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WO2007088478A1 - Indazole oxazolidinones as antibacterial agents - Google Patents

Indazole oxazolidinones as antibacterial agents Download PDF

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Publication number
WO2007088478A1
WO2007088478A1 PCT/IB2007/000259 IB2007000259W WO2007088478A1 WO 2007088478 A1 WO2007088478 A1 WO 2007088478A1 IB 2007000259 W IB2007000259 W IB 2007000259W WO 2007088478 A1 WO2007088478 A1 WO 2007088478A1
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WO
WIPO (PCT)
Prior art keywords
methyl
indazol
compound
alkyl
butyl
Prior art date
Application number
PCT/IB2007/000259
Other languages
French (fr)
Inventor
Mikhail Fedorovich Gordeev
Vara Prasad Venkata Nagendra Josyula
Gary Wayne Luehr
Original Assignee
Pfizer Products Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Pfizer Products Inc. filed Critical Pfizer Products Inc.
Publication of WO2007088478A1 publication Critical patent/WO2007088478A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D413/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
    • C07D413/14Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D413/00Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
    • C07D413/02Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings
    • C07D413/04Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring-member bond

Definitions

  • the present invention relates to novel derivatives of indazole oxazolidinones, pharmaceutical compositions thereof, methods for their use, and methods for preparing the isoxazol oxazolidinone derivatives. These compounds have potent activities against gram- positive bacteria.
  • Antibacterial resistance is a global clinical and public health problem that has emerged with alarming rapidity in recent years and undoubtedly will increase in the near future. Resistance is a problem in the community as well as in health care settings, where transmission of bacteria is greatly amplified. Because multiple drug resistance is a growing problem, physicians are now confronted with infections for which there is no effective therapy. As result, structurally novel antibacterials with a new mode of action have become increasingly important in the treatment of bacterial infections.
  • oxazolidinone compounds are the most recent synthetic class of antimicrobials.
  • This invention provides novel indazole oxazolidinone derivatives, which are active against a number of human and veterinary pathogens, including multiple resistant strains of bacteria.
  • U.S. Patent 5,182,403; U.S. Patent 6,239,152 discloses; U.S. Patent 5,164,510; WO 1996/38444; and WO 2004/074282 disclose oxazolidinones as antibacterial agents.
  • Y is H, or CF;
  • R 1 is (a) H, (b) Ci- 6 alkyl, or
  • the present invention also provides: a pharmaceutical composition which comprises a pharmaceutically acceptable carrier and an effective amount of a compound of formula I, a method for treating gram-positive microbial infections in a mammal by administering to the subject in need a therapeutically effective amount of a compound of formula I or a pharmaceutically acceptable salt thereof, and a use of a compound of formula I or a pharmaceutically acceptable salt thereof to prepare a medicament for treating gram-positive microbial infections.
  • the invention may also provide novel intermediates and novel processes that are useful for preparing compounds of formula I.
  • the carbon atom content of various hydrocarbon-containing moieties is indicated by a prefix designating the minimum and maximum number of carbon atoms in the moiety, i.e., the prefix Q. j indicates a moiety of the integer "i" to the integer "j" carbon atoms, inclusive.
  • Ci -7 alkyl refers to alkyl of one to seven carbon atoms, inclusive.
  • alkyl, alkenyl or alkynyl refer to both straight and branched groups, but reference to an individual radical such as "propyl” embraces only the straight chain radical, a branched chain isomer such as "isopropyl” being specifically referred to.
  • C 3-7 cycloalkyl refers to a cyclic saturated monovalent hydrocarbon group of three to seven carbon atoms, e.g., cyclopropyl, cyclohexyl, and the like.
  • halo refers to fluoro (F), chloro (Cl), bromo (Br), or iodo (I).
  • hetero is a five- (5) or six- (6) membered heterocyclic ring having 1-4 heteroatoms selected from the group consisting of oxygen, sulfur, and nitrogen within the ring.
  • An examples of het includes, but are not limited to, pyrrole, imidazole, pyrazole, 1,2,3- triazole, 1,3,4-triazole, oxazole, thiazole, isoxazole, isothiazole, 1,3,4-oxadiazole, 1,3,4- thiadiazole, 1,2,3-thiadiazole, tetrazole, pyridine, pyrazine, pyrimidine, pyridazine, indolizine, isoindole, indole, dihydroindole, indazole, purine, quinolizine, isoquinoline, quinoline, phthalazine, quinoxaline, quinazoline, cinnoline, pteridine, carbazole, carboline, phenanthridine, acridine, phenanthroline, isothiazole, phenazine, isoxazole, isoxazolin
  • het includes, but are not limited to, pyridine, thiophene, furan, pyrazole, pyrimidine, 2-pyridyl, 3-pyridyl, 4-pyridyl, 2-pyrimidinyl, 4- pyrimidinyl, 5-pyrimidinyl, 3-pyridazinyl, 4-pyridazinyl, 3-pyrazinyl, 4-oxo-2-imidazolyl, 2- imidazolyl, 4-imidazolyl, 3-isoxaz-olyl, 4-is-oxaz-olyl, 5-isoxaz-olyl, 3-pyrazolyl, 4- pyrazolyl, 5-pyrazolyl, 2-oxazolyl, 4-oxazolyl, 4-oxo-2-oxazolyl, 5-oxazolyl, 1,2,3- oxathiazole, 1 ,2,3-oxadiazole, 1,2,4-oxadiazole, 1,2,5-
  • pharmaceutically acceptable carrier means a carrier that is useful in preparing a pharmaceutical composition that is generally safe, non-toxic and neither biologically nor otherwise undesirable, and includes a carrier that is acceptable for veterinary use as well as human pharmaceutical use.
  • a pharmaceutically acceptable carrier as used in the specification and claims includes both one and more than one such carrier.
  • mammal refers to human or warm-blooded animals including livestock and companion animals.
  • Livestock refers to animals suitable for human meat consumption. Examples include pigs, cattle, chickens, fish, turkeys, rabbits, etc.
  • Companion animals refer to animals kept as pets such as dogs, cats, etc.
  • treating means that the subsequently described event or circumstance may, but need not, occur, and that the description includes instances where the event or circumstance occurs and instances in which it does not.
  • treating or “treatment” of a disease includes: (1) preventing the disease, i.e. causing the clinical symptoms of the disease not to develop in a mammal that may be exposed to or predisposed to the disease but does not yet experience or display symptoms of the disease; (2) inhibiting the disease, i.e., arresting or reducing the development of the disease or its clinical symptoms; or (3) relieving the disease, i.e., causing regression of the disease or its clinical symptoms.
  • terapéuticaally effective amount means the amount of a compound that, when administered to a mammal for treating a disease, is sufficient to effect such treatment for the disease.
  • the “therapeutically effective amount” will vary depending on the compound, the disease and its severity and the age, weight, etc., of the mammal to be treated.
  • prodrug refers to compounds that are rapidly transformed in vivo to yield the parent compound of the above formulas, for example, by hydrolysis in blood. A thorough discussion is provided in T. Higuchi and V. Stella, "Pro-drugs as Novel Delivery Systems," Vol. 14 of the A.C.S. Symposium Series, and in Bioreversible Carriers in Drug Design, ed. Edward B. Roche, American Pharmaceutical Association and Pergamon Press, 1987.
  • leaving group has the meaning conventionally associated with it in synthetic organic chemistry i.e., an atom or group capable of being displaced by a nucleophile and includes halogen, alkylsulfonyloxy, ester, or amino such as chloro, bromo, iodo, mesyloxy, tosyloxy, trifluofosulfonyloxy, methoxy, N,O-dimethylhydroxyl-amino, and the like.
  • isomers Isomers that differ in the arrangement of their atoms in space are termed "stereoisomers”.
  • the compounds of the present invention are generally named according to the IUPAC or CAS nomenclature system. Abbreviations which are well known to one of ordinary skill in the art may be used (e.g. "Ph” for phenyl, “Me” for methyl, “Et” for ethyl, “h” for an hour or hours and “it” for room temperature). Specific and preferred values listed below for radicals, substituents, and ranges, are for illustration only; they do not exclude other defined values or other values within defined ranges for the radicals and substituents.
  • alkyl denotes both straight and branched groups; but reference to an individual radical such as "propyl” embraces only the straight chain radical, a branched chain isomer such as "isopropyl” being specifically referred to.
  • alkyl is methyl, ethyl, propyl, isopropyl, butyl, iso-butyl, sec-butyl, and their isomeric forms thereof.
  • cycloalkyl is cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and their isomeric forms thereof.
  • halo is fluoro (F), chloro (Cl).
  • Y is H.
  • R 1 is C ⁇ alkyl, optionally substituted with one, two or three fluoro (F), or chloro (Cl). Specifically, R 1 is H, CH 3 , or CH 2 CH 3 .
  • W is CH 2 het.
  • W is 1,2,3-triazole-l-yl methyl.
  • V is an oxygen atom (O).
  • X is H.
  • X is methyl, ethyl, propyl, isopropyl, butyl, iso-butyl, or sec-butyl.
  • R 2 is H, or C ]-4 alkyl.
  • Examples of the present invention include:
  • the compounds of the present invention may be prepared according to Scheme I.
  • the substituted 5-amino-indazole (1) is reacted with an alkyl (2i?)-epoxypropanoate and a Lewis acid such as lithium triflate as described in US Patent 6,919,329.
  • the resulting amino alcohol (2) can then be ring closed to give the aryl oxazolidinones (3) following conditions as described in Scheme 3?.
  • Subsequent treatment of oxazolidinone ester (3) with ammonia or optionally substituted amines (R 1 NH 2 ) in a suitable solvent such as methanol or acetonitrile affords amides (4) (R 1 is H or optionally substituted alkyl).
  • treatment of ester (3) with 0-alkylhydoxylamines or hydrazines provides the hydroxamate (R 1 Is Oalkyl).
  • the starting material (5) can be prepared according to the procedure described in US patent No. 5,182,403. SCHEME m
  • triazole indazole oxazolidinones can be prepared according to Scheme III following the sequence of chemical transformations described by Brickner (J. Med. Chem., 1996, 39, 673-679).
  • R' Me, Cl, F, -CH 2 OH, -NO 2 , -CN, -C ⁇ CH, -NH 2 , etc.
  • R' Me, Cl, F, -CH 2 OH, -NO 2 , -CN, -C ⁇ CH, -NH 2 , etc.
  • hydroxymethyl indazole derivatives can be prepared according to the proceduer described by Brickner, J. Med. Chem., 1996, 39, 673-679) can be further converted to heteroaryl amine analogs using chemistry described by Perova et al. in Zh. Org. Khim. 1994, vol. 30, pp.1660-1663 and the methods described in PCT publication WO 9964417.
  • the hydroxymethyl indazole (8) is coupled with an appropriate amino- isoxazole or hydroxy-isoxazole, for example 3-(2,2,2-trichloroethoxycarbonyl- amino)isoxazole (may be prepared as described in PCT publication WO 0021960) or 3- hydroxyisoxazole (may be prepared as described in US Patent 3,687,968).
  • an appropriate amino- isoxazole or hydroxy-isoxazole for example 3-(2,2,2-trichloroethoxycarbonyl- amino)isoxazole (may be prepared as described in PCT publication WO 0021960) or 3- hydroxyisoxazole (may be prepared as described in US Patent 3,687,968).
  • a suitable coupling reagent such as diisopropylazo-dicarboxylate (DIAD).
  • the coupling reaction is typically conducted in a polar aprotic solvent, such as dimethylformamide, acetonitrile, tetrahydrofuran, or mixtures thereof, in the presence of organic base, such as triphenylphosphine.
  • a polar aprotic solvent such as dimethylformamide, acetonitrile, tetrahydrofuran, or mixtures thereof
  • organic base such as triphenylphosphine.
  • the process is typically carried out at about 0 to about 50 0 C.
  • the resulting carbamic acid intermediate can then be reduced to the heteroaryl amine (9).
  • the requisite l-alkyl-5-nitro-lH-indazole (1) starting material is most conveniently prepared via alkylation of an appropriately known substituted 5-nitro-lH- indazole (10) with an alkylating agent such as an alkyl halide or tosylate in the presence of an inorganic or organic base such as potassium hydroxide, sodium hydride, lithium bis(trimethylsilylamide), l,8-diazabicyclo[5.4.0]undec-7-ene, or sodium methoxide in a suitable solvent such as methanol, dimethylformarnide or dimethyl sulfoxide leading to a mixture of 1 -alkyl- IH- and 2-alkyl-2H-indazoles which are readily separated by chromatography or selective crystallization.
  • an alkylating agent such as an alkyl halide or tosylate
  • an inorganic or organic base such as potassium hydroxide, sodium hydride, lithium bis(trimethylsilylamide), l,
  • the ratio of 1 -alkyl- IH- and 2-alkyl-2H- indazole products is influenced by a variety of factors including the choice of alkylating agent, the acidity or basicity of the reaction media, protic or aprotic solvents, as well as steric and electronic effects.
  • 5-Nitro-lH-indazole precursors may be prepared by diazotization of suitably substituted 2-methylanilines in protic solvents followed by a spontaneous cyclization as described by Porter (Org. Synth., Coll. Vol. Ill, 1955, 660) Medical and Veterinary Uses
  • the compound of the present invention may be used for the treatment of infectious, Gram-positive bacterial infections caused by a variety of bacterial organisms, including those that require long-term therapy (>28 days).
  • the bacterial organisms include gram-positive bacteria such as multiple resistant staphylococci, for example S. aureus and S. epidermidis; multiple resistant streptococci, for example S. pneumoniae and S. pyogenes; and multiple resistant Enterococci, for example E. faecalis; gram negative aerobic bacteria such as Haemophilus, for example H. influenzae and Moraxella, for example M.
  • catarrhalis as well as anaerobic organisms such as bacteroides and Clostridia species, and acid-fast organisms such as Mycobacteria, for example M. tuberculosis; and/or Mycobacterium avium.
  • anaerobic organisms such as bacteroides and Clostridia species
  • acid-fast organisms such as Mycobacteria, for example M. tuberculosis; and/or Mycobacterium avium.
  • Other examples include Escherichia, for example E. coli. intercellular microbes, for example Chlamydia and Rickettsiae.
  • infections examples include central nervous system infections, external ear infections, infections of the middle ear, such as acute otitis media, infections of the cranial sinuses, eye infections, infections of the oral cavity, such as infections of the teeth, gums and mucosa, upper respiratory tract infections, lower respiratory tract infections, genitourinary infections, gastrointestinal infections, gynecological infections, septicemia, bone and joint infections, skin and skin structure infections, bacterial endocarditis, burns, antibacterial prophylaxis of surgery, and antibacterial prophylaxis in immunosuppressed patients, such as patients receiving cancer chemotherapy, or organ transplant patients.
  • infectious diseases that may be treated with the compound of the present invention are gram-positive infections such as osteomyelitis, endocarditis and diabetic foot. Antibacterial activity
  • the in vitro antibacterial activity of the compounds of the present invention may be assessed by following procedures recommended in (1) National Committee for Clinical Laboratory Standards (Jan. 2003), Methods for dilution antimicrobial tests for bacteria that grow aerobically, Approved Standard (6 th ed), M7-A6, NCCLS, Wayne, PA; (2) National Committee for Clinical Laboratory Standards (Mar.
  • the compound of formula I may be used in its native form or as a salt. In cases where forming a stable nontoxic acid or base salt is desired, administration of the compound as a pharmaceutically acceptable salt may be appropriate.
  • pharmaceutically acceptable salts of the present invention include inorganic salts such as hydrochloride, hydrobromide, sulfate, nitrate, bicarbonate, carbonate salts, and organic salts such as tosylate, methanesulfonate, acetate, citrate, malonate, tartarate, succinate, benzoate, ascorbate, etoglutarate, and glycerophosphate.
  • salts may be obtained using standard procedures well known in the art, for example, reacting a sufficiently basic compound such as an amine with a suitable acid affording a physiologically acceptable anion.
  • a sufficiently basic compound such as an amine
  • a suitable acid affording a physiologically acceptable anion.
  • Alkali metal (for example, sodium, potassium or lithium) or alkaline earth metal (for example calcium) salts of carboxylic acids can also be made.
  • a compound of the present invention or its pharmaceutical compositions can be administered orally, parenterally, topically, rectally, transmucosally, or intestinally.
  • Parenteral administrations include indirect injections to generate a systemic effect or direct injections to the afflicted area.
  • Examples of parenteral administrations are subcutaneous, intravenous, intramuscular, intradermal, intrathecal, intraocular, intranasal, intravetricular injections or infusions techniques.
  • Topical administrations include the treatment of infectious areas or organs readily accessibly by local application, such as, for example, eyes, ears including external and middle ear infections, vaginal, open wound, skins including the surface skin and the underneath dermal structures, or other lower intestinal tract. It also includes transdermal delivery to generate a systemic effect.
  • the rectal administration includes the form of suppositories.
  • the transmucosal administration includes nasal aerosol or inhalation applications.
  • the preferred routes of administration are oral and parenteral.
  • compositions of the present invention may be manufactured by processes well known in the art, e.g., by means of conventional mixing, dissolving, granulation, dragee-making, levigating, emulsifying, encapsulating, entrapping, lyophilizing processes or spray drying.
  • Pharmaceutical compositions for use in accordance with the present invention may be formulated in conventional manner using one or more physiologically acceptable carriers comprising excipients and auxiliaries, which facilitate processing of the active compound into preparations, which can be used pharmaceutically. Proper formulation is dependent upon the route of administration chosen.
