KR100330359B1 - Novel esterase derived from Pseudomonas aeruginosa, its gene and process for production of optically active carboxylic acids using them - Google Patents
Novel esterase derived from Pseudomonas aeruginosa, its gene and process for production of optically active carboxylic acids using them Download PDFInfo
- Publication number
- KR100330359B1 KR100330359B1 KR1019990047927A KR19990047927A KR100330359B1 KR 100330359 B1 KR100330359 B1 KR 100330359B1 KR 1019990047927 A KR1019990047927 A KR 1019990047927A KR 19990047927 A KR19990047927 A KR 19990047927A KR 100330359 B1 KR100330359 B1 KR 100330359B1
- Authority
- KR
- South Korea
- Prior art keywords
- esterase
- optically active
- gene
- carboxylic acid
- active carboxylic
- Prior art date
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Classifications
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Abstract
본 발명은 토양으로부터 분리한 신규한 슈도모나스 이어루지노사(Pseudomonas aeruginosa)와 이로부터 유래한 신규 에스터라제 및 이를 이용하여 광학활성 카르복실산을 제조하는 방법에 관한 것으로, 보다 상세하게는 상기 균주로부터 분리되며 카르복실산 에스터 라세미체로부터 화학식 1로 표시되는 광학활성 카르복실산을 제조할 수 있는 신규 에스터라제 및 그 유전자, 상기 에스터라제 유전자를 클로닝하여 얻어진 재조합 발현벡터 및 형질전환체와, 이를 이용한 광학활성 카르복실산의 제조방법에 관한 것이다. 본 발명의 에스터라제를 사용하면 생리활성 의약품, 특히 고혈압 치료제인 캡토프릴 및 아날라프릴의 생산에 유용한 광학활성 카르복실산을 고수율의 간단한 방법으로 얻을 수 있다.The present invention relates to a novel Pseudomonas aeruginosa isolated from soil, a novel esterase derived therefrom, and a method for producing an optically active carboxylic acid using the same, more specifically from the above strains. A novel esterase and its gene, which are isolated and can produce an optically active carboxylic acid represented by Formula 1 from carboxylic ester racemates, and recombinant expression vectors and transformants obtained by cloning the esterase genes; And a method for producing an optically active carboxylic acid using the same. Using the esterases of the present invention, optically active carboxylic acids useful in the production of physiologically active pharmaceuticals, in particular captopril and analapril, which are therapeutic agents for hypertension, can be obtained by a simple method of high yield.
(상기 식에서 R1, R2및 n은 명세서 내에서 정의된 바와 같다.)(Wherein R 1 , R 2 and n are as defined in the specification).
Description
본 발명은 카르복실산 에스터 라세미체를 비대칭적으로 가수분해하여 하기 화학식 1의 광학활성 카르복실산 및 그의 거울상 이성질체 에스터를 선택적으로 생산하는 미생물인 슈도모나스 이어루지노사와 이로부터 유래한 신규 에스터라제 및 이를 이용한 광학활성 카르복실산의 제조방법에 관한 것이다.The present invention is Pseudomonas irruzinosa, a microorganism which selectively produces an optically active carboxylic acid of Formula 1 and its enantiomeric ester thereof by asymmetrically hydrolyzing a carboxylic ester racemate and a novel ester derived therefrom. And a method for producing an optically active carboxylic acid using the same.
보다 구체적으로 본 발명은 슈도모나스 이어루지노사 유래의 신규 에스터라제; 상기 에스터라제 유전자; 상기 유전자를 포함하는 재조합 발현벡터; 상기 발현벡터로 형질전환된 형질전환체; 상기 형질전환체를 배양하여 그 배양액으로부터 광학활성 카르복실산을 얻는 방법에 관한 것이다.More specifically, the present invention is a novel esterase derived from Pseudomonas irruginosa; The esterase gene; A recombinant expression vector comprising the gene; Transformants transformed with the expression vector; It relates to a method of culturing the transformant to obtain an optically active carboxylic acid from the culture.
화학식 1Formula 1
상기 식에서, R1은 알킬, 아랄킬 또는 아릴이고, R2는 알킬이며, n은 1 또는 2이다.Wherein R 1 is alkyl, aralkyl or aryl, R 2 is alkyl and n is 1 or 2.
광학활성 카르복실산은 여러 가지 생리활성 의약품, 특히 고혈압 치료제인 캡토프릴(captopril)(Ondettiiet al.,Science 196, 441(1977)) 및 아날라프릴(analapril)(일본 특허공개공보, 소63-18599)의 생산에 유용한 원료물질로 사용된다. 1992년에 FDA가 발표한 광학입체이성체 의약품의 화학, 약리학, 독성학 및 임상학적 양상에 관한 규정[Policy Statement for the Development of New Stereoisomeric Drug]에 따르면 앞으로 신규 키랄 의약품을 개발하여 FDA의 허가를 취득하기 위해서는 광학입체적으로 단일 입체이성체(single enantiomer)이어야 한다고 권고하고 있다. 그러나, 의약품을 라세믹 형태로 생산할 경우에는 라세믹 형태 자체로 사용할 때뿐만 아니라 각각의 이성체를 따로 사용했을 경우에 대해서도 각각 동물과 사람에 대하여 안전하다는 것을 증명하도록 규정하고 있어 라세믹 형태의 의약품 또는 의약품 중간체의 생산을 간접적이지만 거의 원천적으로 규제하는 효과를 나타내고 있다. 이러한 이유는 대개의 경우 광학적 이성질체인 의약품의 생물학적 활성이 한 입체이성체에 의해 나타나며, 다른 하나는 오히려 부작용 또는 독성을 지니기 때문이다. 따라서 광학활성 의약품 생산에 유용한 키랄화합물들의 생산연구는 의약산업의 경쟁력 확보와 국민건강 증진 차원에서 필수 불가결한 연구과제로 대두되고 있다.Optically active carboxylic acids can be used in various bioactive drugs, in particular captopril (Ondettii et al ., Science 196 , 441 (1977)) and analapril (Japanese Patent Publication No. 18599) is used as a useful raw material for the production. According to the FDA's Policy Statement for the Development of New Stereoisomeric Drug in 1992, the FDA issued a new chiral drug to obtain FDA approval. It is recommended that it be a single stereoisomer in an optical three-dimensional form. However, when the pharmaceutical product is produced in racemic form, it is required to prove that it is safe for animals and humans not only when used in the racemic form but also when each isomer is used separately. It has the effect of regulating the production of pharmaceutical intermediates indirectly but almost in principle. This is because, in most cases, the biological activity of a drug, which is an optical isomer, is represented by one stereoisomer, and the other is rather side effect or toxic. Therefore, research on the production of chiral compounds useful for the production of optically active pharmaceuticals has emerged as an indispensable research project in order to secure the competitiveness of the pharmaceutical industry and promote public health.
