TW202216762A - TGFBR2-ECD mutant, and fusion protein comprising same and use thereof - Google Patents
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Abstract
Description
本發明涉及生物醫藥領域。具體而言,本發明提供了一種多肽,其為TGF-β RⅡ胞外區(TGFBR2-ECD)突變體,以及包含TGFBR2-ECD突變體的融合蛋白,以及其在製備藥物中的用途。The present invention relates to the field of biomedicine. Specifically, the present invention provides a polypeptide, which is a TGF-β RII extracellular domain (TGFBR2-ECD) mutant, a fusion protein comprising the TGFBR2-ECD mutant, and its use in the preparation of medicines.
轉化生長因數-β (TGF-β)具有TGF-β1、TGF-β2和TGF-β3三種高同源亞型,它們共同屬於TGF-β超家族。TGF-β與膜上受體的高親和力結合,可啟動下游SMAD蛋白磷酸化通路參與疾病發生發展進程。Transforming growth factor-beta (TGF-beta) has three highly homologous isoforms, TGF-beta1, TGF-beta2, and TGF-beta3, which together belong to the TGF-beta superfamily. The high-affinity binding of TGF-β to receptors on the membrane can initiate the downstream SMAD protein phosphorylation pathway to participate in the occurrence and development of diseases.
在腫瘤發展進程中,TGF-β調控腫瘤細胞增殖、分化和遷移等相關基因的異常表達而參與增強腫瘤組織血管生成、細胞轉移和間充質轉化等癌症進程,還參與人體免疫監測系統抑制而最終發揮促癌效應。TGF-β的異常表達改變了腫瘤組織微環境,其在體內的高表達水準與多種腫瘤不良預後相關。在結直腸癌中,TGF-β下游通路的SMAD活化可啟動不良預後相關生物標誌物的表達,TGF-β1和TGF-β3在患者體內的高表達與其不良預後呈顯著相關。研究表明,TGF-β可促進Treg細胞生成,抑制CD8+ T細胞以及NK細胞的啟動和分化,也參與抑制第一代CAR-T和CD137共刺激信號的CAR-T增殖。此外,TGF-β與多種炎症和自身免疫性疾病密切相關:在炎症性腸病模型中,TGF-β通過誘導Th17細胞的大量分化,而導致Th17細胞相關自身免疫性疾病的惡化;在哮喘模型中,IL-13通過誘導產生TGF-β參與患者肺部纖維化進程。In the process of tumor development, TGF-β regulates the abnormal expression of genes related to tumor cell proliferation, differentiation and migration, and participates in the enhancement of tumor tissue angiogenesis, cell metastasis and mesenchymal transformation and other cancer processes. ultimately exert a cancer-promoting effect. The abnormal expression of TGF-β changes the tumor tissue microenvironment, and its high expression level in vivo is associated with poor prognosis of various tumors. In colorectal cancer, SMAD activation of downstream pathways of TGF-β can initiate the expression of biomarkers associated with poor prognosis, and high expression of TGF-β1 and TGF-β3 in patients is significantly associated with poor prognosis. Studies have shown that TGF-β can promote the generation of Treg cells, inhibit the initiation and differentiation of CD8+ T cells and NK cells, and also participate in the proliferation of CAR-T that inhibits first-generation CAR-T and CD137 costimulatory signals. In addition, TGF-β is closely related to a variety of inflammatory and autoimmune diseases: in models of inflammatory bowel disease, TGF-β leads to the exacerbation of Th17 cell-related autoimmune diseases by inducing massive differentiation of Th17 cells; in asthma models , IL-13 participates in the process of pulmonary fibrosis in patients by inducing the production of TGF-β.
TGF-β信號轉導由TGF-β受體複合物介導。TGF-β受體複合物是由一個TGF-β Ⅰ型受體(TGF-βRⅠ)同源二聚體和一個TGF-β Ⅱ型受體(TGF-βRⅡ)同源二聚體組成。研究發現,兩個TGF-βRⅡ的胞外區(TGFBR2-ECD)與TGF-β二聚體直接結合形成複合物。因此,TGFBR2-ECD可以用來開發TGF-β Trap,起到捕獲TGF-β的作用,從而阻斷TGF-β信號通路。TGF-beta signaling is mediated by the TGF-beta receptor complex. The TGF-β receptor complex is composed of a TGF-β receptor type I (TGF-βRI) homodimer and a TGF-β type II receptor (TGF-βRⅡ) homodimer. The study found that two extracellular domains of TGF-βRⅡ (TGFBR2-ECD) directly combined with TGF-β dimer to form a complex. Therefore, TGFBR2-ECD can be used to develop TGF-β Trap, which acts to trap TGF-β, thereby blocking the TGF-β signaling pathway.
在腫瘤治療中,對腫瘤微環境的TGF-β抑制已是一個公認的有效治療靶點,但在臨床研究中單用TGF-β抑制劑療效不佳。現有技術中已經開發了一些包含TGF-β Trap的雙功能分子,例如包含抗PD-L1抗體和TGF-β Trap (參見例如WO2018/205985和WO2015/118175)的雙功能分子,可以同時阻斷TGF-β信號通路並抑制免疫檢查點,用於癌症治療。其中,WO2015/118175的方案採用野生型TGFBR2-ECD作為TGF-β Trap,其與PD-L1抗體融合形成的雙功能分子在生產過程中易發生較嚴重的降解斷裂,極大影響了藥物成藥性開發,對藥物的有效性和安全性也產生了挑戰。WO2018/205985的方案通過截去野生型TGFBR2-ECD的N端易斷裂區,而獲得了更為穩定的雙功能分子,但是截短型的TGFBR2-ECD在體內環境中可能會因為缺乏N端的原始序列而形成與野生型蛋白差異較大的結構,而存在一些未知風險。In tumor treatment, the inhibition of TGF-β in the tumor microenvironment has been recognized as an effective therapeutic target, but the efficacy of single TGF-β inhibitor in clinical studies is not good. Some bifunctional molecules comprising TGF-β Trap have been developed in the prior art, such as bifunctional molecules comprising anti-PD-L1 antibody and TGF-β Trap (see e.g. WO2018/205985 and WO2015/118175), which can block TGF simultaneously -β signaling pathway and inhibit immune checkpoints for cancer therapy. Among them, the scheme of WO2015/118175 uses wild-type TGFBR2-ECD as TGF-β Trap, and the bifunctional molecule formed by fusion with PD-L1 antibody is prone to serious degradation and breakage during the production process, which greatly affects the development of druggability. , which also poses challenges to the efficacy and safety of drugs. The scheme of WO2018/205985 obtains a more stable bifunctional molecule by truncating the N-terminal breakable region of wild-type TGFBR2-ECD, but the truncated TGFBR2-ECD may be in vivo due to the lack of the original N-terminal Sequence and form a structure that is quite different from the wild-type protein, and there are some unknown risks.
本申請要求2020年9月23日提交的,題為「TGFBR2-ECD突變體及包含其的融合蛋白與應用」的第202011011927.7號中國專利申請的優先權,該申請的內容整體援引加入本文。This application claims the priority of Chinese Patent Application No. 202011011927.7 filed on September 23, 2020, entitled "TGFBR2-ECD mutants and fusion proteins comprising the same, and applications", the content of which is incorporated herein by reference in its entirety.
本發明提供一種TGF-βRⅡ胞外區的突變體,其能夠結合TGF-β,並且在N端帶有一個或多個氨基酸突變,從而與野生型TGF-βRⅡ胞外區相比,所述突變體包含在易斷裂區域的氨基酸突變和/或親水性的改進。The present invention provides a mutant of the extracellular region of TGF-βRII, which is capable of binding TGF-β and has one or more amino acid mutations at the N-terminus, so that the mutant is more efficient than the wild-type TGF-βRII extracellular region. The body contains amino acid mutations and/or improvements in hydrophilicity in the scissile region.
在一實施方案中,本發明的突變體包含SEQ ID NO: 1的氨基酸序列,並且在其N端第1-24位氨基酸中帶有一個或多個氨基酸突變。In one embodiment, the mutant of the present invention comprises the amino acid sequence of SEQ ID NO: 1 and carries one or more amino acid mutations in amino acids 1-24 of its N-terminus.
在一些優選的實施方案中,所述突變體在三個區域中的每一個中均包含氨基酸突變,並且在所述三個區域的每一個中包含至少一個S或T,其中所述三個區域包括:第一區域QKS (第6-8位氨基酸)、第二區域NNDMI (第10-14位氨基酸)以及第三區域DNNG (第17-20位氨基酸)。In some preferred embodiments, the mutants comprise amino acid mutations in each of the three regions, and at least one S or T in each of the three regions, wherein the three regions It includes: the first region QKS (amino acids 6-8), the second region NNDMI (amino acids 10-14) and the third region DNNG (amino acids 17-20).
在一些實施方案中,所述氨基酸突變包括用親水性氨基酸、N-X-S/T基序或其組合在所述三個區域中的每一個中進行氨基酸取代,其中X為脯氨酸(P)以外的任何氨基酸。優選地,在所述三個區域中的每一個中至少取代一次。更優選地,在所述三個區域中的每一個中至少取代兩次。在一些實施方案中,親水性氨基酸選自G、T、S、N、E、Y或其組合。在一些實施方案中,N-X-S/T基序為N-A-S。In some embodiments, the amino acid mutation comprises amino acid substitution in each of the three regions with a hydrophilic amino acid, an N-X-S/T motif, or a combination thereof, wherein X is other than proline (P) any amino acid. Preferably, there is at least one substitution in each of the three regions. More preferably, at least two substitutions are made in each of the three regions. In some embodiments, the hydrophilic amino acid is selected from G, T, S, N, E, Y, or a combination thereof. In some embodiments, the N-X-S/T motif is N-A-S.
在一些實施方案中,所述氨基酸突變包括將第一區域QKS突變為GGS、TGS或NAS,將第二區域NNDMI突變為GGSGI、TGSGI或NASGI,以及將第三區域DNNG突變為GGSG、TGSG或GNAS。在一具體實施方案中,本發明的突變體具有選自SEQ ID NO: 2-6的氨基酸序列。In some embodiments, the amino acid mutation comprises mutating the first region QKS to GGS, TGS or NAS, the second region NNDMI to GGSGI, TGSGI or NASGI, and the third region DNNG to GGSG, TGSG or GNAS . In a specific embodiment, the mutant of the present invention has an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-6.
在另一些優選的實施方案中,所述突變體在所述三個區域中的每一個中均包含氨基酸突變,並且在所述三個區域的每一個中包含至少一個S或T,並且還包含在所述三個區域上下游區域中的氨基酸突變。在這些實施方案中,所述氨基酸突變包括用G、S、E、T或其組合在所述三個區域的每一個中至少取代一個氨基酸,以及用T、Y或其組合在每個區域的上下游區域中至少取代一個氨基酸。在一些實施方案中,所述氨基酸突變包括將第一位氨基酸I突變為T,將第5-8位氨基酸(VQKS)突變為TQES或TQTS,將第9-15位氨基酸(VNNDMIV)突變為TSESMIT或TNNSMIT,以及將第17-24位氨基酸(DNNGAVKF)突變為GESGATKY或GTSGATKY。在一具體實施方案中,所述突變體具有SEQ ID NO: 7或SEQ ID NO: 8的氨基酸序列。In other preferred embodiments, the mutants comprise amino acid mutations in each of the three regions, and at least one S or T in each of the three regions, and further comprise Amino acid mutations in the upstream and downstream regions of the three regions. In these embodiments, the amino acid mutation comprises substituting at least one amino acid in each of the three regions with G, S, E, T, or a combination thereof, and substituting T, Y, or a combination thereof in each region Substitute at least one amino acid in the upstream and downstream regions. In some embodiments, the amino acid mutation comprises mutating the first amino acid I to T, amino acids 5-8 (VQKS) to TQES or TQTS, and amino acids 9-15 (VNNDMIV) to TSESMIT or TNNSMIT, and mutating amino acids 17-24 (DNNGAVKF) to GESGATKY or GTSGATKY. In a specific embodiment, the mutant has the amino acid sequence of SEQ ID NO:7 or SEQ ID NO:8.
在另一方面,本發明提供一種靶向分子,其包含本發明的突變體和靶向部分,其中所述靶向部分與所述突變體的N末端共價連接,所述靶向部分所靶向的分子選自:生長因數及其受體、細胞因數及其受體、細胞表面抗原、免疫檢查點分子、激素和其他體內生物活性成分。在一實施方案中,所述靶向部分為抗體或其抗原結合片段、擬抗體、配體、體內活性蛋白的配體結合結構域或功能活性結構域。在一實施方案中,所述靶向部分為Fc片段,優選人IgG1的Fc片段。在一實施方案中,將人IgG1的Fc片段融合至本發明的TGFBR2-ECD突變體的N末端以提供Fc-TGFBR2-ECD融合蛋白。在一具體實施方案中,所述Fc-TGFBR2-ECD融合蛋白包含SEQ ID NO: 52的氨基酸序列。In another aspect, the present invention provides a targeting molecule comprising a mutant of the present invention and a targeting moiety, wherein the targeting moiety is covalently linked to the N-terminus of the mutant, and the targeting moiety targets The targeted molecules are selected from: growth factors and their receptors, cytokines and their receptors, cell surface antigens, immune checkpoint molecules, hormones and other biologically active components in vivo. In one embodiment, the targeting moiety is an antibody or antigen-binding fragment thereof, mimetibody, ligand, ligand binding domain or functionally active domain of an in vivo active protein. In one embodiment, the targeting moiety is an Fc fragment, preferably the Fc fragment of human IgGl. In one embodiment, the Fc fragment of human IgGl is fused to the N-terminus of the TGFBR2-ECD mutants of the invention to provide an Fc-TGFBR2-ECD fusion protein. In a specific embodiment, the Fc-TGFBR2-ECD fusion protein comprises the amino acid sequence of SEQ ID NO:52.
在一具體實施方案中,所述靶向部分為抗PD-L1抗體或其抗原結合片段。In a specific embodiment, the targeting moiety is an anti-PD-L1 antibody or antigen-binding fragment thereof.
在另一方面,本發明提供一種融合多肽,其包含本發明的突變體和第一多肽,並且所述第一多肽的C末端與所述突變體的N末端共價連接。在一實施方案中,所述第一多肽包含抗體的至少一個重鏈可變區或抗體的至少一個輕鏈可變區。在一具體實施方案中,所述抗體為抗PD-L1抗體。In another aspect, the present invention provides a fusion polypeptide comprising the mutant of the present invention and a first polypeptide, and the C-terminus of the first polypeptide is covalently linked to the N-terminus of the mutant. In one embodiment, the first polypeptide comprises at least one heavy chain variable region of an antibody or at least one light chain variable region of an antibody. In a specific embodiment, the antibody is an anti-PD-L1 antibody.
在又一方面,本發明提供一種融合蛋白,其包含本發明的融合多肽和第二多肽,其中所述第二多肽在與所述第一多肽組合時,形成靶向部分。在一實施方案中,所述第一多肽包含抗體的至少一個重鏈可變區,所述第二多肽包含抗體的至少一個輕鏈可變區。在又一實施方案中,所述第一多肽包含抗體的至少一個輕鏈可變區,所述第二多肽包含抗體的至少一個重鏈可變區。在一具體實施方案中,所述抗體為抗PD-L1抗體。在一具體實施方案中,本發明的融合蛋白形成二聚體。In yet another aspect, the present invention provides a fusion protein comprising a fusion polypeptide of the present invention and a second polypeptide, wherein the second polypeptide, when combined with the first polypeptide, forms a targeting moiety. In one embodiment, the first polypeptide comprises at least one heavy chain variable region of an antibody and the second polypeptide comprises at least one light chain variable region of an antibody. In yet another embodiment, the first polypeptide comprises at least one light chain variable region of an antibody and the second polypeptide comprises at least one heavy chain variable region of an antibody. In a specific embodiment, the antibody is an anti-PD-L1 antibody. In a specific embodiment, the fusion proteins of the invention form dimers.
在另一方面,本發明還提供一種藥物組合物,其包含本發明的靶向分子、融合多肽或者融合蛋白,以及藥學上可接受的載劑。本發明還提供所述靶向分子、融合多肽、融合蛋白或者藥物組合物在製備用於治療和/或預防腫瘤性疾病的藥物中的用途。In another aspect, the present invention also provides a pharmaceutical composition comprising the targeting molecule, fusion polypeptide or fusion protein of the present invention, and a pharmaceutically acceptable carrier. The present invention also provides the use of the targeting molecule, fusion polypeptide, fusion protein or pharmaceutical composition in the preparation of a medicament for the treatment and/or prevention of neoplastic diseases.
在又一方面,本發明還提供編碼所述突變體、靶向分子、融合多肽或者融合蛋白的核酸分子,包含所述核酸分子的表達載體,以及包含所述核酸分子或表達載體的宿主細胞。In yet another aspect, the present invention also provides nucleic acid molecules encoding the mutants, targeting molecules, fusion polypeptides or fusion proteins, expression vectors comprising the nucleic acid molecules, and host cells comprising the nucleic acid molecules or expression vectors.
定義definition
在本發明中,除非另有說明,否則本文中使用的科學和技術名詞具有本領域技術人員所通常理解的含義。並且,本文中所用的蛋白質和核酸化學、分子生物學、細胞和組織培養、微生物學、免疫學相關術語和實驗室操作步驟均為相應領域內廣泛使用的術語和常規步驟。同時,為了更好地理解本發明,下面提供相關術語的定義和解釋。In the present invention, unless otherwise specified, scientific and technical terms used herein have the meanings commonly understood by those skilled in the art. Moreover, the protein and nucleic acid chemistry, molecular biology, cell and tissue culture, microbiology, immunology related terms and laboratory procedures used herein are the terms and routine procedures widely used in the corresponding fields. Meanwhile, for a better understanding of the present invention, definitions and explanations of related terms are provided below.
如本文所用,「至少一個(種)」或「一個(種)或多個(種)」可以表示1、2、3、4、5、6、7、8個(種)或更多個(種)。As used herein, "at least one (species)" or "one (species) or more (species)" can mean 1, 2, 3, 4, 5, 6, 7, 8 (species) or more ( kind).
如本文所用,「抗體」指免疫球蛋白和免疫球蛋白片段,無論天然的或者部分或全部合成(例如重組)產生的,其通過至少一個抗原結合位點特異性結合到抗原的表位。因此,抗體包括具有與免疫球蛋白抗原結合結構域(抗體結合位點)同源或基本上同源的結合結構域的任何蛋白。抗體涵蓋抗原結合片段。如本文所用,因此術語抗體包括合成抗體、重組產生的抗體、多特異性抗體(例如雙特異性抗體)、人抗體、非人抗體、人源化抗體、嵌合抗體、胞內抗體、單域抗體以及抗原結合片段,例如但不限於Fab片段、Fab’片段、F(ab’) 2片段、Fv片段、二硫鍵連接的Fv (dsFv)、Fd片段、Fd’片段、單鏈Fv (scFv)、單鏈Fab (scFab)、雙抗體、二硫鍵連接的Fab (dscFab)或者上述任何抗體的抗原結合片段。本文所提供的抗體包括任何免疫球蛋白類型(例如,IgG、IgM、IgD、IgE、IgA和IgY)、任何類別(例如IgG1、IgG2、IgG3、IgG4、IgA1和IgA2)或亞類(例如,IgG2a和IgG2b)的成員。 As used herein, "antibody" refers to immunoglobulins and immunoglobulin fragments, whether natural or partially or fully synthetically (eg, recombinantly) produced, that specifically bind to an epitope of an antigen through at least one antigen-binding site. Thus, an antibody includes any protein having a binding domain that is homologous or substantially homologous to the antigen binding domain of an immunoglobulin (the antibody binding site). Antibodies encompass antigen-binding fragments. As used herein, the term antibody thus includes synthetic antibodies, recombinantly produced antibodies, multispecific antibodies (eg, bispecific antibodies), human antibodies, non-human antibodies, humanized antibodies, chimeric antibodies, intrabodies, single domain antibodies Antibodies and antigen-binding fragments such as, but not limited to, Fab fragments, Fab' fragments, F(ab') 2 fragments, Fv fragments, disulfide-linked Fv (dsFv), Fd fragments, Fd' fragments, single chain Fv (scFv) ), single-chain Fab (scFab), diabody, disulfide-linked Fab (dscFab), or an antigen-binding fragment of any of the foregoing. Antibodies provided herein include any immunoglobulin class (eg, IgG, IgM, IgD, IgE, IgA, and IgY), any class (eg, IgG1, IgG2, IgG3, IgG4, IgA1, and IgA2), or subclass (eg, IgG2a) and IgG2b).