  • the compound can be formulated by combining the active compound with pharmaceutically acceptable carriers well known in the art.
  • Such carriers enable the compound of the invention to be formulated as tablets, pills, lozenges, dragees, capsules, liquids, solutions, emulsions, gels, syrups, slurries, suspensions and the like, for oral ingestion by a patient.
  • a carrier can be at least one substance which may also function as a diluent, flavoring agent, solubilizer, lubricant, suspending agent, binder, tablet disintegrating agent, and encapsulating agent.
  • Such carriers or excipients include, but are not limited to, magnesium carbonate, magnesium stearate, talc, sugar, lactose, sucrose, pectin, dextrin, mannitol, sorbitol, starches, gelatin, cellulosic materials, low melting wax, cocoa butter or powder, polymers such as polyethylene glycols and other pharmaceutical acceptable materials.
  • Dragee cores are provided with suitable coatings.
  • concentrated sugar solutions may be used which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures.
  • Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses.
  • compositions which can be used orally, include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol.
  • the push-fit capsules can contain the active ingredients in admixture with a filler such as lactose, a binder such as starch, and/or a lubricant such as talc or magnesium stearate and, optionally, stabilizers.
  • the active compound may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, liquid polyethylene glycols, cremophor, capmul, medium or long chain mono-, di- or triglycerides.
  • Stabilizers may be added in these formulations, also.
  • Liquid form compositions include solutions, suspensions and emulsions.
  • solutions of the compound of this invention dissolved in water and water-propylene glycol and water-polyethylene glycol systems, optionally containing suitable conventional coloring agents, flavoring agents, stabilizers and thickening agents.
  • the compound may also be formulated for parenteral administration, e.g., by injections, bolus injection or continuous infusion.
  • Formulations for parenteral administration may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative.
  • the compositions may take such forms as suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulating materials such as suspending, stabilizing and/or dispersing agents.
  • the compound of the invention may be formulated in aqueous solution, preferably in physiologically compatible buffers or physiological saline buffer. Suitable buffering agents include trisodium orthophosphate, sodium bicarbonate, sodium citrate, N- methylglucamine, L(+)-lysine and L(+)-arginine.
  • Parenteral administrations also include aqueous solutions of a water soluble form, such as, without limitation, a salt, of the active compound.
  • suspensions of the active compound may be prepared in a lipophilic vehicle.
  • Suitable lipophilic vehicles include fatty oils such as sesame oil, synthetic fatty acid esters such as ethyl oleate and triglycerides, or materials such as liposomes.
  • Aqueous injection suspensions may contain substances, which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran.
  • the suspension may also contain suitable stabilizers and/or agents that increase the solubility of the compound to allow for the preparation of highly concentrated solutions.
  • the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile, pyrogen-free water, before use.
  • a suitable vehicle e.g., sterile, pyrogen-free water
  • the compound may also be formulated by mixing the agent with a suitable non-irritating excipient, which is solid at room temperature but liquid at rectal temperature and therefore will melt in the rectum to release the drug.
  • suitable non-irritating excipient include cocoa butter, beeswax and other glycerides.
  • compound of the present invention can be conveniently delivered through an aerosol spray in the form of solution, dry powder, or suspensions.
  • the aerosol may use a pressurized pack or a nebulizer and a suitable propellant.
  • the dosage unit may be controlled by providing a valve to deliver a metered amount.
  • Capsules and cartridges of, for example, gelatin for use in an inhaler may be formulated containing a power base such as lactose or starch.
  • the pharmaceutical composition may be formulated in a suitable ointment containing the active component suspended or dissolved in one or more carriers.
  • Carriers for topical administration of the compounds of this invention include, but are not limited to, mineral oil, liquid petrolatum, white petrolatum, propylene glycol, polyoxyethylene, polyoxypropylene compound, emulsifying wax and water.
  • the pharmaceutical compositions can be formulated in a suitable lotion such as suspensions, emulsion, or cream containing the active components suspended or dissolved in one or more pharmaceutically acceptable carriers.
  • suitable carriers include, but are not limited to, mineral oil, sorbitan monosterate, polysorbate 60, cetyl esters wax, ceteary alcohol, 2- octyldodecanol, benzyl alcohol and water.
  • the pharmaceutical compositions may be formulated as micronized suspensions in isotonic, pH adjusted sterile saline, or preferably, as solutions in isotonic, pH adjusted sterile saline, either with or without a preservative such as a benzylalkonium chloride.
  • the pharmaceutical compositions may be formulated in an ointment such as petrolatum.
  • the compound may also be formulated as depot preparations. Such long acting formulations may be in the form of implants.
  • a compound of this invention may be formulated for this route of administration with suitable polymers, hydrophobic materials, or as a sparing soluble derivative such as, without limitation, a sparingly soluble salt.
  • the compound may be delivered using a sustained-release system.
  • sustained-release materials have been established and are well known by those skilled in the art.
  • Sustained-release capsules may, depending on their chemical nature, release the compound for 24 hours or for up to several days.
  • compositions suitable for use in the present invention include compositions wherein the active ingredients are contained in an amount sufficient to achieve the intended purpose, i.e., the treatment or prevent of infectious diseases. More specifically, a therapeutically effective amount means an amount of compound effective to prevent, alleviate or ameliorate symptoms of disease or prolong the survival of the subject being treated.
  • the quantity of active component, that is the compound of this invention, in the pharmaceutical composition and unit dosage form thereof may be varied or adjusted widely depending upon the manner of administration, the potency of the particular compound and the desired concentration. Determination of a therapeutically effective amount is well within the capability of those skilled in the art. Generally, the quantity of active component will range between 0.5% to 90% by weight of the composition.
  • a therapeutically effective amount of dosage of active component will be in the range of about 0.1 to about 400 mg/kg of body weight/day, more preferably about 1.0 to about 50 mg/kg of body weight/day. It is to be understood that the dosages may vary depending upon the requirements of each subject and the severity of the bacterial infection being treated. In average, the effective amount of active component is about 200 mg to 800 mg and preferable 600 mg per day.
  • the desired dose may conveniently be presented in a single dose or as divided doses administered at appropriate intervals, for example, as two, three, four or more sub-doses per day.
  • the sub-dose itself may be further divided, e.g., into a number of discrete loosely spaced administrations; such as multiple inhalations from an insufflator or by application of a plurality of drops into the eye.
  • the initial dosage administered may be increased beyond the above upper level in order to rapidly achieve the desired plasma concentration.
  • the initial dosage may be smaller than the optimum and the daily dosage may be progressively increased during the course of treatment depending on the particular situation.
  • the daily dose may also be divided into multiple doses for administration, e.g., two to four times per day.
  • the effective local concentration of the drug may not be related to plasma concentration and other procedures know in the art may be used to determine the desired dosage amount.
  • HATU N-[(dimethylamino)-lH-l,2,3-triazolo-[4,5-b]pyridin-
  • M% mole percent max maximum meq milliequivalent mg milligram mL milliliter mm millimeter mmol millimol q quartet s singlet t or tr triplet TBS tributylsilyl
  • Step 1 Preparation of l-isopropyl-5-nitro-lH-indazole l,8-Diazabicyclo[5.4.0]undec-7-ene (4.58 mL, 0.0307 mol) is added to 5- nitroindazole (4.00 g, 0.0245 mol) in DMF (50 mL) at room temperature and then stirred for 30 minutes. 2-Iodopropane (3.06 mL, 0.0307 mol) is added dropwise and the mixture allowed to react overnight at room temperature. The solvent is removed in vacuo and the residue diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg- 2 SO 4 ) and evaporated.
  • Iron powder (2.45 g, 0.0439 mol) is added portionwise to a solution of l-isopropyl-5- nitro-lH-indazole (2.25 g, 0.0110 mol) and ammonium chloride (5.86 g, 0.110 mol) in ethanol (100 mL) and water (45 mL) at 80 0 C. The mixture is vigorously stirred and heated for 45 minutes, diluted with dichloromethane (250 ml) and filtered.
  • Step 3 Preparation of (R)-methyl 2-hydroxy-3-(l-isopropyl-lH-indazol-5- ylamino)propanoate (R)-Methyl oxirane-2-carboxylate (0.875 mL, 0.00999 mol), 1-isopropyl-lH-indazol-
  • Step 4 Preparation of (R)-methyl 3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate
  • 1,1'Carbonyldiimidazole (0.906 g, 0.00559 mol) and (R)-methyl 2-hydroxy-3-(l- isopropyl-lH-indazol-5-ylamino)pro ⁇ anoate (1.03 g 0.00373 mol) in acetonitrile (10 mL) are heated at 45 0 C for 1 h.
  • Step 5 Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide Ammonia (2M solution in methanol, 2mL) is added to solid (R)-methyl 3-(l- isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.589 g, 0.00194 mol) and the mixture stirred at room temperature for Ih.
  • Step 2 Preparation of l-methyl-lH-indazol-5-amine Iron powder (5.04 g, 0.0903 mol) is added portionwise to a solution of l-methyl-5- nitro-lH-indazole (4.00 g, 0.0226 mol) and ammonium chloride (12.1 g, 0.225 mol) in ethanol (225 mL) and water (100 mL) at 8O 0 C. The mixture is stirred and heated for Ih, diluted with dichloromethane (500 mL) and filtered.
  • Step 3 Preparation of (R)-methyl 2-hydroxy-3-(l-methyl-lH-indazol-5-ylamino)propanoate (R)-Methyl oxirane-2-carboxylate (0.988 mL, 0.0113 mol), l-methyl-lH-indazol-5- amine (2.00 g, 0.0113 mol) and lithium trifluoromethanesulfonate (1.76 g, 0.0113 mol) in acetonitrile (25 mL) are heated at 50 0 C overnight. The reaction solution is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg 2 SO 4 ) and evaporated.
  • Step 4 Preparation of (R)-methyl 3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate 1,1'Carbonyldiimidazole (0.849 g, 0.00524 mol) and (R)-methyl 2-hydroxy-3-(l- methyl-lH-indazol-5-ylamino)propanoate (0.870 g 0.00349 mol) in acetonitrile (15 mL) are stirred at 55 0 C for 1 h.
  • Step 1 Preparation of l-ethyl-5-nitro-lH-indazole. Sodium hydride (4.05 g, 0.101 mol) is added to a solution of 5-nitroindazole (15.Og,
  • Step 2 Preparation of 1 -ethyl- lH-indazol-5-amine.
  • Iron powder (5.17 g, 0.0926 mol) is added to a solution of l-ethyl-5-nitro-lH- indazole (4.75 g, 0.0231 mol) and ammonium chloride (12.4 g, 0.231 mol) in ethanol (175 mL) and water (75 mL) at 80 0 C. The mixture is vigorously stirred and heated for 1 hour, diluted with dichloromethane (500 mL) and filtered.
  • Step 3 Preparation of (R)-methyl 3-(l-ethyl-lH-indazol-5-ylamino)-2-hydroxypropanoate.
  • Step 4 Preparation of (R)-methyl 3-(l-ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate.
  • 1,1'Carbonyldiimidazole (0.680 g, 0.00419 mol) and (R)-methyl 3-(l-ethyl-lH- indazol-5-ylamino)-2-hydroxypropanoate (0.735 g 0.00279 mol) in acetonitrile (10 mL) are heated at 55 0 C for 1 h. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg 2 SO 4 ) and evaporated.
  • Step 1 Preparation of l-.sec-butyl-lH-indazol-5-amine Iron metal (0.61 g, 10.9 mmol) is added in portions over a period of 45 minutes to a refluxing solution of l-5ec-butyl-5-nitro-lH-indazole (0.8 g, 3.65 mmol) and ammonium chloride (1.95 g, 36.5 mmol) in 36 mL of 2:1 ethanol-HaO. The rust colored mixture is refluxed for another 30 minutes and then cooled, diluted with dichloromethane. The organic layer is separated and the aqueous phase extracted with more dichloromethane.
  • Step 3 Preparation of (5R)-methyl 3-(l-sec-butyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate l,rCarbonyldiimidazole (0.7 g, 4.32 mmol) is added to a solution of (2R)-methyl 3- (l-sec-butyl-lH-indazol-5-ylamino)-2-hydroxypropanoate (0.63 g, 2.16 mmol) in acetonitrile (22 mL) and heated at 65 0 C for 60 hours.
  • the reaction mixture is diluted with dichloromethane, washed with dilute citric acid, dilute NaHCO 3 , water, brine, and dried (MgSO 4 ), filtered and concentrated.
  • Step 4 Preparation of (5R)-3-(l-seobutyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide.
  • Step 1 Preparation of ( R )-5-(hydroxymethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2- one
  • Lithium bis(trimethylsilyl)amide (IM in THF, 35.46 ml, 0.035 mol) is added dropwise to benzyl l-methyl-lH-indazol-5-ylcarbamate (5.Og, 0.0173 mol) in THF at -78 0 C and the mixture stirred for 90 minutes.
  • R-Glycidyl butyrate (2.76 ml, 0.019 mol) is added, the reaction mixture allowed to warm to room temperature and stirred for 14 h.
  • the reaction is quenched with saturated aqueous ammonium chloride, diluted with water and extracted with dichloromethane. The organic layer is washed with brine, dried (Na 2 SO 4 ) and evaporated.
  • Step 2 Preparation of (R)-(3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate
  • Methanesulfonyl chloride (1.25 g, 0.011 mol) is added dropwise at 0 0 C to ( R )-5- (hydroxymethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2-one (2.7 g, 0.011 mol) and triethylamine (2.29 ml, 0.016 mol) in dichloromethane ( 25 ml) and the mixture stirred for 45 minutes. The reaction is quenched with saturated sodium bicarbonate, diluted with water and extracted with dichloromethane.
  • Step 3 Preparation of ( R )-5-(azidomethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2-one (R)-(3-(l-Methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate (3.2 g, 0.0098 mol) and sodium azide (3.58g, 0.054 mol) in dimethylformamide (15 ml) is heated at 70 0 C for 16 h. The reaction is diluted with water and extracted with dichloromethane. The organic layer is washed with brine, dried (Na 2 SO 4 ) and evaporated.
  • Step 4 Preparation of (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-(l-methyl-lH-indazol-5- yl)oxazolidin-2-one
  • Norbornadiene (0.47 ml, 0.0044 mol) and ( R )-5-(azidomethyl)-3-(l-methyl-lH- indazol-5-yl)oxazolidin-2-one ( 0.6 g, 0.0022 mol) in dioxane (20 ml) are heated at 7O 0 C for 14 h.
  • Step 1 Preparation of benzyl l-isopropyl-lH-indazol-5-ylcarbamate
  • Benzyl chloroformate (3.59 mL, 0.0251 mol) is added dropwise to a solution of 1- isopropyl-lH-indazol-5-amine (4.00 g, 0.0228 mol) and pyridine (3.70 mL, 0.0457 mol) in dichloromethane (50 mL) at 0 0 C. The reaction is allowed to warm to room temperature and stirred overnight. The solvent is evaporated in vacuo, the residue dissolved in dichloromethane and washed with saturated citric acid solution and brine.
  • Step 2 Preparation of (R)-5-(hydroxymethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2- one Lithium bis(trimethylsilyl)amide in tetrahydrofuran (1.0M solution in THF, 24.2 mL,
  • Step 3 Preparation of (R)-(3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate
  • Methanesulfonyl chloride (0.402 mL, 0.00519 mol) is added to (R)-5- (hydroxymethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2-one (1.43 g, 0.00519 mol) and triethylamine (1.09 mL, 0.00779 mol) in dichloromethane (10 mL) at 0 0 C. The reaction is stirred for 30 minutes, diluted with dichloromethane, washed with saturated sodium bicarbonate solution and brine, dried (MgSO 4 ), and concentrated to afford the title compound.
  • Step 4 Preparation of (R)-5-(azidomethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2-one Sodium azide (1.69 g, 0.0260 mol) and (R)-(3-(l -isopropyl-lH-indazol-5-yl)-2- oxooxazolidin-5-yl)methyl methanesulfonate (1.84 g, 0.00519 mol) in dimethylformamide (10 mL) are heated at 70 0 C overnight. The reaction is diluted with EtOAc, washed with water and brine, dried (MgSO 4 ), and concentrated.
  • Step 5 Preparation of (R)-l-((3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)- lH-l,2,3-triazole-4-carbonitrile
  • Dichloroacetone (0.124 mL, 0.00129 mol) is added to a solution ofp- toluenesulfonylhydrazide (0.240 g, 0.00129 mol) and acetic acid (0.0370 mL, 0.000644 mol) in methanol (5 mL) at room temperature.
  • methanol 5 mL
  • the resulting slurry is allowed to react at room temperature for 1 h to generate N'-( 1,1 -dichloropropan-2-ylidene)-4- methylbenzenesulfonohydrazide.
  • Step 1 Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((4-tributylstannyl-lH-l,2,3- triazol- 1 -yl)methyl)oxazolidin-2-one
  • Ethynyltributylstannane (0.462 mL, 0.00160 mol) and (R)-5-(azidomethyl)-3-(l- isopropyl-lH-indazol-5-yl)oxazolidin-2-one (0.480 g, 0.00160 mol) in toluene (3 mL) are heated to 70 0 C for 3 days.
  • Step 2 Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((4-fluoro-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one
  • Selectfluor fluorinating agent (l-Chloromethyl-4-fluoro-l,4- diazoniabicyclo[2.2.2]octane bis(tetrafluoroborate)) (0.399 g, 0.00113 mol) and (R)-3-(l- isopropyl-lH-indazol-5-yl)-5-((4-tributylstannyl-lH-l,2,3-triazol-l-yl)methyl)oxazolidin-2- one (0.660 g, 0.00107 mol) in acetonitrile (10 mL) are stirred at room temperature for 2 days.
  • Dichloroacetaldehyde, hydrate (0.169 g, 0.00129 mol) is added to a solution ofp- toluenesulfonylhydrazide (0.240 g, 0.00129 mol) and acetic acid (0.0370 mL, 0.000644 mol) in methanol (5 mL) at room temperature. The mixture is stirred for 1 h to generate N'-(l,l- dichloropropan-2-ylidene)-4-methylbenzenesulfonohydrazide.

