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WO2010111344A3 - Methods and microorganisms for production of c4-dicarboxylic acids - Google Patents

Methods and microorganisms for production of c4-dicarboxylic acids Download PDF

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Publication number
WO2010111344A3
WO2010111344A3 PCT/US2010/028429 US2010028429W WO2010111344A3 WO 2010111344 A3 WO2010111344 A3 WO 2010111344A3 US 2010028429 W US2010028429 W US 2010028429W WO 2010111344 A3 WO2010111344 A3 WO 2010111344A3
Authority
WO
WIPO (PCT)
Prior art keywords
microorganisms
production
methods
dicarboxylic acids
pyruvate
Prior art date
Application number
PCT/US2010/028429
Other languages
French (fr)
Other versions
WO2010111344A2 (en
Inventor
Adam Lawrence
Jacobus Thomas Pronk
Antonius Jeroen Adriaan Van Maris
Rintze Meindert Zelle
Kevin T. Madden
Jacob C. Harrison
Joshua Trueheart
Carlos Gancedo Rodriguez
Carmen-Lisset Flores Mauriz
Stanley Bower
Original Assignee
Microbia, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Microbia, Inc. filed Critical Microbia, Inc.
Publication of WO2010111344A2 publication Critical patent/WO2010111344A2/en
Publication of WO2010111344A3 publication Critical patent/WO2010111344A3/en
Priority to IL215376A priority Critical patent/IL215376A0/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1205Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/37Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi
    • C07K14/38Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi from Aspergillus
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/37Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi
    • C07K14/39Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi from yeasts
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0006Oxidoreductases (1.) acting on CH-OH groups as donors (1.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/88Lyases (4.)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P7/00Preparation of oxygen-containing organic compounds
    • C12P7/40Preparation of oxygen-containing organic compounds containing a carboxyl group including Peroxycarboxylic acids
    • C12P7/44Polycarboxylic acids
    • C12P7/46Dicarboxylic acids having four or less carbon atoms, e.g. fumaric acid, maleic acid
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y101/00Oxidoreductases acting on the CH-OH group of donors (1.1)
    • C12Y101/01Oxidoreductases acting on the CH-OH group of donors (1.1) with NAD+ or NADP+ as acceptor (1.1.1)
    • C12Y101/01037Malate dehydrogenase (1.1.1.37)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/01Phosphotransferases with an alcohol group as acceptor (2.7.1)
    • C12Y207/0104Pyruvate kinase (2.7.1.40)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y401/00Carbon-carbon lyases (4.1)
    • C12Y401/01Carboxy-lyases (4.1.1)
    • C12Y401/01001Pyruvate decarboxylase (4.1.1.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y401/00Carbon-carbon lyases (4.1)
    • C12Y401/01Carboxy-lyases (4.1.1)
    • C12Y401/01031Phosphoenolpyruvate carboxylase (4.1.1.31)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y401/00Carbon-carbon lyases (4.1)
    • C12Y401/01Carboxy-lyases (4.1.1)
    • C12Y401/01032Phosphoenolpyruvate carboxykinase (GTP) (4.1.1.32)

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Biotechnology (AREA)
  • Mycology (AREA)
  • Biomedical Technology (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Biophysics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)

Abstract

Methods and recombinant microorganisms for the biological production of C4-dicarboxylic acids are described. The recombinant microorganisms have increased production of OAA as compared to unmodified microorganisms. In some cases, the recombinant microorganisms have been modified to reduce production of pyruvate and/or reduce conversion of pyruvate to acetaldehyde. Thus, the microorganisms are modified to reduce the activity of pyruvate kinase and/or pyruvate decarboxylase.
PCT/US2010/028429 2009-03-24 2010-03-24 Methods and microorganisms for production of c4-dicarboxylic acids WO2010111344A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
IL215376A IL215376A0 (en) 2009-03-24 2011-09-25 Methods and microorganisms for production of c4-dicarboxylic acids

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US16301909P 2009-03-24 2009-03-24
US61/163,019 2009-03-24

Publications (2)

Publication Number Publication Date
WO2010111344A2 WO2010111344A2 (en) 2010-09-30
WO2010111344A3 true WO2010111344A3 (en) 2011-07-21

