) or N-methyl-N'-nitro-N-nitroguanidine (NTG), UV light, or to a spontaneously occurring mutant. A mutant may have been subjected to several mutagenization treatments (a single treatment should be understood as one mutagenization step followed by a screening/selection step), but it is presently preferred that no more than 20, or no more than 10, or no more than 5, treatments (or screening/selection steps) are carried out. In a presently preferred mutant less than 1%, less than 0.1%, less than 0.01%, less than 0.001% or even less than 0.0001% of the nucleotides in the bacterial genome have been replaced with another nucleo- tide, or deleted, compared to the mother strain.
Accordingly, in a preferred embodiment the Streptococcus thermophilus strain is selected from the group consisting of the Streptococcus thermophilus CHCC15757 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25850, a Streptococcus thermophilus
CHCC15887 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25851, the Streptococcus thermophilus CHCC16404 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26722 and a mutant strain derived therefrom, wherein the mutant strain is obtained by using one of the deposited strains as starting material, and wherein the mutant has retained or further improved the lactose fermenting property and/or the glucose secreting property of said deposited strain. Lactobacillus delbrueckii subsp. bulgaricus is a lactic acid bacterium which is frequently employed for commercial milk fermentation where the organism is normally used as part of a mixed starter culture.
Lactose is fermented more readily than the monosaccharides glucose, fructose, and mannose by Lactobacillus delbrueckii subsp. bulgaricus and strains of this species normally do not grow on galactose (Buchanan R.E., Gibbons N.E., eds (1974) : Bergey's manual of determinative bacteriology (The Williams & Wilkins Co. Baltimore, Md), 8th ed,). During fermentation of lactose by Lactobacillus del- brueckii subsp. bulgaricus, only the glucose portion of the lactose molecule is fermented and thus galactose accumulates in fermented milk products. In order to obtain Lactobacillus delbrueckii subsp, bulgaricus strains which are unable to grow on glucose as carbon source, the present inventors have exposed strains of Lactobacillus delbrueckii subsp, bulgaricus to 2-deoxyglucose. The isolated mutants were resistant to 2-deoxyglucose and capable of growing in a milk substrate without using glucose as a carbon source. The mutants were found to increase the glucose content of milk. Accordingly, fermented milk products produced by use of these strains are characterized by a higher amount of glucose which renders the products sweeter in taste.
Surprisingly, the Lactobacillus delbrueckii subsp, bulgaricus strains of the inven- tion alone are still fully capable of acidifying milk although acidification time to pH 5 is delayed by 2-5 hours. Additionally, as demonstrated in the Examples, it was found that the strains excreted approximately 5 mg/ml or more glucose while less than approximately 10 mg/ml lactose remained in the fermented milk when 9.5% B-milk was inoculated with 106-107 CFU/ml of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention and fermented with the Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention at 40°C for at least 20 hours. Therefore, the use of such strains for producing fermented milk prod¬ ucts may have an importance for people with lactose intolerance. Consequently, the final fermented milk has a higher inner sweetness index of approximately 2 or higher calculated as described by Godshall (1988. Food Technol¬ ogy 42(ll) :71-78), such as 2.5 or higher or such as 3 or higher.
The third aspect of the present invention relates to a Lactobacillus delbrueckii subsp. bulgaricus strain, wherein said strain is resistant to 2-deoxyglucose.
The term "resistant to 2-deoxyglucose" in relation to a Lactobacillus delbrueckii subsp. bulgaricus strain is defined by that a particular bacterial strain has the ability to grow to a colony after incubation at 40°C for 20 hours when streaked on a plate of MRS-IM medium containing 2% lactose and 20 mM 2-deoxyglucose. The presence of 2-deoxyglucose in the culture medium will prevent the growth of non- resistant strains while the growth of resistant strains is not affected or not affect- ed significantly, Non-resistant Lactobacillus delbrueckii subsp. bulgaricus strains which can be used as sensitive reference strains in the assessment of resistance include the Lactobacillus delbrueckii subsp. bulgaricus strains CHCC759, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under the accession no. DSM 26419 and CHCC10019, that was deposited
Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under the accession no. DSM 19252.
In the event the MRS-IM agar plates containing 2% lactose and furthermore con- taining 20 mM 2-deoxyglucose plate is overgrown with colonies, it is appropriate to increase the concentration of 2-deoxyglucose in the plates, for example to 30 mM or even 40 mM or higher. In the event no colonies are obtained, it is appropriate to decrease the concentration of 2-deoxyglucose in the plates, for example to 15 mM or 10 mM or even lower. If considered necessary, the mutation rate can be enhanced by using appropriate physical or chemical mutagenesis protocols.
Preferably, the Lactobacillus delbrueckii subsp. bulgaricus strain of the invention increases the amount of glucose in 9.5% B-milk to at least 5 mg/ml when inoculated into the 9.5% B-milk at a concentration of 106 to 107 CFU/ml and grown at 40°C for at least 20 hours, such as for between 20 to 30 hours, such as for 20 hours.
In more preferred embodiments of the invention the mutant strain leads to an increase in the amount of glucose to at least 6 mg/ml, such as at least 7 mg/ml, such as at least 8 mg/mL, such as at least 9 mg/ml, such as at least 10 mg/ml, such as at least 11 mg/ml, such as at least 12 mg/ml, such as at least 13 mg/ml, such as at least 14 mg/ml, such as at least 15 mg/ml.
A fourth aspect of the invention relates to a Lactobacillus delbrueckii subsp. bul- garicus strain which is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26420, the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160, that was deposited at Deutsche Sammiung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26421, and strains derived therefrom.
The term "strains derived therefrom" should be understood as defined above. Accordingly, in a preferred embodiment the Lactobacillus delbrueckii subsp, bul- garicus strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159, that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26420, the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160, that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession no. DSM26421 and a mutant strain derived therefrom, wherein the mutant strain is obtained by using one of the deposited strains as starting material, and wherein the mutant has retained or further improved the lactose fermenting property and/or the glucose secreting property of said deposited strain.
A fifth aspect of the present invention relates to a composition comprising from 104 to 1012 CFU (colony forming units)/g of a Streptococcus thermophilus strain according to the first or second aspect of the invention, such as from 10s to 1011 CFU/g, such as from 106 to 1010 CFU/g, or such as from 107 to 109 CFU/g of the Streptococcus thermophilus strain.
In a preferred embodiment the Streptococcus thermophilus strain is unable to acidify 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% B-milk is inoculated with 106-107 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C, and the composition further comprises an amount of a compound, which can trigger acidification of the 9.5% B-milk by the Streptococcus thermophilus strain CHCC16404 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM
26722, defined as resulting in a pH decrease of 1.0 or more when 9.5% B-milk is inoculated with 106-107 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40° C. Preferably, the compound is sucrose.
Preferably, the amount of sucrose is from 0.000001% to 2%, such as from 0.00001% to 0.2%, such as from 0.0001% to 0.1%, such as from 0.001% to 0.05%.
In an especially preferred embodiment the composition further comprises from 104 to 1012 CFU/g of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention, such as from 105 to 1011 CFU/g, such as from 106 to 1010 CFU/g, or such as from 107 to 109 CFU/g of the LactobaciHus delbrueckii subsp. bulgaricus strain. A preferred composition of the present invention comprises, for example, Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160 in combination with Streptococcus thermophilus strain CHCC15757. A further preferred composition comprises Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 in combination with Streptococcus thermophilus strain CHCC15887. An even further preferred composition comprises Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16159 and/or Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 in combination with Streptococcus thermophilus strain CHCC16404.
Lactobacillus delbrueckii subsp. bulgaricus, Streptococcus thermophilus and other lactic acid bacteria are commonly used as starter cultures serving a technological purpose in the production of various foods, such as in the dairy industry, such as for fermented milk products, Thus, in another preferred embodiment the composi- tion is suitable as a starter culture.
Starter cultures may be provided as frozen or dried starter cultures in addition to liquid starter cultures. Thus, in yet another preferred embodiment the composition is in frozen, freeze-dried or liquid form.