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Abstract

The present invention provides a compound of formula (I) or a pharmaceutically acceptable salt thereof wherein: W is C(=O)NHR1, C(=S)NHR1, or CH2het; Y is H, or CF; R1 is H, C16alkyl, or OC1-6alkyl; X is H, C1-6alkyl, or C3-7cycloalkyl; Z is H, halo, C1-6alkyl, OC1-6alkyl, or SC1-6alkyl; het is a five-(5) or six-(6) membered heterocyclic ring having 1-4 heteroatoms selected from the group consisting of oxygen, sulfur, and nitrogen within the ring. The compounds are useful as antibacterial agents.

Description

INDAZOLE OXAZOLIDINONES AS ANTIBACTERIAL AGENTS
FIELD OF INVENTION
The present invention relates to novel derivatives of indazole oxazolidinones, pharmaceutical compositions thereof, methods for their use, and methods for preparing the isoxazol oxazolidinone derivatives. These compounds have potent activities against gram- positive bacteria.
BACKGROUND OF THE INVENTION Antibacterial resistance is a global clinical and public health problem that has emerged with alarming rapidity in recent years and undoubtedly will increase in the near future. Resistance is a problem in the community as well as in health care settings, where transmission of bacteria is greatly amplified. Because multiple drug resistance is a growing problem, physicians are now confronted with infections for which there is no effective therapy. As result, structurally novel antibacterials with a new mode of action have become increasingly important in the treatment of bacterial infections.
Among newer antibacterial agents, oxazolidinone compounds are the most recent synthetic class of antimicrobials. This invention provides novel indazole oxazolidinone derivatives, which are active against a number of human and veterinary pathogens, including multiple resistant strains of bacteria.
INFORMATION DISCLOSURE
U.S. Patent 5,182,403; U.S. Patent 6,239,152 discloses; U.S. Patent 5,164,510; WO 1996/38444; and WO 2004/074282 disclose oxazolidinones as antibacterial agents.
SUMMARY OF THE INVENTION The present invention provides a compound of formula I
Figure imgf000002_0001
I or a pharmaceutically acceptable salt thereof wherein: W is CC=O)NHR1, CC=S)NHR1, or CH2het; Y is H, or CF; R1 is (a) H, (b) Ci-6alkyl, or
(C) OCi-6alkyl;
X is (a) H,
(b) Ci-βalkyl, or
(c) C3-7cycloalkyl;
Z is
(a) H,
(b) halo,
(C) Ci-6alkyl,
(d) OC1-6alkyl, or
(e) SC1-6alkyl; het is a five-(5) or six-(6) membered heterocyclic ring having 1-4 heteroatoms selected from the group consisting of oxygen, sulfur, and nitrogen within the ring, wherein each carbon atom I het is optionally substituted with C^alkyl, C2-4alkenyl, C^alkynyl, halo, OR2, CN, NO2, NR2R2, oxo, CF3, OCF3, C(=O)C1-4alkyl, OC(=O)CMalkyl, or C(=O)OR2; at each occurrence, Ci-6alkyl is optionally substituted with aryl, het, halo, CN, OR2, NO2, N3, NR2R2, or Ci-4alkyl; and R2 is H or CMalkyl.
In another aspect, the present invention also provides: a pharmaceutical composition which comprises a pharmaceutically acceptable carrier and an effective amount of a compound of formula I, a method for treating gram-positive microbial infections in a mammal by administering to the subject in need a therapeutically effective amount of a compound of formula I or a pharmaceutically acceptable salt thereof, and a use of a compound of formula I or a pharmaceutically acceptable salt thereof to prepare a medicament for treating gram-positive microbial infections.
The invention may also provide novel intermediates and novel processes that are useful for preparing compounds of formula I.
DETAILED DESCRIPTION OF THE INVENTION Unless otherwise stated, the following terms used in the specification and claims have the meanings given below:
The carbon atom content of various hydrocarbon-containing moieties is indicated by a prefix designating the minimum and maximum number of carbon atoms in the moiety, i.e., the prefix Q.j indicates a moiety of the integer "i" to the integer "j" carbon atoms, inclusive. Thus, for example, Ci-7 alkyl refers to alkyl of one to seven carbon atoms, inclusive. The term alkyl, alkenyl or alkynyl refer to both straight and branched groups, but reference to an individual radical such as "propyl" embraces only the straight chain radical, a branched chain isomer such as "isopropyl" being specifically referred to.
The term "C3-7cycloalkyl" refers to a cyclic saturated monovalent hydrocarbon group of three to seven carbon atoms, e.g., cyclopropyl, cyclohexyl, and the like.
The term "halo" refers to fluoro (F), chloro (Cl), bromo (Br), or iodo (I). The term "het" is a five- (5) or six- (6) membered heterocyclic ring having 1-4 heteroatoms selected from the group consisting of oxygen, sulfur, and nitrogen within the ring. An examples of het includes, but are not limited to, pyrrole, imidazole, pyrazole, 1,2,3- triazole, 1,3,4-triazole, oxazole, thiazole, isoxazole, isothiazole, 1,3,4-oxadiazole, 1,3,4- thiadiazole, 1,2,3-thiadiazole, tetrazole, pyridine, pyrazine, pyrimidine, pyridazine, indolizine, isoindole, indole, dihydroindole, indazole, purine, quinolizine, isoquinoline, quinoline, phthalazine, quinoxaline, quinazoline, cinnoline, pteridine, carbazole, carboline, phenanthridine, acridine, phenanthroline, isothiazole, phenazine, isoxazole, isoxazolinone, phenoxazine, phenothiazine, imidazolidine, imidazoline, piperidine, piperazine, indoline, phthalimide, 1 ,2,3,4-tetrahydroisoquinoline, 4,5,6,7-tetrahydrobenzo[b]thiophene, thiazole, thiadiazole, tetrazole, thiazolidine, thiophene, benzo[b]thiophene, morpholine, thiomorpholine, (also referred to as thiamorpholine,), piperidine, pyrrolidine, tetrahydrofuran, or the like. Another example of het includes, but are not limited to, pyridine, thiophene, furan, pyrazole, pyrimidine, 2-pyridyl, 3-pyridyl, 4-pyridyl, 2-pyrimidinyl, 4- pyrimidinyl, 5-pyrimidinyl, 3-pyridazinyl, 4-pyridazinyl, 3-pyrazinyl, 4-oxo-2-imidazolyl, 2- imidazolyl, 4-imidazolyl, 3-isoxaz-olyl, 4-is-oxaz-olyl, 5-isoxaz-olyl, 3-pyrazolyl, 4- pyrazolyl, 5-pyrazolyl, 2-oxazolyl, 4-oxazolyl, 4-oxo-2-oxazolyl, 5-oxazolyl, 1,2,3- oxathiazole, 1 ,2,3-oxadiazole, 1,2,4-oxadiazole, 1,2,5-oxadiazole, 1,3,4-oxadiazole, 2- thiazolyl, 4-thiazolyl, 5-thiazolyl, 3-isothiazole, 4-isothiazole, 5-isothiazole, 2-furanyl, 3- furanyl, 2-thienyl, 3-thienyl, 2-pyrrolyl, 3-pyrrolyl, 3-isopyrrolyl, 4-isopyrrolyl, 5-isopyrrolyl, 1,2,3,-oxathiazole-l-oxide, 1 ,2,4-oxadiazol-3-yl, 1 ,2,4-oxadiazol-5-yl, 5-oxo-l,2,4-oxadiazol- 3-yl, l,2,4-thiadiazol-3-yl, l,2,5-thiadiazol-3-yl, l,2,4-thiadiazol-5-yl, 3-oxo-l,2,4-thiadiazol- 5-yl, l,3,4-thiadiazol-5-yl, 2-oxo-l, 3,4-thiadiazol-5-yl, 1,2,3-triazole-l-yl, l,2,4-triazol-3-yl, l,2,4-triazol-5-yl, tetrazole- 1-yl, l,2,3,4-tetrazol-5-yl, 5-oxazolyl, 3-isothiazolyl, 4- isothiazolyl and 5-isothiazolyl, 1,3,4,-oxadiazole, 4-oxo-2-thiazolinyl, or 5-methyl- 1,3,4- thiadiazol-2-yl, thiazoledione, 1,2,3,4-thiatriazole, or 1 ,2,4-dithiazolone.
The term "pharmaceutically acceptable carrier" means a carrier that is useful in preparing a pharmaceutical composition that is generally safe, non-toxic and neither biologically nor otherwise undesirable, and includes a carrier that is acceptable for veterinary use as well as human pharmaceutical use. "A pharmaceutically acceptable carrier" as used in the specification and claims includes both one and more than one such carrier.
The term "mammal" refers to human or warm-blooded animals including livestock and companion animals. Livestock refers to animals suitable for human meat consumption. Examples include pigs, cattle, chickens, fish, turkeys, rabbits, etc. Companion animals refer to animals kept as pets such as dogs, cats, etc.
The term "optional" or "optionally" means that the subsequently described event or circumstance may, but need not, occur, and that the description includes instances where the event or circumstance occurs and instances in which it does not. The term "treating" or "treatment" of a disease includes: (1) preventing the disease, i.e. causing the clinical symptoms of the disease not to develop in a mammal that may be exposed to or predisposed to the disease but does not yet experience or display symptoms of the disease; (2) inhibiting the disease, i.e., arresting or reducing the development of the disease or its clinical symptoms; or (3) relieving the disease, i.e., causing regression of the disease or its clinical symptoms.
The term "therapeutically effective amount" means the amount of a compound that, when administered to a mammal for treating a disease, is sufficient to effect such treatment for the disease. The "therapeutically effective amount" will vary depending on the compound, the disease and its severity and the age, weight, etc., of the mammal to be treated. The term "prodrug" refers to compounds that are rapidly transformed in vivo to yield the parent compound of the above formulas, for example, by hydrolysis in blood. A thorough discussion is provided in T. Higuchi and V. Stella, "Pro-drugs as Novel Delivery Systems," Vol. 14 of the A.C.S. Symposium Series, and in Bioreversible Carriers in Drug Design, ed. Edward B. Roche, American Pharmaceutical Association and Pergamon Press, 1987. The term "leaving group" has the meaning conventionally associated with it in synthetic organic chemistry i.e., an atom or group capable of being displaced by a nucleophile and includes halogen, alkylsulfonyloxy, ester, or amino such as chloro, bromo, iodo, mesyloxy, tosyloxy, trifluofosulfonyloxy, methoxy, N,O-dimethylhydroxyl-amino, and the like. Compounds that have the same molecular formula but differ in the nature or sequence of bonding of their atoms or the arrangement of their atoms in space are termed "isomers". Isomers that differ in the arrangement of their atoms in space are termed "stereoisomers".
It will be appreciated by those skilled in the art that compounds of the invention having a chiral center may exist in and be isolated in optically active and racemic forms. Some compounds may exhibit polymorphism. It is to be understood that the present invention encompasses any racemic, optically-active, polymorphic, tautomeric, or stereoisomeric form, or mixture thereof, of a compound of the invention, which possesses the useful properties described herein, it being well known in the art how to prepare optically active forms (for example, by resolution of the racemic form by recrystallization techniques, by synthesis from optically-active starting materials, by chiral synthesis, or by chromatographic separation using a chiral stationary phase) and how to determine antiviral activity using the standard tests described herein, or using other similar tests which are well known in the art.
The compounds of the present invention are generally named according to the IUPAC or CAS nomenclature system. Abbreviations which are well known to one of ordinary skill in the art may be used (e.g. "Ph" for phenyl, "Me" for methyl, "Et" for ethyl, "h" for an hour or hours and "it" for room temperature). Specific and preferred values listed below for radicals, substituents, and ranges, are for illustration only; they do not exclude other defined values or other values within defined ranges for the radicals and substituents. Specifically, alkyl denotes both straight and branched groups; but reference to an individual radical such as "propyl" embraces only the straight chain radical, a branched chain isomer such as "isopropyl" being specifically referred to. Specifically, alkyl is methyl, ethyl, propyl, isopropyl, butyl, iso-butyl, sec-butyl, and their isomeric forms thereof. Specifically, cycloalkyl is cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and their isomeric forms thereof. Specifically, halo is fluoro (F), chloro (Cl).
Specifically Y is H.
Specifically W is Ct=O)NHR1.
Specifically, R1 is C^alkyl, optionally substituted with one, two or three fluoro (F), or chloro (Cl). Specifically, R1 is H, CH3, or CH2CH3.
Specifically, W is CH2het.
Specifically, W is 1,2,3-triazole-l-yl methyl.
Specifically, V is an oxygen atom (O).
Specifically, X is H. Specifically, X is methyl, ethyl, propyl, isopropyl, butyl, iso-butyl, or sec-butyl.
Specifically, R2 is H, or C]-4alkyl.
Examples of the present invention include:
(1) (i?)-3-(l-Isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(2) (i?)-3-(l-Isopropyl-lH-indazol-5-yl)-N-methyl-2-oxooxazolidine-5-carboxamide, (3) (R)-3-(l -Methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(4) (R)-N-Methyl-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide, (5) (i?)-3-(l-Ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(6) (i?)-3-(l-Ethyl-lH-indazol-5-yl)-N-metliyl-2-oxooxazolidine-5-carboxamide,
(7) (5i?)-3-(l-5ec-Butyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(8) (5i?)-3-(l-5rec-Butyl-lH-indazol-5-yl)-N-methyl-2-oxooxazolidine-5-carboxamide5 (9) (i?)-5-((lΗ-l,2,3-Triazol-l-yl)methyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2-one,
(10) (R)-I -((3-(I -Methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)-lH-l ,2,3- triazole-4-carbonitrile,
(11) (R)-I -((3-(I -Isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)-lH-l ,2,3- triazole-4-carbonitrile, (12) (5R)-5-((lH-l,2,3-Triazol-l-yl)methyl)-3-(l-sec-butyl-lH-indazol-5-yl)oxazolidin-2- one,
(13) (i?)-3-(l-Isopropyl-lΗ-indazol-5-yl)-5-((4-methyl-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one,
(14) (i?)-3-(l -Isopropyl-lΗ-indazol-5-yl)-5-((4-fluoro-lH-l ,2,3-triazol-l - yl)methyl)oxazolidin-2-one,