如本文所用,抗體的「抗原結合片段」指全長抗體的任何部分,其少於全長,但是至少包含結合抗原的所述抗體的部分可變區(例如一個或多個CDR和/或一個或多個抗原結合位點),並且因此保留全長抗體的至少部分特異性結合抗原的能力。抗原結合片段包括通過酶促處理全長抗體所產生的抗體衍生物,以及通過化學合成或基因工程技術(例如DNA重組技術)產生的衍生物。抗原結合片段的實例包括但不限於Fab、Fab’、F(ab’)
2、單鏈Fv (scFv)、Fv、dsFv、雙抗體、Fd和Fd’片段以及其他片段,包括修飾的片段(參見,例如Methods in Molecular Biology, Vol 207: Recombinant Antibodies for Cancer Therapy Methods and Protocols (2003); Chapter 1; p 3-25, Kipriyanov)。所述片段可以包括連接在一起的多條鏈,例如通過二硫鍵和/或通過肽接頭。抗原結合片段包括任何抗體片段,其在被插入抗體框架(例如通過置換相應區域)時獲得免疫特異性地結合抗原的抗體。
As used herein, an "antigen-binding fragment" of an antibody refers to any portion of a full-length antibody that is less than full-length, but that comprises at least a portion of the variable region (eg, one or more CDRs and/or one or more of the variable region of said antibody that binds an antigen) antigen-binding sites), and thus retain at least a portion of the ability of the full-length antibody to specifically bind antigen. Antigen-binding fragments include antibody derivatives produced by enzymatic treatment of full-length antibodies, as well as derivatives produced by chemical synthesis or genetic engineering techniques (eg, recombinant DNA techniques). Examples of antigen-binding fragments include, but are not limited to, Fab, Fab', F(ab') 2 , single-chain Fv (scFv), Fv, dsFv, diabodies, Fd and Fd' fragments, and other fragments, including modified fragments (see , eg Methods in Molecular Biology, Vol 207: Recombinant Antibodies for Cancer Therapy Methods and Protocols (2003);
「傳統」或「全長」抗體通常包含四個多肽:兩個重鏈和兩個輕鏈。每個鏈可以包含可變區和恒定區。每個輕鏈從N末端到C末端包含輕鏈可變區(V L)和輕鏈恒定區(C L)。每個重鏈從N末端到C末端包含重鏈可變區(V H)以及一個或多個重鏈恒定區(C H),重鏈恒定區從N末端到C末端可以包括C H1、C H2和C H3,或C H1、C H2、C H3和C H4。每個V L和每個V H可以包含三個高度可變的「互補決定區(CDR)」和四個相對保守的「框架區(FR)」。在本文中,輕鏈可變區的CDR可以稱為LCDR1、LCDR2和LCDR3,重鏈可變區的CDR可以稱為HCDR1、HCDR2和HCDR3。本領域技術人員可以使用本領域熟知的方法識別CDR,例如使用Kabat或Chothia編碼法(參見例如Kabat, E.A. et al.(1991) Sequences of Proteins of Immunological Interest, Fifth Edition, U.S. Department of Health and Human Services, NIH Publication No. 91-3242, and Chothia, C. et al.(1987) J. Mol. Biol. 196:901-917)。通常認為包含六個CDR (即三個重鏈CDR和三個輕鏈CDR)的Fv片段是一個抗原結合位點的最小單位,但在某些情況下,包含少於六個CDR(例如三、四或五個)的其他片段(例如單域抗體,又稱為納米抗體)同樣具有結合抗原的能力。 "Traditional" or "full-length" antibodies typically contain four polypeptides: two heavy chains and two light chains. Each chain may contain variable and constant regions. Each light chain comprises a light chain variable region ( VL ) and a light chain constant region ( CL ) from the N-terminus to the C-terminus. Each heavy chain includes a heavy chain variable region (V H ) and one or more heavy chain constant regions ( CH ) from the N-terminus to the C-terminus, and the heavy chain constant region from the N-terminus to the C -terminus may include CH1, CH2 and CH3 , or CH1 , CH2, CH3 and CH4 . Each VL and each VH may contain three highly variable "complementarity determining regions (CDRs)" and four relatively conserved "framework regions (FRs)". Herein, the CDRs of the light chain variable region may be referred to as LCDR1, LCDR2 and LCDR3, and the CDRs of the heavy chain variable region may be referred to as HCDR1, HCDR2 and HCDR3. One of skill in the art can identify CDRs using methods well known in the art, such as using Kabat or Chothia coding (see e.g. Kabat, EA et al. (1991) Sequences of Proteins of Immunological Interest , Fifth Edition, US Department of Health and Human Services , NIH Publication No. 91-3242, and Chothia, C. et al. (1987) J. Mol. Biol . 196:901-917). An Fv fragment comprising six CDRs (i.e. three heavy chain CDRs and three light chain CDRs) is generally considered to be the smallest unit of an antigen binding site, but in some cases less than six CDRs (e.g. three, Four or five) other fragments (such as single domain antibodies, also known as nanobodies) also have the ability to bind antigen.
如本文所用,「Fv片段」是指包含一對VH和VL的抗原結合片段。可以通過肽接頭將VH和VL連接來獲得「單鏈Fv (scFv)」。通過向Fv或scFv中引入二硫鍵可以分別獲得「二硫鍵穩定的Fv (dsFv)」或「單鏈二硫鍵穩定的Fv (scdsFv或dsscFv)」。As used herein, an "Fv fragment" refers to an antigen-binding fragment comprising a pair of VH and VL. "Single-chain Fv (scFv)" can be obtained by linking VH and VL via a peptide linker. "Disulfide stabilized Fv (dsFv)" or "single-chain disulfide stabilized Fv (scdsFv or dsscFv)" can be obtained by introducing a disulfide bond into Fv or scFv, respectively.
如本文所用,「Fab」包含一個完整的抗體輕鏈(VL-CL)和抗體重鏈可變區和一個重鏈恒定區(VH-CH1,也稱為Fd)。用肽接頭將「Fab」中的CL和CH1連接可以獲得單鏈「Fab (scFab)」。「F(ab’) 2」基本上包含通過鉸鏈區的二硫鍵連接的兩個Fab片段。「Fab'」為F(ab’) 2的一半,其可以通過還原F(ab’) 2鉸鏈區的二硫鍵獲得。 As used herein, "Fab" comprises one complete antibody light chain (VL-CL) and antibody heavy chain variable region and one heavy chain constant region (VH-CH1, also known as Fd). A single-chain "Fab (scFab)" can be obtained by linking CL and CH1 in "Fab" with a peptide linker. "F(ab') 2 " essentially comprises two Fab fragments linked by disulfide bonds in the hinge region. "Fab'" is one half of F(ab') 2 , which can be obtained by reducing disulfide bonds in the hinge region of F(ab') 2 .
如本文所用,「Fc片段」是指全長抗體經木瓜蛋白酶消化的可結晶片段。一般而言,IgG的Fc片段可以包含部分鉸鏈區、CH2和CH3。在本文中,Fc片段可以包含至少部分鉸鏈區(例如鉸鏈區的全部或部分)、CH2和CH3。本領域技術人員可以根據已知的演算法和軟體判斷CDR、FR、VH、VL、CL、CH1、CH2、CH3和鉸鏈區在抗體中的位置,可以應用的演算法和軟體的描述可以參見例如William R. Strohl, Lila M. Strohl, (2012), Therapeutic Antibody Engineering, Woodhead Publishing, pp. 37-56。As used herein, an "Fc fragment" refers to a papain-digested crystallizable fragment of a full-length antibody. In general, the Fc fragment of an IgG may comprise part of the hinge region, CH2 and CH3. As used herein, an Fc fragment may comprise at least part of the hinge region (eg all or part of the hinge region), CH2 and CH3. Those skilled in the art can judge the positions of CDR, FR, VH, VL, CL, CH1, CH2, CH3 and hinge regions in the antibody according to known algorithms and software. For the description of applicable algorithms and software, see for example William R. Strohl, Lila M. Strohl, (2012), Therapeutic Antibody Engineering, Woodhead Publishing, pp. 37-56.
如本文所用,「雙抗體(diabody)」是指這樣的抗體,其包含兩個scFv,其中每個scFv中的V H和V L之間通過短肽接頭(大約5-10個氨基酸殘基)連接,使得V H和V L鏈間配對(即第一scFv的V H和第二scFv的V L配對,第一scFv的V L和第二scFv的V H配對)形成抗原結合位點。 As used herein, a "diabody" refers to an antibody comprising two scFvs with a short peptide linker (approximately 5-10 amino acid residues) between the VH and VL in each scFv Linked such that the VH and VL interchain pairings (ie, the VH of the first scFv and the VL pairing of the second scFv, the VL pairing of the first scFv and the VH pairing of the second scFv) form the antigen binding site.
如本文所用,「嵌合抗體」指這樣的抗體,其中的一部分(例如CDR、FR、可變區、恒定區或其組合)與衍生自特定物種的抗體中相應序列相同或同源,剩餘的部分與衍生自另一物種的抗體中相應序列相同或同源。嵌合抗體可以通過抗體工程化產生。抗體工程化的方法是本領域技術人員公知的。特別地,可以通過DNA重組技術生成嵌合抗體(例如參加Sambrook, J., et al. (1989). Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y)。 As used herein, a "chimeric antibody" refers to an antibody in which a portion (eg, CDRs, FRs, variable regions, constant regions, or a combination thereof) is identical or homologous to corresponding sequences in an antibody derived from a particular species, and the remainder The portion is identical or homologous to the corresponding sequence in an antibody derived from another species. Chimeric antibodies can be produced by antibody engineering. Methods of antibody engineering are well known to those skilled in the art. In particular, chimeric antibodies can be generated by recombinant DNA techniques (eg see Sambrook, J., et al. (1989). Molecular cloning: a laboratory manual , 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY).
如本文所用,術語「人源化抗體」是指非人抗體經修飾以增加與人抗體的序列同源性的抗體。人源化抗體可以通過抗體工程化改造任何非人物種抗體或其中包含非人物種來源序列的抗體(例如嵌合抗體)來獲得。由非人抗體獲得人源化抗體的技術是本領域技術人員熟知的。As used herein, the term "humanized antibody" refers to an antibody in which a non-human antibody has been modified to increase sequence homology to a human antibody. Humanized antibodies can be obtained by antibody engineering any antibody of a non-human species or an antibody (eg, a chimeric antibody) that contains sequences derived from a non-human species therein. Techniques for obtaining humanized antibodies from non-human antibodies are well known to those skilled in the art.
如本文所用,術語「人抗體」是指由人產生的抗體或使用本領域已知的任何技術製備的具有與由人產生的抗體相對應的氨基酸序列的抗體。人抗體的定義涵蓋完整或全長抗體、其片段和/或包含至少一種人重鏈和/或輕鏈多肽的抗體。As used herein, the term "human antibody" refers to an antibody produced by a human or an antibody prepared using any technique known in the art having an amino acid sequence corresponding to an antibody produced by a human. The definition of human antibody encompasses whole or full-length antibodies, fragments thereof and/or antibodies comprising at least one human heavy and/or light chain polypeptide.
如本文所用,「單域抗體(sdAb) 」又稱為「納米抗體」,是指包含單個免疫球蛋白可變結構域(單可變結構域)作為功能性抗原結合片段的抗體。與全長抗體的可變區類似,單可變結構域通常包含形成抗原結合位點的CDR1、CDR2和CDR3以及起支持作用的框架區。As used herein, "single domain antibodies (sdAbs)" also referred to as "nanobodies" refer to antibodies comprising a single immunoglobulin variable domain (single variable domain) as a functional antigen-binding fragment. Similar to the variable regions of full-length antibodies, single variable domains typically comprise CDR1, CDR2, and CDR3 that form the antigen-binding site, as well as supporting framework regions.
「親和力」或「結合親和力」用來衡量分子與其配體之間通過非共價作用力相互結合的強度,例如本發明的靶向部分與其靶點之間的結合強度,例如抗體或抗原結合片段與抗原之間或者本發明的TGFBR2-ECD突變體與TGF-β之間的結合強度。親和力的大小通常報告為平衡解離常數K D,常通過測量締合常數(ka)和解離常數(kd)並計算kd除以ka的商來確定(K D= kd/ka)。K D可以利用常規技術容易地測定,例如通過平衡透析;通過使用Octet RED96檢測系統,利用製造商所列的一般方法;通過使用酶聯免疫吸附測定(ELISA);通過利用放射性標記的靶抗原進行放射免疫測定;或者通過技術人員已知的其他方法。 "Affinity" or "binding affinity" is used to measure the strength of mutual binding between a molecule and its ligand through non-covalent forces, such as the binding strength between a targeting moiety of the invention and its target, such as an antibody or antigen-binding fragment Binding strength to antigen or between TGFBR2-ECD mutants of the invention and TGF-beta. The magnitude of affinity is usually reported as the equilibrium dissociation constant KD , often determined by measuring the association constant (ka) and the dissociation constant (kd) and calculating the quotient of kd divided by ka ( KD = kd/ka). KD can be readily determined using conventional techniques, such as by equilibrium dialysis; by using the Octet RED96 detection system, using the general methods listed by the manufacturer; by using an enzyme-linked immunosorbent assay (ELISA); by using radiolabeled target antigens radioimmunoassay; or by other methods known to the skilled artisan.
「特異性結合」是指兩個分子之間以較高的親和力相互結合,通常,特異性結合的兩個分子之間的K D值可以為10 -6、10 -7、10 -8到10 -9M或更低。例如,抗體或抗原結合片段通過抗原結合位點與抗原的抗體結合位點之間可以以10 -6到10 -9M的K D值特異性結合,TGFBR2-ECD與TGF-β之間可以以10 -6到10 -9M的K D值特異性結合。 "Specific binding" means that two molecules bind to each other with higher affinity. Generally, the KD value between the two molecules that specifically bind can be 10 -6 , 10 -7 , 10 -8 to 10 -9 M or lower. For example, an antibody or antigen-binding fragment can specifically bind with a KD value of 10-6 to 10-9 M between the antigen-binding site and the antibody-binding site of the antigen, and the relationship between TGFBR2-ECD and TGF-β can be Specific binding with KD values of 10-6 to 10-9 M.
在多肽或蛋白中,合適的保守氨基酸取代是本領域技術人員已知的,並且一般可以進行而不改變所得分子的生物活性。通常,本領域技術人員認識到多肽的非必需區中的單個氨基酸取代基本上不改變生物活性(參見,例如Watson et al. , Molecular Biology of the Gene, 4th Edition, 1987, The Benjamin/Cummings Pub. co., p.224)。 In polypeptides or proteins, suitable conservative amino acid substitutions are known to those of skill in the art and can generally be made without altering the biological activity of the resulting molecule. Generally, those skilled in the art recognize that single amino acid substitutions in non-essential regions of polypeptides do not substantially alter biological activity (see, e.g., Watson et al. , Molecular Biology of the Gene , 4th Edition, 1987, The Benjamin/Cummings Pub. co., p.224).
如本文所用,術語「多肽」指包含至少兩個通過肽鍵連接的氨基酸或其衍生物的聚合物。「蛋白」可以由一條或更多條多肽以共價或非共價方式形成。As used herein, the term "polypeptide" refers to a polymer comprising at least two amino acids or derivatives thereof linked by peptide bonds. A "protein" may be formed covalently or non-covalently from one or more polypeptides.
如本文所用,術語「突變」是指多肽或蛋白中包含一個或多個氨基酸的取代、缺失或增加。所述取代可以是保守或非保守取代。在本發明的實施方案中,可以用一個氨基酸取代另一氨基酸(例如用G取代Q),也可以用一個氨基酸基序取代另一個氨基酸基序(例如用N-A-S基序取代Q-K-S基序)。在本文中,將取代一個位置上的氨基酸基序或一個位點上的氨基酸的事件描述為取代一次。在本文中,當指定突變位置時,第n位氨基酸指從多肽的氨基末端(即N末端)的第1個氨基酸開始數的第n個氨基酸。在本文中,突變位置的指定以SEQ ID NO: 1為基準。As used herein, the term "mutation" refers to a polypeptide or protein comprising a substitution, deletion or addition of one or more amino acids. The substitutions can be conservative or non-conservative. In embodiments of the invention, one amino acid may be substituted for another amino acid (eg, G for Q), or one amino acid motif may be substituted for another amino acid motif (eg, N-A-S motif for Q-K-S motif). Herein, the event of substituting an amino acid motif at a position or an amino acid at a position is described as a substitution. Herein, when specifying a mutation position, the n-th amino acid refers to the n-th amino acid counted from the first amino acid at the amino terminus (ie, the N-terminus) of the polypeptide. Herein, the assignment of mutation positions is based on SEQ ID NO: 1.
如本文所用,「野生型」多肽或蛋白是指天然存在的,未經人為改造的多肽或蛋白。多肽或蛋白的「突變型」或「突變體」相對於「野生型」的多肽或蛋白帶有突變。例如,野生型TGF-βRⅡ胞外區包含SEQ ID NO: 1的序列。TGF-βRⅡ胞外區的突變體相對於SEQ ID NO: 1的序列帶有突變。As used herein, a "wild-type" polypeptide or protein refers to a naturally occurring polypeptide or protein that has not been engineered. A "mutant" or "mutant" of a polypeptide or protein carries a mutation relative to the "wild-type" polypeptide or protein. For example, the extracellular region of wild-type TGF-betaRII comprises the sequence of SEQ ID NO:1. Mutants in the extracellular domain of TGF-betaRII carry mutations relative to the sequence of SEQ ID NO:1.
如本文所用,術語「多核苷酸」和「核酸分子」指包含至少兩個連接的核苷酸或核苷酸衍生物的寡聚體或聚合物,包括通常通過磷酸二酯鍵連接在一起的去氧核糖核酸(DNA)和核糖核酸(RNA)。As used herein, the terms "polynucleotide" and "nucleic acid molecule" refer to an oligomer or polymer comprising at least two linked nucleotides or nucleotide derivatives, including usually linked together by phosphodiester bonds Deoxyribonucleic acid (DNA) and ribonucleic acid (RNA).
本發明的多肽、蛋白或核酸分子可以是「分離的」。表述「分離的」指多肽、蛋白或核酸分子可以例如是經過人工改造的,和/或與其天然存在的環境中的其他物質分離的。諸如cDNA分子的「分離的」核酸分子可以在通過重組技術製備時基本上不含其他細胞物質或培養基,或者在化學合成時基本上不含化學前體或其他化學成分。A polypeptide, protein or nucleic acid molecule of the invention may be "isolated". The expression "isolated" means that the polypeptide, protein or nucleic acid molecule may, for example, be engineered and/or separated from other substances in its naturally occurring environment. An "isolated" nucleic acid molecule, such as a cDNA molecule, can be substantially free of other cellular material or culture medium when prepared by recombinant techniques, or substantially free of chemical precursors or other chemical components when chemically synthesized.
如本文所用,「表達」指通過多核苷酸的轉錄和翻譯產生多肽的過程。多肽的表達水準可以利用本領域已知的任何方法來評價,包括例如測定從宿主細胞產生的多肽的量的方法。這類方法可以包括但不限於通過ELISA定量細胞裂解物中的多肽,凝膠電泳之後考馬斯藍染色或銀染,Lowry蛋白測定以及Bradford蛋白測定。As used herein, "expression" refers to the process by which a polypeptide is produced by transcription and translation of a polynucleotide. The level of expression of a polypeptide can be assessed using any method known in the art, including, for example, methods of determining the amount of polypeptide produced from a host cell. Such methods may include, but are not limited to, quantification of polypeptides in cell lysates by ELISA, Coomassie blue staining or silver staining followed by gel electrophoresis, Lowry protein assay, and Bradford protein assay.
如本文所用,「宿主細胞」是用於接受、保持、複製或擴增載體的細胞。宿主細胞還可以用來表達核酸或載體所編碼的多肽。宿主細胞可以是真核細胞或原核細胞。合適的宿主細胞包括但不限於CHO細胞、各種COS細胞、HeLa細胞、HEK細胞例如HEK 293細胞。As used herein, a "host cell" is a cell used to receive, maintain, replicate or amplify a vector. Host cells can also be used to express nucleic acids or polypeptides encoded by vectors. Host cells can be eukaryotic cells or prokaryotic cells. Suitable host cells include, but are not limited to, CHO cells, various COS cells, HeLa cells, HEK cells such as HEK 293 cells.