As disclosed in WO 2005/003327, it is beneficial to add certain cryoprotective agents to a starter culture. Thus, a starter culture composition according to the present invention may comprise one or more cryoprotective agent(s) selected from the group consisting of inosine- 5'- monophosphate (IMP), adenosine -5'- monophosphate (AMP), guanosine-5'-monophosphate (GMP), uranosine-5'- monophosphate (UMP), cytidine-5'-monophosphate (CMP), adenine, guanine, uracil, cytosine, adenosine, guanosine, uridine, cytidine, hypoxanthine, xanthine, hy- poxanthine, orotidine, thymidine, inosine and a derivative of any such compounds.
A sixth aspect of the invention is directed to a method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to the first or second aspect of the present invention.
The term "milk" is to be understood as the lacteal secretion obtained by milking any mammal, such as a cow, a sheep, a goat, a buffalo or a camel. In a preferred embodiment, the milk is cow's milk.
The term "milk substrate" may be any raw and/or processed milk material that can be subjected to fermentation according to the method of the invention. Thus, useful milk substrates include, but are not limited to, solutions/suspensions of any milk or milk like products comprising protein, such as whole or low fat milk, skim milk, buttermilk, reconstituted milk powder, condensed milk, dried milk, whey, whey permeate, lactose, mother liquid from crystallization of lactose, whey protein concentrate, or cream. Obviously, the milk substrate may originate from any mammal, e.g. being substantially pure mammalian milk, or reconstituted milk powder.
Preferably, at least part of the protein in the milk substrate is proteins naturally occurring in milk, such as casein or whey protein. However, part of the protein may be proteins which are not naturally occurring in milk.
Prior to fermentation, the milk substrate may be homogenized and pasteurized according to methods known in the art. "Homogenizing" as used herein means intensive mixing to obtain a soluble suspension or emulsion. If homogenization is performed prior to fermentation, it may be performed so as to break up the milk fat into smaller sizes so that it no longer separates from the milk. This may be accomplished by forcing the milk at high pressure through small orifices.
"Pasteurizing" as used herein means treatment of the milk substrate to reduce or eliminate the presence of live organisms, such as microorganisms. Preferably, pasteurization is attained by maintaining a specified temperature for a specified period of time. The specified temperature is usually attained by heating. The tem- perature and duration may be selected in order to kill or inactivate certain bacteria, such as harmful bacteria. A rapid cooling step may follow. "Fermentation" in the methods of the present invention means the conversion of carbohydrates into alcohols or acids through the action of a microorganism. Preferably, fermentation in the methods of the invention comprises conversion of lactose to lactic acid.
Fermentation processes to be used in production of fermented milk products are well known and the person of skill in the art will know how to select suitable process conditions, such as temperature, oxygen, amount and characteristics of mi- croorganism(s) and process time. Obviously, fermentation conditions are selected so as to support the achievement of the present invention, i.e. to obtain a dairy product in solid or liquid form (fermented milk product).
The term "fermented milk product" as used herein refers to a food or feed product wherein the preparation of the food or feed product involves fermentation of a milk substrate with a lactic acid bacteria. "Fermented milk product" as used herein includes but is not limited to products such as yoghurt, cheese, sour cream and buttermilk as well as fermented whey.
In a preferred embodiment the concentration of Streptococcus thermophilus cells inoculated is from 104 to 109 CFU Streptococcus thermophilus cells per ml of milk substrate, such as from 104 CFU to 108 CFU Streptococcus thermophilus cells per ml of milk substrate.
In another preferred embodiment the Streptococcus thermophilus strain is unable to acidify the 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% B-milk is inoculated with 106-107 CFU/ ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C, and the milk substrate is added an amount of a compound, effective to trigger acidification of 9.5% B-milk by the Streptococcus thermophilus strain CHCC16404 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26722, defined as resulting in a pH decrease of 1.0 or more when 9.5% B- milk is inoculated with 105-107 CFU/ml of the Streptococus thermophilus strain and incubated for 14 hours at 40°C. Preferably, the compound is sucrose. Preferably, the amount of sucrose is from 0,000001% to 2%, such as from 0.00001% to 0.2%, such as from 0.0001% to 0.1%, such as from 0.001% to 0.05%. A seventh aspect of the invention is directed to a method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the present invention. In a preferred embodiment the concentration of Lactobacillus delbrueckii subsp, bulgaricus cells inoculated is from 104 to 109 CFU Lactobacillus delbrueckii subsp. bulgaricus cells per ml of milk substrate, such as from 104 CFU to 10s CFU Lactobacillus delbrueckii subsp. bulgaricus cells per ml of milk substrate, In a preferred embodiment the method for producing the fermented milk product comprises inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to the present invention and at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the present invention.
In another preferred embodiment the fermented milk product is a yoghurt or a cheese.
Examples of cheeses which are prepared by fermentation with Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus include Mozzarella and pizza cheese (Hoier et al. (2010) in The Technology of Cheese ma king, 2nd Ed. Blackwll Publishing, Oxford; 166-192).
Preferably the fermented milk product is a yoghurt.
In the present context, a yoghurt starter culture is a bacterial culture which com¬ prises at least one Lactobacillus delbrueckii subsp bulgaricus strain and at least one Streptococcus thermophilus strain. In accordance herewith, the term "yoghurt" refers to a fermented milk product obtainable by inoculating and ferment- ing milk with a composition comprising a Lactobacillus delbrueckii subsp bulgaricus strain and a Streptococcus thermophilus strain. In an eighth aspect the present invention relates to a fermented milk product obtainable by the method according the sixth or seventh aspect of the invention,
In a ninth aspect the present invention relates to a fermented milk product com- prising at least one Streptococcus thermophilus strain according to the first or second aspect of the invention.
In a tenth aspect the present invention relates to a fermented milk, product comprising at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention.
In a preferred embodiment the fermented milk product comprises at least one Streptococcus thermophilus strain according to the invention and at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention,
In another preferred embodiment the fermented milk product is a yoghurt or a cheese. Preferably, the fermented milk product is a yoghurt.
In an eleventh aspect the present invention relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention for the preparation of a fermented milk product.
In a twelfth aspect the present invention relates to the use of a Lactobacillus delbrueckii subsp. bulgaricus according to the third or fourth aspect of the invention for the preparation of a fermented milk product,
A thirteenth aspect of the present invention relates to the use of a Streptococcus thermophilus strain according to the invention and a Lactobacillus delbrueckii subsp. bulgaricus according to the invention for the preparation of a fermented milk product.
A fourteenth aspect relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the Invention for increasing the sweetness of a fermented milk product In a fifteenth aspect the present invention is directed to the use of a Lactobacillus delbrueckii subsp. buigaricus strain according to the third and fourth aspect of the invention for increasing the sweetness of a fermented milk product. In a sixteenth aspect the present invention is directed to the use of a Streptococcus thermopMius strain according to the first or second aspect of the invention and a Lactobacillus delbrueckii subsp. buigaricus strain according to the third and fourth aspect of the invention for increasing the sweetness of a fermented milk product.
Especially, children as a consumer group have a preference for sweet-tasting food products and it is contemplated that the Streptococcus thermophilus strain of the invention and the Lactobacillus delbrueckii subsp. buigaricus strain of the invention may be particularly useful in increasing the sweetness of a fermented milk product intended for children.
A seventeenth aspect of the present invention relates to a fermented milk product according to the invention for use in reducing the calorie intake. The fermented milk product according to the invention is thought to be especially useful in the diet of persons suffering from overweight or obesity.
Thus, in a preferred embodiment the fermented milk product according to the invention is for use in reducing the calorie intake of a person suffering from over- weight or obesity.
Overweight and obesity are medical conditions defined by the World Health Organization (WHO) as abnormal or excessive fat accumulation that presents a risk to health. The Body Mass Index (BM1) can be used as a rough guide to classify overweight and obesity in adults and is calculated as a person's weight in kilograms divided by the square of his/her height in meters (kg/m2). The WHO definition states that a BMI greater than or equal to 25 is overweight and that a BMI greater than or equal to 30 is obesity. An eighteenth aspect of the present invention relates to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention for decreasing the lactose content in a fermented milk product. In a nineteenth aspect the present invention is directed to the use of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention for decreasing the lactose content in a fermented milk product.
