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WO1990011294A1 - Vaccination et procedes contre des maladies resultant des reponses pathogeniques par des populations de cellules t specifiques - Google Patents

Vaccination et procedes contre des maladies resultant des reponses pathogeniques par des populations de cellules t specifiques Download PDF

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Publication number
WO1990011294A1
WO1990011294A1 PCT/US1990/001516 US9001516W WO9011294A1 WO 1990011294 A1 WO1990011294 A1 WO 1990011294A1 US 9001516 W US9001516 W US 9001516W WO 9011294 A1 WO9011294 A1 WO 9011294A1
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Prior art keywords
vaccine
cell
cells
sequence
cell receptor
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PCT/US1990/001516
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English (en)
Inventor
Mark D. Howell
Steven W. Brostoff
Dennis J. Carlo
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The Immune Response Corporation
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Family has litigation
First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=27406453&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=WO1990011294(A1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Priority to SU5001756A priority Critical patent/RU2138512C1/ru
Priority to AT90905821T priority patent/ATE100111T1/de
Priority to DE69006018T priority patent/DE69006018T3/de
Priority to KR1019910701170A priority patent/KR920700674A/ko
Priority to RO92-200175A priority patent/RO110397B1/ro
Application filed by The Immune Response Corporation filed Critical The Immune Response Corporation
Priority to EP90905821A priority patent/EP0463101B2/fr
Priority to AU53567/90A priority patent/AU648753C/en
Publication of WO1990011294A1 publication Critical patent/WO1990011294A1/fr
Priority to FI914432A priority patent/FI914432A0/fi
Priority to NO913722A priority patent/NO309164B1/no
Priority to BG95337A priority patent/BG61164B1/bg
Priority to NO20002425A priority patent/NO20002425D0/no

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    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00—Medicinal preparations containing peptides
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
    • C07K14/70503—Immunoglobulin superfamily
    • C07K14/7051—T-cell receptor (TcR)-CD3 complex
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P29/00—Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00—Antineoplastic agents
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00—Drugs for immunological or allergic disorders
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00—Medicinal preparations containing antigens or antibodies
    • A61K2039/51—Medicinal preparations containing antigens or antibodies comprising whole cells, viruses or DNA/RNA
    • A61K2039/53—DNA (RNA) vaccination
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00—Medicinal preparations containing antigens or antibodies
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2800/00—Detection or diagnosis of diseases
    • G01N2800/10—Musculoskeletal or connective tissue disorders
    • G01N2800/101—Diffuse connective tissue disease, e.g. Sjögren, Wegener's granulomatosis
    • G01N2800/102—Arthritis; Rheumatoid arthritis, i.e. inflammation of peripheral joints

Definitions

  • This invention relates to the immune system and, more specifically, to methods of modifying pathological immune responses.
  • T lymphocytes Both effect and regulate the cell- mediated response resulting eventually in the elimination of the antigen.
  • T lymphocytes A variety of T cells are involved in the cell-mediated response. Some induce particular B cell clones to proliferate and produce antibodies specific for the antigen. Others recognize and destroy cells presenting foreign antigens on their surfaces. Certain T cells regulate the response by either stimulating or suppressing other cells.
  • T cells as the primary regulators of the immune system, directly or indirectly effect such autoimmune pathologies.
  • T cell lymphomas Numerous diseases are believed to result from autoimmune mechanisms. Prominent among these are rheumatoid arthritis, systemic lupus erythematosus, multiple sclerosis, Type I diabetes, myasthenia gravis and pemphigus vulgaris. Autoimmune diseases affect millions of individuals world-wide and the cost of these diseases, in terms of actual treatment and expenditures and lost productivity, is measured in billions of dollars annually. At present, there are no known effective treatments for such autoimmune pathologies. Usually, only the symptoms can be treated, while the disease continues to progress, often resulting in severe debilitation or death. In other instances, lymphocytes replicate inappropriately and without control. Such replication results in a cancerous condition known as a lymphoma. Where the unregulated lymphocytes are of the T cell type, the tumors are termed T cell lymphomas. As with other malignancies, T cell lymphomas are difficult to treat effectively.
  • the present invention provides vaccines and a means of vaccinating a mammal so as to prevent or control specific T cell mediated pathologies or to treat the unregulated clonal replication of T cells.
  • the vaccine is composed of a T cell receptor (TCR) or a fragment thereof corresponding to a TCR present on the surface of T cells mediating the pathology.
  • the vaccine fragment can be a peptide corresponding to sequences of TCRs characteristic of the T cells mediating said pathology.
  • Means of determining appropriate amino acid sequences for such vaccines are also provided.
  • the vaccine is administered to the mammal in a manner that induces an immune response directed against the TCR of T cells mediating the pathology. This immune response down regulates or deletes the pathogenic T cells, thus ablating the disease pathogenesis.
  • the invention additionally provides a specific ⁇ - chain variable region of the T cell receptor, designated V ⁇ 17, which is central to the pathogenesis of rheumatoid arthritis (RA). Also provided are means to detect, prevent and treat RA.
  • V ⁇ 17 a specific ⁇ - chain variable region of the T cell receptor
  • the invention also provides a specific region of a T cell receptor useful for the treatment of multiple sclerosis (MS). Also provided are means to detect, prevent and treat MS.
  • MS multiple sclerosis
  • the invention relates to vaccines and their use for preventing or ameliorating T cell-mediated pathologies, such as autoimmune diseases and T cell lymphomas.
  • Vaccination provides a specific and sustained treatment which avoids problems associated with other potential avenues of therapy.