如本文所用,「載體」是用於將外源核酸導入宿主細胞的媒介,當載體轉化入適當的宿主細胞時,外源核酸得以擴增或表達。載體包括那些通常通過限制酶切消化和連接可以將編碼多肽或其片段的核酸引入其中的載體。載體還包括那些包含編碼多肽的核酸的載體。載體通常保持游離,但是可以設計為使基因或其部分整合入基因組的染色體。還考慮人工染色體的載體,例如酵母人工載體和哺乳動物人工染色體。如本文所用,載體的定義涵蓋質粒、線性化質粒、病毒載體、粘粒、噬菌體載體、噬菌粒、人工染色體(例如,酵母人工染色體和哺乳動物人工染色體)等。如本文所用,載體可以在宿主細胞中表達或複製。As used herein, a "vector" is a vehicle used to introduce exogenous nucleic acid into a host cell, which is amplified or expressed when the vector is transformed into an appropriate host cell. Vectors include those into which nucleic acids encoding polypeptides or fragments thereof can be introduced, typically by restriction digestion and ligation. Vectors also include those that contain nucleic acid encoding a polypeptide. Vectors generally remain episomal, but can be designed to integrate the gene or portion thereof into the chromosome of the genome. Also contemplated are artificial chromosome vectors, such as yeast artificial vectors and mammalian artificial chromosomes. As used herein, the definition of vector encompasses plasmids, linearized plasmids, viral vectors, cosmids, phage vectors, phagemids, artificial chromosomes (eg, yeast artificial chromosomes and mammalian artificial chromosomes), and the like. As used herein, a vector can be expressed or replicated in a host cell.
如本文所用,「表達載體」包括能夠表達多肽的載體,其包含編碼目標多肽的多核苷酸序列。編碼目標多肽的多核苷酸序列與能夠影響其表達的調控序列可操作地連接。這類調控序列可以包括啟動子和終止子序列,並且任選地可以包括一個或多個複製起點、一個或多個選擇標記、增強子、多腺苷酸化信號等。表達載體一般來源於質粒或病毒DNA,或者可以包含這兩者的元件。因此,表達載體可以指重組DNA或RNA構建體,例如質粒、噬菌體載體、重組病毒或其他載體,當引入適當的宿主細胞時,導致克隆DNA或RNA的表達。適當的表達載體是本領域技術人員公知的,並且包括在真核細胞和/或原核細胞中可複製的表達載體以及保持游離的表達載體或者整合入宿主細胞基因組的表達載體。As used herein, an "expression vector" includes a vector capable of expressing a polypeptide comprising a polynucleotide sequence encoding a polypeptide of interest. The polynucleotide sequence encoding the polypeptide of interest is operably linked to regulatory sequences capable of affecting its expression. Such regulatory sequences may include promoter and terminator sequences, and optionally, one or more origins of replication, one or more selectable markers, enhancers, polyadenylation signals, and the like. Expression vectors are typically derived from plasmid or viral DNA, or may contain elements of both. Thus, an expression vector may refer to a recombinant DNA or RNA construct, such as a plasmid, phage vector, recombinant virus, or other vector, which, when introduced into an appropriate host cell, results in the expression of cloned DNA or RNA. Appropriate expression vectors are well known to those skilled in the art and include those that are replicable in eukaryotic and/or prokaryotic cells as well as those that remain episomal or that integrate into the host cell genome.
如本文所用,術語「靶向部分」指能特異性地結合靶點的分子。靶向部分可以將與其共價連接的分子(例如本發明的TGFBR2-ECD突變體)靶向到特定的靶點。靶向部分可以識別一個或多個靶點。As used herein, the term "targeting moiety" refers to a molecule capable of specifically binding a target. A targeting moiety can target a molecule to which it is covalently attached (eg, a TGFBR2-ECD mutant of the invention) to a specific target. A targeting moiety can recognize one or more targets.
如本文所用,術語「配體」指能夠調節特定的細胞生理活動的活性物質,其可以與特定體內活性蛋白結合,啟動細胞內的生理生化反應。As used herein, the term "ligand" refers to an active substance capable of regulating a specific cellular physiological activity, which can bind to a specific in vivo active protein to initiate a physiological and biochemical reaction in the cell.
如本文所用,「體內活性蛋白」指配體本身以及可以調節細胞生理活動,例如接受細胞外或細胞內配體並介導信號轉導的蛋白,其可以具有配體結合結構域和/或功能性結構域。體內活性蛋白可以為配體、受體、激酶、離子通道或其他參與信號轉導的蛋白。如本文所用,術語「配體結合結構域」指體內活性蛋白中能夠特異性識別並結合配體的結構域。「功能性結構域」指體內活性蛋白中能夠介導信號轉導,啟動細胞內的生理生化反應的結構域。As used herein, "in vivo active protein" refers to the ligand itself as well as a protein that can modulate cellular physiological activities, such as a protein that accepts an extracellular or intracellular ligand and mediates signal transduction, which can have a ligand binding domain and/or function Sexual domain. In vivo active proteins can be ligands, receptors, kinases, ion channels or other proteins involved in signal transduction. As used herein, the term "ligand binding domain" refers to a domain in an active protein in vivo that is capable of specifically recognizing and binding a ligand. "Functional domain" refers to a domain in an active protein in vivo that can mediate signal transduction and initiate physiological and biochemical reactions in cells.
如本文所用,「治療有效量」或「治療有效劑量」指施用於物件之後至少足以產生療效的物質、化合物、材料或包含化合物的組合物的量。因此,其為防止、治癒、改善、阻滯或部分阻滯疾病或病症的症狀所必需的量。同樣,如本文所用,「預防有效量」或「預防有效劑量」指在施用於物件時會具有預期的預防效果的物質、化合物、材料或包含化合物的組合物的量,例如,防止或延遲疾病或症狀的發生或復發,減少疾病或症狀發生或復發的可能性。完全預防有效劑量不必通過施用一個劑量發生,並且可以僅在施用一系列劑量之後發生。因此,預防有效量可以在一次或多次施用中施用。As used herein, a "therapeutically effective amount" or "therapeutically effective dose" refers to an amount of a substance, compound, material, or composition comprising a compound that is at least sufficient to produce a therapeutic effect after administration to an article. Thus, it is an amount necessary to prevent, cure, ameliorate, retard or partially retard the symptoms of a disease or disorder. Also, as used herein, a "prophylactically effective amount" or "prophylactically effective dose" refers to an amount of a substance, compound, material, or composition comprising a compound that, when applied to an object, will have the desired prophylactic effect, eg, preventing or delaying disease or the occurrence or recurrence of symptoms, reducing the likelihood of the occurrence or recurrence of disease or symptoms. A fully prophylactically effective dose need not occur by administering one dose, and may occur only after administering a series of doses. Thus, a prophylactically effective amount can be administered in one or more administrations.
如本文中所使用的,術語「個體」是指哺乳動物,例如人。As used herein, the term "individual" refers to a mammal, such as a human.
TGFBR2-ECD突變體TGFBR2-ECD mutant
在一方面,本發明提供一種TGF-βRⅡ胞外區(TGFBR2-ECD)的突變體,其能夠結合TGF-β,並且在N端帶有一個或多個(例如1、2、3、4、5、6、7、8、9、10、11、12、13、14或15個)氨基酸突變,從而與野生型TGF-βRⅡ胞外區相比,所述突變體包含在易斷裂區域的氨基酸突變和/或親水性的改進。In one aspect, the present invention provides a mutant of the extracellular domain of TGF-βRII (TGFBR2-ECD), which is capable of binding TGF-β and has one or more (
如本文所用,術語「TGF-βRⅡ胞外區」或「TGFBR2-ECD」具有相同含義,是指TGF-β Ⅱ型受體(TGF-βRⅡ)的胞外結構域,其具有結合TGF-β的活性。二聚化TGFBR2-ECD可以作為TGF-β Trap (參見例如WO2015/118175和WO2018/205985)結合和捕獲TGF-β二聚體,從而抑制TGF-β信號通路以及消除TGF-β信號通路相關的免疫抑制。可以使用本領域已知的各種檢測方法確定TGF-β信號通路的抑制,例如檢測TGF-β信號通路控制的下游基因的表達。As used herein, the terms "TGF-betaRII extracellular domain" or "TGFBR2-ECD" have the same meaning and refer to the extracellular domain of the TGF-beta type II receptor (TGF-betaRII), which has the ability to bind TGF-beta active. Dimerized TGFBR2-ECD can bind and trap TGF-β dimers as a TGF-β Trap (see, eg, WO2015/118175 and WO2018/205985), thereby inhibiting TGF-β signaling and abrogating TGF-β signaling-associated immunity inhibition. Inhibition of the TGF-beta signaling pathway can be determined using various assays known in the art, eg, detecting the expression of downstream genes controlled by the TGF-beta signaling pathway.
野生型TGFBR2-ECD為136個氨基酸的肽段(SEQ ID NO: 1),其可以與其他多肽組合形成包含TGF-β Trap的雙功能分子,例如抗PD-L1/TGF-β Trap (參見例如WO2015/118175和WO2018/205985)。但是,包含野生型TGFBR2-ECD的雙功能分子易發生斷裂,不利於後續的成藥性開發。本發明的TGFBR2-ECD突變體為相對於野生型TGFBR2-ECD的改進型多肽。相比於包含野生型TGFBR2-ECD的雙功能分子,包含本發明的TGFBR2-ECD突變體的雙功能分子在生產過程中不易產生降解,具有更好的成藥性。Wild-type TGFBR2-ECD is a 136 amino acid peptide (SEQ ID NO: 1) that can be combined with other polypeptides to form bifunctional molecules comprising TGF-β Trap, such as anti-PD-L1/TGF-β Trap (see e.g. WO2015/118175 and WO2018/205985). However, bifunctional molecules containing wild-type TGFBR2-ECD are prone to breakage, which is not conducive to subsequent druggability development. The TGFBR2-ECD mutants of the present invention are improved polypeptides relative to wild-type TGFBR2-ECD. Compared with the bifunctional molecule comprising the wild-type TGFBR2-ECD, the bifunctional molecule comprising the TGFBR2-ECD mutant of the present invention is less likely to be degraded during the production process and has better druggability.
發明人發現,野生型TGFBR2-ECD容易在N端第1-24位氨基酸中發生斷裂。在一實施方案中,所述突變體包含SEQ ID NO: 1的氨基酸序列,並且在其N端第1-24位氨基酸中帶有一個或多個氨基酸突變,例如1、2、3、4、5、6、7、8、9、10、11、12、13、14或15個,優選9個或更多個。在另一實施方案中,所述氨基酸突變的數目為16個以下。The inventors found that wild-type TGFBR2-ECD is prone to cleavage in the N-terminal amino acids 1-24. In one embodiment, the mutant comprises the amino acid sequence of SEQ ID NO: 1 with one or more amino acid mutations in its N-terminal amino acids 1-24, such as 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15, preferably 9 or more. In another embodiment, the number of amino acid mutations is 16 or less.
在一些優選的實施方案中,所述突變體在三個區域中的至少一個,優選每一個中均包含氨基酸突變。優選地所述突變體在所述三個區域的每一個中包含至少一個S或T。所述三個區域包括:第一區域QKS (第6-8位氨基酸)、第二區域NNDMI (第10-14位氨基酸)以及第三區域DNNG (第17-20位氨基酸)。In some preferred embodiments, the mutants comprise amino acid mutations in at least one, preferably each, of the three regions. Preferably the mutant contains at least one S or T in each of the three regions. The three regions include: the first region QKS (amino acids 6-8), the second region NNDMI (amino acids 10-14), and the third region DNNG (amino acids 17-20).
在一些實施方案中,所述氨基酸突變包括用親水性氨基酸、N-X-S/T基序或其組合在所述三個區域中的每一個中進行氨基酸取代,其中X為脯氨酸(P)以外的任何氨基酸。優選地,在所述三個區域中的每一個中至少取代一次。更優選地,在所述三個區域中的每一個中至少取代兩次。在一些實施方案中,親水性氨基酸選自G、T、S、N、E、Y或其組合。在一些實施方案中,N-X-S/T基序為N-A-S。In some embodiments, the amino acid mutation comprises amino acid substitution in each of the three regions with a hydrophilic amino acid, an N-X-S/T motif, or a combination thereof, wherein X is other than proline (P) any amino acid. Preferably, there is at least one substitution in each of the three regions. More preferably, at least two substitutions are made in each of the three regions. In some embodiments, the hydrophilic amino acid is selected from G, T, S, N, E, Y, or a combination thereof. In some embodiments, the N-X-S/T motif is N-A-S.
在一些實施方案中,所述氨基酸突變包括將第一區域QKS突變為GGS、TGS或NAS,將第二區域NNDMI突變為GGSGI、TGSGI或NASGI,以及將第三區域DNNG突變為GGSG、TGSG或GNAS。在一具體實施方案中,本發明的突變體具有選自SEQ ID NO: 2-6的氨基酸序列。In some embodiments, the amino acid mutation comprises mutating the first region QKS to GGS, TGS or NAS, the second region NNDMI to GGSGI, TGSGI or NASGI, and the third region DNNG to GGSG, TGSG or GNAS . In a specific embodiment, the mutant of the present invention has an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-6.
在另一些優選的實施方案中,所述突變體在所述三個區域中的每一個中均包含氨基酸突變,並且在所述三個區域的每一個中包含至少一個S或T,並且還包含在所述三個區域上下游區域中的氨基酸突變。在這些實施方案中,所述氨基酸突變包括用G、S、E、T或其組合在所述三個區域的每一個中至少取代一個氨基酸,以及用T、Y或其組合在每個區域的上下游區域中至少取代一個氨基酸。在一些優選的實施方案中,所述氨基酸突變包括將第一位氨基酸I突變為T,將第5-8位氨基酸(VQKS)突變為TQES或TQTS,將第9-15位氨基酸(VNNDMIV)突變為TSESMIT或TNNSMIT,以及將第17-24位氨基酸(DNNGAVKF)突變為GESGATKY或GTSGATKY。在一具體實施方案中,所述突變體具有SEQ ID NO: 7或SEQ ID NO: 8的氨基酸序列。In other preferred embodiments, the mutants comprise amino acid mutations in each of the three regions, and at least one S or T in each of the three regions, and further comprise Amino acid mutations in the upstream and downstream regions of the three regions. In these embodiments, the amino acid mutation comprises substituting at least one amino acid in each of the three regions with G, S, E, T, or a combination thereof, and substituting T, Y, or a combination thereof in each region Substitute at least one amino acid in the upstream and downstream regions. In some preferred embodiments, the amino acid mutation comprises mutating the first amino acid I to T, 5-8 amino acids (VQKS) to TQES or TQTS, 9-15 amino acids (VNNDMIV) is TSESMIT or TNNSMIT, and amino acids 17-24 (DNNGAVKF) are mutated to GESGATKY or GTSGATKY. In a specific embodiment, the mutant has the amino acid sequence of SEQ ID NO:7 or SEQ ID NO:8.
靶向分子targeting molecule
在又一方面,本發明提供了一種靶向分子,其包含本發明的TGFBR2-ECD突變體和靶向部分,所述靶向部分與所述突變體的N末端共價連接。在一實施方案中,所述靶向部分靶向選自以下的靶點:生長因數及其受體、細胞因數及其受體、細胞表面抗原、免疫檢查點分子、激素和其他體內生物活性成分。本發明的靶向分子又稱為雙功能分子,其可以起到同時阻斷TGF-β信號通路和特異性結合特定靶點的雙重作用。In yet another aspect, the present invention provides a targeting molecule comprising a TGFBR2-ECD mutant of the present invention and a targeting moiety covalently linked to the N-terminus of the mutant. In one embodiment, the targeting moiety targets a target selected from the group consisting of growth factors and their receptors, cytokines and their receptors, cell surface antigens, immune checkpoint molecules, hormones, and other biologically active components in vivo . The targeting molecule of the present invention is also called a bifunctional molecule, which can play a dual role of simultaneously blocking the TGF-β signaling pathway and specifically binding to a specific target.
靶向部分和TGFBR2-ECD突變體可以以任何方式共價連接形成靶向分子。例如,可以利用DNA重組技術將靶向部分中的一個或多個多肽與突變體以重組多肽或蛋白的方式共價連接,也可以利用化學偶聯或酶催化偶聯的方法將靶向部分共價連接。The targeting moiety and the TGFBR2-ECD mutant can be covalently linked in any manner to form the targeting molecule. For example, one or more polypeptides in the targeting moiety can be covalently linked to the mutant in the form of recombinant polypeptides or proteins using DNA recombination technology, or the targeting moiety can be covalently linked by chemical coupling or enzymatic coupling methods. price connection.
在一實施方案中,所述靶向部分包含一個或多個多肽,並且其中至少一個多肽的C末端與所述突變體的N末端共價連接形成融合多肽。In one embodiment, the targeting moiety comprises one or more polypeptides, and wherein the C-terminus of at least one polypeptide is covalently linked to the N-terminus of the mutant to form a fusion polypeptide.
在一些實施方案中,所述靶向分子還包含所述靶向部分和所述突變體之間的接頭。優選的接頭為肽接頭。優選地,所述接頭為(G 4S) nG,其中n為2-6的整數,優選為3-5的整數,更優選地為4。 In some embodiments, the targeting molecule further comprises a linker between the targeting moiety and the mutant. Preferred linkers are peptide linkers. Preferably, the linker is (G 4 S) n G, wherein n is an integer of 2-6, preferably an integer of 3-5, more preferably 4.
靶向部分targeting moiety
靶向部分可以與其靶點特異性結合。在優選的實施方案中,靶向部分可以靶向腫瘤特異性標誌物、腫瘤幹細胞、腫瘤微環境、免疫檢查點或腫瘤形成調控機制。靶向部分的靶點可以包括例如生長因數或其受體、細胞因數或其受體、細胞表面抗原、免疫檢查點分子、激素或者其他體內生物活性成分等。免疫檢測點分子可以包括例如PD1、CTLA4、LAG-3、BTLA、TIM-2、LAIR1、PD-L1、B7-DC、B7-H3、B7-H4、HVEM和TIM-4。在一優選實施方案中,靶向部分靶向腫瘤微環境,例如可以靶向本文所述的細胞因數或其受體或者生長因數或其受體。靶向部分的靶點的實例可以包括但不限於:CD13、CD19、CD22、CD25、CD27、CD30/TNFRSF8、CD33、CD37、CD44v6、CD56、CD70、CD71、CD74、CD79b、CD117/KIT、CD123、CD138、CD142、CD174、CD227/MUC1、CD352、CLDN18.2、DLL3、CN33、GPNMB、ENPP3、Nectin-4、HER2/ErbB2、EGFR、FGFR、VEGFR、HGFR、PDGFR、VEGF、HGF、FGF、FGF-2、PDGF、EGF、Galectin-3、SLC44A4/AGS-5、CEACAM5、PSMA、TIM1、LY6E、LIV1、SLITRK6、SLAMF7/CS1、BCMA、AXL、NaPi2B、GCC、STEAP1、MUC16、Mesothelin、ETBR、EphA2、5T4、FOLR1、LAMP1、Cadherin 6、CA6、Integrin αV、TDGF1、Ephrin A4、PTK7、NOTCH3、C4.4A、FLT3、PD1、CTLA4、LAG-3、BTLA、TIM-2、LAIR1、PD-L1、B7-DC、B7-H3、B7-H4、HVEM和TIM-4。A targeting moiety can specifically bind to its target. In preferred embodiments, targeting moieties may target tumor specific markers, tumor stem cells, tumor microenvironment, immune checkpoints, or tumorigenesis regulatory mechanisms. Targets of targeting moieties may include, for example, growth factors or their receptors, cytokines or their receptors, cell surface antigens, immune checkpoint molecules, hormones, or other biologically active components in vivo, and the like. Immune checkpoint molecules can include, for example, PD1, CTLA4, LAG-3, BTLA, TIM-2, LAIR1, PD-L1, B7-DC, B7-H3, B7-H4, HVEM, and TIM-4. In a preferred embodiment, the targeting moiety targets the tumor microenvironment, eg, a cytokine or its receptor or a growth factor or its receptor as described herein can be targeted. Examples of targets of targeting moieties may include, but are not limited to: CD13, CD19, CD22, CD25, CD27, CD30/TNFRSF8, CD33, CD37, CD44v6, CD56, CD70, CD71, CD74, CD79b, CD117/KIT, CD123, CD138, CD142, CD174, CD227/MUC1, CD352, CLDN18.2, DLL3, CN33, GPNMB, ENPP3, Nectin-4, HER2/ErbB2, EGFR, FGFR, VEGFR, HGFR, PDGFR, VEGF, HGF, FGF, FGF- 2. PDGF, EGF, Galectin-3, SLC44A4/AGS-5, CEACAM5, PSMA, TIM1, LY6E, LIV1, SLITRK6, SLAMF7/CS1, BCMA, AXL, NaPi2B, GCC, STEAP1, MUC16, Mesothelin, ETBR, EphA2, 5T4, FOLR1, LAMP1, Cadherin 6, CA6, Integrin αV, TDGF1, Ephrin A4, PTK7, NOTCH3, C4.4A, FLT3, PD1, CTLA4, LAG-3, BTLA, TIM-2, LAIR1, PD-L1, B7 - DC, B7-H3, B7-H4, HVEM and TIM-4.