A twentieth aspect of the present invention is related to the use of a Streptococcus thermophilus strain according to the first or second aspect of the invention and a Lactobacillus delbrueckii subsp. bulgaricus strain according to the third or fourth aspect of the invention for decreasing the lactose content in a fermented milk product.
A twenty-first aspect of the present invention is directed to a fermented milk product according to the invention for use in avoiding symptoms of lactose intolerance.
A twenty-second aspect relates to a composition of the invention for use as a medicament.
In a twenty-third aspect the invention is directed to the use of a Streptococcus thermophilus strain according to the invention for improving the growth of a Bifidobacterium stra i n .
In a preferred embodiment the Bifidobacterium strain belongs to a species selected from the group consisting of Bifidobacterium longum, Bifidobacterium bifidum, Bifidobacterium Iactis, Bifidobacterium brevis, Bifidobacterium animalis, Bifidobac- terium adolescentis and Bifidobacterium infantis, such as a strain selected from the group consisting of Bifidobacterium animalis subsp. Iactis BB-12® strain deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession No. DSM 15954, Bifidobacterium animalis strain deposited at DSMZ under accession No, DSM 15954, Bifidobacterium longum subsp. infantis strain deposited at DSMZ under accession No. DSM 15953 and Bifidobacterium longum subsp. longum strain deposited at DSMZ under accession No. DSM 15955. Most preferred the Bifidobacterium strain is Bifidobacterium animalis subsp. Iactis B8-12® deposited at DSMZ under accession No. DSM 15954. In a twenty-fourth aspect the invention relates to the use of a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention for improving the growth of a Bifidobacterium strain. In a preferred embodiment the Bifidobacterium strain belongs to a species selected from the group consisting of Bifidobacterium longum, Bifidobacterium bifidum, Bifidobacterium I act is, Bifidobacterium brevis, Bifidobacterium animalis, Bifidobacterium adolescentis and Bifidobacterium infantis, such as a strain selected from the group consisting of Bifidobacterium animalis subsp. lactis BB-12® strain deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) under accession No. DSM 15954, Bifidobacterium animalis strain deposited at DSMZ under accession No, DSM 15954, Bifidobacterium longum subsp. infantis strain deposited at DSMZ under accession No. DSM 15953 and Bifidobacterium longum subsp. longum strain deposited at DSMZ under accession No. DSM 15955. Most preferred the Bifidobacterium strain is Bifidobacterium animalis subsp. lactis BB-12® deposited at DSMZ under accession No. DSM 15954.
A twenty-fifth aspect relates to the use of a a Streptococcus thermophiius strain according to the invention and a Lactobacillus delbrueckii subsp. bulgaricus strain according to the invention for for improving the growth of Bifidobacterium animalis subsp. lactis strain BB-12® that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 15954. 2-deoxyglucose and a determination of the growth pattern of the bacteria in M17 medium+2% galactose compared to in M17 medium +2% glucose is used for the selection of bacteria having a mutation in the glucokinase (glcK) gene.
In a twenty-sixth aspect of the present invention a method for screening and iso- lating a strain of Streptococcus thermophiius with a mutated glcK gene is provided. The method comprises the following steps:
a) providing a galactose-fermenting Streptococcus thermophiius mother strain; b) selecting and isolating from a pool of mutant Streptococcus thermophiius strains derived from the mother strain a pool of mutant Streptococcus thermophi- Ius strains which are resistant to 2-deoxyglucose; and
c) selecting and isolating from the pool of mutant Streptococcus thermophiius strains which are resistant to 2-deoxyglucose a mutant Streptococcus thermophiius strain if the growth rate of the mutant Streptococcus thermophiius strain is higher in M17 medium+2% galactose than in M17 medium+2% glucose.
The term "resistant to 2-deoxyglucose" herein is defined by that a particular mutated bacterial strain has the ability to grow to a colony when streaked on a plate of M17 medium containing 2% lactose or 2% galactose and containing 20 mM 2- deoxyglucose after incubation at 40°C for 20 hours. The presence of 2- deoxygluxcose in the culture medium will prevent the growth of non-mutated strains while the growth of the mutated strains is not affected or not affected sig- niflcantly. Non-mutated strains which can be used as sensitive reference strains in the assessment of resistance include the strains CHCC14994 and CHCC11976.
Examples 1 and 2 herein exemplify the isolation of mutant strains of Streptococcus thermophilus which are resistant to 2-deoxyglucose.
In a preferred embodiment the method further comprises the step al) subjecting the mother strain to mutagenization, such as subjecting the mother strain to a chemical and/or a physical mutagen. In another preferred embodiment the method further comprises a step d) selecting and isolating from a pool of 2-deoxyglucose resistant Streptococcus thermophilus strains derived from the Streptococcus thermophilus strain selected in step c) a Streptococcus thermophilus strain if the growth rate of the Streptococcus thermophilus strain is high in M17 medium+2% sucrose but zero or at least 0-50% reduced compared to the growth rate of the mother strain in M17 medium+2% glucose.
The galactose-fermenting Streptococcus thermophilus mother strains are capable of growth on/in M17 medium+2% galactose and are defined herein by that they have the ability to lower the pH in M17 broth containing 2% galactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C. Such galactose-positive strains have been described in the prior art and WO2011/026863 (Chr. Hansen A/S) describes a method for obtaining such strains.
In a much preferred embodiment the mother strain is selected from the group consisting of the Streptococcus thermophilus CHCC14994 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25838, the Streptococcus thermophilus CHCC11976 strain that was de- posited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 22934, and strains derived therefrom. In the present context, the term "strains derived therefrom" should be understood as strains derived, or strains which can be derived from galactose-fermenting Streptococcus thermophilus mother strains by means of e.g. genetic engineering, radiation and/or chemical treatment. The "strains derived therefrom" can also be spontaneously occurring mutants. It is preferred that the "strains derived therefrom" are functionally equivalent mutants, e.g. mutants that have substantially the same, or improved, properties (e.g. regarding fermentation of galactose) as their mother strain. Such "strains derived therefrom" are part of the present invention. Especially, the term "strains derived therefrom" refers to strains obtained by subjecting a strain of the invention to any conventionally used mutagenization treatment including treatment with a chemical mutagen such as ethane methane sulphonate (EMS) or N-methyl-N'-nitro-N-nitroguanidine (NTG), UV light, or to a spontaneously occurring mutant, A mutant may have been subjected to several mutagenization treatments (a single treatment should be understood one muta- genization step followed by a screening/selection step), but it is presently preferred that no more than 20, or no more than 10, or no more than 5, treatments (or screening/selection steps) are carried out, In a presently preferred mutant less than 1%, less than 0.1%, less than 0.01%, less than 0.001% or even less than 0.0001% of the nucleotides in the bacterial genome have been replaced with an- other nucleotide, or deleted, compared to the mother strain.
In a twenty- seventh aspect a mutant Streptococcus thermophilus strain obtainable by the method according to the twentyseventh aspect is comprised herein. In a twenty-eighth aspect of the present invention a method for screening and isolating a strain of Lactobacillus delbrueckii subsp, bulgaricus with an impaired glucose metabolism is provided. The method comprises the following steps:
a) providing a Lactobacillus delbrueckii subsp, bulgaricus mother strain;
b) selecting and isolating from a pool of mutant Lactobacillus delbrueckii subsp. bulgaricus strains derived from the mother strain a pool of Lactobacillus del¬ brueckii subsp. bulgaricus strains which are resistant to 2-deoxyglucose; and c) selecting and isolating from the pool of Lactobacillus delbrueckii subsp. bulgaricus strains which are resistant to 2-deoxyglucose a Lactobacillus delbrueckii subsp. bulgaricus strain if the growth rate of the Lactobacillus delbrueckii subsp. bulgaricus strain is higher in MRS-IM medium+2% lactose than in MRS-IM medi- um+2% glucose. The isolation of mutant strains of Lactobacillus delbrueckii subsp. bulgaricus strains which are resistant to 2-deoxyglucose is described in detail in the Examples. Based on the 2-deoxyglucose resistance selection assay of Example 5, the skilled person can routinely test for a specific strain of interest (e.g. one from a relevant commercial product) if this specific strain of interest has the herein relevant resistance to 2-deoxyglucose. Based on the 2-deoxyglucose resistance mutant growth pattern of Example 6 the skilled person can routinely test for a specific strain of interest (e.g. one from a relevant commercial product) if this specific strain of interest has the relevant growth pattern which is a property of the se- lected mutants.