광학이성질체 중에서 ACE계 저해제(Angiotensin-Converting Enzyme inhibitor)인 에날라프릴, 캡토프릴은 시장규모가 전체의 약 30 %정도로 세계 의약품 시장에서 가장 중요한 위치를 차지하고 있어, 이들의 주요 중간체인 (R)-2-히드록시-4-페닐타노에이트와 (R)-β-아세틸머캅토이소부티레이트의 생물학적 생산기술 개발이 시급한 실정이다.Among the optical isomers, ACE-based inhibitors (Angiotensin-Converting Enzyme inhibitors), enalapril and captopril, occupy the most important position in the global pharmaceutical market with about 30% of the market size, and their major intermediates (R)- Development of biological production technology of 2-hydroxy-4-phenyltanoate and (R) -β-acetylmercaptoisobutyrate is urgent.
광학활성 의약품의 생산원가는 중간체의 생산단가 및 이의 특성에 좌우되기 때문에 광학활성 중간원료의 수입은 곧 완제품의 수입과도 비교될 수 있으며 이의 생산 기술 또한 부가가치가 높아 기술이전을 기피할 뿐만 아니라 경우에 따라서는 광학활성 중간체 자체의 수출도 기피하는 경우도 있어 이의 기술도입은 거의 난망한 상태이다. 따라서 가능한 최종 제품에 근접한 광학활성 중간체를 얻는 것이 최선의 방법이 될 수 있으며, 이와 같은 관점에서 유용 광학활성 중간체인 (R)-β-아세틸머캅토이소부티레이트의 생물학적 생산공정 개발은 주요 광학활성 의약품인 캡토프릴, 토코페롤, 라살로시드 A, 칼시마이신, 락탐계 항생제, (R)- 및 (S)-무스콘등의 생산에 유용한 전구체로 사용될 수 있다.Since the cost of production of optically active pharmaceutical products depends on the production cost of intermediates and their characteristics, the import of optically active intermediates can be compared with the import of finished products, and their production technology is also high value added, which avoids the transfer of technology. In some cases, the export of the optically active intermediate itself may be avoided, and the introduction of this technology is almost hopeless. Therefore, it may be best to obtain optically active intermediates as close to the final product as possible, and from this point of view the development of biological production processes for the useful optically active intermediates (R) -β-acetylmercaptoisobutyrate is a major optically active drug. It can be used as a precursor useful for the production of phosphorus captopril, tocopherol, lasaloside A, calciycin, lactam antibiotics, (R)-and (S) -muscone and the like.
상기 광학활성 카르복실산은 화학식 2로 표시되는 카르복실산 에스터 라세미체(racemic carboxylic acid esters)로부터 에스터라제를 이용한 비대칭 가수분해법으로 생산할 수 있다.The optically active carboxylic acid may be produced by asymmetric hydrolysis using esterases from carboxylic acid racemates represented by the formula (2).
상기 화학식에서 R1, R2및 n은 화학식 1에서 정의된 바와 같고, R3는 알킬이다.R 1 , R 2 and n in the above formula are as defined in Formula 1, and R 3 is alkyl.
일반적으로 화학합성에 의해 광학활성 카르복실산을 생산하는 방법은 낮은 반응선택성과 복잡한 광학분할방법 및 심각한 환경오염 유발 등으로 인해 많은 난관에 부딪쳐 왔으며, 결정적으로 경제성을 저하시키는 요인이 되어 왔다. 따라서이에 대한 대안으로서 최근에는 미생물이나 효소와 같은 생체촉매를 이용한 광학활성체 생산방법이 개발되고 있다.In general, the method of producing optically active carboxylic acid by chemical synthesis has encountered many difficulties due to low reaction selectivity, complex optical splitting method and serious environmental pollution, and has been decisive factor in economic efficiency. Therefore, as an alternative to this, a method for producing an optically active agent using a biocatalyst such as a microorganism or an enzyme has recently been developed.
미생물 중에서는 특이적으로 (R)- 또는 (S)-카르복실산 에스터(carboxylic acid esters)만을 선택적으로 가수분해하는 활성을 갖는 균주가 보고된 바 있다(일본 특허공개공보, 평1-222798). 그러나 상기 특허에서 미생물 자체에 의하여 생산된 에스터라제는 소량으로, 이를 이용하여 광학활성 카르복실산을 대량으로 생산하기에는 부적합하다. 따라서, 일차적으로 미생물에서 분리한 에스터라제 유전자를 클로닝하고, 이를 일반적인 유전자 재조합 기술을 이용하여 대장균에서 발현하기 위한 기술에 연구의 초점이 맞춰지고 있다.Among microorganisms, strains having activity of selectively hydrolyzing only (R)-or (S) -carboxylic acid esters have been reported (Japanese Patent Laid-Open No. 1-222798). . However, the esterases produced by the microorganisms in this patent are in small amounts, and are not suitable for mass production of optically active carboxylic acids using them. Therefore, research is focused on a technique for cloning an esterase gene isolated from a microorganism and expressing it in E. coli using a general gene recombination technique.