可以用於本發明的靶向部分包括但不限於例如,抗體或其抗原結合片段、擬抗體、配體、體內活性蛋白的配體結合結構域或功能活性結構域等。在一些實施方案中,靶向部分為配體。在一實施方案中,所述配體為細胞表面抗原、細胞因數、生長因數或激素。細胞表面抗原可以包括腫瘤特異性抗原和腫瘤相關抗原。細胞因數可以選自:G-CSF、GM-CSF、eotaxin/CCL11、MCP-1/CCL2、MIP-1α/CCL4、RANTES/CCL5、IL-1、IL-2、IL-4、IL-5、IL-6、IL-7、IL-8、IL-10、IL-12、IL-13、IL-15、IL-17、IL-18、IL-23、INFα、INFβ、INFγ和TNFα和TNFβ。生長因數可以選自:VEGF、HGF、FGF、FGF-2、PDGF、IGF、TGF、NGF、EPO和EGF。激素可以為肽類激素或甾體激素,優選為肽類激素。在一些實施方案中,靶向部分為體內活性蛋白的配體結合結構域。體內活性蛋白可以為受體(例如T細胞受體或其共受體、細胞因數受體、生長因數受體、激素受體等)、激酶、離子通道或其他參與信號轉導的蛋白。優選地,所述配體結合結構域或功能性結構域為T細胞受體、細胞因數受體、生長因數受體、激素受體的配體結合結構域或功能性結構域。配體、配體結合結構域或功能活性結構域可以是野生型或突變型。Targeting moieties that can be used in the present invention include, but are not limited to, for example, antibodies or antigen-binding fragments thereof, mimetibodies, ligands, ligand binding domains or functionally active domains of in vivo active proteins, and the like. In some embodiments, the targeting moiety is a ligand. In one embodiment, the ligand is a cell surface antigen, cytokine, growth factor or hormone. Cell surface antigens can include tumor-specific antigens and tumor-associated antigens. Cytokines may be selected from: G-CSF, GM-CSF, eotaxin/CCL11, MCP-1/CCL2, MIP-1α/CCL4, RANTES/CCL5, IL-1, IL-2, IL-4, IL-5, IL-6, IL-7, IL-8, IL-10, IL-12, IL-13, IL-15, IL-17, IL-18, IL-23, INFα, INFβ, INFγ and TNFα and TNFβ. Growth factors may be selected from: VEGF, HGF, FGF, FGF-2, PDGF, IGF, TGF, NGF, EPO and EGF. The hormone may be a peptide hormone or a steroid hormone, preferably a peptide hormone. In some embodiments, the targeting moiety is the ligand binding domain of an in vivo active protein. In vivo active proteins can be receptors (eg, T cell receptors or their co-receptors, cytokine receptors, growth factor receptors, hormone receptors, etc.), kinases, ion channels, or other proteins involved in signal transduction. Preferably, the ligand binding domain or functional domain is a ligand binding domain or functional domain of a T cell receptor, cytokine receptor, growth factor receptor, hormone receptor. The ligand, ligand binding domain or functionally active domain can be wild-type or mutant.
在一實施方案中,所述靶向部分為抗體或其抗原結合片段、擬抗體、配體、體內活性蛋白的配體結合結構域或功能活性結構域。In one embodiment, the targeting moiety is an antibody or antigen-binding fragment thereof, mimetibody, ligand, ligand binding domain or functionally active domain of an in vivo active protein.
在一些實施方案中,靶向部分為Fc片段。優選地,靶向部分為人IgG1的Fc片段。可以修飾Fc片段以獲得期望的體內活性,例如延長靶向分子的血清半衰期,或者增強或削弱靶向分子的效應功能(例如抗體依賴的細胞介導的毒性作用(ADCC)和補體依賴的細胞毒性作用(CDC))。在一些實施方案中,人IgG1的Fc片段包含N297A突變,即人IgG1重鏈第297位的天冬醯胺(N)被突變為丙氨酸(A)。包含N297A突變的Fc片段失去與FcγR的結合能力,從而消除Fc片段介導的ADCC。在一實施方案中,人IgG1的Fc片段包含SEQ ID NO: 53的氨基酸序列。在一實施方案中,將人IgG1的Fc片段任選地通過接頭融合至本發明的TGFBR2-ECD突變體的N末端以提供Fc-TGFBR2-ECD融合蛋白。在一具體實施方案中,所述Fc-TGFBR2-ECD融合蛋白包含SEQ ID NO: 52的氨基酸序列。In some embodiments, the targeting moiety is an Fc fragment. Preferably, the targeting moiety is the Fc fragment of human IgGl. Fc fragments can be modified to achieve the desired in vivo activity, such as prolonging the serum half-life of the targeted molecule, or to enhance or attenuate the effector functions of the targeted molecule (such as antibody-dependent cell-mediated toxicity (ADCC) and complement-dependent cytotoxicity) effect (CDC)). In some embodiments, the Fc fragment of human IgGl comprises the N297A mutation, ie the asparagine (N) at position 297 of the human IgGl heavy chain is mutated to alanine (A). The Fc fragment containing the N297A mutation lost its ability to bind to FcγR, thereby abrogating Fc fragment-mediated ADCC. In one embodiment, the Fc fragment of human IgGl comprises the amino acid sequence of SEQ ID NO:53. In one embodiment, the Fc fragment of human IgGl is fused to the N-terminus of the TGFBR2-ECD mutants of the invention, optionally via a linker, to provide an Fc-TGFBR2-ECD fusion protein. In a specific embodiment, the Fc-TGFBR2-ECD fusion protein comprises the amino acid sequence of SEQ ID NO:52.
優選地,靶向部分為抗體或其抗原結合片段,例如與上述靶點特異性結合的抗體或其抗原結合片段。抗體或其抗原結合片段可以選自合成抗體、重組產生的抗體、多特異性抗體、雙特異性抗體、人抗體、非人抗體、人源化抗體、嵌合抗體、胞內抗體、單域抗體、Fab片段、Fab’片段、F(ab’) 2片段、Fv片段、dsFv片段、Fd片段、Fd’片段、scFv、scFab、雙抗體。在一優選實施方案中,靶向部分為靶向腫瘤微環境的抗體或其抗原結合片段。在一具體實施方案中,所述靶向部分為抗PD-L1抗體或其抗原結合片段。所述抗PD-L1抗體包括但不限於MSB0010718C、MEDI4736、BMS-936559、MPDL3280A以及WO 2019/233462中所描述的抗PD-L1抗體。 Preferably, the targeting moiety is an antibody or antigen-binding fragment thereof, such as an antibody or antigen-binding fragment thereof that specifically binds to the above-mentioned target. The antibody or antigen-binding fragment thereof may be selected from the group consisting of synthetic antibodies, recombinantly produced antibodies, multispecific antibodies, bispecific antibodies, human antibodies, non-human antibodies, humanized antibodies, chimeric antibodies, intrabodies, single domain antibodies , Fab fragment, Fab' fragment, F(ab') 2 fragment, Fv fragment, dsFv fragment, Fd fragment, Fd' fragment, scFv, scFab, diabody. In a preferred embodiment, the targeting moiety is an antibody or antigen-binding fragment thereof that targets the tumor microenvironment. In a specific embodiment, the targeting moiety is an anti-PD-L1 antibody or antigen-binding fragment thereof. The anti-PD-L1 antibodies include, but are not limited to, MSB0010718C, MEDI4736, BMS-936559, MPDL3280A, and the anti-PD-L1 antibodies described in WO 2019/233462.
在一些實施方案中,靶向部分包含抗PD-L1抗體或其抗原結合片段。優選地,所述抗PD-L1抗體或其抗原結合片段如上所述。In some embodiments, the targeting moiety comprises an anti-PD-L1 antibody or antigen-binding fragment thereof. Preferably, the anti-PD-L1 antibody or antigen-binding fragment thereof is as described above.
在一實施方案中,靶向部分包含抗體的V H和V L,並且V H和V L的C末端各自與兩個突變體的N末端共價連接。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。 In one embodiment, the targeting moiety comprises the VH and VL of the antibody, and the C-termini of VH and VL are each covalently linked to the N-terminus of the two mutants. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein.
在一實施方案中,靶向部分包含第一抗體的V H與V L和第二抗體的V H與V L,並且兩個V H的C末端各自與兩個突變體的N末端共價連接。第一抗體和第二抗體可以相同或不同。在一實施方案中,所述第一抗體和第二抗體為如本文所述的抗PD-L1抗體。 In one embodiment, the targeting moiety comprises the VH and VL of the first antibody and the VH and VL of the second antibody, and the C-termini of the two VHs are each covalently linked to the N-terminus of the two mutants . The first antibody and the second antibody can be the same or different. In one embodiment, the first and second antibodies are anti-PD-L1 antibodies as described herein.
在一實施方案中,靶向部分包含抗體的V H-C H1和輕鏈,並且C H1和C L的C末端各自與兩個突變體的N末端共價連接。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。 In one embodiment, the targeting moiety comprises the VH - CH1 and light chains of the antibody, and the C -termini of CH1 and CL are each covalently linked to the N-termini of the two mutants. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein.
在一實施方案中,靶向部分包含第一抗體的V H-C H1與輕鏈和第二抗體的V H-C H1與輕鏈,並且兩個V H-C H1的C末端各自與兩個突變體的N末端共價連接。第一抗體和第二抗體可以相同或不同。在一實施方案中,所述第一抗體和第二抗體為如本文所述的抗PD-L1抗體。 In one embodiment, the targeting moiety comprises the VH -CH1 and light chain of the first antibody and the VH - CH1 and light chain of the second antibody, and the C -terminus of both VH - CH1 Each is covalently linked to the N-terminus of the two mutants. The first antibody and the second antibody can be the same or different. In one embodiment, the first and second antibodies are anti-PD-L1 antibodies as described herein.
在一實施方案中,靶向部分包含第一抗體的重鏈與輕鏈和第二抗體的重鏈與輕鏈,並且兩個重鏈的C末端各自與兩個突變體的N末端共價連接。第一抗體和第二抗體可以相同或不同。在一實施方案中,所述第一抗體和第二抗體為如本文所述的抗PD-L1抗體。In one embodiment, the targeting moiety comprises the heavy and light chains of the first antibody and the heavy and light chains of the second antibody, and the C-termini of the two heavy chains are each covalently linked to the N-termini of the two mutants . The first antibody and the second antibody can be the same or different. In one embodiment, the first and second antibodies are anti-PD-L1 antibodies as described herein.
抗PD-L1抗體Anti-PD-L1 antibody
在一些優選的實施方案中,靶向部分為抗PD-L1抗體或其抗原結合片段。示例性抗PD-L1抗體包括但不限於MSB0010718C、MEDI4736、BMS-936559、MPDL3280A以及WO 2019/233462中所描述的抗PD-L1抗體。在一些優選的實施方案中,所述抗PD-L1抗體為WO 2019/233462中所描述的抗PD-L1抗體B10、H12和B11,其相關內容整體援引加入本文。In some preferred embodiments, the targeting moiety is an anti-PD-L1 antibody or antigen-binding fragment thereof. Exemplary anti-PD-L1 antibodies include, but are not limited to, MSB0010718C, MEDI4736, BMS-936559, MPDL3280A, and the anti-PD-L1 antibodies described in WO 2019/233462. In some preferred embodiments, the anti-PD-L1 antibodies are the anti-PD-L1 antibodies B10, H12 and B11 described in WO 2019/233462, the relevant contents of which are incorporated herein by reference in their entirety.
在一些實施方案中,所述抗PD-L1抗體為B10抗體,其包含重鏈可變區和輕鏈可變區,其中In some embodiments, the anti-PD-L1 antibody is a B10 antibody comprising a heavy chain variable region and a light chain variable region, wherein
所述重鏈可變區包含: HCDR1,其包含SEQ ID NO: 16的氨基酸序列, HCDR2,其包含SEQ ID NO: 17的氨基酸序列,和 HCDR3,其包含SEQ ID NO: 18的氨基酸序列; 所述輕鏈可變區包含: LCDR1,其包含SEQ ID NO: 20的氨基酸序列, LCDR2,其包含SEQ ID NO: 21的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 22的氨基酸序列。 The heavy chain variable region comprises: HCDR1 comprising the amino acid sequence of SEQ ID NO: 16, HCDR2 comprising the amino acid sequence of SEQ ID NO: 17, and HCDR3 comprising the amino acid sequence of SEQ ID NO: 18; The light chain variable region comprises: LCDR1, which comprises the amino acid sequence of SEQ ID NO: 20, LCDR2 comprising the amino acid sequence of SEQ ID NO: 21, and LCDR3 comprising the amino acid sequence of SEQ ID NO:22.
在又一實施方案中,所述抗PD-L1抗體為B11抗體,其包含重鏈可變區和輕鏈可變區,其中 所述重鏈可變區包含: HCDR1,其包含SEQ ID NO: 24的氨基酸序列, HCDR2,其包含SEQ ID NO: 25的氨基酸序列,和 HCDR3,其包含SEQ ID NO: 26的氨基酸序列; 所述輕鏈可變區包含: LCDR1,其包含SEQ ID NO: 28的氨基酸序列, LCDR2,其包含SEQ ID NO: 29的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 30的氨基酸序列。 In yet another embodiment, the anti-PD-L1 antibody is a B11 antibody comprising a heavy chain variable region and a light chain variable region, wherein The heavy chain variable region comprises: HCDR1 comprising the amino acid sequence of SEQ ID NO: 24, HCDR2 comprising the amino acid sequence of SEQ ID NO: 25, and HCDR3 comprising the amino acid sequence of SEQ ID NO: 26; The light chain variable region comprises: LCDR1, which comprises the amino acid sequence of SEQ ID NO: 28, LCDR2, which comprises the amino acid sequence of SEQ ID NO: 29, and LCDR3 comprising the amino acid sequence of SEQ ID NO:30.
在另一實施方案中,所述抗PD-L1抗體為H12抗體,其包含重鏈可變區和輕鏈可變區,其中 所述重鏈可變區包含: HCDR1,其包含SEQ ID NO: 32的氨基酸序列, HCDR2,其包含SEQ ID NO: 33的氨基酸序列,和 HCDR3,其包含SEQ ID NO: 34的氨基酸序列; 所述輕鏈可變區包含: LCDR1,其包含SEQ ID NO: 36的氨基酸序列, LCDR2,其包含SEQ ID NO: 37的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 38的氨基酸序列。 In another embodiment, the anti-PD-L1 antibody is an H12 antibody comprising a heavy chain variable region and a light chain variable region, wherein The heavy chain variable region comprises: HCDR1 comprising the amino acid sequence of SEQ ID NO: 32, HCDR2 comprising the amino acid sequence of SEQ ID NO: 33, and HCDR3 comprising the amino acid sequence of SEQ ID NO: 34; The light chain variable region comprises: LCDR1, which comprises the amino acid sequence of SEQ ID NO: 36, LCDR2 comprising the amino acid sequence of SEQ ID NO: 37, and LCDR3 comprising the amino acid sequence of SEQ ID NO:38.
在又一實施方案中,B10抗體包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 19的氨基酸序列。在又一實施方案中,B10抗體包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 23的氨基酸序列。在一實施方案中,B11抗體包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 27的氨基酸序列。在又一實施方案中,B11抗體包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 31的氨基酸序列。在一實施方案中,H12抗體包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 35的氨基酸序列。在又一實施方案中,H12抗體包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 39的氨基酸序列。In yet another embodiment, the B10 antibody comprises a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 19. In yet another embodiment, the B10 antibody comprises a light chain variable region comprising the amino acid sequence of SEQ ID NO:23. In one embodiment, the B11 antibody comprises a heavy chain variable region comprising the amino acid sequence of SEQ ID NO:27. In yet another embodiment, the B11 antibody comprises a light chain variable region comprising the amino acid sequence of SEQ ID NO:31. In one embodiment, the H12 antibody comprises a heavy chain variable region comprising the amino acid sequence of SEQ ID NO:35. In yet another embodiment, the H12 antibody comprises a light chain variable region comprising the amino acid sequence of SEQ ID NO:39.
在又一實施方案中,B10、B11或H12抗體包含輕鏈恒定區,所述輕鏈恒定區包含SEQ ID NO: 40的氨基酸序列。在又一實施方案中,B10、B11或H12抗體還包含重鏈恒定區,所述重鏈恒定區包含SEQ ID NO: 41的氨基酸序列。In yet another embodiment, the B10, B11 or H12 antibody comprises a light chain constant region comprising the amino acid sequence of SEQ ID NO:40. In yet another embodiment, the B10, B11 or H12 antibody further comprises a heavy chain constant region comprising the amino acid sequence of SEQ ID NO:41.
在一實施方案中,B11抗體包含輕鏈,所述輕鏈包含SEQ ID NO: 42的氨基酸序列。在一些實施方案中,B11抗體包含重鏈,所述重鏈包含SEQ ID NO: 43的氨基酸序列。In one embodiment, the B11 antibody comprises a light chain comprising the amino acid sequence of SEQ ID NO:42. In some embodiments, the B11 antibody comprises a heavy chain comprising the amino acid sequence of SEQ ID NO:43.
融合多肽fusion polypeptide
在另一方面,本發明提供了一種融合多肽,其包含TGFBR2-ECD突變體和第一多肽,並且所述第一多肽的C末端與所述突變體的N末端共價連接。In another aspect, the present invention provides a fusion polypeptide comprising a TGFBR2-ECD mutant and a first polypeptide, wherein the C-terminus of the first polypeptide is covalently linked to the N-terminus of the mutant.
在一些實施方案中,所述第一多肽為如上所述的靶向部分。在一些實施方案中,所述第一多肽與其他的多肽形成如上所述的靶向部分。In some embodiments, the first polypeptide is a targeting moiety as described above. In some embodiments, the first polypeptide forms a targeting moiety as described above with other polypeptides.
在一些實施方案中,所述第一多肽包含抗體的至少一個重鏈可變區。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。在一具體實施方案中,所述第一多肽包含抗體的重鏈可變區,所述重鏈可變區包含選自SEQ ID NO: 19、27和35的氨基酸序列。在又一具體實施方案中,所述第一多肽還包含抗體的重鏈恒定區,所述重鏈恒定區包含SEQ ID NO: 41的氨基酸序列。In some embodiments, the first polypeptide comprises at least one heavy chain variable region of an antibody. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein. In a specific embodiment, the first polypeptide comprises a heavy chain variable region of an antibody comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 19, 27 and 35. In yet another specific embodiment, the first polypeptide further comprises a heavy chain constant region of an antibody, the heavy chain constant region comprising the amino acid sequence of SEQ ID NO:41.
在一些實施方案中,所述第一多肽包含抗體的重鏈。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。在一具體實施方案中,所述第一多肽包含抗體的重鏈,所述重鏈包含SEQ ID NO: 43的氨基酸序列。In some embodiments, the first polypeptide comprises the heavy chain of an antibody. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein. In a specific embodiment, the first polypeptide comprises the heavy chain of an antibody, the heavy chain comprising the amino acid sequence of SEQ ID NO:43.
在一些實施方案中,所述第一多肽包含抗體的至少一個輕鏈可變區。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。在一具體實施方案中,所述第一多肽包含抗體的輕鏈可變區,所述輕鏈可變區包含選自SEQ ID NO: 23、31和39的氨基酸序列。在又一具體實施方案中,所述第一多肽還包含抗體的輕鏈恒定區,所述輕鏈恒定區包含SEQ ID NO: 40的氨基酸序列。In some embodiments, the first polypeptide comprises at least one light chain variable region of an antibody. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein. In a specific embodiment, the first polypeptide comprises a light chain variable region of an antibody comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 23, 31 and 39. In yet another specific embodiment, the first polypeptide further comprises a light chain constant region of an antibody, the light chain constant region comprising the amino acid sequence of SEQ ID NO:40.
在一些實施方案中,所述第一多肽包含抗體的輕鏈。在一實施方案中,所述抗體為如本文所述的抗PD-L1抗體。在一具體實施方案中,所述第一多肽包含抗體的輕鏈,所述輕鏈包含SEQ ID NO: 42的氨基酸序列。In some embodiments, the first polypeptide comprises the light chain of an antibody. In one embodiment, the antibody is an anti-PD-L1 antibody as described herein. In a specific embodiment, the first polypeptide comprises the light chain of an antibody, the light chain comprising the amino acid sequence of SEQ ID NO:42.