In a preferred embodiment the method further comprises the step al) subjecting the mother strain to mutagenization, such as subjecting the mother strain to a chemical and/or a physical mutagen.
The Lactobacillus delbrueckii subsp. bulgaricus mother strains are capable of growing on/in MRS-IM medium +2% lactose and are defined herein by that they have the ability to lower the pH in MRS-IM broth containing 2% lactose as sole carbohydrate to 5.5 or lower when inoculated from an overnight culture at 1% and incubated for 24 hours at 37°C.
In a much preferred embodiment the mother strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus CHCC759 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen un- der accession No. DSM 26419, the Lactobacillus delbrueckii subsp. bulgaricus
CHCC10019 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 19252, and strains derived therefrom. In a twenty-ninth aspect a Lactobacillus delbrueckii subsp. bulgaricus strain ob¬ tainable by the method according to the twenty-eighth aspect is comprised here¬ in.
Embodiments of the present invention are described below, by way of non-limiting ex- amples. EXAMPLES
Materials and methods
Medium :
For Streptococcus thermophilus, the medium used is the M17 medium known to persons skilled in the art.
The M17 agar medium has the following composition per litre H20: agar, 12.75 g
ascorbic acid, 0.5 g
casein peptone (tryptic), 2.5 g
disodium β-glycerophosphate penta hydrate, 19 g
magnesium sulfate hydrate, 0.25 g
meat extract, 5 g
meat peptone (peptic), 2.5 g
soyapeptone (papainic), 5 g
yeast extract, 2.5 g
final pH 7.1 ±0.2 (25°C) and M17 broth has the following composition per litre H20: ascorbic acid, 0.5 g
magnesium sulfate, 0.25 g
meat extract, 5 g
meat peptone (peptic), 2.5 g
sodium glycerophosphate, 19 g
soya peptone (papainic), 5 g
tryptone, 2.5 g
yeast extract, 2.5 g
final pH 7.0±0.2 (25°C)
Carbon sources added are sterile lactose 20 g/l, glucose 20 g/l or galactose 20 g/l.
As known to the skilled person, the M 17 medium is a medium that is considered to be suitable for growth of Streptococcus thermophilus. Further, as understood by the skilled person, in the present context, a M17 concentrate may be supplied from different suppliers and independently of the specific supplier one will (within standard measurement uncertainty) get the same herein relevant result of 2- deoxyglucose resistance for a herein relevant cell of interest.
The medium used for culturing Lactobacillus delbrueckii subsp. bulgaricus was MRS-IM medium. MRS-IM was used either in the form of agar plates or broth.
The MRS-IM agar medium had the following composition per litre H20;
Tryptone Oxoid L 42 10.0 g
Yeast extract Oxo id L 21 5.0 g
Tween 80 Merck nr 8.22187 1.0 g
K2HP04 Merck nr 105104 2.6 g
Na-acetate Merck nr 106267 5.0 g
Diammonium-hydrogen-citrate Merck nr 101154 2.0 g
MgS04, 7 H20 Merck nr 105882 0.2 g
MnS04, H20 Merck nr 105941 0.05 g
Agar SO-BI-GEL 13.0 g
The pH was adjusted after autoclaving to 6.9 ± 0.1 at 25°C.
The MRS-IM broth used in the below examples for liquid cultures had the following composition per litre H20 :
Tryptone Oxoid L 42 10.0 g
Yeast extract Oxoid L 21 5.0 g
Tween 80 Merck nr 8.22187 1.0 g
K2HP04 Merck nr 105104 2.6 g
Na-acetate Merck nr 106267 5.0 g
Diammonium-hydrogen-citrate Merck nr 101154 2.0 g
MgS04, 7 H20 Merck nr 105882 0.2 g
MnS04, H20 Merck nr 105941 0.05 g
The pH is adjusted after autoclaving to 6.9 ± 0.1 at 25°C. T e carbon sources, lactose 20g/l or glucose 20g/l, were first filtered sterile and then added to the au- toclaved broth. The above MRS-IM media can be varied to some extent without affecting the capability of the media to support growth of Lactobacillus delbrueckii subsp, bulgari- cus. Further, as will be understood by the skilled person, a MRS-IM concentrate or the various components described above may be obtained from different suppliers and used for the preparation of a MRS-IM medium. These media will likewise be used in the below examples, in particular in the 2-deoxyglucose resistance selection assay.
Mother strains
Streptococcus thermophilus CHCC11976 (galactose-fermenting strain with a mutation in the GalK gene and producing exopolysaccharides as described in WO 2011/026863).
Streptococcus thermophilus CHCC14994 (galactose-fermenting strain),
Lactobacillus delbrueckii subsp. bulgaricus CHCC759.
Lactobacillus delbrueckii subsp. bulgaricus CHCC10019.
2-deoxy-glucose resistant strains
Streptococcus thermophilus CHCC15757 (2-deoxyglucose resistant mutant of CHCC14994).
Streptococcus thermophilus CHCC15887 (2-deoxyglucose resistant mutant of CHCC11976).
Streptococcus thermophilus CHCC16404 (hyper- lactose fermenting and glucose secreting mutant of CHCC15757).
Lactobacillus delbrueckii subsp. bulgaricus CHCC16159 (2-deoxyglucose resistant mutant of CHCC759).
Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 (2-deoxyglucose resistant mutant of CHCC10019).
EXAMPLE 1 : Use of 2-deoxyglucose to isolate glucose kinase mutants of Streptococcus thermophilus with enhanced excretion of glucose.
In order to isolate mutants of Streptococcus thermophilus strain CHCC11976 and of Streptococcus thermophilus strain CHCC14994, cells derived from the growth of a single colony were inoculated into 10 ml of M17 broth containing 2% lactose and grown overnight at 40° C. Next day, the strains were plated in serial dilutions on M17 agar plates containing 2% galactose and a concentration of 2-deoxyglucose of either 20 mM
(CHCC14994) or 30 mM (CHCC11976) and incubated for 20 hours at 40°C. Resistant colonies were at first re-streaked on the same type of agar plates as they were selected. Survivors were used to inoculate fresh M17 broth containing either 2% lactose, 2% galactose or 2% glucose and growth was measured.
From this, a number of mutants that were able to grow faster on galactose than on glucose were identified as outlined in Example 2. Two such mutants were CHCC15757 and CHCC15887, which are derived from CHCC14994 and
CHCC11976 respectively.
EXAMPLE 2: 2-deoxyglucose resistance mutant growth pattern
To ensure the selection of 2-deoxyglucose resistant mutants that can grow on ga- lactose, two strains that were selected from a galactose-fermenting strain collection were used. While these galactose-fermenting strains still grow at least 10% faster in exponential phase in M17 broth+2% glucose than in M17 broth+2% galactose, the 2-deoxyglucose resistant mutant derivates of CHCC11976 and CHCC14994, such as CHCC15757 and CHCC15887, on the other hand, are charac- terized by growing faster in exponential phase in M1.7 broth+2% galactose than in M17 broth+2% glucose.
Growth in exponential phase is herein measured as the development in optical density of the exponentially growing culture at 600 nanometers (OD6oo) with time at 40°C.
As known by the skilled person, it may vary from species to species when the culture is in exponential growth. The skilled person will know how to determine the growth in exponential phase, e.g. between OD600 0.1-1.0.
The optical density (OD) of the culture is measured in a spectrophotometer. Conclusion:
Based on the 2-deoxyglucose resistance mutant growth pattern of this Example 2 - for a specific strain of interest (e.g. one from a relevant commercial product) - the skilled person can routinely test if this specific strain of interest has the herein relevant growth pattern which is a property of the selected mutants. EXAMPLE 3: Mutation analysis assay of the gene encoding glucose kinase.