이러한 연구의 하나로, 카르복실산 에스터 라세미체로부터 (R)-에스터에만 특이적으로 작용하여 광학활성 (R)-카르복실산을 생산하는 슈도모나스 플루오레센스(Pseudomonas fluorescensIFO3018) 유래의 에스터라제 유전자를 분리하고 그 염기서열 및 아미노산 서열을 밝혔으며, 이 유전자를 포함하는 형질전환 대장균에 의해 재조합 에스터라제를 생산하는 기술이 보고된 이래(일본 특허공개공보, 소64-67190), 슈도모나스 푸티다(Pseudomonas putidaFERM BP-3846) 유래 에스터라제 유전자도 클로닝되어 염기서열 및 이로부터 추정되는 아미노산 서열이 밝혀졌고, 마찬가지로 형질전환 대장균에 의한 발현기술과 이를 통해 생산된 재조합 에스터라제의 물리적 특성이 보고된 바 있다(미국 특허 5308765,미국 특허5482847, Ozakiet al., Biosci. Biotech. Biochem.59, 1204(1992)).In one such study, esterases derived from Pseudomonas fluorescens IFO3018, which act specifically on (R) -esters from carboxylic ester racemates to produce optically active (R) -carboxylic acids Since the gene was isolated, its nucleotide sequence and amino acid sequence were disclosed, and a technique for producing a recombinant esterase by transgenic E. coli containing the gene has been reported (Japanese Patent Laid-Open Publication No. 64-67190), Pseudomonas puti The Pseudomonas putida FERM BP-3846-derived esterase gene was also cloned to reveal the nucleotide sequence and the amino acid sequence estimated therefrom. Similarly, the expression technique by transformed Escherichia coli and the physical properties of the recombinant esterase produced therefrom This has been reported (US Pat. No. 5308765, US Pat. 5542847, Ozaki et al., Biosci. Biotech. Biochem . 59 , 1204 (1992)).
이들 두 미생물에서 유래한 에스터라제의 염기서열 및 아미노산 서열은 서로달랐는데 슈도모나스 플루오레센스 유래의 에스터라제는 218개의 아미노산으로 이루어져 있고, 슈도모나스 푸티다 유래의 에스터라제는 276개의 아미노산으로 구성된다. 상기 두 효소의 열에 대한 안정성은 슈도모나스 푸티다 유래 에스터라제의 경우 70℃로 슈도모나스 플루오레센스 유래 에스터라제의 50℃보다 높았다. 슈도모나스 푸티다 유래 에스터라제의 분자량은 약 30,000 달톤으로 등전점은 pH 3.90±0.1이었으며, 최적 pH는 7.0이고 pH 6.0-8.0에서 안정하였다.The base sequence and amino acid sequence of esterases derived from these two microorganisms differed from each other.Esterases derived from Pseudomonas fluorescens consisted of 218 amino acids and esterases derived from Pseudomonas putida consisted of 276 amino acids do. The heat stability of the two enzymes was 70 ° C. for Pseudomonas putida derived esterase, higher than 50 ° C. for Pseudomonas fluorescens derived esterase. The molecular weight of Pseudomonas putida derived esterase was about 30,000 Daltons with an isoelectric point of pH 3.90 ± 0.1, optimum pH 7.0 and stable at pH 6.0-8.0.
본 발명자들은 광학활성 카르복실산을 생산하는 새로운 균주 및 이로부터 유래한 신규 에스터라제를 찾고자 연구한 결과, 토양으로부터 분리한 슈도모나스 이어루지노사(Pseudomonas aeruginosa)로부터 70℃ 이상에서도 안정성을 보이며 (R)-카르복실산을 선택적으로 생산하는 약 35 kDa 크기의 신규 에스터라제와 이를 코딩하는 유전자를 분리함으로써 본 발명을 완성하였다.The present inventors have studied to find new strains producing optically active carboxylic acids and novel esterases derived therefrom, and showed stability even above 70 ° C from Pseudomonas aeruginosa isolated from soil (R The present invention was completed by separating a novel esterase of about 35 kDa that selectively produces) -carboxylic acid and the gene encoding it.
본 발명은 고온에서도 안정하고 카르복실산 에스터 라세미체에 특이적으로 작용하여 광학활성 카르복실산을 생산하는 새로운 에스터라제 효소 단백질과 이를 코딩하는 유전자를 제공하는 것을 목적으로 한다.It is an object of the present invention to provide a novel esterase enzyme protein which is stable even at high temperatures and specifically acts on carboxylic ester racemates to produce optically active carboxylic acids and genes encoding them.
또한 본 발명은 상기 에스터라제를 생산하는 신규 균주를 제공하고 그 물리화학적 특성을 밝히는 것을 목적으로 한다.It is also an object of the present invention to provide a novel strain producing the esterase and to reveal its physicochemical properties.
아울러 본 발명은 상기 에스터라제 유전자를 클로닝한 재조합 발현벡터를 이용하여 대장균 균주를 형질전환시키고, 상기 형질전환된 균주를 배양하여 배양액으로부터 에스터라제 효소를 생산하는 방법을 제공하는 것을 목적으로 한다.In addition, an object of the present invention is to provide a method for transforming E. coli strains using a recombinant expression vector cloned with the esterase gene, and culturing the transformed strain to produce an esterase enzyme from the culture. .
마지막으로 본 발명은 상기 에스터라제 효소를 사용하여 광학활성 카르복실산을 생산하는 방법을 제공하는 것을 목적으로 한다.Finally, an object of the present invention is to provide a method for producing an optically active carboxylic acid using the esterase enzyme.
도 1은 (R)-카르복실산을 생산하는 에스터라제를 코딩하는 유전자의 클로닝과정을 나타낸 모식도이고, 1 is a schematic diagram showing a cloning process of a gene encoding an esterase producing (R) -carboxylic acid,
도 2는 (R)-카르복실산을 생산하는 에스터라제를 코딩하는 유전자의 제한효소 지도와 위치분석결과를 나타낸 것이고, Figure 2 shows the restriction map and location analysis of the gene encoding the esterase to produce (R) -carboxylic acid,
B:BamH I,H:NheI,N:NcoI,R:NruI,K:KpnI,B1:BamH I/Sau3A B: Bam H I, H: Nhe I, N: Nco I, R: Nru I, K: Kpn I, B1: Bam H I / Sau 3A
RAM: (R)-아세틸머캅토이소부티레이트RAM: (R) -acetylmercaptoisobutyrate
(pTBL7, pTBL71, pTBL72는 pBluescript(R)KSII+ 벡터에 삽입된 것이고, 그 외의 인서트(insert)는 pUC119 클로닝 벡터에 삽입된 것이며, '+'와 '-'는 RAM의 생산여부를 나타낸다.)(pTBL7, pTBL71, pTBL72 are inserted into the pBluescript (R) KSII + vector, the other inserts are inserted into the pUC119 cloning vector, and '+' and '-' indicate RAM production.)