在一些實施方案中,所述融合多肽還包含所述第一多肽和所述突變體之間的接頭。優選的接頭為肽接頭。優選地,所述接頭為(G 4S) nG,其中n為2-6的整數,優選為3-5的整數,更優選地為4。 In some embodiments, the fusion polypeptide further comprises a linker between the first polypeptide and the mutant. Preferred linkers are peptide linkers. Preferably, the linker is (G 4 S) n G, wherein n is an integer of 2-6, preferably an integer of 3-5, more preferably 4.
在一實施方案中,所述融合多肽包含選自SEQ ID NO: 9-15的氨基酸序列。In one embodiment, the fusion polypeptide comprises an amino acid sequence selected from the group consisting of SEQ ID NOs: 9-15.
融合蛋白fusion protein
在又一方面,提供了一種融合蛋白,其包含本發明的融合多肽和第二多肽。本發明的融合蛋白可以是如上所述的靶向分子,其包含靶向部分和本發明的突變體。在一實施方案中,當所述第二多肽在與所述第一多肽組合時,形成本文所述的靶向部分。In yet another aspect, there is provided a fusion protein comprising the fusion polypeptide of the present invention and a second polypeptide. The fusion protein of the present invention may be a targeting molecule as described above, comprising a targeting moiety and a mutant of the present invention. In one embodiment, the second polypeptide, when combined with the first polypeptide, forms a targeting moiety as described herein.
在一些實施方案中,所述第一多肽包含抗體的至少一個重鏈可變區,所述第二多肽包含抗體的至少一個輕鏈可變區。在一些實施方案中,所述第一多肽包含抗體的至少一個輕鏈可變區,所述第二多肽包含抗體的至少一個重鏈可變區。In some embodiments, the first polypeptide comprises at least one heavy chain variable region of an antibody and the second polypeptide comprises at least one light chain variable region of an antibody. In some embodiments, the first polypeptide comprises at least one light chain variable region of an antibody and the second polypeptide comprises at least one heavy chain variable region of an antibody.
在一具體實施方案中,所述第一多肽包含抗體的重鏈,所述第二多肽包含抗體的輕鏈。In a specific embodiment, the first polypeptide comprises an antibody heavy chain and the second polypeptide comprises an antibody light chain.
在一實施方案中,所述抗體為本文所述的抗PD-L1抗體或其抗原結合片段。因此,本發明還提供一種靶向PD-L1和TGF-β的雙功能融合蛋白,又可以稱為突變型抗PD-L1/TGF-β Trap。In one embodiment, the antibody is an anti-PD-L1 antibody or antigen-binding fragment thereof described herein. Therefore, the present invention also provides a bifunctional fusion protein targeting PD-L1 and TGF-β, which can also be called mutant anti-PD-L1/TGF-β Trap.
在一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈可變區,所述重鏈可變區包含 HCDR1,其包含SEQ ID NO: 16的氨基酸序列, HCDR2,其包含SEQ ID NO: 17的氨基酸序列, HCDR3,其包含SEQ ID NO: 18的氨基酸序列;和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含 LCDR1,其包含SEQ ID NO: 20的氨基酸序列, LCDR2,其包含SEQ ID NO: 21的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 22的氨基酸序列。 In one embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising HCDR1 comprising the amino acid sequence of SEQ ID NO: 16, HCDR2 comprising the amino acid sequence of SEQ ID NO: 17, HCDR3 comprising the amino acid sequence of SEQ ID NO: 18; and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising LCDR1, which comprises the amino acid sequence of SEQ ID NO: 20, LCDR2 comprising the amino acid sequence of SEQ ID NO: 21, and LCDR3 comprising the amino acid sequence of SEQ ID NO:22.
在又一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (i) 第一多肽,其包含重鏈可變區,其包含 HCDR1,其包含SEQ ID NO: 24的氨基酸序列, HCDR2,其包含SEQ ID NO: 25的氨基酸序列, HCDR3,其包含SEQ ID NO: 26的氨基酸序列;和 (ii) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含 LCDR1,其包含SEQ ID NO: 28的氨基酸序列, LCDR2,其包含SEQ ID NO: 29的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 30的氨基酸序列。 In yet another embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising HCDR1 comprising the amino acid sequence of SEQ ID NO: 24, HCDR2 comprising the amino acid sequence of SEQ ID NO: 25, HCDR3 comprising the amino acid sequence of SEQ ID NO: 26; and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising LCDR1, which comprises the amino acid sequence of SEQ ID NO: 28, LCDR2, which comprises the amino acid sequence of SEQ ID NO: 29, and LCDR3 comprising the amino acid sequence of SEQ ID NO:30.
在另一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (i) 第一多肽,其包含重鏈可變區,所述重鏈可變區包含 HCDR1,其包含SEQ ID NO: 32的氨基酸序列, HCDR2,其包含SEQ ID NO: 33的氨基酸序列, HCDR3,其包含SEQ ID NO: 34的氨基酸序列;和 (ii) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含 LCDR1,其包含SEQ ID NO: 36的氨基酸序列, LCDR2,其包含SEQ ID NO: 37的氨基酸序列,和 LCDR3,其包含SEQ ID NO: 38的氨基酸序列。 In another embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising HCDR1 comprising the amino acid sequence of SEQ ID NO: 32, HCDR2 comprising the amino acid sequence of SEQ ID NO: 33, HCDR3 comprising the amino acid sequence of SEQ ID NO: 34; and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising LCDR1, which comprises the amino acid sequence of SEQ ID NO: 36, LCDR2 comprising the amino acid sequence of SEQ ID NO: 37, and LCDR3 comprising the amino acid sequence of SEQ ID NO:38.
在一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 19的氨基酸序列,和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 23的氨基酸序列。 In one embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 19, and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising the amino acid sequence of SEQ ID NO: 23.
在又一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 27的氨基酸序列,和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 31的氨基酸序列。 In yet another embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 27, and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising the amino acid sequence of SEQ ID NO:31.
在另一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈可變區,所述重鏈可變區包含SEQ ID NO: 35的氨基酸序列,和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區,所述輕鏈可變區包含SEQ ID NO: 39的氨基酸序列。 In another embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region comprising the amino acid sequence of SEQ ID NO: 35, and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region comprising the amino acid sequence of SEQ ID NO:39.
在又一實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈可變區和重鏈恒定區,所述重鏈可變區包含選自SEQ ID NO: 19、27和35的氨基酸序列,所述重鏈恒定區包含SEQ ID NO: 41的氨基酸序列,和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈可變區和輕鏈恒定區,所述輕鏈可變區包含選自SEQ ID NO: 23、31和39的氨基酸序列,所述輕鏈恒定區包含SEQ ID NO: 40的氨基酸序列。 In yet another embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain variable region and a heavy chain constant region, the heavy chain variable region comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 19, 27 and 35, the heavy chain constant region comprising the amino acid sequence of SEQ ID NO: 41, and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain variable region and a light chain constant region, the light chain variable region comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 23, 31 and 39, the light chain constant region Contains the amino acid sequence of SEQ ID NO:40.
在一具體實施方案中,所述融合蛋白包含: (1) 融合多肽,從N末端到C末端,其包含: (ⅰ) 第一多肽,其包含重鏈,所述重鏈包含SEQ ID NO: 43的氨基酸序列,和 (ⅱ) 突變體,其包含選自SEQ ID NO: 2-8的氨基酸序列;以及 (2) 第二多肽,其包含輕鏈,所述輕鏈包含SEQ ID NO: 42的氨基酸序列。 In a specific embodiment, the fusion protein comprises: (1) A fusion polypeptide, from N-terminus to C-terminus, comprising: (i) a first polypeptide comprising a heavy chain comprising the amino acid sequence of SEQ ID NO: 43, and (ii) a mutant comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 2-8; and (2) a second polypeptide comprising a light chain comprising the amino acid sequence of SEQ ID NO:42.
在一些實施方案中,所述融合蛋白還包含所述第一多肽和所述突變體之間的接頭,優選地,所述接頭為(G 4S) nG,其中n為2-6的整數,優選為3-5的整數,更優選地為4。 In some embodiments, the fusion protein further comprises a linker between the first polypeptide and the mutant, preferably, the linker is (G 4 S) n G, wherein n is 2-6 Integer, preferably an integer from 3 to 5, more preferably 4.
在一實施方案中,所述融合蛋白形成二聚體。In one embodiment, the fusion protein forms a dimer.
腫瘤性疾病neoplastic disease
本發明的靶向分子、融合多肽、融合蛋白和藥物組合物可以用於治療和/或預防TGF-β家族相關通路引起的腫瘤、炎症、自身免疫等疾病。The targeting molecules, fusion polypeptides, fusion proteins and pharmaceutical compositions of the present invention can be used to treat and/or prevent tumors, inflammation, autoimmunity and other diseases caused by TGF-β family related pathways.
本發明還涉及本發明的靶向分子、融合多肽、融合蛋白或藥物組合物在製備用於治療和/或預防腫瘤性疾病的藥物中的用途。The present invention also relates to the use of the targeting molecule, fusion polypeptide, fusion protein or pharmaceutical composition of the present invention in the preparation of a medicament for the treatment and/or prevention of neoplastic diseases.
本發明還涉及一種治療和/或預防腫瘤性疾病的方法,其包括向有需要的個體給藥本申請的靶向分子、融合多肽、融合蛋白或藥物組合物。The present invention also relates to a method for treating and/or preventing neoplastic diseases, which comprises administering the targeting molecule, fusion polypeptide, fusion protein or pharmaceutical composition of the present application to an individual in need.
本發明的靶向分子、融合多肽、融合蛋白(特別是抗PD-L1/TGF-β Trap)或藥物組合物可以用於治療和/或預防腫瘤性疾病。可以預防和/或治療的優選的腫瘤性疾病(或癌症)包括一般對免疫治療有應答的癌症,特別是PD-L1陽性的癌症。可治療的癌症的非限制性的實例包括但不限於肺癌、卵巢癌、結腸癌、直腸癌、黑色素瘤、腎癌、膀胱癌、乳腺癌、肝癌、淋巴瘤、惡性血液病、頭頸癌、膠質瘤、胃癌、鼻咽癌、喉癌、宮頸癌、子宮體瘤和骨肉瘤。其他癌症的實例包括但不限於骨癌、胰腺癌、皮膚癌、前列腺癌、皮膚或眼內惡性黑色素瘤、子宮癌、肛區癌、睾丸癌、輸卵管癌、子宮內膜癌、陰道癌、陰戶癌、何傑金病、非何傑金氏淋巴瘤、食道癌、小腸癌、內分泌系統癌、甲狀腺癌、甲狀旁腺癌、腎上腺癌、軟組織肉瘤、尿道癌、陰莖癌、慢性或急性白血病,包括急性髓細胞樣白血病、慢性髓細胞樣白血病、急性成淋巴細胞性白血病、慢性淋巴細胞性白血病、兒童實體瘤、淋巴細胞性淋巴瘤、膀胱癌、腎或輸尿管癌、腎盂癌、中樞神經系統(CNS)腫瘤、原發性CNS淋巴瘤、腫瘤血管發生、脊柱腫瘤、腦幹神經膠質瘤、垂體腺瘤、卡波西肉瘤、表皮狀癌、鱗狀細胞癌、T細胞淋巴瘤、環境誘發的癌症,包括石棉誘發的癌症,以及所述癌症的組合。本發明的融合蛋白和藥物組合物也可用於治療轉移性癌,特別是表達PD-L1的轉移性癌。在又一實施方案中,所述腫瘤性疾病(或癌症)為肺癌、卵巢癌、結直腸癌、黑色素瘤、腎癌、膀胱癌、乳腺癌、肝癌、淋巴瘤、惡性血液病、頭頸癌、膠質瘤、胃癌、鼻咽癌、喉癌、宮頸癌、子宮體癌或骨肉瘤,特別是結直腸癌或非小細胞肺癌。The targeting molecule, fusion polypeptide, fusion protein (especially anti-PD-L1/TGF-β Trap) or pharmaceutical composition of the present invention can be used for the treatment and/or prevention of neoplastic diseases. Preferred neoplastic diseases (or cancers) that can be prevented and/or treated include cancers generally responsive to immunotherapy, particularly PD-L1 positive cancers. Non-limiting examples of treatable cancers include, but are not limited to, lung cancer, ovarian cancer, colon cancer, rectal cancer, melanoma, kidney cancer, bladder cancer, breast cancer, liver cancer, lymphoma, hematological malignancies, head and neck cancer, glioblastoma tumor, gastric cancer, nasopharyngeal cancer, laryngeal cancer, cervical cancer, uterine corpus tumor and osteosarcoma. Examples of other cancers include, but are not limited to, bone cancer, pancreatic cancer, skin cancer, prostate cancer, skin or intraocular malignant melanoma, uterine cancer, anal cancer, testicular cancer, fallopian tube cancer, endometrial cancer, vaginal cancer, vulva Cancer, Hodgkin's disease, non-Hodgkin's lymphoma, esophagus, small bowel, endocrine system, thyroid, parathyroid, adrenal, soft tissue sarcoma, urethra, penis, chronic or acute leukemia , including acute myeloid leukemia, chronic myeloid leukemia, acute lymphoblastic leukemia, chronic lymphocytic leukemia, childhood solid tumors, lymphocytic lymphoma, bladder cancer, kidney or ureter cancer, renal pelvis cancer, central nervous system Systemic (CNS) tumors, primary CNS lymphoma, tumor angiogenesis, spinal tumors, brain stem gliomas, pituitary adenomas, Kaposi's sarcoma, epidermal carcinoma, squamous cell carcinoma, T-cell lymphoma, environmental Induced cancers, including asbestos-induced cancers, and combinations of such cancers. The fusion protein and pharmaceutical composition of the present invention can also be used to treat metastatic cancer, especially metastatic cancer expressing PD-L1. In yet another embodiment, the neoplastic disease (or cancer) is lung cancer, ovarian cancer, colorectal cancer, melanoma, kidney cancer, bladder cancer, breast cancer, liver cancer, lymphoma, hematological malignancies, head and neck cancer, Glioma, gastric cancer, nasopharyngeal cancer, laryngeal cancer, cervical cancer, uterine body cancer or osteosarcoma, especially colorectal cancer or non-small cell lung cancer.
在一些實施方案中,本發明的抗PD-L1/TGF-β Trap可以用於治療癌症。在一些實施方案中,所述癌症為PD-L1陽性的癌症。在一些實施方案中,所述癌症選自肺癌、卵巢癌、結直腸癌、黑色素瘤、腎癌、膀胱癌、乳腺癌、肝癌、淋巴瘤、惡性血液病、頭頸癌、膠質瘤、胃癌、鼻咽癌、喉癌、宮頸癌、子宮體癌、骨肉瘤、結直腸癌和非小細胞肺癌。In some embodiments, the anti-PD-L1/TGF-β Traps of the present invention can be used to treat cancer. In some embodiments, the cancer is a PD-L1 positive cancer. In some embodiments, the cancer is selected from the group consisting of lung cancer, ovarian cancer, colorectal cancer, melanoma, kidney cancer, bladder cancer, breast cancer, liver cancer, lymphoma, hematological malignancies, head and neck cancer, glioma, gastric cancer, nasal Pharyngeal cancer, laryngeal cancer, cervical cancer, endometrial cancer, osteosarcoma, colorectal cancer and non-small cell lung cancer.
核酸、載體和宿主細胞Nucleic Acids, Vectors and Host Cells
在另一方面,本發明提供分離的核酸分子,其編碼本發明的突變體、靶向分子、融合多肽或融合蛋白。所述核酸分子的核苷酸序列可以針對用於表達的宿主細胞進行密碼子優化。In another aspect, the present invention provides isolated nucleic acid molecules encoding mutants, targeting molecules, fusion polypeptides or fusion proteins of the invention. The nucleotide sequence of the nucleic acid molecule can be codon-optimized for the host cell used for expression.
本發明還提供一種表達載體,其包含至少一種本發明的核酸分子。The present invention also provides an expression vector comprising at least one nucleic acid molecule of the present invention.
本發明的一方面還提供一種宿主細胞,其包含至少一種本發明的核酸分子或表達載體。One aspect of the present invention also provides a host cell comprising at least one nucleic acid molecule or expression vector of the present invention.
融合多肽的生產方法Production method of fusion polypeptide
本發明的又一方面還涉及一種方法,其用於生產本發明的突變體、靶向分子、融合多肽或融合蛋白,所述方法包括: (i) 在適合核酸分子或表達載體表達的情況下培養本發明的宿主細胞,和 (ii) 分離並純化由本發明的突變體、靶向分子、融合多肽或融合蛋白。 Yet another aspect of the present invention also relates to a method for producing the mutant, targeting molecule, fusion polypeptide or fusion protein of the present invention, the method comprising: (i) culturing the host cell of the invention under conditions suitable for expression of the nucleic acid molecule or expression vector, and (ii) isolating and purifying the mutant, targeting molecule, fusion polypeptide or fusion protein of the present invention.
藥物組合物pharmaceutical composition
本發明還提供一種藥物組合物,其包含本發明的融合蛋白以及藥學上可接受的載劑。優選地,所述藥物用於治療和/或預防TGF-β家族相關通路引起的腫瘤、炎症、自身免疫等疾病。更優選地,所述藥物用於治療和/或預防如上所述的腫瘤性疾病。The present invention also provides a pharmaceutical composition comprising the fusion protein of the present invention and a pharmaceutically acceptable carrier. Preferably, the drug is used to treat and/or prevent tumors, inflammation, autoimmunity and other diseases caused by TGF-β family related pathways. More preferably, the medicament is for the treatment and/or prevention of neoplastic diseases as described above.
本文使用的「藥學上可接受的載劑」包括生理學相容的任何和所有的溶劑、分散介質、包衣、抗細菌劑和抗真菌劑、等滲劑和吸收延遲劑等。優選地,該載劑適合於靜脈內、肌內、皮下、腸胃外、脊柱或表皮施用(如通過注射或輸注)。根據施用途徑,可將活性化合物,例如本發明的融合蛋白,包裹於一種材料中,以保護其免受可使該化合物失活的酸和其他天然條件的作用。As used herein, "pharmaceutically acceptable carrier" includes any and all solvents, dispersion media, coatings, antibacterial and antifungal agents, isotonic and absorption delaying agents, and the like that are physiologically compatible. Preferably, the carrier is suitable for intravenous, intramuscular, subcutaneous, parenteral, spinal or epidermal administration (eg, by injection or infusion). Depending on the route of administration, an active compound, such as a fusion protein of the present invention, can be encapsulated in a material to protect it from the action of acids and other natural conditions that can inactivate the compound.
本發明的藥物組合物也可含有藥學上可接受的抗氧化劑。藥學上可接受的抗氧化劑的例子包括:(1)水溶性抗氧化劑,如抗壞血酸、鹽酸半胱氨酸、硫酸氫鈉、焦亞硫酸鈉,亞硫酸鈉等;(2)油溶性抗氧化劑,如棕櫚酸抗壞血酸酯、丁羥茴醚(BHA)、丁羥甲苯(BHT)、卵磷脂、沒食子酸丙酯、α-生育酚等;和(3)金屬螯合劑,如檸檬酸、乙二胺四乙酸(EDTA)、山梨糖醇、酒石酸、磷酸等。The pharmaceutical compositions of the present invention may also contain pharmaceutically acceptable antioxidants. Examples of pharmaceutically acceptable antioxidants include: (1) water-soluble antioxidants such as ascorbic acid, cysteine hydrochloride, sodium bisulfate, sodium metabisulfite, sodium sulfite, etc.; (2) oil-soluble antioxidants such as ascorbic acid palmitate Esters, butylated hydroxyanisole (BHA), butylated hydroxytoluene (BHT), lecithin, propyl gallate, α-tocopherol, etc.; and (3) metal chelators, such as citric acid, EDTA (EDTA), sorbitol, tartaric acid, phosphoric acid, etc.
這些組合物還可含有佐劑,如防腐劑、潤濕劑、乳化劑和分散劑。These compositions may also contain adjuvants such as preservatives, wetting agents, emulsifying agents and dispersing agents.