  • T cell-mediated pathology refers to any condition in which an inappropriate T cell response is a component of the pathology.
  • the term is intended to include both diseases directly mediated by T cells and those, such as myasthenia gravis, which are characterized primarily by damage resulting from antibody binding, and also diseases in which an inappropriate T cell response contributes to the production of those antibodies.
  • the term is intented to encompass both T cell mediated autoimmune diseases and unregulated clonal T cell replication.
  • substantially the sequence when referring to an amino acid sequence means the described sequence or other sequences having any additions, deletions or substitutions which do not substantially effect the ability of the sequence to elicit an immune response against the desired T cell receptor sequence.
  • a portion of the described immunizing sequence can be used so long as it is sufficiently characteristic of the desired T cell receptor as to cause an effective immune response against desired T cell receptors but not against undesired
  • T cell receptors Such variations in the sequence can easily be made, e.g. by synthesizing an alternative sequence, and tested, e.g. by immunizing a mammal, to determine its effectiveness.
  • fragment is intended to cover such fragments in conjunction with or combined with additional sequences or moieties, as for example where the peptide is coupled to other amino acid sequences or to a carrier.
  • fragment and peptide can, therefore, be used interchangeably since a peptide will be the most common fragment of the T cell receptor.
  • Each fragment of the invention can have an altered sequence, as described above for the term “substantially the sequence.”
  • fragment or portion of the T cell receptor does not mean that the composition must be derived from intact T cell receptors.
  • fragment or portions can be produced by various means well-known to those skilled in the art, such as for example manual or automatic peptide synthesis or methods of cloning.
  • corresponding to means that the peptide fragment has an amino acid sequence which is sufficiently homologous to the TCR sequence to stimulate an effective regulatory response in the individual.
  • the sequence need not be identical to the TCR sequence, however, as shown in Examples II and III.
  • immunologically effective an amount of the T cell receptor or fragment thereof which, is effective to elicit an immune response to prevent or treat a T cell mediated pathology or an unregulated T cell clonal replication in the individual. Obviously, such amounts will vary between species and individuals depending on many factors. For example, higher doses will generally be required for an effective immune response in a human compared with a mouse.
  • V ⁇ 17 refers to a specific ⁇ -chain variable region of a T cell receptor (TCR).
  • TCR T cell receptor
  • V ⁇ 17 has the amino acid sequence MSNQVLCCWLCFLGANTVDGGITQSPKYLFRKEGQN VTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFP LTVTSAQKNPTAFYLCASS.
  • the hypervariable and junctional regions are most useful for vaccines.
  • One hypervariable region of V ⁇ 17 especially useful is the CDR2 region which has the amino acid sequence SQIVNDFQK.
  • variable region can be joined with any D and J segment of the TCR. Further, immunogenicly representative fragments of V ⁇ 17 are also included in the definition of "V ⁇ 17.”
  • binding partner means a compound which is reactive with a TCR.
  • this compound will be a Major Histocompatibility Antigen (MHC) but can be any compound so long as when the TCR is bound in the normal course, T cell activation or proliferation occurs.
  • MHC Major Histocompatibility Antigen
  • ligand means any molecule that reacts to form a complex with another molecule.
  • selective binding means that a molecule binds to one type of molecule but not substantially to other types of molecules.
  • V ⁇ 17 “selective binding” indicates binding to V ⁇ 17 containing TCRs but not substantially to other TCRs which lack V ⁇ 17.
  • the immune system is the primary biological defense of the host (self) against potentially pernicious agents (non- self). These pernicious agents may be pathogens, such as bacteria or viruses, as well as modified self cells, including virus-infected cells, tumor cells or other abnormal cells of the host. Collectively, these targets of the immune system are referred to as antigens.
  • CD4+ T Cells helper T Cells. These CD4+ T cells in turn stimulate B cells, primed for antibody synthesis by antigen binding, to proliferate and secrete antibody. This secreted antibody binds to the antigen and facilitates its destruction by other immune mechanisms.
  • CD4+ T cells provide stimulatory signals to cytotoxic (CD8+) T cells which recognize and destroy cellular targets (for example, virus infected cells of the host).
  • T cells owe their antigen specificity to the T cell receptor (TCR) which is expressed on the cell surface.
  • TCR T cell receptor
  • the TCR is a heterodimeric glycoprotein, composed of two polypeptide chains, each with a molecular weight of approximately 45 kD. Two forms of the TCR have been identified. One is composed of an alpha chain and a beta chain, while the second consists of a gamma chain and a delta chain.
  • Each of these four TCR polypeptide chains is encoded by a distinct genetic locus containing multiple discontinuous gene segments. These include variable (V) region gene segments, junction (J) region gene segments and constant (C) region gene segments. Beta and delta chains contain an additional element termed the diversity (D) gene segment. (Since D segments and elements are found in only some of the TCR genetic loci, and polypeptides, further references herein to D segments and elements will be in parentheses to indicate the inclusion of these regions only in the appropriate TCR chains.
  • V(D)J refers either to VDJ sequences of chains which have a D region or refers to VJ sequences of chains lacking D regions.
  • V(D)J refers either to VDJ sequences of chains which have a D region or refers to VJ sequences of chains lacking D regions.
  • single V, (D) and J gene segments are rearranged to form a functional gene that determines the amino acid sequence of the TCR expressed by that cell. Since the pool of V, (D) and J genes which may be rearranged is multi-membered and since individual members of these pools may be rearranged in virtually any combination, the complete TCR repertoire is highly diverse and capable of specifically recognizing and binding the vast array of binding partners to which an organism may be exposed. However, a particular T cell will have only one TCR molecule and that TCR molecule, to a large degree if not singly, determines the specificity of that T cell for its binding partner.