Total DNA was isolated from the mutants identified in Example 1 to perform mutation analysis assay of the gene encoding glucose kinase. Sequencing of the glu- cose kinase gene revealed that the gene in CHCC15757 contains a non-conserved mutation in codon 141 gene rating an isoleucine instead of a threonine codon. Sequencing of the gene from mutant CHCC15887 revealed a mutation in codon 72 resulting in a non-conserved amino acid change from serine to proline (Figure 2) The 2-deoxyglucose resistant strains complying to the conditions specified in Examples 1 and 2 and isolated as described in Example 1 are characterized by having a mutation in the gene encoding glucose kinase (gicK). The mutation can result in an amino acid change of the encoded enzyme or result in generation of a stop codon which will truncate the encoded enzyme.
To reveal the mutation in the glcK gene, the specific strain of interest is grown in the liquid broth (M17) to which is added 2% lactose at 40°C over night. After isolation of the chromosomal DNA, the DNA was subjected to PGR analysis using two primers complementary to a conserved region just upstream and just downstream of the gene encoding glucose kinase. The sequences of the primers are:
GK1F: 5' CTT GGG TAA AAG GCT CTA TG 3' (SEQ ID NO. 3)
GK1R: 5' CGT TTT TCA ACA AAA AAG TGC TACC 3* (SEQ ID NO. 4) The conditions for the PGR reactions were as specified by the manufacturer of the PGR amplification kit (ROCHE) e.g.
2 ul Chromosomal DNA
1 μΙ Primer GK1F
1 μΙ Primer GK1R
25 μ I Master mix
21 μΙ H20
PCR-program : (94°C-1.5 rrin., 50°C-1 min., 72°C-1.5 min)x30
PGR amplification generates a 1168 bp fragment. After purification using a PGR purification kit from Biorad, the PGR fragment was submitted for DNA sequencing at Macrogen using the same two primers that were used for the amplification. After sequencing, the DNA sequence was compared to that of the mother strain.
EXAMPLE 4. Carbohydrate analysis of fermented milk.
In another experiment, the sugar concentrations of relevant sugar were determined in milk fermented with CHCC14994, CHCC11976, CHCC15757 and
CHCC15887, respectively. 9.5% B-milk was inoculated with 1% (106-107 CFU/ml) of a culture grown over night in M 17 broth to which is added 2% galactose. The acidification was followed with an INTAB PC logger and Easyview software. After 30 hours of acidification at 40°C milk samples were taken for HPLC analysis to obtain the content of relevant sugars and acids. The acidification curves showed that the mutants had a slightly delayed initiation of acidification but ended at a similar end pH. The HPLC data is presented in Table 1.
From Table 1 it is apparent that the two glcK mutant strains, CHCC15757 and CHCC15887, consume at least 71% of the lactose, while the mother strains consume approximately 28% of the lactose. For the most lactose fermenting mutant, CHCC15887, as little as 11.9 mg/ml remains in the fermented milk indicating a role for this product even for people with lactose intolerance. Very significantly, the two glcK mutants have excreted between 8.3 and 11.3 mg/ml of glucose while the glucose secretion of the mother strains is below detection level. At the same time both mutant strains also secrete more galactose than the mother strains: between 34 and 52%. Taking into account that sucrose is a 100 reference, and the sweetness of lactose is 16, the sweetness of galactose is 32 and the sweet¬ ness of glucose is 74.3, a calculation of the relative sweetness of the final fermented product suggests a sweetness 2.0 times sweeter when fermented with the best mutant CHCC15757 than with the corresponding mother strain CHCC14994.
Table 1 : HPLC data of milk samples.
Figure imgf000040_0001
Sweetness calculated : mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galac tose * 32.
As the two glcK mutant strains, CHCC15757 and CHCC15887, excrete high levels of glucose, it is contemplated that the mutations in the glcK gene inactivates the the encoded glucokinase protein.
EXAMPLE 5 : Selection of 2-cieoxyglucose resistant Lactobacillus delbrueckii subsp. bulgaricus strains
Selection of 2-deoxyglucose resistant mutants
Two Lactobacillus delbrueckii subsp. bulgaricus strains of interest, CHCC759 and CHCC10019, were independently from one another inoculated into 10 ml of the above-described MRS-IM broth containing 2% lactose and incubated anaerobically at 40°C over night. In the next step, samples of these cultures containing about 3 X 108 cells were plated on MRS-IM agar plates containing 2% lactose and fur- thermore containing 20 mM 2-deoxyglucose. Colonies arising on the plates were purified by single colony streaking on MRS-IM agar plates containing 2% lactose and furthermore containing 20 mM 2-deoxyglucose and further characterized as described below. 2-deoxyglucose resistance assay:
The following method is suitable for determining whether or not a strain of interest is resistant to 2-deoxyglucose. Strains of interest are inoculated into 10 ml of the above-described MRS-IM broth containing 2% lactose and incubated anaerobi- cally at 40°C over night In the next step, diluted samples of these cultures containing about 104-105 cells are plated on MRS-IM agar plates containing 2% lactose and furthermore containing the same 2-deoxyglucose concentration that was used for selection of the resistant mutant (typically 20 mM but other concentrations might be used). The agar plates are incubated under anaerobic conditions for 20 hours at 40°C and inspected, Lactobacillus delbrueckii subsp. bulgaricus strains which are not resistant to 2-deoxyglucose will produce few if any colonies whereas strains which are resistant to 2-deoxyglucose will produce a multitude of colonies. Appropriate controls include the Lactobacillus delbrueckii subsp, bulgaricus strains, CHCC759 and CHCC10019, which are sensitive to 2-deoxyglucose at a concentration of 20 mM and CHCC16159 and CHCC16160 which are resistant to 20 mM 2-deoxyglucose.
Result: Several clones that were capable of growing under the selective conditions in the presence of 2-dexyglucose were isolated by this approach. Mutant strains that showed a rapid growth on plates with 2-dexyglucose were designated
CHCC16159 (derived from mother strain CHCC759) and CHCC16160 (derived from mother strain CHCC10019). These mutant strains were deposited at the Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH.
EXAMPLE 6: Growth pattern of 2-deoxyglucose resistant mutants of Lactobacillus delbrueckii subsp. bulgaricus
To ensure that the 2-deoxyglucose resistant mutants of Lactobacillus delbrueckii subsp. bulgaricus have either lost the ability to grow on glucose or have an im¬ paired ability to grow on glucose as carbon source, the growth pattern of the mu¬ tants was compared to that of the mother strains by growing both the mother strains, CHCC759 and CHCC10019, and the mutants, CHCC16159 and
CHCC16160, in MRS-IM broth containing 2% glucose.
While the 2 mother strains, CHCC759 and CHCC10019, grew exponentially in MRS-IM broth added 2% glucose with a doubling time less than 10 hours, the two 2-deoxyglucose resistant mutants CHCC16159 and CHCC16160 did not grow or grew only very slowly in this medium. Growth in the exponential phase was monitored by measuring the optical density of the exponentially growing culture at 600 nanometers (ODeoo) at 40 °C in a spectrophotometer. The exponential phase of growth was reached between ODeoo 0.1- 1.0.
EXAMPLE 7: Carbohydrate analysis of milk fermented with strains of Lactobacillus delbrueckii subsp, bulgaricus.
In another experiment, the sugar concentrations of different sugars were determined in milk fermented with the Lactobacillus delbrueckii subsp. bulgaricus strains CHCC759, CHCC10019, CHCC16159, and CHCC16160, respectively. 9.5 % B-milk was inoculated with 1% (106-107 CFU/ml) of a liquid culture grown over night anaerobically in MRS-IM broth containing 2% lactose. The acidification was followed with an INTAB PC logger and the Easyview software. After 30 hours of acidification at 40°C, milk samples were taken for HPLC analysis to measure the amounts of various sugars and organic acids. The acidification curves showed that the mutants had a somewhat delayed initiation of acidification and ended at a slightly higher end pH. The HPLC data are presented in Table 2.