(15) (R)-3-(l -Isopropyl-lH-indazol-5-yl)-5-((lH-l ,2,3-triazol-l -yl)methyl)oxazolidin-2- ' one,
(16) (i?)-5-((lH-l,2,3-Triazol-l-yl)methyl)-3-((5)-l-sec-butyl-lH-indazol-5- yl)oxazolidin-2-one, (17) (i?)-5-((lH-l ,2,3-Triazol-l -yl)methyl)-3-((i?)-l -sec-butyl-lH:indazol-5- yl)oxazolidin-2-one, or
(18) (i?)-5-((lH-l ,2,3-triazol-l -yl)methyl)-3-((S)-l -5ec-butyl-7-fluoro-lH-indazol-5- yl)oxazolidin-2-one.
Compounds of this invention can be prepared in accordance with one or more of the Schemes discussed below. All of the starting materials are either commercially available or can be prepared by procedures that would be well known to one of ordinary skill in organic chemistry. The variables used in the Schemes are as defined below, or as in the summary of the invention or claims.
SCHEME I
Figure imgf000008_0001
The compounds of the present invention may be prepared according to Scheme I. The substituted 5-amino-indazole (1) is reacted with an alkyl (2i?)-epoxypropanoate and a Lewis acid such as lithium triflate as described in US Patent 6,919,329. The resulting amino alcohol (2) can then be ring closed to give the aryl oxazolidinones (3) following conditions as described in Scheme 3?. Subsequent treatment of oxazolidinone ester (3) with ammonia or optionally substituted amines (R1NH2) in a suitable solvent such as methanol or acetonitrile affords amides (4) (R1 is H or optionally substituted alkyl). Similarly treatment of ester (3) with 0-alkylhydoxylamines or hydrazines provides the hydroxamate (R1Is Oalkyl).
SCHEME π
Figure imgf000008_0002
Triazole indazole oxazolidinones (6) are most conveniently prepared, as shown in Scheme II, by reacting, amine (5) with 2,2-dichloroacetaldehyde-/>-tosylhydrazone (R' = H) or α,α-dichloroacetone tosylhydrazone (R' = Me) according to the methods of Ichikawa (Chem. Pharm. Bull., 2000, 48, 1947-1953) and Sakai (Bull. Chem. Soc. Jpn., 1986, 59, 179-184). The starting material (5) can be prepared according to the procedure described in US patent No. 5,182,403. SCHEME m
Figure imgf000009_0001
Alternatively, triazole indazole oxazolidinones can be prepared according to Scheme III following the sequence of chemical transformations described by Brickner (J. Med. Chem., 1996, 39, 673-679). Cycloaddition of the intermediate azido compound (can be prepared according to the procedure described in US patent No. 5,182,403) with norbornadiene in a suitable solvent, such as dioxane at reaction temperatures in the range of about 50 0C to about 1000C affords the 1,2,3-triazolyl derivative (R' = H). A variety of other substituted triazoles (R' = Me, Cl, F, -CH2OH, -NO2, -CN, -C≡CH, -NH2, etc.) may be prepared via cycloaddition and subsequent chemical group modification by known methods when necessary.
SCHEME IV
Figure imgf000009_0002
8 9 hi Scheme IV, hydroxymethyl indazole derivatives (can be prepared according to the proceduer described by Brickner, J. Med. Chem., 1996, 39, 673-679) can be further converted to heteroaryl amine analogs using chemistry described by Perova et al. in Zh. Org. Khim. 1994, vol. 30, pp.1660-1663 and the methods described in PCT publication WO 9964417. hi these procedures the hydroxymethyl indazole (8) is coupled with an appropriate amino- isoxazole or hydroxy-isoxazole, for example 3-(2,2,2-trichloroethoxycarbonyl- amino)isoxazole (may be prepared as described in PCT publication WO 0021960) or 3- hydroxyisoxazole (may be prepared as described in US Patent 3,687,968). These reactions can be performed with a suitable coupling reagent, such as diisopropylazo-dicarboxylate (DIAD). The coupling reaction is typically conducted in a polar aprotic solvent, such as dimethylformamide, acetonitrile, tetrahydrofuran, or mixtures thereof, in the presence of organic base, such as triphenylphosphine. The process is typically carried out at about 0 to about 50 0C. When coupling to an amino-isoxazole, the resulting carbamic acid intermediate can then be reduced to the heteroaryl amine (9). SCHEME V
Figure imgf000010_0001
» In Scheme V, the requisite l-alkyl-5-nitro-lH-indazole (1) starting material is most conveniently prepared via alkylation of an appropriately known substituted 5-nitro-lH- indazole (10) with an alkylating agent such as an alkyl halide or tosylate in the presence of an inorganic or organic base such as potassium hydroxide, sodium hydride, lithium bis(trimethylsilylamide), l,8-diazabicyclo[5.4.0]undec-7-ene, or sodium methoxide in a suitable solvent such as methanol, dimethylformarnide or dimethyl sulfoxide leading to a mixture of 1 -alkyl- IH- and 2-alkyl-2H-indazoles which are readily separated by chromatography or selective crystallization. The ratio of 1 -alkyl- IH- and 2-alkyl-2H- indazole products is influenced by a variety of factors including the choice of alkylating agent, the acidity or basicity of the reaction media, protic or aprotic solvents, as well as steric and electronic effects. 5-Nitro-lH-indazole precursors may be prepared by diazotization of suitably substituted 2-methylanilines in protic solvents followed by a spontaneous cyclization as described by Porter (Org. Synth., Coll. Vol. Ill, 1955, 660) Medical and Veterinary Uses
The compound of the present invention may be used for the treatment of infectious, Gram-positive bacterial infections caused by a variety of bacterial organisms, including those that require long-term therapy (>28 days). Examples of the bacterial organisms include gram-positive bacteria such as multiple resistant staphylococci, for example S. aureus and S. epidermidis; multiple resistant streptococci, for example S. pneumoniae and S. pyogenes; and multiple resistant Enterococci, for example E. faecalis; gram negative aerobic bacteria such as Haemophilus, for example H. influenzae and Moraxella, for example M. catarrhalis; as well as anaerobic organisms such as bacteroides and Clostridia species, and acid-fast organisms such as Mycobacteria, for example M. tuberculosis; and/or Mycobacterium avium. Other examples include Escherichia, for example E. coli. intercellular microbes, for example Chlamydia and Rickettsiae.
Examples of infections that may be treated with the compound of the present invention include central nervous system infections, external ear infections, infections of the middle ear, such as acute otitis media, infections of the cranial sinuses, eye infections, infections of the oral cavity, such as infections of the teeth, gums and mucosa, upper respiratory tract infections, lower respiratory tract infections, genitourinary infections, gastrointestinal infections, gynecological infections, septicemia, bone and joint infections, skin and skin structure infections, bacterial endocarditis, burns, antibacterial prophylaxis of surgery, and antibacterial prophylaxis in immunosuppressed patients, such as patients receiving cancer chemotherapy, or organ transplant patients. Specifically, infectious diseases that may be treated with the compound of the present invention are gram-positive infections such as osteomyelitis, endocarditis and diabetic foot. Antibacterial activity
The in vitro antibacterial activity of the compounds of the present invention may be assessed by following procedures recommended in (1) National Committee for Clinical Laboratory Standards (Jan. 2003), Methods for dilution antimicrobial tests for bacteria that grow aerobically, Approved Standard (6th ed), M7-A6, NCCLS, Wayne, PA; (2) National Committee for Clinical Laboratory Standards (Mar. 2001), Methods for antimicrobial susceptibility testing of anaerobic bacteria, Approved Standard (5th ed), M11-A4, NCCLS, Wayne, PA; (3) National Committee for Clinical Laboratory Standards (Jan.2003), MIC testing supplemental tables, M 100-S 13 (for use with M7-A6), NCCLS, Wayne, PA; and (4) Murray PR, Baron EJ, Jorgensen JH, et al. Manual of Clinical Microbiology (8th ed) Washington, DC: American Society for Microbiology Press, 2003. The antibacterial activity can be presented in the form of MIC value. The MIC value is the lowest concentration of drug, which prevented macroscopically visible growth under the conditions of the test. Table 1 lists the in vitro antibacterial activity of the present invention.
Table 1 Results of in vitro antibacterial activity MIC3 (μg/mL)
Figure imgf000011_0001
Pharmaceutical Salts
The compound of formula I may be used in its native form or as a salt. In cases where forming a stable nontoxic acid or base salt is desired, administration of the compound as a pharmaceutically acceptable salt may be appropriate. Examples of pharmaceutically acceptable salts of the present invention include inorganic salts such as hydrochloride, hydrobromide, sulfate, nitrate, bicarbonate, carbonate salts, and organic salts such as tosylate, methanesulfonate, acetate, citrate, malonate, tartarate, succinate, benzoate, ascorbate, etoglutarate, and glycerophosphate. Pharmaceutically acceptable salts may be obtained using standard procedures well known in the art, for example, reacting a sufficiently basic compound such as an amine with a suitable acid affording a physiologically acceptable anion. Alkali metal (for example, sodium, potassium or lithium) or alkaline earth metal (for example calcium) salts of carboxylic acids can also be made.
Routes of Administration
In therapeutic use for treating, or combating, bacterial infections in a mammal (i.e. human and animals), a compound of the present invention or its pharmaceutical compositions can be administered orally, parenterally, topically, rectally, transmucosally, or intestinally.
Parenteral administrations include indirect injections to generate a systemic effect or direct injections to the afflicted area. Examples of parenteral administrations are subcutaneous, intravenous, intramuscular, intradermal, intrathecal, intraocular, intranasal, intravetricular injections or infusions techniques.
Topical administrations include the treatment of infectious areas or organs readily accessibly by local application, such as, for example, eyes, ears including external and middle ear infections, vaginal, open wound, skins including the surface skin and the underneath dermal structures, or other lower intestinal tract. It also includes transdermal delivery to generate a systemic effect.
The rectal administration includes the form of suppositories.
The transmucosal administration includes nasal aerosol or inhalation applications.
The preferred routes of administration are oral and parenteral.
Composition/Formulation
Pharmaceutical compositions of the present invention may be manufactured by processes well known in the art, e.g., by means of conventional mixing, dissolving, granulation, dragee-making, levigating, emulsifying, encapsulating, entrapping, lyophilizing processes or spray drying. Pharmaceutical compositions for use in accordance with the present invention may be formulated in conventional manner using one or more physiologically acceptable carriers comprising excipients and auxiliaries, which facilitate processing of the active compound into preparations, which can be used pharmaceutically. Proper formulation is dependent upon the route of administration chosen.
For oral administration, the compound can be formulated by combining the active compound with pharmaceutically acceptable carriers well known in the art. Such carriers enable the compound of the invention to be formulated as tablets, pills, lozenges, dragees, capsules, liquids, solutions, emulsions, gels, syrups, slurries, suspensions and the like, for oral ingestion by a patient. A carrier can be at least one substance which may also function as a diluent, flavoring agent, solubilizer, lubricant, suspending agent, binder, tablet disintegrating agent, and encapsulating agent. Examples of such carriers or excipients include, but are not limited to, magnesium carbonate, magnesium stearate, talc, sugar, lactose, sucrose, pectin, dextrin, mannitol, sorbitol, starches, gelatin, cellulosic materials, low melting wax, cocoa butter or powder, polymers such as polyethylene glycols and other pharmaceutical acceptable materials. Dragee cores are provided with suitable coatings. For this purpose, concentrated sugar solutions may be used which may optionally contain gum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures. Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses.
Pharmaceutical compositions, which can be used orally, include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol. The push-fit capsules can contain the active ingredients in admixture with a filler such as lactose, a binder such as starch, and/or a lubricant such as talc or magnesium stearate and, optionally, stabilizers. In soft capsules, the active compound may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, liquid polyethylene glycols, cremophor, capmul, medium or long chain mono-, di- or triglycerides. Stabilizers may be added in these formulations, also.
Liquid form compositions include solutions, suspensions and emulsions. For example, there may be provided solutions of the compound of this invention dissolved in water and water-propylene glycol and water-polyethylene glycol systems, optionally containing suitable conventional coloring agents, flavoring agents, stabilizers and thickening agents.