  • EAE allergic encephalomyelitis
  • MBP myelin basic protein
  • EAE-inducing T cells are specific, not only for the same antigen (MBP), but also usually for a single epitope on that antigen.
  • TCRs of EAE-inducing T cells has revealed restricted heterogeneity in the structure of these disease-associated receptors.
  • 33 MBP- reactive T cells only two alpha chain V region gene segments and a single alpha chain J region gene segment were utilized. Similar restriction of beta chain TCR gene usage was also observed in this T cell population. Only two beta chain V region segments and two J region gene segments were found. More importantly, approximately eighty percent of the T cell clones had identical amino acid sequences across the region of beta chain V-D-J joining.
  • MBP-specific T cells reduced the susceptibility of mice to subsequent EAE induction (Acha-Orbea et al., Cell 54:263- 273 (1988) and Urban et al., Cell 54:577-592 (1988)). Similar protection has been demonstrated in rat EAE with monoclonal antibody reactive with an unidentified idiotypic determinant of the TCR on MBP specific T cells (Burns et al., J. Exp. Med. 169:27-39 (1989)). While passive antibody therapy appears to have some ameliorative effect on EAE susceptibility, it is fraught with potential problems. The protection afforded is transient, thus requiring repeated administration of the antibody.
  • the administration of extant derived regulatory T cells overcomes the major obstacle of passive antibody therapy; it permits a regulatory response in vivo of prolonged duration.
  • it requires in vitro cultivation with attenuated disease-inducing T cells to develop clones of such regulatory T cells, a costly and labor intensive process.
  • MHC non-identity among individuals makes this a highly individualized therapeutic strategy. Regulatory clones need to be derived for each individual patient and then re-administered only to that patient to avoid potential graft versus host reactions.
  • T cell clones Direct vaccination with attenuated disease-inducing T cell clones also has been employed as a therapy for EAE.
  • MBP-specific T cells capable of transferring disease, have been attenuated by gamma irradiation or chemical fixation and used to vaccinate naive rats.
  • vaccinated animals exhibited resistance to subsequent attempts at EAE induction (Lider et al., supra; see Cohen and Weiner, Immunol. Today 9:332-335 (1988) for review).
  • the effectiveness of such vaccination is inconsistent and the degree of protection is highly variable.
  • T cells contain a multitude of different antigens which induce an immune response when the whole T cell is administered as a vaccine.
  • the present invention provides an effective method of immunotherapy for T cell mediated pathologies, including autoimmune diseases, which avoids many of the problems associated with the previously suggested methods of treatment.
  • T cell mediated pathologies including autoimmune diseases
  • the host's own immune system is mobilized to suppress the autoaggressive T cells.
  • the suppression is persistent and may involve any and all immunological mechanisms in effecting that suppression.
  • This multi-faceted response is more effective than the uni-dimensional suppression achieved by passive administration of monoclonal antibodies or extant- derived regulatory T cell clones.
  • the vaccines of the present invention comprise TCRs of T cells that mediate autoimmune diseases.
  • the vaccines can be whole TCRs substantially purified from T cell clones, individual T cell receptor chains (for example, alpha, beta, etc.) or portions of such chains, either alone or in combination.
  • the vaccine can be homogenous, for example, a single peptide, or can be composed of more than one type of peptide, each of which corresponds to a different portion of the TCR. Further, these peptides can be from distinct TCRs wherein both TCRs contribute to the T cell mediated pathology.
  • the immunizing peptide can have the amino acid sequence SGDQGGNE when the subject has multiple sclerosis. Any immunogenic portion of this peptide can be effective. Thus, amino acid substitutions can be made which do not destroy the immunogenicity of the peptide. Additionally, this peptide can be linked to a carrier to further increase its immunogenicity.
  • T cell receptors or fragments of the TCR which contain V ⁇ 17 can be used to immunize an individual having rheumatoid arthritis to treat or prevent the disease.
  • the immune response generated in the individual can neutralize or kill T cells having V ⁇ 17 and, thus, prevent or treat the deleterious effects of V ⁇ 17-bearing T cells.
  • V ⁇ 17 is common to T cell receptors on pathogenic T cells mediating autoimmune diseases in general, such vaccines can also be effective in ameliorating such other autoimmune diseases.
  • the vaccines comprise peptides of varying lengths corresponding to the TCR or portions thereof.
  • the peptides can be produced synthetically or recombinantly, by means well known to those skilled in the art.
  • the peptide vaccines correspond to regions of the TCR which distinguish that TCR from other nonpathogenic TCRs. Such specific regions can be located within the various region(s) of the respective TCR polypeptide chains, especially a short sequence spanning the V(D)J junction, thus restricting the immune response solely to those T cells bearing this single determinant.
  • the vaccines are administered to a host exhibiting or at risk of exhibiting an autoimmune response.
  • Definite clinical diagnosis of a particular autoimmune disease warrants the administration of the relevant diseasespecific TCR vaccines.
  • Prophylactic applications are warranted in diseases where the autoimmune mechanisms precede the onset of overt clinical disease (for example, Type I Diabetes).
  • individuals with familial history of disease and predicted to be at risk by reliable prognostic indicators could be treated prophylactically to interdict autoimmune mechanisms prior to their onset.
  • TCR vaccines can be administered in many possible formulations, in pharmacologically acceptable mediums.
  • the peptide can be conjugated to a carrier, such as KLH, in order to increase its immunogenicity.