도 3a, 3b은 (R)-카르복실산을 생산하는 에스터라제의 아미노산 배열의 상동성을 다른 에스터라제와 비교한 결과이고, 3A and 3B show a result of comparing the homology of the amino acid sequence of the esterase producing (R) -carboxylic acid with other esterases,
1: 에스터라제 유전자estA 1 : Esterase gene est A
2: 트리아실글리세롤 리파아제(Moraxellasp.) 2 : triacylglycerol lipase ( Moraxella sp.)
3, 4: 트리아실글리세롤 리파아제(Psychrobacter immobilis) 3, 4 : triacylglycerol lipase ( Psychrobacter immobilis )
5, 6: 카르복실 에스터라제(Acinetobacter calcoaceticus) 5, 6 : carboxyl esterase ( Acinetobacter calcoaceticus )
도 4는 재조합 에스터라제 발현벡터 pES22b의 구조를 나타낸 제한효소 지도이고, 4 is a restriction map showing the structure of the recombinant esterase expression vector pES22b,
Ap: 앰피실린(ampicillin) 내성 유전자 Ap : ampicillin resistance gene
lac I: 베타 갈락토시다아제(β-galactosidase) 유전자 lac I : β-galactosidase gene
도 5는 재조합 대장균 PES를 배양하여 pES22b로부터 발현된 에스터라제를 포함한 단백질들의 SDS-PAGE 분석결과를 나타낸 것이고, Figure 5 shows the results of SDS-PAGE analysis of proteins containing an esterase expressed from pES22b by culturing recombinant E. coli PES,
1: 4시간,2: 2시간,3: 1시간,4: 0시간,M: 단백질 마커 1 : 4 hours, 2 : 2 hours, 3 : 1 hour, 4 : 0 hours, M : protein marker
도 6은 표준물질인 (R)형 및 (S)형 아세틸머캅토이소부티레이트와 재조합 에스터라제에 의하여 생산된 아세틸머캅토이소부티레이트로부터 각각 합성된 다이아스테레오머의 가스크로마토그램이다. FIG. 6 is a gas chromatogram of a diastereomer synthesized from standard (R) and (S) acetylmercaptoisobutyrate and acetylmercaptoisobutyrate produced by recombinant esterase.
(a): 재조합 대장균 BL21 PES에 의해 생산된 아세틸머캅토이소부티레이트의 다이아스테레오머 (a) : Diastereomer of acetylmercaptoisobutyrate produced by recombinant E. coli BL21 PES
(b): 표준물질 (S)-아세틸머캅토이소부티레이트(ii)와 (R)-아세틸머캅토이소부티레이트(iii) (b) : Standard (S) -acetylmercaptoisobutyrate (ii) and (R) -acetylmercaptoisobutyrate (iii)
상기 목적을 달성하기 위하여 본 발명은 슈도모나스 속 균주에서 유래한 신규 에스터라제 효소 단백질을 제공한다. 상기 에스터라제 효소는 서열번호 2로 기재되는 아미노산 서열을 가지며, 35,000 달톤의 분자량을 갖고, 등전점(isoelectric point)은 pH 6.4이다.In order to achieve the above object, the present invention provides a novel esterase enzyme protein derived from Pseudomonas genus strain. The esterase enzyme has an amino acid sequence set forth in SEQ ID NO: 2, has a molecular weight of 35,000 Daltons, and an isoelectric point is pH 6.4.
상기 에스터라제는 슈도모나스 이어루지노사(Pseudomonas aeruginosa)로부터 분리되며, 카르복실산 에스터 라세미체를 비대칭적으로 가수분해하여 광학활성 (R)- 또는 (S)-카르복실산 에스터를 선택적으로 생산하는 활성을 갖는다.The esterase is isolated from Pseudomonas aeruginosa and selectively produces optically active (R)-or (S) -carboxylic acid esters by asymmetric hydrolysis of carboxylic ester racemates. Have activity.
본 발명의 에스터라제의 아미노산 서열을 모락셀라 속(Moraxellasp.)과 사이크로박터 임모빌리스(Psychrobacter immobilis) 유래의 트리아실글리세롤 리파아제(triacylglycerol lipase)와 아시네토박터 칼코아세티쿠스(Acinetobacter calcoaceticus) 유래의 카르복실 에스터라제의 아미노산 서열과 비교한 결과, 본 발명에서 분리한 에스터라제의 169번째 아미노산인 세린을 함유한 글리신-X-세린-X-글리신(G-X-S-X-G)의 공통서열(consensus sequence)이 공통적으로 존재하였다. 상기 세린 잔기는 에스터라제 등의 효소의 활성 중심 부위로 알려져 있으며, 본 발명의 에스터라제에는 상기 공통서열의 활성을 돕는 히스티딘-글리신(His-Gly)의 또다른 공통서열이 세린 잔기에서 약 70개 아미노산 앞에 위치하고 있어 전형적인 세린 에스터라제의 특징을 나타낸다.The amino acid sequence of the esterase of the present invention was derived from the genus Moraxella sp., Psychrobacter immobilis , triacylglycerol lipase and acinetobacter calcoaceticus. Consensus of glycine-X-serine-X-glycine (GXSXG) containing serine, which is the 169th amino acid of the esterase isolated in the present invention, as compared with the amino acid sequence of the carboxyl esterase derived from sequences) were in common. The serine residue is known as an active central site of an enzyme such as an esterase. In the esterase of the present invention, another common sequence of histidine-glycine (His-Gly), which assists in the activity of the common sequence, is weak in the serine residue. Located in front of 70 amino acids, it is characteristic of typical serine esterases.