As can be seen from Table 2, the two 2-deoxyglucose resistant mutant strains, CHCC16159 and CHCC16160, consumed at least about 94 % of the lactose, while the mother strains consumed at least about 37 % of the lactose. For the mutant showing the highest production of lactic acid, CHCC16160, as little as 2.9 mg/ml lactose remained in the fermented milk. Fermented milk products with such low levels of lactose could be suitable for consumption by people with lactose intolerance. Significantly, the two mutant strains, CHCC16159 and CHCC16160, excreted between 15.2 and 15.8 mg/ml of glucose while the glucose secretion of the mother strains is below detection level for CHCC10019 and 4.2 mg/ml for CHCC759, respectively. At the same time both mutant strains also secreted more galactose than the mother strains. If the reference value for sweetness of sucrose is 100, and the sweetness of lactose is 16, the sweetness of galactose is 32 and the sweetness of glucose is 74, a calculation of the relative sweetness of the final fermented product suggests that the mutant CHCC16160 produces a fermented milk product that is 2.5 times sweeter than with the corresponding mother strain CHCC10019.
Table 2: HPLC data of milk samples.
Figure imgf000043_0001
tose * 32.
EXAMPLE 8: Selection of a hyper-lactose fermenting and glucose secreting mutant of Streptococcus thermophi!us
In order to isolate a hyper-lactose fermenting and glucose secreting mutant of Streptococcus thermophilus strain CHCC15757, cells derived from the growth of a single colony were inoculated into 10 ml of M17 broth containing 2% galactose and grown overnight at 40 °C.
Next day, the strain was plated in serial dilutions on M17 agar plates containing 2% galactose and a concentration of 2-deoxyglucose of 30 mM and incubated for 20 hours at 40°C. Resistant colonies were at first re-streaked on the same type of agar plates as they were selected. Survivors were used to inoculate fresh M17 broth containing either 2% lactose, 2% galactose, 2% sucrose or 2% glucose. From this, we were able to isolate a mutant, CHCC16404, derived from
CHCC15757, that was unable to grow in B-miik but able to grow in M17 added 2% sucrose at 40 °C. Furthermore, CHCC16404 was unable to grow in M 17 added 2% glucose.
Growth in exponential phase is herein measured as the development in optical density of the exponentially growing culture at 600 nanometers (OD600) with time at 40°C. EXAMPLE 9; Growth pattern of hyper-lactose fermenting and glucose secreting Streptococcus thermophilus mutant CHCC16404
To ensure maintenance and proper growth of mutant CHCC16404, the strain was grown at 40 °C in M17 added 2% sucrose. To our surprise, we observed that mutant strain CHCC16404 was able to acidify 9.5% B-milk only when the strain was inoculated with 1% (106-107 CFU/ml) of a culture grown over night in M17 broth added 2% sucrose or when the milk was added sucrose. We observed that addition of as little as 0.01 % sucrose to the milk enabled CHCC16404 to acidify 9.5% B-milk. Furthermore, CHCC16404 was unable to grow in M 17 added 2% glucose at 40°C as opposed to the mother strain CHCC15757 that can grow in M17 added glucose under the same conditions. Together these results indicated that the 2- deoxyglucose treatment of CHCC15757, that generated CHCC16404, has selected a mutation that inactivates the glucose uptake system disabling uptake of secret- ed glucose from the medium
EXAMPLE 10: Carbohydrate analysis of milk fermented with hyper-lactose fermenting and glucose secreting Streptococcus thermophilus mutant CHCC16404
In another experiment, the sugar concentrations of relevant sugars were determined in milk fermented with CHCC16404. Bottles containing 9.5% B-milk added 0.01%, 0.02%, 0.03% and 0.05% sucrose respectively were inoculated with 1% (106-107 CFU/ml) of a culture grown over night in M17 broth to which is added 2% sucrose. The acidification was followed with an INTAB PC logger and Easyview software. After 30 hours of acidification at 40°C, milk samples were taken for HPLC analysis to obtain the content of relevant sugars and acids.
From Table 3 it is apparent that the hyper-lactose fermenting and glucose secret- ing mutant CHCC16404, surprisingly, consumes all of the lactose at all concentrations of added sucrose tested in this experiment. We have also observed that when a higher sucrose concentration was added (e.g. > 0.1 mg/ml), the lactose fermentation is not completed before the final pH is reached. Furthermore Table 3 also shows that all the lactose is converted into glucose and galactose and that only part of the galactose is used for fermentation at all concentrations of added sucrose. Interestingly, the secreted glucose is not taken up again thereby leaving more than 23.9 mg/ml glucose in the milk. Since about 25% of the galactose is fermented more than 16 mg/ml of galactose remains in the milk after fermentation. These data indicate that CHCC16404, in addition to the glcK mutation inherited from the mother strain CHCC15757, also harbours a mutation that inactivates the glucose uptake system disabling uptake of secreted glucose from the medium, Comparison of the data in Table 3 with those in Table land taking into account that sucrose is a 100 reference, and the sweetness of lactose is 16, the sweetness of galactose is 32 and the sweetness of glucose is 74,3, a calculation of the relative sweetness of the final fermented product generates a sweetness about 3.5 times sweeter when fermented with CHCC16404 than with the strain CHCC14994.
Table 3; HPLC data of milk samples.
Figure imgf000045_0001
Sweetness calculated : mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galac¬ tose * 32.
EXAMPLE 11 : Carbohydrate analysis of milk fermented with a combination of strains of Streptococcus thermophilus and strains of Lactobacillus delbrueckii subsp. bulgaricus.
In this experiment, the concentrations of sugars and organic acids were determined in milk fermented with combinations of a Lactobacillus delbrueckii subsp. bulgaricus strain (selected from CHCC759, CHCC10019, CHCC16159 and CHCC16160) and a Streptococcus thermophilus strain which was either
CHCC14994, CHCC15757 or CHCC16404.
The production of yoghurt normally involves the use of a mixed starter culture containing both Lactobacillus delbrueckii subsp, bulgaricus and Streptococcus thermophilus strains. Typically, the milk substrate used in the production of yoghurt is inoculated with 1 part Lactobacillus delbrueckii subsp. bulgaricus and 9 parts Streptococcus thermophilus. In order to analyse glucose secretion capabilities in a standard setup for yoghurt production, 9,5% B-milk was inoculated with O. i % of a Lactobacillus delbrueckii subsp. bulgaricus culture grown over night anaerobically in HRS-IM broth containing 2% lactose and 0.9% of a Streptococcus thermophilus culture grown over night in M17 broth containing 2% galactose (CHCC15757) or 2% sucrose (CHCC16404). The acidification was followed with an INTAB PC logger and Easyview software. After 30 hours of acidification, milk sam- pies were taken for HPLC analysis to measure the amount of different sugars and acids. The HPLC data are presented in Table 4.
It can be taken from Table 4 that the use of the 2-deoxyglucose-resistant mutant strain CHCC15757 and CHCC16404 of Streptococcus thermophilus results in secretion of glucose into the milk irrespective of whether it is combined with a Lac- tobacillus delbrueckii subsp. bulgaricus mother strain or with a 2-deoxyglucose- resistant mutant thereof. However, glucose concentrations are higher when a combination of 2-deoxyglucose-resistant mutant strains of both species are used, e.g. a combination of CHCC15757 and CHCC16159, or a combination of
CHCC15757 and CHCC16150. When using these mixed cultures, at least 82% of the lactose was found to be consumed, and between 11.8 mg/ml and 14.1 mg/ml of glucose was found to be excreted. Similar results are obtained when the Streptococcus thermophilus strain is CHCC15887 which is also a 2-deoxyglucose resistant mutant with a mutation in the glcK gene. At the same time, the presence of a 2-deoxyg I ucose- resista nt mutant strain in the starter culture also resulted in excretion of more galactose. When a combination of mutant strains, e.g. CHCC15757 and CHCC16159 is used, galactose excretion is about 3 times higher ( 17.1 mg/ml) compared to a starter culture comprising the corresponding mother strains CHCC14994 and CHCC10019.