可以通過滅菌程式或通過包含諸如對羥基苯甲酸酯、氯代丁醇、苯酚山梨酸等各種抗細菌劑和抗真菌劑確保防止存在微生物。在很多情況下,組合物中優選包含等滲劑,例如,糖、多元醇例如甘露糖醇、山梨糖醇或氧化鈉。通過在組合物中加入延遲吸收劑,例如單硬脂酸鹽和明膠,可實現注射型藥物延長的吸收。Prevention of the presence of microorganisms can be ensured by sterilization procedures or by the inclusion of various antibacterial and antifungal agents such as parabens, chlorobutanol, phenol sorbic acid, and the like. In many cases, it is preferred to include isotonic agents, for example, sugars, polyols such as mannitol, sorbitol, or sodium oxide in the composition. Prolonged absorption of the injectable drug can be brought about by including in the composition an agent that delays absorption, for example, monostearate salts and gelatin.
藥學上可接受的載劑包括無菌水溶液或分散液和用於臨時製備無菌注射液或分散液的粉末劑。這些用於藥學活性物質的介質和試劑的使用是本領域公知的。常規介質或試劑,除了任何與活性化合物不相容的範圍外,都可能在本發明的藥物組合物中。還可以向組合物中摻入補充的活性化合物。Pharmaceutically acceptable carriers include sterile aqueous solutions or dispersions and powders for the extemporaneous preparation of sterile injectable solutions or dispersion. The use of these media and agents for pharmaceutically active substances is well known in the art. Conventional media or agents, except to any extent incompatible with the active compound, are possible in the pharmaceutical compositions of the present invention. Supplementary active compounds can also be incorporated into the compositions.
治療性組合物一般必須是無菌的並且在製備和貯存條件下穩定的。可以將組合物配製成溶液、微乳狀液、脂質體或其他適合高藥物濃度的有序結構。載劑可以是含有例如水、乙醇、多元醇(例如,甘油、丙二醇和液態聚乙二醇等)及其合適的混合物的溶劑或分散劑。例如,通過使用包衣,例如卵磷脂,在分散液的情況下通過保持所需的顆粒大小,以及通過使用表面活性劑,可以保持適當的流動性。Therapeutic compositions must generally be sterile and stable under the conditions of manufacture and storage. The compositions can be formulated as solutions, microemulsions, liposomes, or other ordered structures suitable for high drug concentrations. The carrier can be a solvent or dispersant containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. Proper fluidity can be maintained, for example, by the use of coatings such as lecithin, by the maintenance of the desired particle size in the case of dispersions, and by the use of surfactants.
通過將活性化合物以需要的量混入合適的溶劑中,並且根據需要加入以上列舉的成分中的一種或其組合,接著無菌微過濾,可製備無菌注射液。通常,通過將活性化合物摻入到含有基本分散介質和上面所列其他所需成分的無菌載劑中製備分散劑。對於用於製備無菌注射液的無菌粉末劑,優選的製備方法是真空乾燥和冷凍乾燥(凍幹),由其預先無菌過濾的溶液得到活性成分加任何額外所需成分的粉末。Sterile injectable solutions can be prepared by incorporating the active compound in the required amount in an appropriate solvent with one or a combination of ingredients enumerated above, as required, followed by sterile microfiltration. Generally, dispersions are prepared by incorporating the active compound into a sterile vehicle that contains a basic dispersion medium and the required other ingredients from those listed above. In the case of sterile powders for the preparation of sterile injectable solutions, the preferred methods of preparation are vacuum drying and freeze-drying (lyophilization) from previously sterile-filtered solutions thereof to obtain a powder of the active ingredient plus any additional desired ingredient.
可以與載劑材料組合製備單一劑量形式的活性成分的量根據所治療的物件和特定給藥方式而不同。可以與載劑材料組合製備單一劑量形式的活性成分的量一般是產生治療效果的組合物的量。通常,以100%計,這個量的範圍是大約0.01%至大約99%的活性成分,優選大約0.1%至大約70%,最優選大約1%至大約30%的活性成分,與藥學上可接受的載劑相組合。The amount of active ingredient that can be combined with carrier materials to prepare a single dosage form will vary depending upon the item being treated and the particular mode of administration. The amount of active ingredient that can be combined with a carrier material to prepare a single dosage form will generally be that amount of the composition which produces a therapeutic effect. Typically, on a 100% basis, this amount will range from about 0.01% to about 99% of the active ingredient, preferably from about 0.1% to about 70%, most preferably from about 1% to about 30% of the active ingredient, and is pharmaceutically acceptable carrier combination.
可以調節劑量方案以提供最佳的期望的反應(例如,治療反應)。例如,可以施用單一推注,可以隨時間施用幾次分開的劑量,或者根據治療狀況的緊急情況所需,可以按比例減小或增加劑量。特別有利的是將腸胃外組合物配製成容易給藥並且劑量均勻的劑量單位形式。此處使用的劑量單位形式是指適合作為單位劑量用於所治療的物件的物理不連續單位;每個單位含有預定量的活性化合物,經計算該預定量的活性化合物與需要的藥物載劑組合產生所需的治療效果。對本發明劑量單位形式的具體說明限定於且直接依賴於(a)活性化合物的獨特特性和要達到的特定治療效果,和(b)本領域中固有的對於配製這種用於治療個體敏感性的活性化合物的限制。Dosage regimens can be adjusted to provide the best desired response (eg, a therapeutic response). For example, a single bolus may be administered, several divided doses may be administered over time, or the dose may be proportionally reduced or increased as indicated by the exigencies of the therapeutic situation. It is especially advantageous to formulate parenteral compositions in dosage unit form for ease of administration and uniformity of dosage. Dosage unit form as used herein refers to physically discrete units suitable as unitary dosages for the items to be treated; each unit containing a predetermined quantity of active compound calculated to be in association with the required pharmaceutical carrier produce the desired therapeutic effect. The specific description of dosage unit forms of the present invention is limited to and depends directly on (a) the unique characteristics of the active compound and the particular therapeutic effect to be achieved, and (b) the inherent in the art for formulating such for the treatment of individual sensitivities. Restriction of Active Compounds.
對於本發明的融合蛋白或藥物組合物的給藥而言,劑量範圍為約0.0001至100 mg/kg,更通常為0.01至20 mg/kg受者體重。例如,劑量可以是0.3 mg/kg體重、1 mg/kg體重、3 mg/kg體重、5 mg/kg體重,10 mg/kg體重或20 mg/kg體重,或在1-20 mg/kg範圍內。示例性的治療方案需要每週給藥一次、每兩週一次、每三週一次、每四周一次、每月一次、每3個月一次、每3-6個月一次、或起始給藥間隔略短後期給藥間隔加長。給藥方式可以是靜脈滴注。For administration of the fusion proteins or pharmaceutical compositions of the invention, dosages range from about 0.0001 to 100 mg/kg, more typically 0.01 to 20 mg/kg of the subject's body weight. For example, the dose can be 0.3 mg/kg body weight, 1 mg/kg body weight, 3 mg/kg body weight, 5 mg/kg body weight, 10 mg/kg body weight or 20 mg/kg body weight, or in the range of 1-20 mg/kg body weight Inside. Exemplary treatment regimens require dosing once a week, once every two weeks, once every three weeks, once every four weeks, once a month, once every 3 months, once every 3-6 months, or with a shorter initial dosing interval. The short-term dosing interval was lengthened. The mode of administration can be intravenous drip.
或者,針對腫瘤的融合蛋白也可以作為持續釋放製劑來給藥,在此情況中需要頻率較低的給藥。劑量和頻率根據藥物分子在患者中的半衰期而不同。給藥劑量和頻率根據處理是預防性的還是治療性的而不同。在預防性應用中,在長時間內以較不頻繁的間隔給予相對較低的劑量。有些患者在餘生中持續接受處理。在治療性應用中,有時需要以較短的間隔給予較高的劑量,直到疾病的進展減輕或停止,優選直到患者表現為疾病症狀部分或完全改善。之後,可以以預防性方案給患者給藥。Alternatively, the tumor-targeted fusion protein can also be administered as a sustained release formulation, in which case less frequent dosing is required. Dosage and frequency vary according to the half-life of the drug molecule in the patient. The dose and frequency of administration will vary depending on whether the treatment is prophylactic or therapeutic. In prophylactic applications, relatively lower doses are administered at less frequent intervals over an extended period of time. Some patients continue to be treated for the rest of their lives. In therapeutic applications, it is sometimes necessary to administer higher doses at shorter intervals until the progression of the disease is lessened or stopped, preferably until the patient shows partial or complete improvement in the symptoms of the disease. Thereafter, the patient can be administered on a prophylactic regimen.
藥物組合物中活性成分的實際劑量水準可能改變,以獲得可有效實現對特定患者、組合物和給藥方式的所需治療反應,而對患者無毒性的活性成分的量。選擇的劑量水準取決於多種藥物代謝動力學因素,包括應用的本發明特定組合物的活性,給藥途徑,給藥時間,應用的特定化合物的排泄速率,治療的持續時間,與應用的特定組合物聯合應用的其他藥物、化合物和/或材料,接受治療的患者的年齡、性別、體重、狀況、總體健康情況和病史,以及醫學領域中公知的類似因素。The actual dosage level of the active ingredient in the pharmaceutical composition may vary to obtain an amount of the active ingredient effective to achieve the desired therapeutic response for a particular patient, composition, and mode of administration without toxicity to the patient. The dose level selected will depend on a variety of pharmacokinetic factors, including the activity of the particular composition of the invention employed, the route of administration, the time of administration, the rate of excretion of the particular compound employed, the duration of treatment, and the particular combination employed. other drugs, compounds and/or materials with which the drug is to be used in combination, the age, sex, weight, condition, general health and medical history of the patient being treated, and similar factors well known in the medical arts.
「有效量」是指這樣的劑量,其足以使疾病症狀的嚴重性降低,疾病無症狀期的頻率和持續時間增加,或者防止因疾病痛苦而引起的損傷或失能。例如,對於腫瘤的治療,相對於未接受治療的物件,「有效量」的本發明的融合蛋白或藥物組合物優選地將細胞生長或腫瘤生長抑制至少約10%,優選至少約20%,更優選至少約30%,更優選至少約40%,更優選至少約50%,更優選至少約60%,更優選至少約70%,更優選至少約80%。抑制腫瘤生長的能力可以在預測對人類腫瘤的療效的動物模型系統中評價。或者,也可以通過檢查抑制細胞生長的能力來評價,這種抑制可以通過本領域技術人員公知的試驗在體外測定。有效量的本發明的融合蛋白或藥物組合物能夠減小腫瘤大小,或者以其他方式緩解物件的症狀如預防和/或治療轉移或復發。本領域技術人員可以根據如下因素確定這種量,如物件的大小、物件症狀的嚴重性和選擇的特定組合物或給藥途徑。An "effective amount" refers to a dose sufficient to reduce the severity of symptoms of the disease, increase the frequency and duration of asymptomatic periods of the disease, or prevent damage or disability due to the suffering of the disease. For example, for the treatment of tumors, an "effective amount" of a fusion protein or pharmaceutical composition of the invention preferably inhibits cell growth or tumor growth by at least about 10%, preferably at least about 20%, and more Preferably at least about 30%, more preferably at least about 40%, more preferably at least about 50%, more preferably at least about 60%, more preferably at least about 70%, more preferably at least about 80%. The ability to inhibit tumor growth can be evaluated in animal model systems that predict efficacy against human tumors. Alternatively, it can also be assessed by examining the ability to inhibit cell growth, which can be determined in vitro by assays well known to those skilled in the art. An effective amount of the fusion protein or pharmaceutical composition of the present invention can reduce tumor size, or otherwise alleviate symptoms of the object, such as preventing and/or treating metastasis or recurrence. One skilled in the art can determine this amount based on factors such as the size of the article, the severity of the article's symptoms, and the particular composition or route of administration chosen.
本發明的融合蛋白或藥物組合物可以利用本領域公知的一種或多種方法通過一種或多種給藥途徑給藥。本領域技術人員應當理解,給藥途徑和/或方式根據期望的結果而不同。優選給藥途徑包括靜脈內、肌肉內、皮內、腹膜內、皮下、脊柱或其他腸胃外給藥途徑,例如注射或輸注。本文使用的短語「腸胃外給藥」是指除腸和局部給藥以外的給藥模式,通常是注射,包括但不限於靜脈內、肌內、動脈內、鞘內、囊內、眶內、心內、皮內、腹膜內、經氣管、皮下、表皮下、關節內、囊下、蛛網膜下、脊柱內、硬膜外和胸骨內注射和輸注。The fusion proteins or pharmaceutical compositions of the present invention can be administered by one or more routes of administration using one or more methods known in the art. It will be understood by those skilled in the art that the route and/or mode of administration will vary depending on the desired result. Preferred routes of administration include intravenous, intramuscular, intradermal, intraperitoneal, subcutaneous, spinal or other parenteral routes of administration, such as injection or infusion. The phrase "parenteral administration" as used herein refers to modes of administration other than enteral and topical administration, usually injection, including but not limited to intravenous, intramuscular, intraarterial, intrathecal, intracapsular, intraorbital , intracardiac, intradermal, intraperitoneal, transtracheal, subcutaneous, subepidermal, intraarticular, subcapsular, subarachnoid, intraspinal, epidural and intrasternal injection and infusion.
或者,本發明的融合蛋白或藥物組合物也可以通過非腸胃外途徑給藥,如局部、表皮或粘膜途徑給藥,例如,鼻內、經口、陰道、直腸、舌下或局部。Alternatively, the fusion proteins or pharmaceutical compositions of the present invention may also be administered by non-parenteral routes, such as topical, epidermal or mucosal routes, eg, intranasally, orally, vaginally, rectally, sublingually or topically.
活性化合物可以與保護化合物不被快速釋放的載劑一起製備,例如控釋製劑,包括植入物、透皮貼劑和微膠囊遞送系統。可以使用生物可降解的、生物相容的聚合物,例如乙烯乙酸乙烯酯、聚酐類、聚乙醇酸、膠原、聚原酸酯和聚乳酸。製備這樣的製劑的很多方法受專利保護或者通常為本領域技術人員所公知。The active compounds can be prepared with carriers that will protect the compound from rapid release, such as controlled release formulations, including implants, transdermal patches, and microencapsulated delivery systems. Biodegradable, biocompatible polymers can be used, such as ethylene vinyl acetate, polyanhydrides, polyglycolic acid, collagen, polyorthoesters, and polylactic acid. Many methods of preparing such formulations are patented or generally known to those skilled in the art.
本發明的融合蛋白還可以與諸如細胞毒素、放射性同位素或生物活性蛋白等治療性部分綴合。The fusion proteins of the present invention may also be conjugated to therapeutic moieties such as cytotoxins, radioisotopes or biologically active proteins.
細胞毒素包括對細胞有害(例如殺傷細胞)的任何試劑。Cytotoxins include any agent that is detrimental to cells (eg, kills cells).
實例包括但不限於:紫杉醇、細胞鬆弛素B、短桿菌肽D、溴化乙啶、吐根堿、絲裂黴素、表鬼臼毒吡喃葡糖苷、表鬼臼毒噻吩糖苷、長春新堿、長春堿、秋水仙素、阿黴素、柔紅黴素、二羥基炭疽菌素二酮、米托蒽醌、光輝黴素、放線菌素D、1-脫氫睾酮、糖皮質激素、普魯卡因、丁卡因、利多卡因、普萘洛爾和嘌呤黴素和它們的類似物或同系物。Examples include, but are not limited to: paclitaxel, cytochalasin B, gramicidin D, ethidium bromide, ipecacin, mitomycin, epipodophyllin glucopyranoside, epipodophyllin thiophene glycoside, vincristine Columbine, Vinca, Colchicine, Doxorubicin, Daunorubicin, Dihydroxyanthraxdione, Mitoxantrone, Spotomycin, Actinomycin D, 1-Dehydrotestosterone, Glucocorticoids, Procaine, tetracaine, lidocaine, propranolol and puromycin and their analogs or homologs.
可用於綴合的治療劑還包括,例如:抗代謝物(例如,氨甲喋呤、6-巰基嘌呤、6-硫代鳥嘌呤、阿糖胞苷、5-氟尿嘧啶、氨烯咪胺),烷化劑(例如,氮芥、苯丁酸氮芥、苯丙氨酸氮芥、卡莫司汀(BSNU)和洛莫司汀(CCNU)、環磷醯胺、白消安、二溴甘露糖醇、鏈唑黴素、絲裂黴素C和順-二氯二胺合鉑(II) (DDP)順鉑),氨茴黴素類(例如,柔紅菌素(以前稱為道諾黴素)和阿黴素),抗生素(例如,放線菌素D(以前稱為放線菌素)、博來黴素、光輝黴素和安麯黴素(AMC)),和抗有絲分裂劑(例如,長春新堿和長春堿)。Therapeutic agents that can be used for conjugation also include, for example, antimetabolites (eg, methotrexate, 6-mercaptopurine, 6-thioguanine, cytarabine, 5-fluorouracil, aminoenimidamine), alkylating agents (eg, chlorambucil, chlorambucil, chlorambucil, carmustine (BSNU) and lomustine (CCNU), cyclophosphamide, busulfan, dibromomannitol, Streptozotocin, mitomycin C, and cis-dichlorodiamineplatinum(II) (DDP) cisplatin), anthracyclines (eg, daunorubicin (formerly daunorubicin) and doxorubicin), antibiotics (eg, actinomycin D (previously known as actinomycin), bleomycin, fecomycin, and atramycin (AMC)), and antimitotics (eg, vinblastine and Changchun Kui).
能與本發明的融合蛋白綴合的治療性細胞毒素的其他優選例子包括倍癌黴素、刺孢黴素、美坦生、阿裡他汀、和它們的衍生物。Other preferred examples of therapeutic cytotoxins that can be conjugated to the fusion proteins of the present invention include duocarmycin, calicheamicin, maytansine, auristatin, and derivatives thereof.
可以利用本領域使用的接頭技術將細胞毒素與本發明的融合蛋白綴合,例如與融合蛋白中的靶向部分(例如抗體)綴合。已經用於細胞毒素綴合的接頭類型的實例包括但不限於腙、硫醚、酯、二硫化物和含肽的接頭。可以選擇,例如,在溶酶體區室內易被低pH切割或易被蛋白酶切割的接頭,該蛋白酶例如是在腫瘤組織中優先表達的蛋白酶,如組織蛋白酶(例如組織蛋白酶B、C、D)。Cytotoxins can be conjugated to the fusion proteins of the invention using linker technology used in the art, eg, to a targeting moiety (eg, an antibody) in the fusion protein. Examples of the types of linkers that have been used for cytotoxin conjugation include, but are not limited to, hydrazone, thioether, ester, disulfide, and peptide-containing linkers. Linkers can be selected, for example, within the lysosomal compartment that are cleaved by low pH or by proteases, such as proteases preferentially expressed in tumor tissue, such as cathepsins (e.g., cathepsins B, C, D) .
本發明的融合蛋白也可以與放射性同位素綴合,產生細胞毒性放射性藥物,又稱為放射性綴合物。能夠與本發明的融合蛋白綴合的放射性同位素的例子包括但不限於碘131、銦111、釔90和鑥177。製備放射性綴合物的方法在本領域是公知的。The fusion proteins of the present invention can also be conjugated with radioisotopes to produce cytotoxic radiopharmaceuticals, also known as radioconjugates. Examples of radioisotopes that can be conjugated to fusion proteins of the present invention include, but are not limited to, iodine 131, indium 111, yttrium 90, and yttrium 177. Methods for preparing radioconjugates are well known in the art.
本發明的融合蛋白也可以與具有需要的生物活性的蛋白綴合。這樣的生物活性蛋白包括,例如:具有酶活性的毒素或其活性片段,如相思豆毒蛋白、蓖麻毒蛋白A、假單胞菌外毒素或白喉毒素;蛋白,如腫瘤壞死因數或干擾素-γ;或生物學反應調節物,如免疫調節因數,例如淋巴因數、白介素(例如IL-1、IL-2、IL-6、IL-10)、趨化因數(例如ccl3、ccl26、cxcl7)、粒細胞巨噬細胞集落刺激因數(「GM-CSF」)、粒細胞集落刺激因數(「G-CSF」)或其他免疫調節因數如IFN等。The fusion proteins of the present invention can also be conjugated to proteins having the desired biological activity. Such biologically active proteins include, for example: toxins with enzymatic activity or active fragments thereof, such as abrin, ricin A, Pseudomonas exotoxin or diphtheria toxin; proteins such as tumor necrosis factor or interferon - gamma; or biological response modifiers such as immunomodulatory factors such as lymphokines, interleukins (eg IL-1, IL-2, IL-6, IL-10), chemokines (eg ccl3, ccl26, cxcl7) , granulocyte macrophage colony stimulating factor ("GM-CSF"), granulocyte colony stimulating factor ("G-CSF") or other immunomodulatory factors such as IFN.