또한 본 발명은 상기 에스터라제를 암호화하는 유전자를 제공한다. 상기 유전자는 서열번호 1로 기재되는 염기서열을 가지며 서열번호 3으로 기재되는 CDS(coding sequence)를 가진다. 전체 염기서열 중 G+C 비율은 67.41%이다. 본 발명자들은 상기 에스터라제의 유전자 염기서열을 미국 GenBank에 수탁번호 AF170828로 등록하였다.The present invention also provides a gene encoding the esterase. The gene has a nucleotide sequence set forth in SEQ ID NO: 1 and has a CDS (coding sequence) set forth in SEQ ID NO: 3. The G + C ratio of the entire base sequence is 67.41%. The inventors have registered the gene sequence of the esterase in the US GenBank accession number AF170828.
또한 본 발명은 상기 에스터라제를 생산하는 슈도모나스 속 균주 슈도모나스 이어루지노사(Pseudomonas aeruginosa)를 제공한다. 구체적으로 국내 각지 및 인도에서 채취한 토양시료로부터 (R,S)-아세틸머캅토이소부틸산 메틸에스터((R,S)-acetylmercaptoisobutylic acid methyl ester)와 pH 지시약을 포함하는 일차선발 배지에서 균주를 배양하여 배양액의 색깔 변화를 통해 카르복실산 생물전환 균주를 선발하였다. 일차선발된 균주는 가스 크로마토그래피(gas chromatography, GC)로 분석하여 최종적으로 (R)-카르복실산 생산능력이 우수한 균주를 선발하였다.In another aspect, the present invention provides a Pseudomonas aeruginosa Pseudomonas strain Pseudomonas producing the esterase. Specifically, strains were selected from primary samples containing (R, S) -acetylmercaptoisobutylic acid methyl ester and pH indicators from soil samples collected from all over Korea and India. By culturing, the carboxylic acid bioconversion strain was selected through color change of the culture. The first selected strains were analyzed by gas chromatography (GC) to finally select strains having excellent (R) -carboxylic acid production capacity.
위와 같이 분리된 광학활성 카르복실산 생산 균주의 지방산과 퀴논(quinone) 조성 및 함량을 측정하여 동정한 결과, C18:1, C16:0이 지방산의 주요성분으로 존재하였으며, 수산화 지방산으로는 3-OH C10:0, 3-OH C12:0이 특징적으로 존재하였다. 또한 미생물의 화학분류학상 중요한 성분인 퀴논의 경우 유비퀴논-9(ubiquinone-9)를 함유하고 있었다. 이상의 결과를 종합할 때, 본 발명의 균주는 슈도모나스 속으로 동정되었고, 종(species) 결정을 위해 16S 리보소말 RNA(16S ribosomal RNA)서열을 조사한 결과 99.9%의 상동성으로서 슈도모나스 이어루지노사로 동정되었다. 상기 균주는 본 발명자들에 의해 생명공학연구소 유전자은행에 1999년 8월 4일자로 기탁되었다(수탁번호 : KCTC 8953P).As a result of measuring and determining the fatty acid and quinone composition and content of the isolated optically active carboxylic acid producing strains, C 18: 1 and C 16: 0 were present as the main constituents of the fatty acid. 3-OH C 10: 0 , 3-OH C 12: 0 were characteristically present. In addition, quinone, which is an important chemical taxonomy of microorganisms, contained ubiquinone-9. In summary, the strains of the present invention were identified as Pseudomonas genus, and 16S ribosomal RNA sequences were identified as Pseudomonas irruginosa as homology of 99.9% for species determination. It became. The strain was deposited by the inventors of the Biotechnology Research Institute Gene Bank on August 4, 1999 (Accession No .: KCTC 8953P).
한편, 상기에서 얻어진 에스테라제를 대량으로 생산하기 위하여 재조합 에스터라제 발현벡터를 제조하였다. 우선, 에스터라제의 정제를 쉽게 하기 위하여 서열번호 4 및 서열번호 5로 기재되는 염기서열을 갖는 두 개의 올리고뉴클레오티드를 합성하였다. 상기 올리고뉴클레오티드를 각각estA 유전자 N-말단 프라이머와 C-말단 프라이머로 사용하여 중합효소연쇄반응을 수행함으로써 estA 유전자의 C-말단에 6개의 히스티딘(histidine)을 코딩하도록 설계된 DNA 절편을 증폭하였다. 추출된 상기 DNA 절편을 PCR 클로닝 벡터(PCR cloning vector)인 pT7blue 벡터의 제한효소EcoR I 의 블런트 절단(blunt cleavage) 부위에 삽입하여 pT7ES 벡터를 제조한 다음, 상기 pT7ES와 pET22b를NcoI로 부분 절단하여 연결함으로써 재조합 에스터라제 발현벡터 pES22b를 제조하였다(도 1참조). 상기와 같이 제조된 발현벡터 pES22b의 제한효소 지도가도 4에 나타나 있다. 상기 pES22b를 대장균 BL21에 형질전환시켜 재조합 대장균 균주 BL21 PES를 얻었으며, 상기 균주를 생명공학연구소 유전자은행에 1999년 8월 4일자로 기탁하였다(수탁번호 : KCTC8952P).On the other hand, in order to produce a large amount of the esterase obtained in the above was prepared a recombinant esterase expression vector. First, two oligonucleotides having the nucleotide sequences shown in SEQ ID NO: 4 and SEQ ID NO: 5 were synthesized to facilitate purification of the esterase. DNA fragments designed to encode six histidines at the C-terminus of the estA gene were amplified by performing the polymerase chain reaction using the oligonucleotides as the est A gene N-terminal primers and the C-terminal primers, respectively. The extracted DNA fragment was inserted into a blunt cleavage site of the restriction enzyme Eco R I of pT7blue vector, which is a PCR cloning vector, to prepare a pT7ES vector, and then partially cleave the pT7ES and pET22b with Nco I. Recombinant esterase expression vector pES22b was prepared by ligation (see FIG. 1 ). The restriction map of the expression vector pES22b prepared as above is shown in FIG. 4 . The pES22b was transformed into Escherichia coli BL21 to obtain a recombinant Escherichia coli strain BL21 PES, which was deposited on August 4, 1999 to the Biotechnology Research Institute Gene Bank (Accession Number: KCTC8952P).