Family

ID=42781834

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2010/028429 WO2010111344A2 (en) 2009-03-24 2010-03-24 Methods and microorganisms for production of c4-dicarboxylic acids

Country Status (2)

Country Link
IL (1) IL215376A0 (en)
WO (1) WO2010111344A2 (en)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
MX2012002532A (en) * 2009-09-01 2012-04-11 Novozymes Inc Methods for improving malic acid production in filamentous fungi.
BR112012027464A2 (en) 2010-06-04 2019-09-24 Novozymes Inc host cell, method for producing a c4 dicarboxylic acid, and method for increasing the production of c4 dicarboxylic acid.
WO2011163270A1 (en) 2010-06-21 2011-12-29 Novozymes, Inc. Methods for improved c4-dicarboxylic acid production in filamentous fungi
DK2769985T3 (en) 2010-06-21 2018-01-29 Novozymes Inc Polypeptides from Aspergillus aculeatus with C4 dicarboxylic acid transporter activity and polynucleotides encoding the same
WO2012031079A2 (en) * 2010-09-01 2012-03-08 University Of Florida Research Foundation, Inc. L-malate production by metabolically engineered escherichia coli
CN103492551A (en) * 2011-02-28 2014-01-01 诺维信股份有限公司 Microorganism for c4-dicarboxylic acid production
EP2495317A1 (en) * 2011-03-01 2012-09-05 Technische Universität Hamburg-Harburg Modified phosphoenolpyruvate carboxylase from Corynebacterium glutamicum and uses thereof
EP2744904B1 (en) 2011-08-19 2016-04-13 Novozymes, Inc. Recombinant microorganisms for production c4-dicarboxylic acids
WO2013158749A2 (en) * 2012-04-17 2013-10-24 Gevo, Inc. Engineered microorganisms with improved growth properties
KR101426441B1 (en) 2012-05-16 2014-08-05 인하대학교 산학협력단 Recombinant microorganism expressing carbonic anhydrase from Dunaliella sp and phosphoenolpyruvate carboxylase from P.tricornutum CCMP 637, and method for producing organic acid using the same
EP3080251B1 (en) * 2013-12-12 2020-03-04 DSM IP Assets B.V. Fumarate reductases
US10590442B2 (en) 2016-06-29 2020-03-17 Kao Corporation Method for producing C4 dicarboxylic acid
JP2020526229A (en) * 2017-06-30 2020-08-31 ジミテック,インコーポレーテッド Microorganisms engineered to improve the use of oligosaccharides
WO2021076782A1 (en) * 2019-10-15 2021-04-22 Donald Danforth Plant Science Center Methods and compositions for improving agronomic characteristics of c4 plants
CN113846024B (en) * 2021-12-01 2022-03-29 南京昊禾生物科技有限公司 Method for reducing byproduct fumaric acid in L-malic acid fermentation process, strain and application

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2009011974A1 (en) * 2007-05-18 2009-01-22 Microbia Precision Engineering, Inc. Organic acid production by fungal cells

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2009011974A1 (en) * 2007-05-18 2009-01-22 Microbia Precision Engineering, Inc. Organic acid production by fungal cells

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
CHRISTIAN RIEDEL ET AL: "Characterization of the Phosphoenolpyruvate Carboxykinase Gene from Corynebacterium glutamicum and Significance of the Enzyme for Growth and Amino Acid Production", J. MOL. MICROBIOL. BIOTECHNOL., vol. 3, no. 4, 2001, pages 573 - 583 *
HUI WU ET AL: "Improved Succinic Acid Production in the Anaerobic Culture of an Escherichia coli pflB IdhA Double Mutant as a Result of Enhanced Anaplerotic Activities in the Preceding Aerobic Culture", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 73, no. 24, 2007, pages 7837 - 7843 *
HYOHAK SONG ET AL: "Production of succinic acid by bacterial fermentation", ENZYME AND MICROBIAL TECHNOLOGY, vol. 39, no. ISS.3, 2006, pages 352 - 361 *
SANG JUN LEE ET AL: "Genome-Based Metabolic Engineering of Mannheimia succiniciproducens for Succinic Acid Production", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 72, no. 3, 2006, pages 1939 - 1948 *

Also Published As

Publication number Publication date
WO2010111344A2 (en) 2010-09-30
IL215376A0 (en) 2011-12-29

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