聯合治療combination therapy
本發明的融合蛋白或藥物組合物可以與化療劑或靶向其他腫瘤抗原的抗體聯合施用。本發明的融合蛋白和所述化療劑或靶向其他腫瘤抗原的抗體可以全部在一次施用或分開施用。當分開施用時(採用互相不同的施用方案的情況下),它們可以連續施用而不中斷或以預定的間隔施用。本發明的融合蛋白或本發明的藥物組合物還可以與放療聯合,例如包括向患者施用電離輻射,其早於、在其過程中和/或晚於本發明的融合蛋白或藥物組合物的施用過程。The fusion proteins or pharmaceutical compositions of the present invention can be administered in combination with chemotherapeutic agents or antibodies targeting other tumor antigens. The fusion protein of the present invention and the chemotherapeutic agent or antibody targeting other tumor antigens may be administered all at one time or separately. When administered separately (in the case of mutually different administration regimens), they may be administered continuously without interruption or at predetermined intervals. The fusion proteins of the present invention or the pharmaceutical compositions of the present invention may also be combined with radiotherapy, eg, comprising administering ionizing radiation to the patient prior to, during, and/or after the administration of the fusion proteins or pharmaceutical compositions of the present invention process.
試劑盒Reagent test kit
本發明的範圍內還包括試劑盒,其包括本發明的突變體、融合多肽、靶向分子、融合蛋白或者編碼其的核酸分子或載體或其組合,以及使用說明。試劑盒一般包括表明試劑盒內容物的預期用途和/或使用方法的標籤。術語標籤包括在試劑盒上或與試劑盒一起提供的或以其他方式隨試劑盒提供的任何書面的或記錄的材料。Also included within the scope of the invention are kits comprising the mutants, fusion polypeptides, targeting molecules, fusion proteins, or nucleic acid molecules or vectors encoding the same of the invention, or combinations thereof, and instructions for use. Kits generally include a label indicating the intended use and/or method of use of the contents of the kit. The term label includes any written or recorded material provided on or with the kit or otherwise provided with the kit.
有益效果beneficial effect
包含野生型TGFBR2-ECD的雙功能分子易發生斷裂,不利於後續的成藥性開發。而包含截短型TGFBR2-ECD的雙功能分子由於缺乏N末端的原始序列,在體內環境中可能會形成與野生型蛋白差異較大的結構,存在一些未知風險。Bifunctional molecules containing wild-type TGFBR2-ECD are prone to breakage, which is not conducive to subsequent druggability development. However, the bifunctional molecule containing truncated TGFBR2-ECD may form a structure that is quite different from the wild-type protein in the in vivo environment due to the lack of the original sequence of the N-terminus, and there are some unknown risks.
發明人針對野生型TGFBR2-ECD的易斷裂特性,採用了與現有技術(如WO2018/205985)完全不同的突變型優化策略,在解決成藥性風險的基礎上盡可能的保留TGFBR2-ECD的原始序列。Aiming at the fragile nature of wild-type TGFBR2-ECD, the inventor adopted a mutant optimization strategy that is completely different from the existing technology (such as WO2018/205985), and kept the original sequence of TGFBR2-ECD as much as possible on the basis of solving the risk of druggability .
與野生型TGFBR2-ECD相比,本發明的TGFBR2-ECD突變體包含在易斷裂區域(QKS、NNDMI和DNNG)的氨基酸突變和/或親水性的改進,但不影響對TGF-β1的親和活性。更進一步地,本發明的TGFBR2-ECD突變體(特別是SEQ ID NO: 2-8),相比於野生型TGFBR2-ECD,在三個區域(見實施例1)和/或三個區域的上下游區域包含親水性氨基酸(例如G、T、S、N、E和Y)和/或親水且可發生潛在O/N糖基化修飾氨基酸取代。具體地,本發明的突變體在所述區域包含T/S和N-X-S/T(X可以是脯氨酸(P)以外的任何氨基酸),以親水性增強和潛在糖基化修飾保護為策略,可以提高融合蛋白的穩定性。Compared to wild-type TGFBR2-ECD, the TGFBR2-ECD mutants of the present invention contain amino acid mutations in the breakable regions (QKS, NNDMI and DNNG) and/or improvements in hydrophilicity, but do not affect the affinity activity for TGF-β1 . Furthermore, the TGFBR2-ECD mutants of the present invention (particularly SEQ ID NOs: 2-8), compared to wild-type TGFBR2-ECD, have three regions (see Example 1) and/or three regions The upstream and downstream regions comprise hydrophilic amino acids (eg, G, T, S, N, E, and Y) and/or hydrophilic and potentially O/N glycosylation-modified amino acid substitutions. Specifically, the mutants of the present invention comprise T/S and N-X-S/T in the region (X can be any amino acid other than proline (P)), with hydrophilic enhancement and potential glycosylation modification protection as strategies, The stability of the fusion protein can be improved.
與包含野生型TGFBR2-ECD的融合蛋白相比,本發明的融合蛋白包含改進的TGFBR2-ECD突變體,使得本發明的融合蛋白在生產過程中不易發生斷裂和降解,表現出更高的穩定性。與包含截短型TGFBR2-ECD的融合蛋白相比,本發明的融合蛋白中的TGFBR2-ECD突變體與野生型TGFBR2-ECD更接近,可能有助於減少在體內環境中的潛在風險。更進一步的,本發明的融合蛋白(例如突變型抗PD-L1/TGF-β Trap)對TGF-β1和PD-L1有較高的親和活性。因此本發明的TGFBR2-ECD突變體和包含其的融合蛋白,是其作為TGF-β Trap成藥性開發的有益補充。Compared with the fusion protein comprising wild-type TGFBR2-ECD, the fusion protein of the present invention comprises an improved TGFBR2-ECD mutant, so that the fusion protein of the present invention is less prone to breakage and degradation during production, and exhibits higher stability . TGFBR2-ECD mutants in fusion proteins of the invention are closer to wild-type TGFBR2-ECD than fusion proteins comprising truncated TGFBR2-ECD, possibly helping to reduce potential risk in an in vivo setting. Furthermore, the fusion protein of the present invention (eg mutant anti-PD-L1/TGF-β Trap) has higher affinity activity for TGF-β1 and PD-L1. Therefore, the TGFBR2-ECD mutant of the present invention and the fusion protein comprising the same are useful supplements for the druggability development of TGF-β Trap.
實施例Example
通過參考在此給出的一些具體實施例可獲得對本發明的進一步的理解,這些實施例僅用於說明本發明,其無意於對本發明的範圍做出任何限制。顯然,可以對本發明作出多種改動和變化而不脫離本發明的實質,因此,這些改動和變化同樣在本申請要求保護的範圍內。A further understanding of the present invention may be obtained by reference to some specific examples given herein, which are intended to illustrate the present invention only and are not intended to limit the scope of the present invention in any way. Obviously, various modifications and changes can be made to the present invention without departing from the essence of the present invention, therefore, these modifications and changes are also within the scope of protection claimed in this application.
除非另外指明,實施例部分中所用的試劑和儀器都是可商購的。Unless otherwise indicated, the reagents and apparatus used in the Examples section are commercially available.
實施例1 抗PD-L1/TGF-β Trap的構建與表達Example 1 Construction and expression of anti-PD-L1/TGF-β Trap
經質譜檢測發現,野生型抗PD-L1/TGFBR2-ECD的斷裂點主要位於TGFBR2-ECD的N端(結構示意如圖1A所示),其序列為「IPPHV QKS V NNDMI VT DNNG AVKFPQL」。經質譜驗證,野生型TGFBR2-ECD的降解位點主要位於三個區域,即第一區域Q-K-S和第二區域N-NDM-I(其中「-」表示斷裂點),以及第三區域「DNNG」。 Mass spectrometry showed that the breakpoint of wild-type anti-PD-L1/TGFBR2-ECD was mainly located at the N-terminus of TGFBR2-ECD (schematic structure is shown in Figure 1A), and its sequence was "IPPHV QKS V NNDMI VT DNNG AVKFPQL". It was verified by mass spectrometry that the degradation sites of wild-type TGFBR2-ECD were mainly located in three regions, namely the first region QKS and the second region N-NDM-I (where "-" represents the breakpoint), and the third region "DNNG" .
由圖1A可知,斷裂產生的主要降解產物中抗體端結構完整,以常規Protein A介質無法有效去除降解產物,對下游純化工藝的開發帶來巨大挑戰,嚴重影響分子成藥性開發。發明人發現,當主要針對第一區域進行突變時(例如Mu1和Mu3),主降解點會轉移至第二區域;而只針對第一和第二區域進行改造時(例如Mu2和Mu4),第三區域的序列「DNNG」會成為新的降解位點。因此,針對三個區域或三個區域及其上下游序列同時進行針對性的有效突變優化是獲得高品質融合蛋白的必然選擇。It can be seen from Figure 1A that the main degradation products produced by the fragmentation have a complete structure at the end of the antibody, and the degradation products cannot be effectively removed by conventional Protein A media, which brings great challenges to the development of downstream purification processes and seriously affects the development of molecular druggability. The inventors found that when the first region is mainly mutated (such as Mu1 and Mu3), the main degradation point will be transferred to the second region; and when only the first and second regions are modified (such as Mu2 and Mu4), the first The sequence "DNNG" of the three regions will become a new degradation site. Therefore, targeted and effective mutation optimization for three regions or three regions and their upstream and downstream sequences at the same time is an inevitable choice to obtain high-quality fusion proteins.
本實施例中,採用抗PD-L1抗體作為靶向部分,TGFBR2-ECD野生型或突變體作為TGF-β Trap,構建了幾種包含TGF-β Trap和抗PD-L1抗體的雙功能分子(抗PD-L1/TGF-β Trap)。實施例中所用的抗PD-L1抗體為WO 2019/233462中描述的B11抗體,其相關內容整體援引加入本文。抗PD-L1抗體B11包含兩個重鏈和兩個輕鏈,兩個重鏈各自包含SEQ ID NO: 43的氨基酸序列,兩個輕鏈各自包含SEQ ID NO: 42的氨基酸序列。抗PD-L1/TGF-β Trap包含兩個融合多肽和兩個輕鏈,其中抗體B11的每個抗體重鏈(SEQ ID NO: 43)的C末端都與一個TGFBR2-ECD (野生型或突變體)的N末端通過接頭(G 4S) 4G連接形成融合多肽,抗PD-L1/TGF-β Trap的輕鏈為抗體B11的輕鏈(SEQ ID NO: 42)。 In this example, using anti-PD-L1 antibody as targeting moiety and TGFBR2-ECD wild type or mutant as TGF-β Trap, several bifunctional molecules containing TGF-β Trap and anti-PD-L1 antibody were constructed ( Anti-PD-L1/TGF-β Trap). The anti-PD-L1 antibody used in the examples is the B11 antibody described in WO 2019/233462, the relevant contents of which are incorporated herein by reference in their entirety. Anti-PD-L1 antibody B11 comprises two heavy chains each comprising the amino acid sequence of SEQ ID NO:43 and two light chains each comprising the amino acid sequence of SEQ ID NO:42. The anti-PD-L1/TGF-β Trap contains two fusion polypeptides and two light chains, wherein the C-terminus of each antibody heavy chain (SEQ ID NO: 43) of antibody B11 is bound to a TGFBR2-ECD (wild-type or mutated). The N-terminus of anti-PD-L1/TGF-β Trap is connected by a linker (G 4 S) 4 G to form a fusion polypeptide, and the light chain of anti-PD-L1/TGF-β Trap is the light chain of antibody B11 (SEQ ID NO: 42).
包含TGFBR2-ECD突變體的融合蛋白Mu1-11,又稱為突變型抗PD-L1/TGF-β Trap。Mu1-4包含的TGFBR2-ECD突變體分別具有SEQ ID NO: 44-47的氨基酸序列,融合多肽分別具有SEQ ID NO: 48-51的氨基酸序列。Mu5-11包含的TGFBR2-ECD突變體分別具有SEQ ID NO: 2-8的氨基酸序列,TGFBR2-ECD突變體與抗體B11重鏈的融合多肽分別具有SEQ ID NO: 9-15的氨基酸序列。與Mu5-11相比,Mu1-4僅在三個區域中的第一和/或第二區域中包含氨基酸突變(參見表1)。Fusion protein Mu1-11 containing mutant TGFBR2-ECD, also known as mutant anti-PD-L1/TGF-β Trap. The TGFBR2-ECD mutants contained in Mu1-4 have the amino acid sequences of SEQ ID NOs: 44-47, respectively, and the fusion polypeptides have the amino acid sequences of SEQ ID NOs: 48-51, respectively. The TGFBR2-ECD mutants contained in Mu5-11 have the amino acid sequences of SEQ ID NOs: 2-8, respectively, and the fusion polypeptides of the TGFBR2-ECD mutants and the heavy chain of antibody B11 have the amino acid sequences of SEQ ID NOs: 9-15, respectively. Compared to Mu5-11, Mu1-4 contains amino acid mutations only in the first and/or second of the three regions (see Table 1).
還構建了包含TGFBR2-ECD野生型(SEQ ID NO: 1)的野生型融合蛋白(WT)作為參比,又稱為野生型抗PD-L1/TGF-β Trap(參見表1)。A wild-type fusion protein (WT) comprising TGFBR2-ECD wild-type (SEQ ID NO: 1) was also constructed as a reference, also referred to as a wild-type anti-PD-L1/TGF-beta Trap (see Table 1).
由表2的結果可知,在所述三個區域或者所述三個區域及其上下游區域的同時突變改造是提高融合蛋白穩定性的關鍵。Mu5-9均是只針對三個區域的突變:Mu5在每個區域中均只包含一個親水且可發生潛在O-糖基化修飾的氨基酸「S」;Mu6在每一區域中均包含兩個親水且可發生潛在O-糖基化修飾的氨基酸「S/T」;Mu7在Mu5的基礎上,在第一區域中還包含一個親水且可發生潛在N-糖基化修飾的氨基酸「N」,並形成潛在N-糖基化位點「N-A-S」;Mu8在Mu7的基礎上,在第二區域中還包含一個親水且可發生潛在N-糖基化修飾的氨基酸「N」,並形成潛在N-糖基化位點「N-A-S」;Mu9在Mu8的基礎上,在第三區域中還包含一個親水且可發生潛在N-糖基化修飾的氨基酸「N」,並形成潛在N-糖基化位點「N-A-S」。Mu10和Mu11在三個區域及其上下游區域引入廣泛的親水性氨基酸,特別是可發生潛在O-糖修飾的氨基酸「S/T」。
表1 抗PD-L1/TGF-β Trap
還構建了融合蛋白Fc-TGFBR2-ECD (SEQ ID NO: 52),其中TGFBR2-ECD突變體(SEQ ID NO: 2)的N末端與人IgG1的Fc片段(SEQ ID NO: 53)的C末端通過接頭(G 4S) 4G連接。 A fusion protein Fc-TGFBR2-ECD (SEQ ID NO: 52) was also constructed, in which the N-terminus of the TGFBR2-ECD mutant (SEQ ID NO: 2) was linked to the C-terminus of the Fc fragment of human IgG1 (SEQ ID NO: 53) Connection via connector (G 4 S) 4 G.
將表達野生型及突變型抗PD-L1/TGF-β Trap或者融合蛋白Fc-TGFBR2-ECD的質粒瞬間轉染到Expi-CHO細胞(Thermo Fisher)中。經過14天左右的無血清細胞培養,收穫培養上清。檢測培養上清中的抗體表達量,培養上清用Protein A介質進行純化,獲得目標融合蛋白並進行後續檢測。Plasmids expressing wild-type and mutant anti-PD-L1/TGF-β Trap or fusion protein Fc-TGFBR2-ECD were transiently transfected into Expi-CHO cells (Thermo Fisher). After about 14 days of serum-free cell culture, the culture supernatant was harvested. The antibody expression in the culture supernatant was detected, and the culture supernatant was purified with Protein A medium to obtain the target fusion protein for subsequent detection.
實施例2 抗PD-L1/TGF-β Trap的穩定性檢測Example 2 Stability detection of anti-PD-L1/TGF-β Trap
如實施例1所述的野生型和突變型抗PD-L1/TGF-β Trap經Protein A介質一步純化後,通過還原蛋白電泳、SEC-HPLC和CE-SDS進行降解物含量檢測。The wild-type and mutant anti-PD-L1/TGF-β Trap as described in Example 1 were purified by Protein A medium in one step, and then the content of degradants was detected by reduced protein electrophoresis, SEC-HPLC and CE-SDS.
還原蛋白電泳:取樣品加入適量Loading buffer,其中一份樣品加入DTT進行還原,還原樣品70℃水浴加熱10 min後,上樣2 μg,經10%蛋白膠電泳分離。實驗結果如圖1B所示,泳道1為抗PD-L1抗體,泳道2為野生型抗PD-L1/TGF-β Trap,泳道3為Mu5。由結果可知,野生型抗PD-L1/TGF-β Trap在53 kDa附近存在顯著融合蛋白-HC降解後產物(TGFBR2-ECD缺失),而Mu5分子的降解得到有效控制。Reduced protein electrophoresis: Take the sample and add an appropriate amount of Loading buffer, and add DTT to one of the samples for reduction. After the reduced sample is heated in a water bath at 70°C for 10 min, 2 μg of the sample is loaded and separated by 10% protein gel electrophoresis. The experimental results are shown in Figure 1B,
SEC-HPLC:以100 mM PB 200 mM Arg (pH 6.8)為流動相,1 mL/min流速,採用Waters BEH SEC 200A 7.8x300 mm 3.5 μm色譜柱進行分析,每個樣品進樣50 μg。SEC-HPLC: 100
CE-SDS:取兩份樣品加入適量樣品緩衝液,其中一份加入β-ME(β-巰基乙醇)進行還原,非還原樣品70℃水浴5 min,還原樣品70℃水浴10 min。使用Maurice進行CE-SDS分析,非還原樣品(nrCE-SDS)分離40 min,還原樣品(rCE-SDS)分離35 min。CE-SDS: Take two samples and add an appropriate amount of sample buffer, one of which is added with β-ME (β-mercaptoethanol) for reduction, the non-reduced samples are water bathed at 70°C for 5 minutes, and the reduced samples are water bathed at 70°C for 10 minutes. CE-SDS analysis was performed using Maurice, with non-reducing samples (nrCE-SDS) separated for 40 min and reduced samples (rCE-SDS) separated for 35 min.
通過SEC-HPLC分析野生型抗PD-L1/TGF-β Trap (WT)和Mu5的穩定性的圖譜示於圖2:WT中單體的比例為85.2%,降解物的比例為14%,而Mu5中單體比例為97%。The profiles of the stability of wild-type anti-PD-L1/TGF-β Trap (WT) and Mu5 analyzed by SEC-HPLC are shown in Figure 2: the proportion of monomers in WT was 85.2%, the proportion of degradants was 14%, and The monomer ratio in Mu5 is 97%.
通過nrCE-SDS分析野生型抗PD-L1/TGF-β Trap (WT)和Mu5穩定性的電泳圖譜示於圖3:WT中完整蛋白的比例為86.4%,蛋白片段的比例高達13.6%,而Mu5中完整蛋白比例高達94.7%,蛋白片段比例低至5.3%。Electropherograms of wild-type anti-PD-L1/TGF-β Trap (WT) and Mu5 stability analyzed by nrCE-SDS are shown in Figure 3: the proportion of intact protein in WT was 86.4%, the proportion of protein fragments was as high as 13.6%, while The proportion of intact protein in Mu5 is as high as 94.7%, and the proportion of protein fragments is as low as 5.3%.
通過rCE-SDS分析野生型抗PD-L1/TGF-β Trap (WT)和Mu5穩定性的電泳圖譜示於圖4:WT中蛋白片段的比例高達8.3%,而Mu5中的蛋白片段比例低至1.8%。Electropherograms of wild-type anti-PD-L1/TGF-β Trap (WT) and Mu5 stability analyzed by rCE-SDS are shown in Figure 4: The proportion of protein fragments in WT was as high as 8.3%, while the proportion of protein fragments in Mu5 was as low as 1.8%.
野生型(WT)和突變型抗PD-L1/TGF-β Trap (Mu1-11)的SEC-HPLC和CE-SDS資料匯總如表2所示。Table 2 summarizes the SEC-HPLC and CE-SDS data of wild-type (WT) and mutant anti-PD-L1/TGF-β Trap (Mu1-11).