상기 재조합 대장균 균주를 배양하여 균체를 회수한 다음 파쇄하여 그 상등액으로부터 재조합 에스터라제를 분리하였다. 상기 재조합 에스터라제의 활성을 조사하기 위하여 (R,S)-아세틸머캅토이소부틸산 메틸에스터를 기질로 가수분해 시키고, 화학적으로 합성한 다이아스테레오머의 GC 분석과 비교하여 본 발명의 에스터라제에 의해 생산된 아세틸머캅토이소부티레이트의 광학활성을 조사하였다. 그 결과 본 발명의 재조합 에스터라제에 의해 생산된 광학활성 카르복실산은 (R)형임을 알 수 있었다. 일반적으로 화학적 방법에 의해 (R,S)-아세틸머캅토이소부틸산 메틸에스터로부터 (R)-아세틸머캅토이소부티레이트를 생산하는 경우에는 (S)형이 혼합된 라세미체의 형태로 생산되는 반면, 본 발명의 에스터라제를 이용하는 경우 (R)형만의 광학활성을 갖는 카르복실산이 쉽게 분리되므로 이를 이용하여 각종 의약품의 제조에 사용되는 광학활성 카르복실산을 제조할 수 있다.The recombinant E. coli strains were cultured to recover the cells, and then disrupted to isolate the recombinant esterase from the supernatant. In order to investigate the activity of the recombinant esterase, (R, S) -acetylmercaptoisobutyl acid methyl ester was hydrolyzed to a substrate, and compared to the GC analysis of the chemically synthesized diastereomer, the esterase of the present invention. The optical activity of the acetylmercaptoisobutyrate produced by the agent was investigated. As a result, it was found that the optically active carboxylic acid produced by the recombinant esterase of the present invention was (R) type. In general, when (R) -acetylmercaptoisobutyrate is produced from (R, S) -acetylmercaptoisobutyl acid methyl ester by a chemical method, the (S) form is produced in the form of a mixed racemate. On the other hand, in the case of using the esterase of the present invention, since the carboxylic acid having only the optical activity of the (R) type is easily separated, it can be used to prepare the optically active carboxylic acid used in the manufacture of various medicines.
한편, 본 발명의 재조합 대장균에 의해 생산된 재조합 에스터라제의 열안정성을 조사하기 위하여 배양된 균체를 파쇄하고 원심분리하여 에스터라제가 함유된 상등액을 각각 온도를 달리하여 유지한 후, 30℃에서 활성을 조사하였다. 그 결과 본 발명의 재조합 에스터라제의 활성은 70℃에서도 거의 변하지 않았으며, 이로부터 본 발명의 에스터라제가 70℃ 이상의 높은 온도에 대해서도 열안정성을 가짐을 알 수 있다.Meanwhile, in order to investigate the thermal stability of the recombinant esterase produced by the recombinant E. coli of the present invention, the cultured cells were crushed and centrifuged to maintain the supernatant containing the esterase at different temperatures, and then, at 30 ° C. The activity was investigated. As a result, the activity of the recombinant esterase of the present invention was hardly changed even at 70 ° C. From this, it can be seen that the esterase of the present invention has thermal stability even at a high temperature of 70 ° C or higher.
이하 본 발명을 실시예에 의해 상세히 설명한다.Hereinafter, the present invention will be described in detail by way of examples.
단, 하기 실시예는 본 발명을 예시하는 것으로, 본 발명의 내용이 이에 한정되는 것은 아니다.However, the following examples are illustrative of the present invention, and the content of the present invention is not limited thereto.
<실시예 1> 비대칭 가수분해 활성을 갖는 에스터라제 생산균주의 분리Example 1 Isolation of Esterase Producing Strains with Asymmetric Hydrolytic Activity
국내 및 인도 토양에서 채취한 토양을 시료로 균주를 선발하였다. 먼저 1g의 토양 시료를 9 ml의 증류수에 현탁하고, 이 용액을 10배, 100배, 1000배로 희석하였다. 상기 토양 현탁액을 영양배지(박토 쇠고기 추출물 3g/l, 펩톤 5g/l, 한천 15g/l)에 200㎕씩 도말하여 30℃ 배양기에서 24시간 동안 배양하였다. 여기서 성장한 균주를 순수분리하고, 이 중에서 일차선발 액체배지를 사용하여 광학활성 카르복실산 생산균주를 분리하였다. 일차선발 액체배지의 조성은 (R,S)-아세틸머캅토이소부티르산 메틸에스터((R,S)-acetylmercaptoisobutyric acid methyl ester) 1 v/v%, pH 지시약인 브로모크레졸 퍼플(bromocresol purple) 0.1 w/v%, 0.05M 인산칼륨 완충용액(potassium phosphate buffer, pH 7.0)으로 하였다.Strains were selected from the samples collected from domestic and Indian soils. First, 1 g soil sample was suspended in 9 ml of distilled water, and the solution was diluted 10 times, 100 times, and 1000 times. The soil suspension was plated in 200 μl each in a nutrient medium (bacto beef extract 3g / l, peptone 5g / l, agar 15g / l) and incubated in a 30 ° C. incubator for 24 hours. The strains grown here were purely separated, and among them, optically active carboxylic acid producing strains were isolated using a primary selection liquid medium. The composition of the primary selection medium was (R, S) -acetylmercaptoisobutyric acid methyl ester (v), 1 v / v%, bromocresol purple, pH indicator 0.1 w / v%, 0.05M potassium phosphate buffer (potassium phosphate buffer, pH 7.0).