  • the vaccine can be administered in conjunction with an adjuvant, various of which are known to those skilled in the art.
  • a booster can be provided.
  • the vaccines are administered by conventional methods, in dosages which are sufficient to elicit an immunological response, which can be easily determined by those skilled in the art.
  • Appropriate peptides to be used for immunization can be determined as follows. Disease-inducing T cell clones reactive with the target antigens are isolated from affected individuals.
  • T cells are obtained preferably from the site of active autoaggressive activity such as a lesion in the case of pemphigus vulgaris, central nervous system (CNS) in the case of multiple sclerosis or synovial fluid or tissue in the case of rheumatoid arthritis, or alternatively from blood of affected individuals.
  • the TCR genes from these autoaggressive T cells are then sequenced.
  • Polypeptides corresponding to TCRs or portions thereof that are selectively represented among disease inducing T cells (relative to non-pathogenic T cells) can then be selected as vaccines and made and used as described above.
  • the vaccines can comprise anti idiotypic antibodies which are internal images of the peptides described above.
  • Methods of making, selecting and administering such anti-idiotype vaccines are well known in the art. See, for example, Eichmann, et al., CRC Critical Reviews in Immunology 7:193-227 (1987), which is incorporated herein by reference.
  • T cell lymphoma is another T cell pathology which would be amenable to this type of treatment.
  • Application of this technology in the treatment of T lymphoma would be conducted in virtually identical fashion. In one respect, however, this technology is more readily applied to T cell proliferative disease since the isolation of the pathogenic T cells is more easily accomplished.
  • the technology is applied in the manner described herein. Specifically, the TCR genes of the T lymphomas are sequenced, appropriate regions of those TCRs are identified and used as vaccines.
  • the vaccines can comprise single or multiple peptides, and can be administered in pharmacologically acceptable formulations with or without adjuvants by conventional means.
  • MBP-reactive T cells causative of multiple sclerosis (MS) have not previously been identified, though MBP-reactive T cells have been proposed to play a role due to the clinical and histologic similarities between MS and EAE.
  • MBP-reactive, encephalogenic T cells show striking conservation of ⁇ -chain VDJ amino acid sequence, despite known differences in MHC restriction and MBP-peptide antigen specificity.
  • This invention is premised on the observation that a human myelin basic protein (MBP) -reactive T cell line, derived from an MS patient, has a TCR ⁇ -chain with a VDJ amino acid sequence homologous with that of ⁇ -chains from MBP-reactive T cells mediating pathogenesis in experimental allergic encephalomyelitis (EAE), an animal model of MS.
  • EAE experimental allergic encephalomyelitis
  • Rheumatoid arthritis is a T cell mediated autoimmune disease.
  • the invention describes oligoclonal infiltrates of activated V ⁇ 17 T cells in the synovium of rheumatoid arthritis patients. The presence of these T cells in the diseased tissue of all patients examined, their oligoclonality, and the cytotoxic activity of one such T cell for synovial adherent cells, demonstrates a central role for Vfil7 bearing T cells in the pathogenesis of RA.
  • TCR T cell receptor
  • IL-2R+ IL-2 receptor positive
  • PCR polymerase chain reaction
  • V ⁇ 17 bearing T cell clone has been isolated from one of the synovial tissue specimens and its in vitro cytotoxicity for synovial adherent cells supports the direct involvement of V ⁇ 17 T cells in RA.
  • the invention provides the extremely important discovery that a specific variable region of the ⁇ -chain of the TCR, designated V ⁇ 17, is closely associated with rheumatoid arthritis in human subjects. This discovery allows for the detection, prevention and treatment of rheumatoid arthritis using the methodology set out in this invention. Similar therapeutic approaches set out above for EAE can be applied to rheumatoid arthritis by those skilled in the art.
  • the invention provides a method of diagnosing or predicting susceptibility to rheumatoid arthritis in an individual comprising detecting T cells having the ⁇ -chain variable region designated V ⁇ 17 in a sample from the individual, the presence abnormal levels of V ⁇ 17-containing T cells indicating rheumatoid arthritis or susceptibility to rheumatoid arthritis.
  • the V ⁇ 17 containing T cell can be qualitatively or quantitatively compared to that of a normal individual.
  • diagnosis can be performed by detecting a portion of the V ⁇ 17 which does not occur on non-rheumatoid arthritis associated ⁇ - chain variable region T-cell receptors.
  • the V ⁇ 17 can be detected, for example, by contacting the V ⁇ 17 with a detectable ligand capable of specifically binding to V ⁇ 17.
  • detectable ligands are known in the art, e.g. an enzyme linked antibody.
  • nucleotide probes complementary to V ⁇ 17 encoding nucleic acid sequences can be utilized to detect V ⁇ 17 containing T cells, as taught in Example IX.
  • the invention also provides a method of preventing or treating rheumatoid arthritis comprising preventing the attachment of a V ⁇ 17 containing T-cell receptor to its binding partner.
  • attachment is prevented by binding a ligand to V ⁇ 17.
  • attachment is prevented by binding a ligand to the V ⁇ 17 binding partner. Attachment can be prevented by known methods, e.g. binding an antibody to V ⁇ 17 or the binding portion to physically block attachment.
  • the invention also provides a method of preventing or treating rheumatoid arthritis in an individual comprising cytotoxicly or cytostaticly treating V ⁇ 17 containing T- cells in the individual.
  • the V ⁇ 17 containing T-cells are treated with a cytotoxic or cytostati ⁇ agent which selectively binds V ⁇ 17.