Glucose secretion is even more efficient when a combination of the hyper-lactose fermenting and glucose secreting Streptococcus thermophilus mutant CHCC16404 and the 2-deoxyglucose-resistant mutant strains of Lactobacillus delbrueckii subsp. buigaricus are used, e.g. a combination of CHCC16404 and CHCC16159, or a combination of CHCC164C4 and CHCC16160.
Taking into account that the sweetness of sucrose is a 100 (reference value), and the sweetness of lactose is 16, the sweetness of galactose is 32 and the sweetness of glucose is 74, a calculation of the relative sweetness of the final fermented product, presented in last row of Table 4, suggests that the different combination of strains enables the definition of the final concentration of residual lactose, glucose and galactose in the final fermented product. If a yoghurt with maximum inner sweetness due to high concentrations of secreted glucose and galactose and no residual lactose is desired then the most efficient combination of strains is CHCC16404 and CHCC16160. This combination provided a yoghurt that is 3.6 times more sweet that the corresponding combination of 2-DG sensitive strains of Streptococcus thermophilus and Lactobacillus delbrueckii subsp. buigaricus, CHCC14994 and CHCC10019 and has no detectable lactose left in the fermented milk.
Table 4; HPLC data of milk samples fermented with mixed cultures
Figure imgf000048_0001
* addition of 0.05 % sucrose
Sweetness calculated : mg/ml glucose *74 + mg/ml lactose *16 + mg/ml galactose * 32.
EXAMPLE 12. Improving the growth of Bifidobacteria by use of glucose secreting mutants of Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bul- garicus. Some of the most acknowledged probiotic bacteria like Bifidobacterium, animalis subsp. lactis BB-12® (commercially available from Chr. Hansen A/S, Hoersholm,
Denmark) do not grow well when present alone in lactose based medium like milk, In this experiment, we have therefore investigated the effect of combining Bifidobacterium animalis subsp, lactis BB-12® with a glucose secreting strain of Streptococcus thermophilus or Lactobacillus delbrueckii subsp. bulgaricus.
Experiment 1 ;
CHCC 5445 (BB-12®) was grown up at anaerobic conditions overnight at 40°C in MRS+0,05% cysteine chloride.
CHCC14994 was grown overnight at 40°C in M17 with 2% galactose.
CHCC 15757 was grown overnight at 40°C in M17 with 2% galactose.
Experiment 2:
CHCC 5445 (BB-12®) was grown up at anaerobic conditions overnight at 40°C in MRS+0,05% cysteine chloride.
CHCC10019 was grown overnight anaerobic at 40°C in MRS with 2% lactose
CHCC16159 was grown overnight anaerobic at 40°C in MRS with 2% lactose
Six bottles with 200 ml B-milk are inoculated at 40°C overnight with a total of 1% of the outgrown cultures having similar optical densities:
1% CHCC 5445 (BB-12®).
0.5% CHCC 5445 (B8- 12®) + 0.5 % CHCC14994
0.5% CHCC 5445 (B3-12®) + 0.5 % CHCC15757
1% CHCC 5445 (BB-12®).
0.5% CHCC 5445 (BB-12®) + 0.5 % CHCC10019
0.5% CHCC 5445 (BB-12®) + 0.5 % CHCC16159 Only bottles 2-3 and 5-6 acidified due to the poor performance of BB-12 in milk. After fermentation, 100 μΙ of each culture was plated out in different dilutions
(10"s, 10"6, 10"7, 10"8) on agar plates selecting for growth of BB-12® specifical¬ ly i.e. MRS + 0.05% cystein chloride + tetracycline added 10 ug/ml of tetracycline and then incubated anaerobic overnight at 40°C. The number of colonies was subsequently determined by counting and an average of the results is given in Table 5 as CFU/ml (colony forming units per milliliter). Table 5. CFU/ml of BB-12 in fermented milk cultures
Figure imgf000050_0001
Only when the glucose secreting mutants of Streptococcus thermophilus,
CHCC15757 and Lactobacillus delbrueckii subsp. bulgaricus , CHCC16159 is present together with BB-12®, the growth of BB- 12® is boosted and the total cell count presented as CFU/ml is approximately 10 x (1 log) higher in these cultures. This result suggests that glucose secreting strains can be used to boost the content of probiotic strains like BB-12® when mixed together In cultures.
EXAMPLE 13. Genome comparison of CHCC15757 and CHCC16404 and identification of a mutation in the manM gene encoding the IIC""" protein of the glucose /mannose phosphotransferase system (PTS).
Genomic DNA preparations of CHCC15757 and CHCC16404 were sequenced at Beijing Genomics Institute (BGI, Beijing, China) and assembled and finished using CLC genomic workbench software (CLCBio, Arhus, Denmark). The genome sequences of CHCC15757 and CHCC16404 were aligned using the annotated ge- nome sequence of CHRZ1066 as a reference using Mauve 2.3.1 software. After alignment, a single-nucleotide polymorphism (SNP) analysis was performed using the free Mauve 2.3.1 software on both CHCC15757 and CHCC16404. This allowed the identification of a G to T mutation in the GAA cod on (glutamic acid) at amino acid position 209 in the manM gene encoding the IICMan protein of the glu- cose/mannose PTS. This change introduced a TAA stop cod on at position 209 of the protein (Figure 3) resulting in the production of a truncated, and therefore, nonfunctional IICMan protein. Therefore, it is contemplated that this mutation results in prevention of the transport of glucose into the cell via the glucose /mannose PTS. DEPOSITS AND EXPERT SOLUTIONS
The applicant requests that a sample of the deposited micro-organisms stated below may only be made available to an expert, until the date on which the patent is granted.
The strain Streptococcus thermophilus CHCC15757 has been deposited at
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhof- fenstr. 7B, D-38124 Braunschweig, Germany, on 3 April 2012 under the accession No. DSM 25850
The strain Streptococcus thermophilus CHCC1.5887 has been deposited at
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhof- fenstr. 7B, D-38124 Braunschweig, Germany, on 3 April 2012 under the accession No. DSM 25851
The strain Streptococcus thermophilus CHCC 16404 has been deposited at
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhof- fenstr. 7B, D-38124 Braunschweig, Germany, on 12 December 2012 under the accession No. DSM 26722.
The strain Streptococcus thermophilus CHCC14994 has been deposited at
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhof- fenstr. 7B, D-38124 Braunschweig, Germany, on 3 April 2012 under the accession No. DSM 25838.
The strain Streptococcus thermophilus CHCC11976 has been deposited at
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhof- fenstr. 7B, D-38124 Braunschweig, Germany, on 8 September 2009 under the ac- cession No. DSM 22934.
The strain Lactobacillus delbrueckii subsp. bulgaricus CHCC759 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No. DSM 26419. The strain Lactobacillus delbrueckii subsp, bulgaricus CHCC10019 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ)
GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 3 April 2007 under the accession No. DSM 19252.
The strain Lactobacillus delbrueckii subsp. bulgaricus CHCC16159 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr, 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No, DSM 26420.
The strain Lactobacillus delbrueckii subsp. bulgaricus CHCC16160 has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 6 September 2012 under the accession No. DSM 26421.
The strain Bifidobacterium animalis subsp. lactis CHCC5445 (BB-12®) has been deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ) GmbH, Inhoffenstr. 7B, D-38124 Braunschweig, Germany, on 30 September 2003 under the accession No. DSM 15954
The deposits were made according to the Budapest treaty on the international recognition of the deposit of microorganisms for the purposes of patent procedure.
REFERENCES
WO 2011/026863
Pool et al, (2006) Metabolic Engineering 8(5); 456-464
Thompson et al, (1985) J. Bacteriol. 162(1); 217-223
Chervaux et al. (2000). Appl and Environ Microbiol, 66, 5306-5311
Cochu et al. (2003). Appl and Environ Microbiol, 69(9), 5423-5432
H0ier et al. (2010) in The Technology of Cheesemaking, 2nd Ed. Blackwell Publishing, Oxford ; 166-192.