순수분리한 균주를 1 ml의 일차선발 배지에 접종하고 3시간 동안 30℃ 배양기에서 배양한 후, 배양액의 색깔 변화를 조사하였다. 브로모크레졸 퍼플은 pH 6.8에서는 남보라색, pH 3.2에서는 노란색을 띠므로, 상기 카르복실산 에스터로부터 광학활성 카르복실산을 생산하는 균주의 경우 배양액의 pH가 낮아져 노란색을 띠게 된다. 따라서 배양액의 색이 노란색으로 변한 균주만을 일차적으로 카르복실산 생물전환 균주로 선발하였다. 일차 선발된 시료는 가스 크로마토그래피(gaschromatography, HEWLEET PACKARD 5890)로 분석하여 최종 (R)-카르복실산 생산능이 우수한 균주를 선발하였다.Pure strains were inoculated in 1 ml of primary selection medium and incubated in a 30 ° C. incubator for 3 hours, and then the color change of the culture was investigated. Since bromocresol purple has a violet color at pH 6.8 and yellow at pH 3.2, the strain producing optically active carboxylic acid from the carboxylic acid ester has a lower pH when the culture medium is yellow. Therefore, only strains that turned yellow in culture were selected as carboxylic acid bioconversion strains. The primary selected samples were analyzed by gas chromatography (HEWLEET PACKARD 5890) to select strains with excellent final (R) -carboxylic acid production capacity.
이상과 같이 일차 선발된 21개의 균주 중 (R)-카르복실산의 생산능이 가장 우수한 균주를 선발하기 위해 포도당 배지(포도당 2.66%, 황산암모늄 0.5%, 효모추출액 0.066%, 옥수수 침지액 2.0%, pH 6.8-7.0)를 사용하여 액체배양을 실시하였다. 24시간 동안 30℃에서 150rpm으로 교반하며 배양한 후, 3000rpm으로 30분간 원심분리하여 얻어진 균체를 생물전환 실험에 사용하였다. 상기 일차선발된 21 균주 중 최종적으로 가장 높은 (R)-카르복실산 생산수율을 보이는 균주 No. 1001을 우수 균주로 선발하였다.As described above, in order to select the strain having the highest production ability of (R) -carboxylic acid among the 21 selected strains, glucose medium (glucose 2.66%, ammonium sulfate 0.5%, yeast extract 0.066%, corn steep liquor 2.0%, liquid culture was carried out using (pH 6.8-7.0). After incubation with stirring at 150 ° C. at 30 ° C. for 24 hours, the cells obtained by centrifugation at 3000 rpm for 30 minutes were used in a bioconversion experiment. Strain No. 1 showing the highest yield of (R) -carboxylic acid among the 21 selected strains. 1001 was selected as a good strain.
<실시예 2> 분리된 균주의 동정Example 2 Identification of Isolated Strains
실시예 1에서 선발된 (R)-카르복실산 생물전환 균주 No. 1001의 동정은 지방산과 퀴논(quinone)의 조성 및 함량을 측정하여 기존의 데이터베이스와 비교함으로써 이루어졌으며, 결정 및 분석은 윤 등(Yoonet al., Int.J.Syst.Bacteriol.,47, 933, 1997)의 방법을 사용하였다.(R) -carboxylic acid bioconversion strain No. 1 selected in Example 1. The identification of 1001 was made by measuring the composition and content of fatty acids and quinones and comparing them with existing databases, and the determination and analysis were carried out by Yoon et al., Int. J. Syst. Bacteriol. , 47 , 933. , 1997).
지방산 분석결과, C18:1, C16:0이 지방산의 주요성분으로 존재하였으며, 수산화 지방산으로는 3-OH C10:0, 3-OH C12:0이 특징적으로 존재하였다. 또한 미생물의 화학분류학상 중요한 성분인 퀴논의 경우 유비퀴논-9(ubiquinone-9)를 함유하고 있었다. 이상의 결과를 종합할 때, 본 발명의 균주는 슈도모나스 속(Pseudomonassp.)으로 동정되었다. 한편 종(species) 결정을 위해 16S 리보소말 DNA(16S ribosomal DNA)서열을 조사하였으며, 그로부터 얻어진 본 발명의 균주의 16S rDNA의 염기서열은 서열번호 6으로 기재된다. 또한 상기 서열을 슈도모나스 속 균주 및 프로테오박테리아의 γ-서브클래스(subclass)의 16S rDNA 서열과 비교한 결과를 하기표 1에 나타내었다.As a result of fatty acid analysis, C 18: 1 and C 16: 0 were present as the main components of fatty acids, and 3-OH C 10: 0 and 3-OH C 12: 0 were characteristically represented as hydroxyl fatty acids. In addition, quinone, which is an important chemical taxonomy of microorganisms, contained ubiquinone-9. In summary, the strain of the present invention was identified as Pseudomonas sp. Meanwhile, 16S ribosomal DNA sequences were examined for species determination, and the base sequences of 16S rDNA of the strain of the present invention obtained therefrom are described in SEQ ID NO: 6. In addition, the sequence is compared with the 16S rDNA sequence of the γ-subclass of Pseudomonas genus strain and proteobacteria is shown in Table 1 below.
그 결과, 본 발명의 균주는 99.9%의 상동성으로서 슈도모나스 이어루지노사(Pseudomonas aeruginosa)로 동정되었으며, 상기 균주는 본 발명자들에 의해 생명공학연구소 유전자은행에 1999년 8월 4일자로 기탁되었다(수탁번호 : KCTC 8953P).As a result, the strain of the present invention was identified as Pseudomonas aeruginosa with a homology of 99.9%, and the strain was deposited by the inventors to the Biotechnology Research Institute Gene Bank on August 4, 1999 ( Accession No .: KCTC 8953P).