  • the agent can be an antibody attached to a radioactive or chemotherapeutic moiety. Such attachment and effective agents are well known in the art. See, for example, Harlow, E. and Lane, Antibodies, A Laboratory Manual, Cold Spring Harbor Laboratory, 1988, which is incorporated herein by reference.
  • the invention also provides the extremely important discovery that a specific TCR sequence, SGDQGGNE, is closely associated with multiple sclerosis in human subjects. This discovery allows for the detection, prevention and treatment of multiple sclerosis using the methodology set out in this invention. Similar therapeutic approaches set out herein for EAE can be applied to multiple sclerosis by those skilled in the art.
  • the invention provides a method of diagnosing or predicting susceptibility to multiple sclerosis in an individual comprising detecting T cells having substantially the SGDQGGNE sequence in a sample from the individual, the presence of the sequence indicating multiple sclerosis or susceptibility to multiple sclerosis.
  • the sequence can be detected, for example, by contacting it with a detectable ligand.
  • ligands are known in the art, e.g. an enzyme linked antibody.
  • nucleotide probes complementary to the nucleic acid encoding the sequence can be utilized to detect T cells as, taught in Example IX.
  • the invention also provides a method of preventing or treating multiple sclerosis comprising preventing the attachment of a T-cell receptor containing substantially the SGDQGGNE sequence to its binding partner.
  • attachment is prevented by binding a ligand to to the sequence.
  • attachment is prevented by binding a ligand to the binding partner. Attachment can be prevented by known methods, e.g. binding an antibody to the sequence to physically block attachment.
  • the invention also provides a method of preventing or treating multiple sclerosis in an individual comprising cytotoxicly or cytostaticly treating T cells containing substantially the SGDQGGNE sequence in the individual.
  • T-cells are treated with a cytotoxic or cytostatic agent which selectively binds the sequence.
  • the agent can be an antibody attached to a radioactive or chemotherapeutic moiety.
  • Vaccinations were conducted with a T cell receptor peptide whose sequence was deduced from the DNA sequence of a T cell receptor beta gene predominating among EAE- inducing T cells of BIO.PL/L mice.
  • the DNA sequence was that reported by Urban, et al., supra, which is incorporated herein by reference.
  • the equivalent sequence in the rat has been reported to be: SSD-SSNTE (Burns et al., J. Exp. Med.
  • the peptide was desalted by Sephadex G-25 (Pharmacia Fine Chemicals, Piscataway, NJ) column chromatography in 0.1 M acetic acid and the solvent was subsequently removed by two cycles of lyophilization. A portion of the peptide was conjugated to keyhole limpet hemocyanin (KLH) with glutaraldehyde at a ratio of 7.5 mgs of peptide per mg of KLH. The resulting conjugate was dialyzed against phosphate buffered saline (PBS).
  • KLH keyhole limpet hemocyanin
  • PBS phosphate buffered saline
  • Vaccines used in these studies consisted of free VDJ peptide and also of VDJ peptide conjugated to KLH. These were dissolved in PBS and were emulsified with equal volumes of either (1) incomplete Freund's adjuvant (IFA) or (2) complete Freund's adjuvant (CFA) made by suspending 10 mg/ml heat killed desiccated Mycobacterium tuberculosis H37ra (Difco Laboratories, Detroit, MI) in IFA. Emulsions were administered to 8-12 week old female Lewis rats in a final volume of 100 microliters per animal (50 ⁇ l in each of the hind footpads). 5 ⁇ g of unconjugated VDJ peptide were administered per rat.
  • IFA incomplete Freund's adjuvant
  • CFA complete Freund's adjuvant
  • KLH-VDJ conjugate was administered at a dose equivalent to 10 ⁇ g of KLH per rat. Twenty-nine days later each rat was challenged with 50 ⁇ g of guinea pig myelin basic protein in complete Freund's adjuvant in the front footpads. Animals were monitored daily beginning at day 9 for clinical signs of EAE and were scored as described above. The results are presented in Table I. As can be seen, not only was there a reduced incidence of the disease in the vaccinated individuals, but in those which did contract the disease, the severity of the disease was reduced and/or the onset was delayed. The extent of protection varied with the vaccine formulation, those including CFA as the .adjuvant demonstrating the greatest degree of protection.
  • VDJ peptide used in the previous examples was synthesized according to the sequence of TCR ⁇ chain molecules found on EAE-inducing T cells in B10. PL mice. In addition, peptides were synthesized and tested which correspond to sequences found on encephalitogenic T cells in Lewis rats. These VDJ sequences are homologous with that of B10.PL mice, but not identical.
  • the rat peptides were synthesized according to the DNA sequences reported by Burns, et al. and Chluba, et al., Eur. J. Immunol. 19:279- 284 (1989). The sequences of these three peptides designated IR1, 2 and 3, are shown below, aligned with the B10. PL mouse sequence used in Examples I through III (VDJ). VDJ S G D A G G G Y E
  • IR9b A S S D - S S N T E The preparation, administration and evaluation of these vaccines were conducted as described in Examples I through III with the following exceptions: 50 ⁇ g of the individual VDJ peptides were incorporated into vaccine formulations containing CFA; neither vaccinations in IFA nor vaccinations with peptides conjugated to KLH were conducted. Control animals were untreated prior to MBP challenge as in Example III or were vaccinated with emulsions of PBS and CFA to assess the protective effect of adjuvant alone. The results are shown in Table II below.
  • V ⁇ 8 is the most common ⁇ chain gene family used by encephalitogenic T cells in both rats and mice.