The compound may also be formulated for parenteral administration, e.g., by injections, bolus injection or continuous infusion. Formulations for parenteral administration may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative. The compositions may take such forms as suspensions, solutions or emulsions in oily or aqueous vehicles, and may contain formulating materials such as suspending, stabilizing and/or dispersing agents. For injection, the compound of the invention may be formulated in aqueous solution, preferably in physiologically compatible buffers or physiological saline buffer. Suitable buffering agents include trisodium orthophosphate, sodium bicarbonate, sodium citrate, N- methylglucamine, L(+)-lysine and L(+)-arginine.
Parenteral administrations also include aqueous solutions of a water soluble form, such as, without limitation, a salt, of the active compound. Additionally, suspensions of the active compound may be prepared in a lipophilic vehicle. Suitable lipophilic vehicles include fatty oils such as sesame oil, synthetic fatty acid esters such as ethyl oleate and triglycerides, or materials such as liposomes. Aqueous injection suspensions may contain substances, which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilizers and/or agents that increase the solubility of the compound to allow for the preparation of highly concentrated solutions.
Alternatively, the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile, pyrogen-free water, before use. For suppository administration, the compound may also be formulated by mixing the agent with a suitable non-irritating excipient, which is solid at room temperature but liquid at rectal temperature and therefore will melt in the rectum to release the drug. Such materials include cocoa butter, beeswax and other glycerides.
For administration by inhalation, compound of the present invention can be conveniently delivered through an aerosol spray in the form of solution, dry powder, or suspensions. The aerosol may use a pressurized pack or a nebulizer and a suitable propellant. In the case of a pressurized aerosol, the dosage unit may be controlled by providing a valve to deliver a metered amount. Capsules and cartridges of, for example, gelatin for use in an inhaler may be formulated containing a power base such as lactose or starch. For topical applications, the pharmaceutical composition may be formulated in a suitable ointment containing the active component suspended or dissolved in one or more carriers. Carriers for topical administration of the compounds of this invention include, but are not limited to, mineral oil, liquid petrolatum, white petrolatum, propylene glycol, polyoxyethylene, polyoxypropylene compound, emulsifying wax and water. Alternatively, the pharmaceutical compositions can be formulated in a suitable lotion such as suspensions, emulsion, or cream containing the active components suspended or dissolved in one or more pharmaceutically acceptable carriers. Suitable carriers include, but are not limited to, mineral oil, sorbitan monosterate, polysorbate 60, cetyl esters wax, ceteary alcohol, 2- octyldodecanol, benzyl alcohol and water.
For ophthalmic and otitis uses, the pharmaceutical compositions may be formulated as micronized suspensions in isotonic, pH adjusted sterile saline, or preferably, as solutions in isotonic, pH adjusted sterile saline, either with or without a preservative such as a benzylalkonium chloride. Alternatively, for ophthalmic uses, the pharmaceutical compositions may be formulated in an ointment such as petrolatum.
In addition to the formulations described previously, the compound may also be formulated as depot preparations. Such long acting formulations may be in the form of implants. A compound of this invention may be formulated for this route of administration with suitable polymers, hydrophobic materials, or as a sparing soluble derivative such as, without limitation, a sparingly soluble salt.
Additionally, the compound may be delivered using a sustained-release system. Various sustained-release materials have been established and are well known by those skilled in the art. Sustained-release capsules may, depending on their chemical nature, release the compound for 24 hours or for up to several days.
Dosage
Pharmaceutical compositions suitable for use in the present invention include compositions wherein the active ingredients are contained in an amount sufficient to achieve the intended purpose, i.e., the treatment or prevent of infectious diseases. More specifically, a therapeutically effective amount means an amount of compound effective to prevent, alleviate or ameliorate symptoms of disease or prolong the survival of the subject being treated. The quantity of active component, that is the compound of this invention, in the pharmaceutical composition and unit dosage form thereof may be varied or adjusted widely depending upon the manner of administration, the potency of the particular compound and the desired concentration. Determination of a therapeutically effective amount is well within the capability of those skilled in the art. Generally, the quantity of active component will range between 0.5% to 90% by weight of the composition.
Generally, a therapeutically effective amount of dosage of active component will be in the range of about 0.1 to about 400 mg/kg of body weight/day, more preferably about 1.0 to about 50 mg/kg of body weight/day. It is to be understood that the dosages may vary depending upon the requirements of each subject and the severity of the bacterial infection being treated. In average, the effective amount of active component is about 200 mg to 800 mg and preferable 600 mg per day. The desired dose may conveniently be presented in a single dose or as divided doses administered at appropriate intervals, for example, as two, three, four or more sub-doses per day. The sub-dose itself may be further divided, e.g., into a number of discrete loosely spaced administrations; such as multiple inhalations from an insufflator or by application of a plurality of drops into the eye.
Also, it is to be understood that the initial dosage administered may be increased beyond the above upper level in order to rapidly achieve the desired plasma concentration. On the other hand, the initial dosage may be smaller than the optimum and the daily dosage may be progressively increased during the course of treatment depending on the particular situation. If desired, the daily dose may also be divided into multiple doses for administration, e.g., two to four times per day.
In cases of local administration or selective uptake, the effective local concentration of the drug may not be related to plasma concentration and other procedures know in the art may be used to determine the desired dosage amount. EXAMPLES
The compounds of this invention can be prepared in accordance with the examples discussed below. All of the starting materials are either commercially available or can be prepared by procedures that would be well known to one of ordinary skill in organic chemistry. Also, in the discussion the preparations below, the following abbreviations have the following meanings. If an abbreviation is not defined, it has its generally accepted meaning. bm = broad multiplet
BOC = te/t-butoxycarbonyl bd = broad doublet bs = broad singlet
CDI = 1,10-carbodiimidazole d = doublet dd = doublet of doublets dq = doublet of quartets dt = doublet of triplets
DMF = dimethylformamide
DMAP = dimethylaminopyridine
DMSO = dimethyl sulfoxide eq. = equivalents g = grams h = hours
HPLC = high pressure liquid chromatography
HATU = N-[(dimethylamino)-lH-l,2,3-triazolo-[4,5-b]pyridin-
1 -yl-methylene] -N-methylmethanaminium hexafluorophosphate N-oxide
LG = leaving group m = multiplet
M = molar
M% = mole percent max maximum meq milliequivalent mg milligram mL milliliter mm millimeter mmol millimol q quartet s singlet t or tr triplet TBS tributylsilyl
TFA trifluoroacetic acid THF tetrahydrofuran TLC thin layer chromatography p-TLC preparative thin layer chromatography μL microliter
N normality
MeOH methanol DCM dichloromethane HCl hydrochloric acid ACN acetonitrile
MS mass spectrometry rt room temperature
EtOAc ethyl acetate EtO ethoxy Ac acetate
NMP 1 -methyl-2-pyrrolidinone μL microliter J coupling constant NMR Nuclear magnetic resonance MHz megahertz
Hz hertz m/z mass to charge ratio min minutes Boc tert-butoxycarbonyl CBZ benzyloxycarbonyl
DCC 1 ,3 -dicyclohexylcarbodiimide PyBop benzotriazole- 1 -yl-oxy-trispyrrolidinophosphonium hexafluorophosphate
EXAMPLES
Example 1 Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide
Figure imgf000017_0001
Step 1: Preparation of l-isopropyl-5-nitro-lH-indazole l,8-Diazabicyclo[5.4.0]undec-7-ene (4.58 mL, 0.0307 mol) is added to 5- nitroindazole (4.00 g, 0.0245 mol) in DMF (50 mL) at room temperature and then stirred for 30 minutes. 2-Iodopropane (3.06 mL, 0.0307 mol) is added dropwise and the mixture allowed to react overnight at room temperature. The solvent is removed in vacuo and the residue diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg- 2SO4) and evaporated. The residue is purified by flash column chromatography (20% EtOAc/Hexanes) to give the title compound (2.45 g, 57%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1 % TFA over 10 min; 2 mL/min rate): retention time = 5.27 min; MS for C10HnN3O2 m/z 206.2(M+H)+.
Step 2: Preparation of l-isopropyl-lH-indazol-5-amine
Iron powder (2.45 g, 0.0439 mol) is added portionwise to a solution of l-isopropyl-5- nitro-lH-indazole (2.25 g, 0.0110 mol) and ammonium chloride (5.86 g, 0.110 mol) in ethanol (100 mL) and water (45 mL) at 80 0C. The mixture is vigorously stirred and heated for 45 minutes, diluted with dichloromethane (250 ml) and filtered. The organic layer is separated, dried (Mg2SO4) and evaporated to afford the title compound (1.92 g, 99%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 2.69 min; MS for C10H13N3 m/z 176.2(M+H)+.
Step 3: Preparation of (R)-methyl 2-hydroxy-3-(l-isopropyl-lH-indazol-5- ylamino)propanoate (R)-Methyl oxirane-2-carboxylate (0.875 mL, 0.00999 mol), 1-isopropyl-lH-indazol-
5-amine (1.75 g, 0.00999 mol) and lithium trifluoromethanesulfonate (1.56 g, 0.00999 mol) in acetonitrile (20 mL) are stirred and heated at 55 0C overnight. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated.
The residue is purified by flash chromatography (50% EtOAc/Hexanes) to give the title compound (1.07 g, 39%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.04 min; MS for C14H19N3O3 m/z 278.3(M+H)+.
Step 4: Preparation of (R)-methyl 3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate
1,1'Carbonyldiimidazole (0.906 g, 0.00559 mol) and (R)-methyl 2-hydroxy-3-(l- isopropyl-lH-indazol-5-ylamino)proρanoate (1.03 g 0.00373 mol) in acetonitrile (10 mL) are heated at 450C for 1 h. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated to give the title compound (1.09 g, 97%) suitable for use in the next step; HPLC (SYMMETRY Cj8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.50 min; MS for C15Hi7N3O4 m/z 304.3(M+H)+.
Step 5: Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide Ammonia (2M solution in methanol, 2mL) is added to solid (R)-methyl 3-(l- isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.589 g, 0.00194 mol) and the mixture stirred at room temperature for Ih. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound (0.149 g, 27%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.69 min; 1H
NMR (300 MHz, DMSO^) 8.04 (s, IH), 7.72 (d, 2H), 7.78-7.62 (m, 3H), 5.05-4.92 (m, 2H), 4.33 (t, J= 8.9Hz, IH), 4.03(dd, J= 6.0, 8.8 Hz IH), 1.46 (d, J= 6.6Hz, 6H); MS for C14Hi6N4O3 m/z 289.3(M+H)+.
Example 2 Preparatio of (R)-3-(l-isopropyl-lH-indazol-5-yl)-N-methyl-2- oxooxazolidine-5 -carboxamide
Figure imgf000019_0001
Methylamine (2M solution in methanol, 2mL) is added to solid (R)-methyl 3-(l- isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.502 g, 0.00166 mol) and the mixture stirred for 1 hour at room temperature. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound (0.113 g, 23%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.85 min; 1H NMR (300 MHz, DMSO-J5) 8.37 (d, J= 4.7 Hz, IH), 8.04 (s, IH), 8.04-7.66 (m, 3H), 5.06 (dd, J= 6.0, 9.6Hz, IH), 4.97 (m, IH), 4.33 (t, J= 9.3Hz, IH), 4.05 (dd, J= 6.1, 9.1Hz, IH), 2.66 (d, J= 4.4Hz, 3H), 1.46 (d, J= 6.6Hz, 6H); MS for Ci5Hi8N4O3 m/z 303.3(M+H)+. Example 3 (R)-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide
Figure imgf000019_0002
Step 1: Preparation of l-methyl-5-nitro-lH-indazole
Sodium hydride (5.40 g, 0.135 mol) is added portionwise to a solution of 5- nitroindazole (20.0 g, 0.122 mol) in DMF (250 mL) at room temperature. The reaction is stirred for 30 minutes, iodomethane (8.40 mL, 0.135 mol) added dropwise, and the mixture allowed to react overnight at room temperature. The solvent is then removed in vacuo and the residue diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated. The residue is purified by flash chromatography (20% EtOAc/Hexanes) to give the title compound (12.0 g, 55%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.29 min; MS for C8H7N3O2 m/z 178.2(M+H)+.
Step 2: Preparation of l-methyl-lH-indazol-5-amine Iron powder (5.04 g, 0.0903 mol) is added portionwise to a solution of l-methyl-5- nitro-lH-indazole (4.00 g, 0.0226 mol) and ammonium chloride (12.1 g, 0.225 mol) in ethanol (225 mL) and water (100 mL) at 8O0C. The mixture is stirred and heated for Ih, diluted with dichloromethane (500 mL) and filtered. The organic layer is separated, dried (Mg2SO4) and evaporated to afford the title compound (3.29 g, 99%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 1.06 min; MS for C1OHnN3 m/z 147.2(M+H)+.