表2的SEC-HPLC結果顯示,野生型抗PD-L1/TGF-β Trap中單體(Mono)比例為85.2%,降解物(LMW)的比例高達14%,本發明的突變型抗PD-L1/TGF-β Trap (Mu5-11)中單體比例可以達到95%以上,降解物比例可以低至3.5%以下,表明本發明的突變型抗PD-L1/TGF-β Trap的穩定性更高。The SEC-HPLC results in Table 2 show that the proportion of monomer (Mono) in the wild-type anti-PD-L1/TGF-β Trap is 85.2%, and the proportion of degradant (LMW) is as high as 14%. The proportion of monomers in L1/TGF-β Trap (Mu5-11) can reach more than 95%, and the proportion of degradants can be as low as 3.5%, indicating that the mutant anti-PD-L1/TGF-β Trap of the present invention is more stable. high.
表2的nrCE-SDS結果顯示,野生型抗PD-L1/TGF-β Trap中完整蛋白(Intact)比例為86.4%,蛋白片段(Fragment)的比例高達13.6%,本發明的突變型抗PD-L1/TGF-β Trap (Mu5-11)中完整蛋白比例高達94.7%或更高,蛋白片段比例低至5%左右。The nrCE-SDS results in Table 2 show that the proportion of intact protein (Intact) in the wild-type anti-PD-L1/TGF-β Trap is 86.4%, and the proportion of protein fragments (Fragment) is as high as 13.6%. The proportion of intact protein in L1/TGF-β Trap (Mu5-11) was as high as 94.7% or more, and the proportion of protein fragments was as low as about 5%.
表2的rCE-SDS結果顯示,野生型抗PD-L1/TGF-β Trap的蛋白片段比例高達8.3%,本發明的突變型抗PD-L1/TGF-β Trap(Mu5-11)的蛋白片段比例低至2%以下。這些結果表明本發明的突變型抗PD-L1/TGF-β Trap的穩定性更高。The rCE-SDS results in Table 2 show that the proportion of protein fragments of wild-type anti-PD-L1/TGF-β Trap is as high as 8.3%, and the protein fragments of mutant anti-PD-L1/TGF-β Trap (Mu5-11) of the present invention are as high as 8.3%. The proportion is as low as 2% or less. These results indicate that the mutant anti-PD-L1/TGF-β Trap of the present invention is more stable.
由該表可知,針對野生型抗PD-L1/TGF-β Trap的易斷裂區域(第一區域QKS (第6-8位氨基酸)、第二區域NNDMI (第10-14位氨基酸)以及第三區域DNNG (第17-20位氨基酸))的隨意突變不一定會有顯著的品質提升效應。由Mu5-11與野生型抗PD-L1/TGF-β Trap比較可知,用親水性氨基酸和/或N-X-S/T基序取代這三個區域中的氨基酸可以提高抗PD-L1/TGF-β Trap的穩定性。在針對三個區域同時進行有效突變的Mu5及在此基礎上繼續引入親水且可發生N-糖基化修飾的N-X-S/T基序的Mu6-8具有較好的品質提升。另外,Mu10/11針對易斷裂區域及其附近的氨基酸殘基引入廣泛的親水性氨基酸,特別是廣泛引入可發生潛在O-糖基化修飾的氨基酸T/S也同樣顯著促進了抗PD-L1/TGF-β Trap的穩定性。As can be seen from this table, the fragmentation-fragile regions (first region QKS (6-8 amino acids), second region NNDMI (10-14 amino acids) and third region of wild-type anti-PD-L1/TGF-β Trap Random mutations in the region DNNG (amino acids 17-20) do not necessarily have a significant quality improvement effect. Substitution of amino acids in these three regions with hydrophilic amino acids and/or N-X-S/T motifs can improve the anti-PD-L1/TGF-β Trap by comparing Mu5-11 with wild-type anti-PD-L1/TGF-β Trap. stability. Mu5, which was effectively mutated for the three regions at the same time, and Mu6-8, which continued to introduce hydrophilic and N-glycosylation-modified N-X-S/T motifs on this basis, had better quality improvement. In addition, Mu10/11 introduced a wide range of hydrophilic amino acids for the cleavable region and its nearby amino acid residues, especially the extensive introduction of amino acid T/S, which can undergo potential O-glycosylation modification, also significantly promoted anti-PD-L1. / TGF-β Trap stability.
除此之外,與在三個區域均包含氨基酸突變的Mu5-11相比,Mu1-4僅在三個區域中的一個或兩個區域中包含氨基酸突變,這樣的氨基酸突變對抗PD-L1/TGF-β Trap的穩定性改善不顯著甚至可能會加重蛋白降解。由此可見,要提高抗PD-L1/TGF-β Trap的穩定性,氨基酸突變的區域也有一定的選擇性。 表2 野生型和突變型抗PD-L1/TGF-β Trap品質檢測 In addition, compared with Mu5-11, which contains amino acid mutations in all three regions, Mu1-4 contains amino acid mutations in only one or two of the three regions, and such amino acid mutations are resistant to PD-L1/ The stability improvement of TGF-β Trap is not significant and may even aggravate protein degradation. It can be seen that to improve the stability of anti-PD-L1/TGF-β Trap, the amino acid mutation region also has a certain selectivity. Table 2 Quality detection of wild-type and mutant anti-PD-L1/TGF-β Trap
實施例3 抗PD-L1/TGF-β Trap的特異性識別活性分析Example 3 Analysis of specific recognition activity of anti-PD-L1/TGF-β Trap
在本實施例中,用ELISA測定抗PD-L1/TGF-β Trap與靶點蛋白人PD-L1(hPD-L1)和人TGF-β1(hTGF-β1)的結合。In this example, the binding of anti-PD-L1/TGF-β Trap to target proteins human PD-L1 (hPD-L1) and human TGF-β1 (hTGF-β1) was determined by ELISA.
分別將人源PD-L1 (R&D公司)或TGF-β1 (Acro公司)用PBS稀釋到1μg/ml並包被96孔板。在4℃下孵育過夜後,次日棄去包被液,並用PBST洗滌。然後每孔加入200 μl BSA封閉液,在室溫下孵育1 h。用PBST洗滌三遍,將野生型抗PD-L1/TGF-β Trap、本發明的抗PD-L1/TGF-β Trap以及PD-L1抗體用1% BSA PBST稀釋,最高濃度為14 nM,進行4倍梯度稀釋,做8個濃度梯度,以每孔100 μl的量作為一抗分別加入96孔板,在室溫下孵育2 h。用PBST洗滌三遍,然後加入抗人IgG-Fab-HRP(二抗,Abcam),在室溫下孵育1 h。最後每孔用PBST洗滌四次,加入TMB顯色液(北京天根生化科技有限公司),室溫顯色。終止顯色後用酶標儀450 nm測定OD值。實驗結果如圖5所示,野生型(WT)和突變型抗PD-L1/TGF-β Trap (Mu5-11)與PD-L1結合的EC50在0.1-0.2 nM之間(圖5A),與TGF-β1結合的EC50在0.1-0.2 nM之間(圖5B),表明WT和Mu5-11對兩個靶點蛋白PD-L1和TGF-β1的體外結合能力相近。Human PD-L1 (R&D Company) or TGF-β1 (Acro Company) were diluted with PBS to 1 μg/ml and coated on 96-well plates, respectively. After overnight incubation at 4°C, the coating solution was discarded the next day and washed with PBST. Then, 200 μl of BSA blocking solution was added to each well and incubated for 1 h at room temperature. Washed three times with PBST, wild-type anti-PD-L1/TGF-β Trap, anti-PD-L1/TGF-β Trap and PD-L1 antibodies of the present invention were diluted with 1% BSA PBST to a maximum concentration of 14 nM for 4-fold gradient dilution, 8 concentration gradients were made, and 100 μl per well was added to the 96-well plate as the primary antibody, and incubated at room temperature for 2 h. After washing three times with PBST, anti-human IgG-Fab-HRP (secondary antibody, Abcam) was added and incubated for 1 h at room temperature. Finally, each well was washed four times with PBST, and TMB color developing solution (Beijing Tiangen Biochemical Technology Co., Ltd.) was added to develop color at room temperature. After the color development was terminated, the OD value was measured with a microplate reader at 450 nm. The experimental results are shown in Figure 5. The EC50 of wild-type (WT) and mutant anti-PD-L1/TGF-β Trap (Mu5-11) binding to PD-L1 was between 0.1-0.2 nM (Figure 5A), and the The EC50 of TGF-β1 binding was between 0.1-0.2 nM (Fig. 5B), indicating that WT and Mu5-11 had similar in vitro binding abilities to the two target proteins PD-L1 and TGF-β1.
實施例4 抗PD-L1/TGF-β Trap的親和力分析Example 4 Affinity analysis of anti-PD-L1/TGF-β Trap
在本實施例中,用Octet RED96檢測系統測定融合蛋白對靶點蛋白TGF-β1的親和力。In this example, the Octet RED96 detection system was used to determine the affinity of the fusion protein to the target protein TGF-β1.
偶聯配體:本方法採用FAB2G (Anti-Human Fab-CH1 2nd Generation)晶片,提前用SD緩衝液浸泡晶片10-15 min,以50 µg/ml濃度Loading配體(野生型或突變型抗PD-L1/TGF-β Trap),預設時長1500 s,配體Loading預設值2.5 nm,用運行緩衝液 (SD 緩衝液)浸潤晶片至基線平穩,去除游離配體。Coupling ligand: This method adopts FAB2G (Anti-Human Fab-CH1 2nd Generation) wafer, soak the wafer in SD buffer for 10-15 min in advance, and load the ligand (wild-type or mutant anti-PD) at a concentration of 50 µg/ml -L1/TGF-β Trap), the preset duration is 1500 s, the preset value of ligand loading is 2.5 nm, and the wafer is infiltrated with running buffer (SD buffer) until the baseline is stable, and free ligands are removed.
動力學實驗:將TGF-β1用SD緩衝液分別稀釋至44.4 nM、22.2 nM、11.1 nM、5.55 nM、2.775 nM和1.39 nM。以TGF-β1為分析物,野生型和突變型抗PD-L1/TGF-β Trap為配體,進行親和力檢測實驗。配體與分析物結合時間(Association) 240 s,分析物解離時間(Dissociation) 300 s,以SD緩衝液作為空白對照進行背景扣除。Kinetic experiments: TGF-β1 was diluted with SD buffer to 44.4 nM, 22.2 nM, 11.1 nM, 5.55 nM, 2.775 nM and 1.39 nM, respectively. Using TGF-β1 as the analyte and wild-type and mutant anti-PD-L1/TGF-β Trap as the ligand, the affinity detection experiment was performed. The ligand-analyte binding time (Association) was 240 s, the analyte dissociation time (Dissociation) was 300 s, and SD buffer was used as a blank control for background subtraction.
以FortéBio Data Analysis 9.0採用靜態擬合模型進行分析,結果如圖6所示,野生型抗PD-L1/TGF-β Trap (WT)與TGF-β1之間的K D為7.5×10 -9M,Mu5與TGF-β1之間的K D為3.6×10 -9M,表明WT和Mu5對TGF-β1的結合親和力相近。 Forté Bio Data Analysis 9.0 was used for analysis using a static fitting model. The results are shown in Figure 6. The KD between wild-type anti- PD -L1/TGF-β Trap (WT) and TGF-β1 was 7.5×10 -9 M , the K D between Mu5 and TGF-β1 was 3.6×10 -9 M, indicating that WT and Mu5 had similar binding affinities to TGF-β1.
實施例5 抗PD-L1/TGF-β Trap對EMT途徑基因的表達調控Example 5 Expression regulation of EMT pathway genes by anti-PD-L1/TGF-β Trap
在6孔板中接種A549人非小細胞肺癌細胞(中國科學院細胞庫,SCSP-503),培養24-36 h至60-70%融合度時,對照組加入含2 ng/ml TGF-β1的F-12K完全培養基,實驗組在含有TGF-β1的完全培養基中再分別加入5 μg/ml野生型抗PD-L1/TGF-β Trap或Mu5。A549 human non-small cell lung cancer cells (Cell Bank of Chinese Academy of Sciences, SCSP-503) were inoculated in 6-well plates and cultured for 24-36 h to 60-70% confluency, the control group was added with 2 ng/ml TGF-β1 F-12K complete medium, the experimental group was added 5 μg/ml wild-type anti-PD-L1/TGF-β Trap or Mu5 to the complete medium containing TGF-β1, respectively.
共同培養48 h後,回收細胞,提取細胞總RNA,並進行逆轉錄反應獲得cDNA。配製即時螢光PCR反應體系,檢測抗PD-L1/TGF-β Trap是否參與抑制TGF-β誘導的下游EMT (上皮-間充質轉化)途徑關鍵基因。相關途徑關鍵基因主要有:CDH2、MMP-2、MMP-3、MMP-9、TWIST2和Vimentin等。結果如圖7所示,野生型抗PD-L1/TGF-β Trap (WT)及本發明的抗PD-L1/TGF-β Trap (Mu5)均可有效抑制TGF-β1誘導的EMT途徑基因表達。After co-cultivation for 48 h, the cells were recovered, and total cellular RNA was extracted, and cDNA was obtained by reverse transcription reaction. A real-time fluorescent PCR reaction system was prepared to detect whether anti-PD-L1/TGF-β Trap was involved in inhibiting the key genes of the downstream EMT (epithelial-mesenchymal transition) pathway induced by TGF-β. The key genes of related pathways mainly include CDH2, MMP-2, MMP-3, MMP-9, TWIST2 and Vimentin. The results are shown in FIG. 7 , both the wild-type anti-PD-L1/TGF-β Trap (WT) and the anti-PD-L1/TGF-β Trap (Mu5) of the present invention can effectively inhibit TGF-β1-induced EMT pathway gene expression .
實施例6 Mu5對MC38/hPD-L1小鼠結腸癌細胞皮下移植瘤的藥效驗證Example 6 Validation of the efficacy of Mu5 on subcutaneous transplanted tumor of colon cancer cells in MC38/hPD-L1 mice
本實施例以Mu5為本發明的抗PD-L1/TGF-β Trap融合蛋白的代表藥物開展移植瘤藥效驗證。將1×10
6個結腸癌MC38/hPD-L1 (人PD-L1穩轉MC38細胞株;動物實驗中心構建)細胞注射入小鼠腋下。待腫瘤生長至平均體積50 mm
3左右,根據腫瘤體積將小鼠隨機分為3組:溶劑對照組(PBS)、Mu5 1.22 mg/kg組和Mu5 3.66 mg/kg組。每組8只,各組按10 ml/kg的給藥容積腹腔注射給予相應濃度的受試物,給藥頻率為每週兩次,每週稱重和測量腫瘤體積2次。初次給藥為第1天(D1)。分別於第1、4、7、11、15和18天(D18)稱量小鼠體重並測量腫瘤體積(Tumor Volume,TV)。在第18天,將小鼠處死,剝離腫瘤並稱取瘤重(Tumor Weight,TW)。根據腫瘤體積和瘤重計算相對腫瘤體積(Relative Tumor Volume,RTV)、相對腫瘤增殖率(T/C)以及瘤重抑制率(Inhibition Ratio,IR)。結果示於表3、表4和圖8。
In this example, Mu5 was used as a representative drug of the anti-PD-L1/TGF-β Trap fusion protein of the present invention to verify the efficacy of transplanted tumors. 1×10 6 colon cancer MC38/hPD-L1 (human PD-L1 stably transfected MC38 cell line; constructed by the Animal Experiment Center) cells were injected into the armpits of mice. After the tumors grew to an average volume of about 50 mm 3 , the mice were randomly divided into 3 groups according to the tumor volume: the solvent control group (PBS), the Mu5 1.22 mg/kg group and the Mu5 3.66 mg/kg group. There were 8 animals in each group. Each group was given the corresponding concentration of the test substance by intraperitoneal injection at a dose of 10 ml/kg. The dosing frequency was twice a week, and the tumor volume was weighed and measured twice a week. The initial dose was Day 1 (D1). Mice were weighed and tumor volume (TV) was measured on
如表3和圖8所示,在第18天,與溶劑對照組(PBS)的RTV值41.96±2.89相比,Mu5 1.22 mg/kg組和Mu5 3.66 mg/kg組的RTV值分別為17.45±2.81和12.27±3.42。
表3 Mu5的腫瘤抑制作用(腫瘤體積)
如表4所示,在第18天,與溶劑對照組(PBS)的瘤重2.4269±0.3936 g相比,Mu5 1.22 mg/kg組和Mu5 3.66 mg/kg組的瘤重分別為1.1161±0.0856 g和0.6751±0.2231 g。Mu5 1.22 mg/kg組和Mu5 3.66 mg/kg組的瘤重抑制率(IR)分別為54.01%和72.18%。
表4 Mu5的腫瘤抑制作用(瘤重)
如表3、表4和圖8所示,與溶劑對照組相比,腫瘤生長在Mu5治療組中均被顯著抑制,並呈現出良好的劑量依賴效應。
序列表
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圖1A:抗PD-L1/TGF-β Trap的結構示意圖以及野生型抗PD-L1/TGF-β Trap發生降解的示意圖。
圖1B:野生型抗PD-L1/TGF-β Trap及突變型抗PD-L1/TGF-β Trap的還原蛋白電泳,用銀染法使蛋白條帶顯色:泳道1為抗PD-L1抗體,泳道2為野生型抗PD-L1/TGF-β Trap,泳道3為Mu5;HC,重鏈;LC,輕鏈;融合蛋白-HC,抗PD-L1的抗體重鏈和TGFBR2-ECD的融合多肽;融合蛋白-LC,抗PD-L1/TGF-β Trap中的抗體輕鏈,與抗PD-L1抗體輕鏈一致;降解產物,融合蛋白-HC由於TGFBR2-ECD的N端斷裂而產生的缺失TGFBR2-ECD產物。
圖2:SEC-HPLC圖譜示出野生型抗PD-L1/TGF-β Trap (WT) (2A)及突變型抗PD-L1/TGF-β Trap (Mu5) (2B)中各組分的比例;Mono,單體;LMW,低分子量降解物。
圖3:非還原型CE-SDS毛細管電泳圖譜示出野生型抗PD-L1/TGF-β Trap (WT) (3A)及突變型抗PD-L1/TGF-β Trap (Mu5) (3B)中各組分的比例:Fragment,非完整結構蛋白;Intact,完整蛋白。
圖4:還原型CE-SDS毛細管電泳圖譜示出野生型抗PD-L1/TGF-β Trap (WT) (4A)及突變型抗PD-L1/TGF-β Trap (Mu5) (4B)中各組分的比例:HC,抗PD-L1/TGF-β Trap中的抗體重鏈和TGFBR2-ECD的融合多肽;LC,抗PD-L1/TGF-β Trap中的抗體輕鏈;Fragment,非完整結構蛋白片段;Intact,完整蛋白。
圖5:野生型抗PD-L1/TGF-β Trap (WT)及突變型抗PD-L1/TGF-β Trap (Mu5-11)對hPD-L1 (5A)和hTGF-β1 (5B)的結合活性的ELISA檢測結果。
圖6:野生型抗PD-L1/TGF-β Trap (WT) (6A)及突變型抗PD-L1/TGF-β Trap (Mu5) (6B)與hTGF-β1相互作用的分子動力學檢測結果。
圖7:在A549細胞株中檢測野生型抗PD-L1/TGF-β Trap及突變型抗PD-L1/TGF-β Trap對EMT途徑基因的表達抑制的結果:在hTGF-β1存在下,分別檢測野生型抗PD-L1/TGF-β Trap及突變型PD-L1/TGF-β Trap對EMT途徑基因的表達抑制,所檢測的基因從左到右依次為:CDH2、MMP2、MMP3、MMP9、TWIST1、VIMENTIN;細胞樣品分別為:(1)TGF-b1 2 ng:培養基中加入終濃度為2 ng/ml 的hTGF-β1,培養48h,作為陰性對照;(2) TGF-b1+WT:TGF-b1 2 ng/ml,同時加入5 μg/ml野生型PD-L1/TGF-β Trap,培養48h;(3) TGF-b1+Mu5:TGF-b1 2 ng/ml,同時加入5 μg/ml Mu5,培養48h。
圖8:在MC38/hPD-L1小鼠結腸癌細胞皮下移植瘤模型中檢測突變型抗PD-L1/TGF-β Trap (Mu5)的體內腫瘤抑制活性;曲線示出隨時間各組小鼠中的相對腫瘤體積。
Figure 1A: Schematic diagram of the structure of anti-PD-L1/TGF-β Trap and the degradation of wild-type anti-PD-L1/TGF-β Trap.
Figure 1B: Reduced protein electrophoresis of wild-type anti-PD-L1/TGF-β Trap and mutant anti-PD-L1/TGF-β Trap, and the protein bands were visualized by silver staining:
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