  • a peptide was synthesized based on a unique DNA sequence found in the V ⁇ 8 gene, and which is not found among other rat V ⁇ genes whose sequences were reported by Morris, et al., Immunogenetics 27:174-179 (1988).
  • the sequence of this V ⁇ 8 peptide, designated IR7, is:
  • V ⁇ 8 peptide was tested in the Lewis rat model of EAE (Example I) as described in Examples II and III. 50 ⁇ g of peptide were tested in CFA. Vaccinations in IFA or with peptide-KLH conjugates were not conducted. The results of these studies are shown in Table III.
  • the results of vaccinations conducted with the rat V ⁇ 8 peptide are similar to those observed with the mouse and rat IRl, 2 and 3 peptides. Delayed onset as well as decreased severity and duration of disease was observed in one animal. One animal was completely protected.
  • Vaccination with J region peptides A peptide was synthesized which corresponds to the J a gene segment, TA39, found among both rat and mouse encephalitogenic T cell receptors.
  • the sequence of this peptide, designated IR5 is:
  • Vaccinations were conducted with a mixture of TCR peptides. This mixture contained 50 ⁇ g of each of the peptides IR1, 2, 3 and 5 (the three rat VDJ peptides and the rat J ⁇ TA39 peptide).
  • MBP-reactive T cell lines were established from peripheral blood mononuclear cells (PBMC) of nine chronic progressive MS patients and two healthy controls. Cells were maintained in culture by regular stimulation with purified human MBP and irradiated-autologous PBMC for three days followed by four days in IL-2 containing medium.
  • PBMC peripheral blood mononuclear cells
  • TCR ⁇ -chain genes from MBP-reactive T cell lines
  • T cells were harvested from log phase cultures and RNA was prepared, amplified with the V ⁇ 16mer primer and nested CB primers for 55 cycles as described in Example IX.
  • TCR ⁇ -chain sequences of human MBP-reactive T cells V ⁇ 16mer amplified TCR ⁇ -chain genes from human MBP- reactive T cell lines were sequenced using the C ⁇ seq primer. Amplification products were gel purified, base denatured and sequenced from the C ⁇ seq primer. Readable
  • DNA sequence was obtained from 5 of these lines, indicating that predominant T cell clones had been selected by long term in vitro passage.
  • One of these sequences, from the Re cell line (Table VI) possessed a ⁇ -chain VDJ amino acid sequence that shared five of the first six and six of nine total residues with the ⁇ -chain VDJ amino acid sequence conserved among MBP reactive, encephalogenic T cells in the B10.
  • PL mouse model of EAE This sequence was not present among the predominant TCR rearrangements found in the remaining four human MBP reactive T cell lines.
  • RNAs were reversed transcribed and amplified in 20 cycle stage I reactions with the V ⁇ 16mer and C ⁇ ext primers. One ⁇ l aliquots of these stage I reactions were reamplified for 35 cycles with the V ⁇ Re and C ⁇ int primers. One ⁇ l aliquots of these reactions were analyzed by Southern blot hybridization with a 32 P-labeled human C ⁇ probe.
  • Immunogenic peptides having the sequence SGDQGGNE can be synthesized as shown in Example II and used to immunize human subjects by methods demonstrated in Example III.
  • Synovial tissue specimens were obtained from radiographically proven rheumatoid arthritis patients undergoing joint replacement therapy. Activated T cells were selected using magnetic beads and antibodies reactive with the human IL2-R ( ⁇ IL2-R) as follows. Synovial tissue was digested for 4 hrs at 37°C in RPMI + 10% Fetal Bovine Serum (FBS) containing 4 mg/ml collagenase (Worthington Biochemical, Freehold, NJ) and 0.15 mg/ml DNAse (Sigma, St. Louis, MO.). Digests were passed through an 80-mesh screen and single cells were collected by Ficoll density gradient centrifugation.
  • FBS Fetal Bovine Serum
  • the cells remaining in the initial suspension were further incubated 30 minutes at 0°C with 5 ⁇ g/ml monoclonal mouse IgG reactive with the human T cell IL2-R (Coulter Immunology, Hialeah, FL). Cells were washed and selected with magnetic beads as above. Beads from the IgG preadsorption and the IL2-R antibody selection were immediately resuspended in acidified-guanidinium-phenol-chloroform and RNA prepared as described in Chonezynski and Sacchi, Anal. Biochem. 162:156 (1987), which is incorporated herein by reference.
  • RNAS were prepared without in vitro culture of the cells and the accompanying bias that may be induced, they are expected to accurately reflect T cell distributions in synovial tissue at the time of surgical removal. Only half of the mlgG and ⁇ IL2-R beads from patient 1012 were immediately processed for RNA. The remainder were cultured for 5 days in RPMI 1640, 5% FBS, 20% HL-1 (Ventrex Laboratories Inc., Portland, ME), 25mM HEPES, glutamine, antibiotics and 20% LAK supernatant (Allegretta et al., Science, 247:718 (1990)), which is incorporated by reference herein, as a source of IL-2. RNA was extracted from cultures of the ⁇ IL2-R beads (1012IL2.d5), but not from the 1012mIgG sample as no viable cells were present at the end of the 5 day culture.
  • a T cell clone was derived from the Ficoll pellet of patient 1008.
  • the cells in the pellet were cultured at 2 x 10 6 /ml in media without IL-2 for two weeks.
  • Non-adherent cells from this culture were cloned by limiting dilution onto autologous synovial cell monolayers.