Step 3: Preparation of (R)-methyl 2-hydroxy-3-(l-methyl-lH-indazol-5-ylamino)propanoate (R)-Methyl oxirane-2-carboxylate (0.988 mL, 0.0113 mol), l-methyl-lH-indazol-5- amine (2.00 g, 0.0113 mol) and lithium trifluoromethanesulfonate (1.76 g, 0.0113 mol) in acetonitrile (25 mL) are heated at 50 0C overnight. The reaction solution is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated. The residue is purified by flash chromatography (50% EtOAc/Hexanes) to give the title compound (0.870 g, 31%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 2.47 min; MS for C12H15N3O3 m/z 250.3(M+H)+.
Step 4: Preparation of (R)-methyl 3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate 1,1'Carbonyldiimidazole (0.849 g, 0.00524 mol) and (R)-methyl 2-hydroxy-3-(l- methyl-lH-indazol-5-ylamino)propanoate (0.870 g 0.00349 mol) in acetonitrile (15 mL) are stirred at 55 0C for 1 h. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated to give the title compound (0.780 g, 81%) suitable for use in the next step; HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 5.05 min; MS for Ci3H13N3O4 m/z 276.3(M+H)+. Step 5: Preparation of (R)-N-methyl-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide
Ammonia (2M solution in methanol, 2mL) is added to solid (R)-methyl 3-(l-methyl- lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.432 g, 0.00157M) and stirred at room temperature for Ih. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound (0.225 g, 55%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient ehαtion 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.03 min; 1H NMR (300 MHz, DMSO-rfβ) 8.02 (s, IH), 7.79-7.64 (m, 3H), 7.72 (m, 2H), 5.05-5.0 (dd, J= 6.1, 9.6Hz, IH), 4.34(t, J= 9.3Hz, IH), 4.05 (dd, J= 6.0, 9.1Hz, IH), 4.03 (s, 3H); MS for C12H12N4O3 m/z 261.3(M+H)+.
Example 4 (R)-N-methyl-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide
Figure imgf000021_0001
Methylamine (2M solution in methanol, 2 mL) is added to solid (R)-methyl 3-(l- methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.346 g, 0.00126 mol) and the mixture stirred at room temperature for Ih. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound
(0.179 g, 52%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.22 min; 1H NMR (300 MHz, DMSO-*/*) 8.37 (d, J= 4.4Hz, IH), 8.02 (s, IH), 7.79-7.64 (m, 3H), 5.07 (dd, J= 6.1, 9.3Hz, IH), 4.34 (t, J= 9.3Hz, IH), 4.06 (dd, J= 6.0, 9.1Hz, IH), 4.03 (s, 3H), 2.66 (d, J= 4.7Hz, 3H); MS for C13H14N4O3 m/z 275.3(M+H)+.
Example 5 Preparation of (R)-3-(l-ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide
Figure imgf000021_0002
Step 1: Preparation of l-ethyl-5-nitro-lH-indazole. Sodium hydride (4.05 g, 0.101 mol) is added to a solution of 5-nitroindazole (15.Og,
0.0919 mol) in DMF (200 mL) at room temperature and stirred for 30 minutes. Iodoethane (8.09 mL, 0.101 mol) is added dropwise and the mixture stirred overnight. The solvent is removed in vacuo and the residue diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated. The residue is purified by flash chromatography (20% EtOAc/Hexanes) to give the title compound (5.76 g, 30%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.73 min; MS for C9H9N3O2 rn/z 192.2(M+H)+.
Step 2: Preparation of 1 -ethyl- lH-indazol-5-amine.
Iron powder (5.17 g, 0.0926 mol) is added to a solution of l-ethyl-5-nitro-lH- indazole (4.75 g, 0.0231 mol) and ammonium chloride (12.4 g, 0.231 mol) in ethanol (175 mL) and water (75 mL) at 80 0C. The mixture is vigorously stirred and heated for 1 hour, diluted with dichloromethane (500 mL) and filtered. The organic layer is separated, dried (Mg2SO4) and evaporated to afford the title compound (4.06 g, 99%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 2.52 min; MS for C9HπN3m/z 162.2(M+H)+.
Step 3: Preparation of (R)-methyl 3-(l-ethyl-lH-indazol-5-ylamino)-2-hydroxypropanoate.
(R)-Methyl oxirane-2-carboxylate (1.11 mL, 0.0127 mol), l-ethyl-lH-indazol-5- amine (2.05 g, 0.0127 mol) and lithium trifluoromethanesulfonate (1.98 g, 0.0127 mol) in acetonitrile (25 mL) are stirred and heated at 50 0C overnight. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated. The residue is purified by flash chromatography (50% EtOAc/Hexanes) to give the title compound (0.735 g, 22%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 2.80 min; MS for C13H17N3O3InZz 264.3(M+H)+.
Step 4: Preparation of (R)-methyl 3-(l-ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate.
1,1'Carbonyldiimidazole (0.680 g, 0.00419 mol) and (R)-methyl 3-(l-ethyl-lH- indazol-5-ylamino)-2-hydroxypropanoate (0.735 g 0.00279 mol) in acetonitrile (10 mL) are heated at 550C for 1 h. The reaction is diluted with ethyl acetate, washed with water and brine, the organic layer dried (Mg2SO4) and evaporated. The residue is purified by column chromatography (50% Hexanes/EtOAc) to give the title compound (0.334 g, 41%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.07 min; MS for C14H15N3O4 m/z 290.3(M+H)+. Step 5: Preparation of (R)-3-(l-ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide
Ammonia (2M solution in methanol, 2mL) is added to solid (R)-methyl 3-(l-ethyl- lH-indazol-5-yl)~2-oxooxazolidine-5-carboxylate (0.206 g, 0.000714 mol) and the mixture stirred at room temperature for Ih. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound
(0.183 g, 94%). HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.32 min; 1H NMR (300 MHz, CDCl3) 7.96 (s, IH), 7.68 (dd, J= 1.3, 2.2Hz, IH), 7.63 (d, J= 2.2Hz, IH), 7.42 (dd, J= 1.1, 9.1Hz, IH), 6.17 (m, 2H), 5.0 (dd, J= 6.1, 9.3Hz, IH), 4.54-4.27 (m, 4H)5 1.50(t, J= 7.1Hz, 3H); MS for C13H14N4O3InZz 275.3 (M+H)+.
Example 6 Preparation of (R)-3-(l -ethyl- lH-indazol-5 -yl)-N-methyl-2-oxooxazolidine- 5-carboxamide
Figure imgf000023_0001
Methylamine (2M solution in methanol,2mL) is added to solid (R)-methyl 3-(l-ethyl- lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.1184 g, 0.000409 mol) and the mixture stirred at room temperature for Ih. The solvent is then removed in vacuo, the residue triturated with a minimum amount of methanol, and filtered to afford the title compound (0.109 g, 93%). HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.50 min; 1H NMR (300 MHz5 CDCl3) 7.96 (s, IH), 7.67 (m, IH), 7.63(d, J= 2.2Hz, IH), 7.41 (dd, J = 0.8, 9.9Hz,lH), 6.65 (bs, IH), 4.98 (dd, J= 5.8, 9.6Hz, IH), 4.41 (q, J= 7.1Hz, 2H), 4.36- 4.25 (dd, J= 3.6, 9.3Hz, 2H), 2.91 (d, J= 5.0Hz, 3H), 1.50(t, J= 7.3Hz, 3H); MS for C14Hi6N4O3m/z 289.3 (M+H)+.
Example 7 Preparation of (5R)-3-(l-sec-butyl-lH-mdazol-5-yl)-2-oxooxazolidine-5- carboxamide
Figure imgf000023_0002
Step 1: Preparation of l-.sec-butyl-lH-indazol-5-amine Iron metal (0.61 g, 10.9 mmol) is added in portions over a period of 45 minutes to a refluxing solution of l-5ec-butyl-5-nitro-lH-indazole (0.8 g, 3.65 mmol) and ammonium chloride (1.95 g, 36.5 mmol) in 36 mL of 2:1 ethanol-HaO. The rust colored mixture is refluxed for another 30 minutes and then cooled, diluted with dichloromethane. The organic layer is separated and the aqueous phase extracted with more dichloromethane. The combined dichloromethane phases are washed with water, brine, and dried (MgSO4), filtered, and concentrated to provide the title compound (0.68 g, 99%)._HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 1.82 min; 1H NMR (300 MHz, CDCl3) 0.76 (t, J = 9 Hz5 3H), 1.53 (d, J= 9 Hz, 3H), 1.80-2.10 (m, 2H), 3.69 (bs, 2H), 4.41-4.48 (m, IH), 6.83 (d, J= 9 Hz, IH), 7.22-7.25 (m, 2H), 7.79 (s, IH).
Step 2: Preparation of (2R)-methyl 3-(l-sec-butyl-lH-indazol-5-ylamino)-2- hydroxypropanoate
(R)-Methyl glycidate (0.55 g, 5.4 mmol) is added to a solution of 1 -sec-butyl- IH- indazol-5-amine (0.68 g, 3.6 mmol) and lithium trifluoromethanesulfonate (0.84 g, 5.4 mmol) in acetonitrile (12 mL) and heated to 650C for 16 hours. The reaction solution is concentrated in vacuo and the residue is purified by flash column chromatography (0-65% ethylacetate / hexanes) to obtain the title compound (0.63 g, 60%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 2.13 min; MS for C15H2IN3O3 m/z 292.0(MH-H)+.
Step 3: Preparation of (5R)-methyl 3-(l-sec-butyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxylate l,rCarbonyldiimidazole (0.7 g, 4.32 mmol) is added to a solution of (2R)-methyl 3- (l-sec-butyl-lH-indazol-5-ylamino)-2-hydroxypropanoate (0.63 g, 2.16 mmol) in acetonitrile (22 mL) and heated at 650C for 60 hours. The reaction mixture is diluted with dichloromethane, washed with dilute citric acid, dilute NaHCO3, water, brine, and dried (MgSO4), filtered and concentrated. The crude residue is subjected to flash column chromatography (0-3% MeOH / dichloromethane) to obtain the title compound (0.62 g, 90%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 3.18 min; MS for C16H19N3O4 m/z 318.2(M+H)+.
Step 4: Preparation of (5R)-3-(l-seobutyl-lH-indazol-5-yl)-2-oxooxazolidine-5- carboxamide.
A 2M solution of ammonia in methanol (2.5 mL) is added to (5R)-methyl 3-(l-sec-. butyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.16 g, 0.5 mmol) and stirred at room temperature for an hour. The reaction mixture is concentrated in vacuo to afford the title compound (0.15 g, 99%). HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time :
2.62 min; 1H NMR (300 MHz, CDCl3) 0.73 (t, J= 9 Hz, 3H), 1.55 (d, J= 6 Hz, 3H), 1.83- 2.12 (m, 2H), 4.26-4.39 (m, 2H), 4.49-4.56 (m, IH), 4.98-5.03 (m, IH), 5.66 (bs, IH), 6.63 (bs, IH), 7.43 (d, J= 9 Hz, IH), 7.60-7.67 (m, 2H), 7.99 (s, IH); MS for C15H18N4O3 m/z 303.1(M+H)+.
Example 8 Preparation of (5R)-3-(l -sec-butyl-lH-indazol-5-yl)-N-methyl-2- oxooxazolidine-5-carboxamide
Figure imgf000025_0001
A 2M solution of methylamine in methanol (2.5 mL) is added to (5R)-methyl 3-(l- sec-butyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxylate (0.16 g, 0.5 mmol) and stirred at room temperature for an hour /The reaction mixture is concentrated in vacuo to afford the title compound (0.16 g, 100%). HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 2.75 min; 1H NMR (300 MHz, CDCl3) 0.73 (t, J= 9 Hz, 3H), 1.55 (d, J= 6 Hz, 3H), 1.83- 2.12 (m, 2H), 2.90 (d, J= 3 Hz, 3H), 4.25-4.35 (m, 2H), 4.48-4.55 (m, IH), 4.96-5.01 (m, IH), 6.63 (bs, IH), 7.43 (d, J= 9 Hz, IH), 7.60-7.67 (m, 2H), 7.98 (s, IH); MS for C16H20N4O3 m/z 317.1(M+H)+.
Example 9 Preparation of (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-(l-methyl-lH-indazol- 5-yl)oxazolidin-2-one
Figure imgf000025_0002
Step 1: Preparation of ( R )-5-(hydroxymethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2- one
Lithium bis(trimethylsilyl)amide (IM in THF, 35.46 ml, 0.035 mol) is added dropwise to benzyl l-methyl-lH-indazol-5-ylcarbamate (5.Og, 0.0173 mol) in THF at -78 0C and the mixture stirred for 90 minutes. R-Glycidyl butyrate (2.76 ml, 0.019 mol) is added, the reaction mixture allowed to warm to room temperature and stirred for 14 h. The reaction is quenched with saturated aqueous ammonium chloride, diluted with water and extracted with dichloromethane. The organic layer is washed with brine, dried (Na2SO4) and evaporated. The residue is purified by flash column chromatography (20% EtOAc/Hexane) to give the title compound (2.7 g, 52%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.153 min; MS (m/z): (M+H)+ 249.3
Step 2: Preparation of (R)-(3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate
Methanesulfonyl chloride (1.25 g, 0.011 mol) is added dropwise at 0 0C to ( R )-5- (hydroxymethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2-one (2.7 g, 0.011 mol) and triethylamine (2.29 ml, 0.016 mol) in dichloromethane ( 25 ml) and the mixture stirred for 45 minutes. The reaction is quenched with saturated sodium bicarbonate, diluted with water and extracted with dichloromethane. The organic layer is washed with brine, dried (Na2SO4) and evaporated to give product used directly in the next step without purification; HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.023 min.
Step 3: Preparation of ( R )-5-(azidomethyl)-3-(l-methyl-lH-indazol-5-yl)oxazolidin-2-one (R)-(3-(l-Methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate (3.2 g, 0.0098 mol) and sodium azide (3.58g, 0.054 mol) in dimethylformamide (15 ml) is heated at 70 0C for 16 h. The reaction is diluted with water and extracted with dichloromethane. The organic layer is washed with brine, dried (Na2SO4) and evaporated. The residue is purified by flash column chromatography (20% EtOAc/Hexane) to give the title compound (1.2 g, 52%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.186 min; MS (m/z): (M+H)+ 273.1
Step 4: Preparation of (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-(l-methyl-lH-indazol-5- yl)oxazolidin-2-one
Norbornadiene (0.47 ml, 0.0044 mol) and ( R )-5-(azidomethyl)-3-(l-methyl-lH- indazol-5-yl)oxazolidin-2-one ( 0.6 g, 0.0022 mol) in dioxane (20 ml) are heated at 7O0C for 14 h. The solvent is removed under reduced pressure and the residue purified by flash column chromatography (20% EtOAc/Hexane) to give the title compound (0.18 g, 35%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.198 min; 1H NMR (300 MHz, DMSO-id) 7.92 (s,lH), 7.82 (s, IH), 7.75 (s, , IH), 7.50 ( d, J= 14.5 Hz, IH), 7.34 ( d, J= 9.6 Hz, IH), 5.07 (m, IH), 4.80 (d, J = 4.4 Hz, 2H), 4.21 (t, J= 9.3 Hz,lH), 4. 05 (s, 3H), 4.0 (dd, J= 6.04, 3.3 Hz, IH); MS (m/z); MS for C14Hi4N6O2 m/z 299.1(M+H)+. Example 10 Preparation of (R)-l-((3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidin-5- yl)methyl)-lH-l,2,3-triazole-4-carbonitrile
Figure imgf000027_0001