Claims

1. A ga lactose-fermenting Streptococcus thermophiius strain, wherein the strain carries a mutation in the DNA sequence of the glcK gene encoding a gluco- kinase protein, wherein the mutation inactivates the glucokinase protein or has a negative effect on expression of the gene,
2. The Streptococcus thermophilus strain according to claim 1, wherein the strain carries a mutation that reduces the transport of glucose into the cell,
3. The Streptococcus thermophiius strain according to claim 2, wherein the strain carries a mutation in a gene encoding a component of a glucose transporter, wherein the mutation inactivates the glucose transporter or has a negative effect on expression of the gene,
4. The Streptococcus thermophiius strain according to claim 3, wherein the strain carries a mutation in the DNA sequence of the mariM gene encoding the IlCMan protein of the glucose/mannose phosphotransferase system, wherein the mutation inactivates the IICM3n protein or has a negative effect on expression of the gene.
5. The Streptococcus thermophilus strain according to any of the preceding claims, wherein the strain increases the amount of glucose in 9.5% B-milk to at least 5 mg/ml when inoculated into the 9.5% B-milk at a concentration of 106-107 CFU/m! and grown at 40°C for 20 hours,
6. The Streptococcus thermophiius strain according to any of the preceding claims, wherein the strain increases the amount of glucose in 9,5% B-milk with 0.05% sucrose to at least 5 mg/ml when inoculated into the 9.5% B-milk with 0.05% sucrose at a concentration of 106-107 CFU/ml and grown at 40°C for 20 hours,
7. A Streptococcus thermophiius strain, wherein the strain is selected from the group consisting of the Streptococcus thermophiius CHCC15757 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No, DSM 25850, the Streptococcus thermophiius CHCC15887 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 25851, the Streptococcus thermophiius CHCC16404 strain that was deposited at Deutsche Sammlung von Mikroorganismen und
Zellkulturen under accession No. DSM 26722, and a mutant strain derived therefrom, wherein the mutant strain is obtained by using one of the deposited strains as starting material, and wherein the mutant has retained or further Improved the lactose fermenting property and/or the glucose secreting property of said deposited strain,
8. A Lactobacillus delbrueckii subsp. bulgaricus strain, wherein the strain Is resistant to 2-deoxyglucose and wherein the strain increases the amount of glu- cose in 9,5% B-mi!k to at least 5 mg/ml when inoculated into the 9.5% B-milk at a concentration of 106-107 CFU/ml and grown at 40°C for at least 20 hours.
9. A Lactobacillus delbrueckii subsp. bulgaricus strain, wherein the strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgari- cus strain CHCC16159 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26420, the Lactobacillus delbrueckii subsp. bulgaricus strain CHCC16160 that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26421, and a mutant strain derived therefrom, wherein the mutant strain is ob- tained by using one of the deposited strains as starting material, and wherein the mutant has retained or further improved the lactose fermenting property and/or the glucose secreting property of said deposited strain.
10. A composition compr ising from 104 to 1012 CFU/g of a Streptococcus ther- mophilus strain according to any of claims 1 to 7.
11. The composition of claim 10, wherein the Streptococcus thermophilus strain is unable to acidify the 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% B-milk is inoculated with 106-107 CFU/ml of the Strep- tococcus thermophilus strain and incubated for 14 hours at 40°C, and wherein the composition further comprises an amount of sucrose effective to trigger acidifica¬ tion of the 9.5% B-milk, defined as resulting in a pH decrease of 1.0 or more when 9.5% B-milk is inoculated with 106-107 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C.
12. The composition of claims 10 or 11 further comprising from 104 to 1012
CFU/g of a Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9.
13. A method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to any ore of claims 1 to 7.
14. A method according to claim 13, wherein the Streptococcus thermophilus strain is unable to acidify 9.5% B-milk, defined as resulting in a pH decrease of less than 1.0 when 9.5% 3-milk is inoculated with 106-107 CFU/mi of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C, and wherein the milk substrate is added an amount of sucrose effective of triggering acidification of the B-milk, defined as resulting in a pH decrease of 1.0 or more when 9,5% B- milk is inoculated with 10 -107 CFU/ml of the Streptococcus thermophilus strain and incubated for 14 hours at 40°C.
15. A method for producing a fermented milk product comprising inoculating and fermenting a milk substrate with at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9.
16. A method according to any one of claims 13 to 15 comprising inoculating and fermenting a milk substrate with at least one Streptococcus thermophilus strain according to any one of claims 1 to 7 and at least one Lactobacillus del- brueckii subsp. bulgaricus strain according to claims 8 or 9.
17. A fermented milk product comprising at least one Streptococcus thermophilus strain according to any one of claims 1 to 7.
18. A fermented milk product comprising at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9.
19. A fermented milk product according to claim 17 or 18 comprising at least one Streptococcus thermophilus strain according to any one of claims 1 to 7 and at least one Lactobacillus delbrueckii subsp. bulgaricus strain according to claims
8 or 9.
20. Use of a Streptococcus thermophilus strain according to any one of claims 1 to 7 and a Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9 for the preparation of a fermented milk product.
21. Use of a Streptococcus thermophilus strain according to any one of claims 1 to 7 and a Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9 for increasing the sweetness of a fermented milk product.
22. Use of a Streptococcus thermophilus strain according to any one of claims 1 to 7 and a Lactobacillus delbrueckii subsp. bulgaricus strain according to claims
8 or 9 for decreasing the lactose content in a fermented milk product.
23. A fermented milk product according to any one of claims 17 to 19 for use in avoiding symptoms of lactose intolerance.
24. Use of a Streptococcus thermophilus strain according to any one of claims 1 to 7 for improving the growth of a Bifidobacterium strain.
25. Use of a Lactobacillus delbrueckii subsp. bulgaricus strain according to claims 8 or 9 for improving the growth of a Bifidobacterium strain.
26. A method for screening and isolating a non-GMO Streptococcus thermophilus strain-according to any one of claims 1 to 7, wherein the method comprises the following steps:
a) providing a g a lactose-fermenting Streptococcus thermophilus mother strain; b) selecting and isolating from a pool of Streptococcus thermophilus strains derived from the mother strain a pool of Streptococcus thermophilus strains which are resistant to 2-deoxyglucose; and
c) selecting and isolating from the pool of Streptococcus thermophilus strains which are resistant to 2-deoxyglucose a Streptococcus thermophilus strain if the growth rate of the Streptococcus thermophilus strain is higher in M 17 medi- um+2% galactose than in M17 medium+2% glucose.
27. A method according to claim 26 further comprising a step d) selecting and isolating from a pool of 2-deoxyglucose resistant Streptococcus thermophilus strains derived from the Streptococcus thermophilus strain selected in step c) a Streptococcus thermophilus strain if the growth rate of the Streptococcus ther- mophilus strain is high in M17 medium +2% sucrose but zero or at least 0-50% reduced compared to the growth rate of the mother strain in M17 medium+2% glucose.
28. The method according to claims 26 or 27, wherein the galactose- fermenting mother strain is selected from the group consisting of the Streptococcus thermophilus CHCC14994 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession no. DSM 25838, the Streptococcus thermophilus CHCC11976 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession no. DSM 22934, and strains derived therefrom.
29. A method for screen. ng and isolating a strain of Lactobacillus delbrueckii subsp. bulgaricus strain wherein the method comprises the following steps:
a) providing a Lactobacillus delbrueckii subsp. bulgaricus mother strain;
b) selecting and isolating from a pool of mutant Lactobacillus delbrueckii subsp. bulgaricus strains derived from the mother strain a pool of Lactobacillus delbrueckii subsp. bulgaricus strains which are resistant to 2-deoxyglucose; and c) selecting and isolating from the pool of Lactobacillus delbrueckii subsp. bulgari- cus strains which are resistant to 2-deoxyglucose a Lactobacillus delbrueckii subsp. bulgaricus strain if the growth rate of the Lactobacillus delbrueckii subsp. bulgaricus strain is higher in MRS-IM medium+2% lactose than in MRS-IM medium+2% glucose.
30. A method according to claim 29, wherein the mother strain is selected from the group consisting of the Lactobacillus delbrueckii subsp. bulgaricus CHCC759 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 26419, the Lactobacillus delbrueckii subsp. bulgaricus CHCC10C19 strain that was deposited at Deutsche Sammlung von Mikroorganismen und Zellkulturen under accession No. DSM 19252, and strains derived therefrom.
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