  • a CD4+ T cell clone 1008.8 was obtained and adapted to culture by regular stimulation with autologous synovial monolayers for 3 days in media without IL-2 followed by a 4 day culture in medium with LAK supernatant. Lysis of Synovial Adherent Cells by 1008.8
  • TCR ⁇ -chain genes were amplified with several combinations of the primers shown in Table VIII.
  • This primer has been used to amplify TCR ⁇ -chains from more than 25 different human T cell clones, lines or primary tissue preparations.
  • a spectrum of V ⁇ genes has been sequenced from these amplified DNAs, argues against a significant bias of the primer for certain V ⁇ families.
  • PCR amplification with the V ⁇ 16mer primer facilitates analysis of T cell populations for which a priori knowledge of V ⁇ gene usage is unavailable.
  • T cell receptor ⁇ -chain genes were amplified in two- stage amplification reactions with nested pairs of the primers shown in Table VIII. RNAs were reverse transcribed for 1 hour at 42°C with 40pmol of the C ⁇ ext primer in a 12 ⁇ l reaction using conditions described by Hart et al., The Lancet, p. 596 (1988), included by reference herein . Reactions were diluted with a master mix containing 40 pmols of the V ⁇ 16mer primer, nucleotides and reaction buffer as above but without MgCl 2 to give a final Mg +2 concentration of 3.6 mM.
  • Samples were denatured for 15 minutes at 95°C, 1 unit of heat stable recombinant DNA polymerase (Cetus Corporation, Emeryville, CA, AmplitaqTM) was added and 20 cycles of PCR conducted. Each cycle consisted of a 1 min denaturation at 95°C, a two minute annealing step and a two minute extension at 72°C. The first two cycles were annealed at 37°C and 45°C, respectively, and the remainder at 50°C.
  • 1 unit of heat stable recombinant DNA polymerase (Cetus Corporation, Emeryville, CA, AmplitaqTM) was added and 20 cycles of PCR conducted. Each cycle consisted of a 1 min denaturation at 95°C, a two minute annealing step and a two minute extension at 72°C. The first two cycles were annealed at 37°C and 45°C, respectively, and the remainder at 50°C.
  • stage II amplification reactions (Cetus, Gene-Amp KitTM) containing 100 pmols of the CBint primer and 100 pmols of the V ⁇ 8, V ⁇ 17 or 5'C ⁇ primers or 700 pmols of the V ⁇ 16mer primer.
  • Stage II amplifications were conducted as above with a 50°C annealing temperature and without the 37°C and 45°C ramping.
  • RNA samples from 1012IL2.d5 and 1008.8 cultures were amplified with the V ⁇ 16mer and C ⁇ ext primers in stage I reactions and with the V ⁇ 16mer and the C ⁇ int primer in 35 cycle stage II reactions.
  • Reaction products purified from low melting agarose gel slices with Gene Clean glass beads (Biolol, San Diego, CA), were base denatured and sequenced from the C ⁇ seq primer with T7 polymerase (Sequenase, (United States Biochem, Cleveland, OH).
  • a predominate V ⁇ sequence, corresponding to a single V ⁇ 17 rearrangement Table IX, was clearly readable in the 1012IL2.d5 sample. Other, less frequent rearrangements were detected as faint, uninterpretable background bands in the sequencing gels.
  • V ⁇ 17 rearrangement in this sample reflects in vivo clonal expansion of V ⁇ 17+ T cells in this patient.
  • V ⁇ 17 TCR DNA was amplified from magnetic bead samples derived from each of the seven RA patients. Ethidium bromide staining of electrophoresed reaction products revealed greater V ⁇ 17 amplification in four of the ⁇ IL2-R samples than in the corresponding mlgG controls. This enrichment was not a product of the isolation procedure, since amplification of VB8 TCRs failed to show differences between MIgG and IL2- R samples.
  • V ⁇ 17 rearrangements from two of the ⁇ IL2-R RNA preparations were amplified with the V ⁇ 17 and CBint primer pair and the reaction products sequenced with the C ⁇ seq primer.
  • Samples 1014 and 1015 contained single sequences (Table IX), which, like the 1012IL2.d5 sample, demonstrates clonal expansion of VB17 T cells in vivo. In contrast, direct sequencing of the rearrangements amplified with the V ⁇ 8 specific primer was not possible due to significant heterogeneity in the ⁇ -chain product.
  • V ⁇ 17 has the amino acid sequence MSNQVLCCWLCFLGANTVDG GITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGD IAEGYSVSREKKESFPLTVTSAQKNPTAFYLCASS.
  • HLA-DR analysis in rheumatoid arthritis patients was performed as follows. DNA from each patient was prepared by boiling 10 5 synovial cells in 200 ⁇ l dH 2 O. Ten ⁇ l were amplified for 35 cycles in a 100 ⁇ l reaction (Cetus, Gene Amp KitTM) containing 100 pmols of each of the DR ⁇ PCR primers (Table X). One-tenth ⁇ l of this reaction was reamplified in 10 ⁇ ls containing only the DR ⁇ 2 primer and 17 pmol of ⁇ 32P-dCTP as the sole source of dCTP for 10 cycles.
  • Reactions were spiked with 200 uM dCTP and chased for 2 cycles.
  • the resulting negative strand probes were hybridized to slot blots containing 10 pmol of the HLA-DR allele specific oligos (positive strands) using conditions previously described by Amor et al., J. Immunol. 138:1947 (1987), which is incorporated herein by reference.
  • the slots were washed twice for 20 minutes with tetramethylammoniumchloride (Wood et al., Proc. Natl. Acad. Sci. USA 82:1585 (1985)) which is incorporated herein by reference) at 65-68°C and exposed to X-ray film.