2-Chloroacrylonitrile (0.26 ml, 0.0033 mol) and ( R )-5.-(azidomethyl)-3-(l-methyl- lH-indazol-5-yl)oxazolidin-2-one (0.6 g, 0.0022 mol) in DMF (5 ml) are heated at 95 0C for 3 days. The solvent is removed under reduced pressure and the residue purified by PTLC (10% MeOH/DCM) to give the title compound (0.24 g, 41%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.003 min; 1H NMR (300 MHz, DMSO-c/d) 9.15 (s,lH), 8.03 (s, , IH)5 7.66 (m, 3H), 5.15 (m, IH), 4.97 (d, J= 5.2 Hz, 2H), 4.31 (t, J= 9.1 Hz,lH), 4. 03 (s, 3H), 3.97 (dd, /= 5.5, 3.8 Hz, IH); MS for C15Hi3N7O2 m/z 324.1(M+H)+.
Example 11 (R)-l-((3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)-lH- l,2,3-triazole-4-carbonitrile
Figure imgf000027_0002
Step 1: Preparation of benzyl l-isopropyl-lH-indazol-5-ylcarbamate
Benzyl chloroformate (3.59 mL, 0.0251 mol) is added dropwise to a solution of 1- isopropyl-lH-indazol-5-amine (4.00 g, 0.0228 mol) and pyridine (3.70 mL, 0.0457 mol) in dichloromethane (50 mL) at 0 0C. The reaction is allowed to warm to room temperature and stirred overnight. The solvent is evaporated in vacuo, the residue dissolved in dichloromethane and washed with saturated citric acid solution and brine. The organic layers are dried (MgSO4) and concentrated to afford the title compound (6.88 g, 97%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 5.07 min; MS for Ci8Hi9N3Oa m/z 310.4(M+H)+.
Step 2: Preparation of (R)-5-(hydroxymethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2- one Lithium bis(trimethylsilyl)amide in tetrahydrofuran (1.0M solution in THF, 24.2 mL,
0.0242 mol) is added to a solution of benzyl l-isopropyl-lH-indazol-5-ylcarbamate (3.75 g, 0.0121 mol) in tetrahydrofuran (35 mL) at -78 0C and stirred for 30 minutes. (R)-(-)-Glycidyl butyrate (1.89 mL, 0.0133 mol) is added, the mixture allowed to warm to room temperature and stirred overnight. The reaction is diluted with dichloromethane, washed with saturated ammonium chloride solution and brine, dried (MgSO4), and concentrated. The residue is purified by column chromatography (20% Hexanes/EtOAc) to afford the title compound (1.43 g, 43%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.84 min; MS for C14H17N3O3 m/z 276.3(M+H)+.
Step 3: Preparation of (R)-(3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl methanesulfonate
Methanesulfonyl chloride (0.402 mL, 0.00519 mol) is added to (R)-5- (hydroxymethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2-one (1.43 g, 0.00519 mol) and triethylamine (1.09 mL, 0.00779 mol) in dichloromethane (10 mL) at 0 0C. The reaction is stirred for 30 minutes, diluted with dichloromethane, washed with saturated sodium bicarbonate solution and brine, dried (MgSO4), and concentrated to afford the title compound. The material is used directly in the next step without purification; HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.55 min; MS for C15H19N3O5S m/z 354.4(M+H)+.
Step 4: Preparation of (R)-5-(azidomethyl)-3-(l-isopropyl-lH-indazol-5-yl)oxazolidin-2-one Sodium azide (1.69 g, 0.0260 mol) and (R)-(3-(l -isopropyl-lH-indazol-5-yl)-2- oxooxazolidin-5-yl)methyl methanesulfonate (1.84 g, 0.00519 mol) in dimethylformamide (10 mL) are heated at 70 0C overnight. The reaction is diluted with EtOAc, washed with water and brine, dried (MgSO4), and concentrated. The residue is purified by column chromatography (50% EtOAc/Hexanes) to afford the title compound (1.13 g, 73%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.84 min; MS for Ci4Hi6N6O2 m/z 301.3(M+H)+.
Step 5: Preparation of (R)-l-((3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)- lH-l,2,3-triazole-4-carbonitrile
2-Chloroacrylonitrile (0.0800 mL, 0.000999 mol) and (R)-5-(azidomethyl)-3-(l- isopropyl-lH-indazol-5-yl)oxazolidin-2-one (0.200 g, 0.000666 mol) in dimethylformamide (2 mL) are heated at 85 0C for 3 days. The solvent is removed in vacuo and the residue purified by preparative thin layer chromatography (10% MeOH/dichloromethane) to afford the title compound (0.100 g, 43%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.68 min; 1H NMR (300 MHz, CDCl3) 8.40 (s, IH), 7.95 (s, IH), 7.56-7.39 (m, 3H), 5.12-
5.06 (m, IH), 4.88-4.77 (m, 3H), 4.28 (t, J= 9.3 Hz, IH), 3.97 (dd, J= 6.0, 9.3 Hz, IH), 1.56 (d, J= 2.5 Hz, 6H); MS for C17H17N7O2 m/z 352.4(M+H)+
Example 12 (5R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-(l-sec-butyl-lH-indazol-5- yl)oxazolidin-2-one
Figure imgf000029_0001
Dichloroacetaldehyde (0.087 g, 0.77 mmol) andp-toluenesulfonyl hydrazide (0.14 g, 0.77 mmol) are stirred at 0 0C in MeOH (2.6 mL) and acetic acid (0.022 mL) for an hour. To this mixture is added (5S)-5-(aminomethyl)-3-(l-5ιec-butyl-lH-indazol-5-yl)oxazolidin-2-one (0.22 g, 0.77 mmol) in triethylamine (0.54 mL, 3.85 mmol) and DMF (4.5 mL). After stirring at room temperature for 48 hours, the reaction mixture is concentrated in vacuo. The residue is purified by preparative TLC (5% methanol-dichloromethane) to obtain the title compound (0.04 g, 15%). HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 2.59 min; 1H NMR (300 MHz, CDCl3) 0.71 (t, J= 9 Hz, 3H), 1.53 (d, J= 6 Hz, 3H), 1.81-2.07 (m, 2H), 3.96- 4.01 (m, IH), 4.20 (t, J= 9 Hz, IH), 4.46-4.53 (m, IH), 4.79 (d, J= 6 Hz, 2H), 5.03-5.08 (m, IH), 7.36-7.49 (m, 3H), 7.74 (s, IH), 7.80 (s, IH), 7.94 (s, IH); MS for C17H20N6O2 m/z 341.3(MH-H)+.
Example 13 (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((4-methyl-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one
Figure imgf000029_0002
Dichloroacetone (0.124 mL, 0.00129 mol) is added to a solution ofp- toluenesulfonylhydrazide (0.240 g, 0.00129 mol) and acetic acid (0.0370 mL, 0.000644 mol) in methanol (5 mL) at room temperature. The resulting slurry is allowed to react at room temperature for 1 h to generate N'-( 1,1 -dichloropropan-2-ylidene)-4- methylbenzenesulfonohydrazide. (S)-5-(Aminomethyl)-3-(l-isopropyl-lH-indazol-5- yl)oxazolidin-2-one (0.500 g, 0.00129 mol), as a TFA-salt, and triethylamine (0.359 mL, 0.00258 mol) in dimethylformamide (10 mL) is added and the mixture stirred overnight at room temperature. The solvent is then removed in vacuo and the residue purified by preparative thin layer chromatography (10%MeOH/dichloromethane) to afford the title compound (0.163 g, 37%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.07 min; 1H NMR (300 MHz, DMSO-J6) 8.04 (s, IH), 7.87, (s, IH), 7.77 (d, J= 9.1 Hz, IH),
7.66 (d, J= 1.4 Hz3 IH), 7.57 (dd, J= 2.2, 9.1 Hz, IH), 5.13-5.05 (m, IH), 4.95 (m, IH), 4.75 (d, J= 5.2 Hz, 2H), 4.27 (t, J= 9.1 Hz, IH), 3.91 (dd, J= 5.8, 6.3 Hz, IH), 2.22 (s, 3H), 1.45 (d, J= 6.6 Hz, 6H); MS for C17H2oN602m/z 341.4(M+H)+.
Example 14 Preparation of (R)-3-(l-iIsopropyl-lH-indazol-5-yl)-5-((4-fluoro-lH-l,2,3- triazol- 1 -yl)methyl)oxazolidin-2-one
Figure imgf000030_0001
Step 1: Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((4-tributylstannyl-lH-l,2,3- triazol- 1 -yl)methyl)oxazolidin-2-one
Ethynyltributylstannane (0.462 mL, 0.00160 mol) and (R)-5-(azidomethyl)-3-(l- isopropyl-lH-indazol-5-yl)oxazolidin-2-one (0.480 g, 0.00160 mol) in toluene (3 mL) are heated to 70 0C for 3 days. The reaction is evaporated and the residue purified by column chromatography (1.75% MeOH/dichloromethane) to afford the title compound (0.678 g, 69%); HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 7.08 min; MS for C28H44N6O2SnInZz 616.4(M+H)+.
Step 2: Preparation of (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((4-fluoro-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one
Selectfluor fluorinating agent (l-Chloromethyl-4-fluoro-l,4- diazoniabicyclo[2.2.2]octane bis(tetrafluoroborate)) (0.399 g, 0.00113 mol) and (R)-3-(l- isopropyl-lH-indazol-5-yl)-5-((4-tributylstannyl-lH-l,2,3-triazol-l-yl)methyl)oxazolidin-2- one (0.660 g, 0.00107 mol) in acetonitrile (10 mL) are stirred at room temperature for 2 days. The reaction is diluted with water, extracted into dichloromethane, dried (MgSO4), and concentrated. The residue is purified by preparative HPLC to afford the title compound (0.070 g, 19%); HPLC (SYMMETRY Q8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%- 98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 4.16 min; 1H NMR (300 MHz, DMSO-^6) 8.22 (s, IH), 8.19 (s, IH), 7.81 (s, IH), 7.59 (d, J= 8.8 Hz, IH), 7.26 (dd, J= 7.1, 8.5 Hz, IH), 5.24-5.16 (m, IH), 5.0 (m, IH), 4.86 (d, J= 4.7 Hz, 2H), 4.18 (t, J= 8.8 Hz, IH), 3.82 (dd, J= 5.5, 8.8 Hz, IH), 1.46 (d, J= 6.6 Hz, 6H); MS for C16H17N6O2F m/z 345.4(M+H)+. Example 15 Preparation of (R)-3-(l-isopropyl-lH-mdazol-5-yl)-5-((lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one
Figure imgf000031_0001
Dichloroacetaldehyde, hydrate (0.169 g, 0.00129 mol) is added to a solution ofp- toluenesulfonylhydrazide (0.240 g, 0.00129 mol) and acetic acid (0.0370 mL, 0.000644 mol) in methanol (5 mL) at room temperature. The mixture is stirred for 1 h to generate N'-(l,l- dichloropropan-2-ylidene)-4-methylbenzenesulfonohydrazide. (S)-5-(aminomethyl)-3-(l- isopropyl-lH-indazol-5-yl)oxazolidin-2-one (0.500 g, 0.00129 mol), as a TFA-salt, and triethylamine (0.359 mL, 0.00258 mol) in dimethylformamide (10 mL), is added in one portion and the mixture stirred overnight at room temperature. The solvent is removed from the reaction in vacuo and the residue purified by preparative thin layer chromatography (10%MeOH/dichloromethane) to afford the title compound (0.060 g, 14%); HPLC (SYMMETRY C18 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 10 min; 2 mL/min rate): retention time = 3.97 min; 1H NMR (300 MHz, DMSO-J6) 8.18 (s, IH), 8.04 (s, IH), 7.87, (s, IH), 7.77 (s, IH), 7.67 (d, J= 10.7 Hz, IH), 7.56 (dd, J= 2.2, 9.3 Hz, IH), 5.15-5.11 (m, IH), 4.96 (m, IH), 4.84 (d, J= 4.9 Hz, 2H), 4.29 (t, J= 9.3 Hz, IH), 3.93 (dd, J= 5.5, 9.3 Hz, IH), 1.45 (d, J= 6.6 Hz, 6H); MS for C16H18N6O2m/z 327.4(M+H)+.
Example 16 Preparation of (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-((S)-l-sec-butyl-lH- indazol-5-yl)oxazolidin-2-one
Figure imgf000031_0002
Dichloroacetaldehyde (0.087 g, 0.77 mmol) andp-toluenesulfonyl hydrazide (0.14 g, 0.77 mmol) are stirred at room temperature in MeOH (2.6 mL) and acetic acid (0.022 mL) for an hour. To this mixture is added (5S)-5-(arninomethyl)-3-((S)-l-see-butyl-lH-indazol-5- yl)oxazolidin-2-one (0.31 g, 0.77 mmol) in triethylamine (0.54 mL, 3.85 mmol) and DMF (4.5 mL). After stirring at room temperature for 16 hours, the reaction mixture is diluted with dichloromethane and washed with water and brine, dried (MgSO^, filtered and concentrated. The crude residue is purified by preparative TLC (5% MeOH-10% acetonitrile- dichloromethane) to afford the title compound (0.043 g, 16%); HPLC (SYMMETRY C,8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 2.60 min; 1H NMR (300 MHz, CDCl3) _ 0.72 (t, J= 9 Hz, 3H), 1.54 (d, J= 6 Hz, 3H), 1.83-2.09 (m, 2H), 3.97-4.02 (m, IH), 4.20 (t, J= 9 Hz, IH), 4.49-4.57 (m, IH), 4.79 (d, J= 6 Hz, 2H), 5.04-5.09 (m, IH), 7.36-7.50 (m, 3H), 7.75 (s, IH), 7.81 (s, IH), 7.96 (s, IH); MS for C7H20N6O2 m/z 341.3(M+H)+.
Example 17 Preparation of (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-((R)-l-sec-butyl-lH- indazol-5-yl)oxazolidin-2-one
Figure imgf000032_0001
Dichloroacetaldehyde (0.085 g, 0.75 mmol) and/?-toluenesulfonyl hydrazide (0.14 g, 0.75 mmol) are stirred at room temperature in MeOH (2.5 mL) and acetic acid (0.022 mL) for an hour. To this mixture is added (5S)-5-(aminomethyl)-3-((R)-l-5rec-butyl-lH-indazol-5- yl)oxazolidin-2-one (0.3 g, 0.75 mmol) in triethylamine (0.52 mL, 3.75 mmol) and DMF (4.4 mL). After stirring at room temperature for 16 hours, the reaction mixture is diluted with dichloromethane and washed with water and brine, dried (MgSO4), filtered and concentrated. The crude residue is purified by preparative TLC (5% MeOH- 10% acetonitrile- dichloromethane) to afford the title compound (0.046 g, 18%). HPLC (SYMMETRY Ci8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1 % TFA over 6 min; 2 mL/min rate): retention time = 2.69 min; 1H NMR (300 MHz, CDCl3) _ 0.72 (t, J= 9 Hz, 3H), 1.54 (d, J= 6 Hz, 3H), 1.81-2.11 (m, 2H), 3.99-4.02 (m, IH), 4.20 (t, J- 9 Hz, IH), 4.47-4.54 (m, IH), 4.79 (d, J= 6 Hz, 2H), 5.04-5.09 (m, IH), 7.36-7.50 (m, 3H), 7.74 (s, IH), 7.81 (s, IH), 7.96 (s, IH); MS for C17H20N6O2 m/z 341.3(M+H)+.
Example 18 Prepartion of 5-(S)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-((S)-l-5ec-butyl-7- fluoro-lH-indazol-5-yl)oxazolidin-2-one
Figure imgf000032_0002
Dichloroacetaldehyde (0.07 g, 0.62 mmol) and/7-toluenesulfonyl hydrazide (0.116 g, 0.62 mmol) are stirred at 0 0C in MeOH (2.0 mL) and acetic acid (0.018 mL) for an hour. To this mixture is added (5S)-5-(aminomethyl)-7-fluoro-3-((S)-l-sec-butyl-lΗ-indazol-5- yl)oxazolidin-2-one (0.26 g, 0.62 mmol) in triethylamine (0.43 mL, 3.1 mmol) and DMF (3.5 mL). After stirring at room temperature for 18 hours, the reaction mixture is diluted with dichloromethane and washed with water and brine, dried (MgSO4), filtered and concentrated. The crude residue is purified by preparative TLC (5% MeOH-10% acetonitrile- dichloromethane) to afford the title compound (0.03 g, 14%); HPLC (SYMMETRY C!8 3.5 μM, 4.6 x 30 mm column; gradient elution 2%-98% MeCN with 0.1% TFA over 6 min; 2 mL/min rate): retention time = 3.01 min; 1H NMR (300 MHz, CDCl3) _ 0.95 (t, J= 9 Hz, 3H), 1.75 (d, J= 6 Hz, 3H), 2.01-2.32 (m, 2H), 4.16-4.21 (m, IH), 4.40 (t, J= 9 Hz, IH),
4.96-5.01 (m, 3H), 5.26-5.30 (m, IH), 7.39-7.45 (m, 2H), 7.59 (d, J= 15 Hz, IH), 7.98 (d, J= 15 Hz, IH), 8.17 (s, IH); MS for C17Hi9FN6O2 m/z 359.1(M+H)+.

Claims

CLAIMSWe claim:
1. A compound of formula I
Figure imgf000034_0001
I or a pharmaceutically acceptable salt thereof wherein: W is CC=O)NHR1, CC=S)NHR1, or CH2het; Y is H, or F; R1 is (a) H, (d) Ciβalkyl, or
(e) OC1-6alkyl; X is (a) H,
(d) Ci-6alkyl, or
(e) C3-7cycloalkyl; Z is
(f) H,
(g) halo,
(h) C1-6alkyl, (i) OC1-6alkyl, or (j) SC1-6alkyl; het is a five-(5) or six-(6) membered heterocyclic ring having 1-4 heteroatoms selected from the group consisting of oxygen, sulfur, and nitrogen within the ring, wherein ezch carbon atom I het is optionally substituted with
Figure imgf000034_0002
C2-4alkenyl, C2-4alkynyl, halo, OR2, CN, NO2, NR2R2, oxo, CF3, OCF3, C(=O)C1-4alkyl, OC(=O)C,.4alkyl, or C(=O)OR2; at each occurrence, C^alkyl is optionally substituted with aryl, het, halo, CN, OR2, NO2, N3, NR2R2, or C].4alkyl; and R2 is H or C1-4alkyl.
2. A compound of claim 1 wherein Z is H.
3. A compound of claim 2 wherein W is CC=O)NHR1.
4. A compound of claim 3 wherein R1 is H or CH3.
5. A compound of claim 2 wherein W is CEbhet.
6. A compound of claim 2 wherein W is 1 ,2,3-triazole-l -yl methyl.
7. A compound of claim 1 wherein X is methyl, ethyl, propyl, isopropyl, butyl, iso- butyl, or sec-butyl.
8. A compound of claim 1 which is:
(1) (i?)-3-(l-isopropyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide, (2) (R)S-(I -isopropyl-lH-indazol-5-yl)-N-methyl-2-oxooxazolidine-5-carboxamide,
(3) (i?)-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(4) (R)-N-methyl-3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(5) (R)-3-(l-ethyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(6) (R)-3-(l-ethyl-lH-indazol-5-yl)-N-methyl-2-oxooxazolidine-5-carboxamide, (7) (5i?)-3-(l-5ec-butyl-lH-indazol-5-yl)-2-oxooxazolidine-5-carboxamide,
(8) (S^-S-Cl-Λ'ec-butyl-lH-indazol-S-yO-N-methyl^-oxooxazolidine-S-carboxamide,
(9) (^^-((lΗ-l^^-triazol-l-yOmethyO-S-Cl-methyl-lH-indazol-S-yOoxazolidin^-one,
(10) (R)-l-((3-(l-methyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)-lH-l,2,3- triazole-4-carbonitrile, (11) CR)-I -((3-(I -isopropyl-lH-indazol-5-yl)-2-oxooxazolidin-5-yl)methyl)-lH-l ,2,3- triazole-4-carbonitrile,
(12) (5i?)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-(l-sec-butyl-lH-indazol-5-yl)oxazolidin-2- one,
(13) (i?)-3-(l-isopropyl-lΗ-indazol-5-yl)-5-((4-methyl-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one,
(14) (R)-3-(l-isopropyl-lΗ-indazol-5-yl)-5-((4-fluoro-lH-l,2,3-triazol-l- yl)methyl)oxazolidin-2-one,
(15) (R)-3-(l-isopropyl-lH-indazol-5-yl)-5-((lH-l,2,3-triazol-l-yl)methyl)oxazolidin-2- one, (16) (R)-5-((lH-l ,2,3-triazol-l -yl)methyl)-3-((S)-l -sec-butyl-lH-indazol-5-yl)oxazolidin- 2-one,
(17) (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-((R)-l-sec-butyl-lH-indazol-5-yl)oxazolidin- 2-one, or
(18) (R)-5-((lH-l,2,3-triazol-l-yl)methyl)-3-((5)-l-sec-butyl-7-fiuoro-lH-indazol-5- yl)oxazolidin-2-one.
9. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.
10. A method for treating bacteria infections comprising administering to a mammal being treated a pharmaceutically effective amount of the compound of claim 1.
11. The method of claim 10 wherein the compound of claim 1 is administered orally, parenterally, topically, rectally, or intranasally.
12. The method of claim 10 wherein said compound is administered in an amount of from about 0.1 to about 100 mg/kg of body weight/day.
13. The method of claim 10 wherein said compound is administered in an amount of from about 1 to about 50 mg/kg of body weight/day.
14. The bacteria infection of claim 10 which is ear infections, eye infections, respiratory tract infections, skin and skin structure infections, bacterial endocarditis, osteomyelitis, endocarditis or diabetic foot.
15. The bacteria infection of claim 10 which is caused by gram-positive bacteria, gram negative bacteria, anaerobic organisms, and acid-fast organisms.
16. The bacteria infection of claim 10 which is caused by bacteria comprising staphylococci, streptococci, Enterococci, Haemophilus, Moraxella, bacteroides, Clostridia, Mycobacteria, or Chlamydia.
17. The bacteria of claim 16 wherein staphylococci is S. aureus and S. epidermidis; wherein streptococci is S. pneumoniae of S. pyogenes; wherein Enterococci is E.faecalis; wherein Haemophilus is H. influenzae; wherein Moraxella is M. catarrhalis; and wherein Mycobacteria is M. tuberculosis; ox Mycobacterium avium.
15. The bacteria infections of claim 10 which is caused by multi-drug resistant S. aureus.
PCT/IB2007/000259 2006-02-01 2007-01-22 Indazole oxazolidinones as antibacterial agents WO2007088478A1 (en)

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WO2011138751A2 (en) 2010-05-04 2011-11-10 Pfizer Inc. Heterocyclic derivatives as alk inhibitors
WO2012069535A1 (en) * 2010-11-23 2012-05-31 Ge Healthcare Limited Radioiodination method

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WO2004074282A1 (en) * 2003-02-24 2004-09-02 Pharmacia & Upjohn Company Llc Antibacterial indolone oxazolidinones, intermediates for their preparation and pharmaceutical compositions containing them

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US20040044052A1 (en) * 2002-02-25 2004-03-04 Thomas Richard Charles N-Aryl-2-oxazolidinone-5-carboxamides and their derivatives
WO2004074282A1 (en) * 2003-02-24 2004-09-02 Pharmacia & Upjohn Company Llc Antibacterial indolone oxazolidinones, intermediates for their preparation and pharmaceutical compositions containing them

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2011138751A2 (en) 2010-05-04 2011-11-10 Pfizer Inc. Heterocyclic derivatives as alk inhibitors
WO2012069535A1 (en) * 2010-11-23 2012-05-31 Ge Healthcare Limited Radioiodination method

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