  • Each of the patients in this study possessed at least one allele of the HLA-DR genes, DR4w4, DR1, DR4w14 or DR4w15, that are known to predispose for RA (Table X).
  • T cell receptors containing V ⁇ 17 or fragments thereof which are immunogenic or can be made immunogenic can be used to immunize human subjects by methods demonstrated by
  • Example VII Such immunizations can result in an effective immune response.

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Abstract

La présente invention concerne des vaccins et des moyens de vaccination d'un mammifère de manière à empêcher ou contrôler des pathologies induites par des cellules T spécifiques ou pour traiter la réplication non régulée de cellules T. Le vaccin se compose d'un récepteur de cellules T (TCR) ou d'un fragment de celui-ci correspondant à un TCR présent à la surface des cellules T induisant la pathologie. Des moyens de détermination de séquences d'acides aminés appropriés pour de tels vaccins sont également prévus. Le vaccin est administré au mammifère pour qu'il induise une réponse immune dirigée contre le TCR des cellules T induisant la pathologie. Cette réponse immune réduit ou élimine les cellules T pathogéniques, stoppant ainsi la pathogénèse de la maladie. L'invention concerne en outre une région variable à chaîne β spécifique du récepteur de cellules T, désignée Vβ17, qui est centrale à la pathogénèse du rhumatisme articulaire (RA). Sont également prévus des moyens de détection, de prévention et de traitement du rhumatisme articulaire.
PCT/US1990/001516 1989-03-21 1990-03-21 Vaccination et procedes contre des maladies resultant des reponses pathogeniques par des populations de cellules t specifiques WO1990011294A1 (fr)

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AU53567/90A AU648753C (en) 1989-03-21 1990-03-21 Vaccination and methods against diseases resulting from pathogenic responses by specific T cell populations
AT90905821T ATE100111T1 (de) 1989-03-21 1990-03-21 Impfung und methoden gegen krankheiten, die von pathologischen reaktionen der spezifischen tzellen abstammen.
DE69006018T DE69006018T3 (de) 1989-03-21 1990-03-21 Impfung und methoden gegen krankheiten, die von pathologischen reaktionen der spezifischen t-zellen abstammen.
KR1019910701170A KR920700674A (ko) 1989-03-21 1990-03-21 특정 t세포 집단에 의한 발명 반응으로부터 야기되는 질병에 대한 예방접종 및 방법
RO92-200175A RO110397B1 (ro) 1989-03-21 1990-03-21 Vaccin pentru prevenirea sau tratarea unor boli care rezulta din raspunsuri patogene, prin populatii de celule t specifice, procedeu de obtinere si metode de diagnostic si tratament cu acesta
SU5001756A RU2138512C1 (ru) 1989-03-21 1990-03-21 Вакцина для профилактики или лечения опосредованной т-клетками патологии или нерегулируемой репликации клонами т-клеток, способ выделения вакцины, способ диагностирования или прогнозирования восприимчивости к ревматоидному артриту или рассеянному склерозу, способ профилактики или лечения ревматоидного артрита или рассеянного склероза и содержащий последовательность sgdqggne пептид, являющийся агентом для обнаружения, профилактики или лечения рассеянного склероза
EP90905821A EP0463101B2 (fr) 1989-03-21 1990-03-21 Vaccination et procedes contre des maladies resultant des reponses pathogeniques par des populations de cellules t specifiques
FI914432A FI914432A0 (fi) 1989-03-21 1991-09-20 Vaccin och foerfaranden mot sjuk- domar foerorsakade av patogen respons av specifika t-cellpopulationer.
NO913722A NO309164B1 (no) 1989-03-21 1991-09-20 Fremgangsmåte for fremstilling av vaksine
BG95337A BG61164B1 (bg) 1989-03-21 1991-10-17 Ваксиниране и методи за въздействие на заболявания, резултат от патогенни отговори на т-клетъчно специфични популации
NO20002425A NO20002425D0 (no) 1989-03-21 2000-05-10 FremgangsmÕte for diagnose av, eller forutsigelse av mottagelighet for en T-cellemedient sykdom hos et individ

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AU7650096A (en) 1997-02-13
AU648753B2 (en) 1994-05-05
NO309164B1 (no) 2000-12-18
CA2046909A1 (fr) 1990-09-22
BG61164B1 (bg) 1997-01-31
RU2138512C1 (ru) 1999-09-27
EP0463101B2 (fr) 2003-03-19
NO20002425L (no) 1991-09-20
ES2062519T5 (es) 2003-07-16
AU6893094A (en) 1994-11-24
ES2062519T3 (es) 1994-12-16
JP3472297B2 (ja) 2003-12-02
AU6892994A (en) 1994-10-27
RO110397B1 (ro) 1996-01-30
DE69006018T2 (de) 1994-05-11
AU672313B2 (en) 1996-09-26
KR920700674A (ko) 1992-08-10
AU5356790A (en) 1990-10-22
DK0463101T3 (da) 1994-03-14
EP0463101A1 (fr) 1992-01-02
AU6892894A (en) 1994-11-03
FI914432A0 (fi) 1991-09-20
NO913722L (no) 1991-09-20
NO913722D0 (no) 1991-09-20
DE69006018T3 (de) 2004-01-15
BG95337A (bg) 1993-12-24
EP0463101B1 (fr) 1994-01-12
JPH04506512A (ja) 1992-11-12
DE69006018D1 (de) 1994-02-24
NO20002425D0 (no) 2000-05-10
AU6892694A (en) 1994-10-27

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