<실시예 3> 슈도모나스 이어루지노사로부터 염색체 DNA의 분리Example 3 Isolation of Chromosome DNA from Pseudomonas eryuginosa
실시예 2에서 동정된 슈도모나스 이어루지노사로부터 광학활성 (R)-카르복실산 메틸에스터에 특이적으로 작용하는 에스터라제를 암호화하는 염색체를 분리하기 위하여 Bio 101사의 게놈 DNA 분리 키트(G NOMETMDNA isolation kit)를 사용하였다. 먼저 5 ml의 LB배지(박토 트립톤 10%, 박토-이스트 추출물 5%, 염화나트륨 10%, pH 7.0)에 분리한 슈도모나스 이어루지노사를 접종하여 24시간 동안30℃로배양하였다. 세포를 충분히 성장시킨 후, 5분간 원심분리하여 세포를 수확하고, 얻어진 세포 펠렛을 세포 현탁 용액[cell suspension solution, 10mM Tris-Cl(pH 8.0), 0.1M EDTA(pH 8.0)]에 용해하여 1.85 ml의 세포현탁액을 제조하였다. 상기 세포현탁액에 50 ㎕의 RNase 용액과 100 ㎕의 세포 분해/변성 용액(cell lysis/denaturation solution, 0.5% SDS)을 넣어 잘 혼합한 후, 55℃에서 15분간 배양하였다. 그 후 시료속의 단백질을 제거하기 위하여 프로테아제 25 ㎕를 혼합하여 55℃에서 1시간 동안 반응시키고, 500 ㎕의 투석용 완충용액을 넣어 1.5 ml 튜브에 시료를 나눈 다음 4℃에서 10분간 냉각시켰다. 그 후 12,000rpm으로 10분간 원심분리하여 펠렛을 침전시키고, 상등액을 15 ml 튜브에 옮겼다. 여기에 2 ml의 TE 완충용액(Tris-EDTA, pH 7.5)과 100% 에탄올 8 ml을 첨가하여 DNA를 침전시켰다. 이후 12,000rpm으로 15분간 원심분리하여 상등액을 버린 다음, DNA를 공기중에서 건조시키고, 건조된 DNA에 TE 완충액을 가하여 용해시켰다. 이 DNA를 제한효소Sau3A로 부분절단하고 1% 아가로스 겔 (agarose gel)을 사용하여 전기영동한후, 이 DNA 단편을 겔로부터 용출하여 부분 절단된 슈도모나스 이어루지노사의 게놈 DNA 라이브러리를 얻었다.Genome DNA Separation Kit from Bio 101 (G NOME ™) for separating chromosomes encoding esterases that specifically act on optically active (R) -carboxylic acid methyl esters from Pseudomonas irruginosa identified in Example 2 DNA isolation kit) was used. First, inoculated with Pseudomonas irruginosa separated in 5 ml of LB medium (10% bacto tryptone, 5% bacto-yeast extract, 10% sodium chloride, pH 7.0) and incubated at 30 ℃ for 24 hours. After sufficient growth of the cells, the cells are harvested by centrifugation for 5 minutes, and the obtained cell pellet is dissolved in cell suspension solution (10 mM Tris-Cl (pH 8.0), 0.1 M EDTA (pH 8.0)) to 1.85. ml of cell suspension was prepared. 50 μl of RNase solution and 100 μl of cell lysis / denaturation solution (0.5% SDS) were added to the cell suspension, followed by well mixing and incubation at 55 ° C. for 15 minutes. Thereafter, 25 μl of protease was mixed and reacted at 55 ° C. for 1 hour to remove the protein in the sample. 500 μl of dialysis buffer was added thereto, the sample was divided into 1.5 ml tubes, and cooled at 4 ° C. for 10 minutes. The pellet was then centrifuged at 12,000 rpm for 10 minutes to precipitate the pellet, and the supernatant was transferred to a 15 ml tube. DNA was precipitated by adding 2 ml of TE buffer (Tris-EDTA, pH 7.5) and 8 ml of 100% ethanol. Thereafter, the supernatant was discarded by centrifugation at 12,000 rpm for 15 minutes, and the DNA was dried in air and dissolved by adding TE buffer to the dried DNA. The DNA was partially cleaved with restriction enzyme Sau3 A and electrophoresed using a 1% agarose gel, and the DNA fragment was eluted from the gel to obtain a genomic DNA library of Pseudomonas irruginosa.
<실시예 4> 재조합 플라스미드의 제조Example 4 Preparation of Recombinant Plasmids
실시예 3과 같이 슈도모나스 이어루지노사로부터 크로모좀 DNA(chromosome DNA)를 추출한 후, 제한효소Sau3A1으로 부분 절단하였다. 이를 미리 제한효소BamH I으로 절단된 클로닝 벡터 pBluescript KSII+(Stratagene사, 미국)에 삽입하여 대장균 DH5α(Stratagene사, 미국)에 도입하였다. 상기 형질전환체 중에서 에스터라제를 코딩하는 유전자를 함유한 균주를 선발하기 위하여 다음과 같은 선발실험을 수행하였다.As in Example 3, chromosome DNA was extracted from Pseudomonas irruginosa, and then partially digested with restriction enzyme Sau 3A1. This was previously inserted into the cloning vector pBluescript KSII + (Stratagene, USA) cut with the restriction enzyme Bam H I and introduced into E. coli DH5α (Stratagene, USA). In order to select a strain containing a gene encoding an esterase from the transformants, the following selection experiment was performed.
우선, 형질전환체를 리파아제의 효소활성 측정 기질인 트리부티린(tributyrin)이 함유된 한천배지(트리부티린 10g/l, 한천 15g/l, 트립톤 10g/l, 효모 추출물 5g/l, 염화나트륨 10g/l)에 도말하여 배양하고, 트리부티린이 분해되어 콜로니 주변에 투명한 환이 생기는 균주를 1차로 선별하였다. 이들을 다시 에스터라제 기질로 사용되는 (R,S)-아세틸머캅토이소부티르산 메틸에스터 1 v/v%가 함유된 한천배지((R,S)-아세틸머캅토이소부티르산 메틸에스터 1 v/v%, 한천 15g/l, 트립톤 10g/l, 효모 추출물 5g/l, 염화나트륨 10g/l)에 접종하여, 콜로니 주변의 색이 노란색으로 변색되는 균주만을 2차로 선별하였다. 최종적으로 실제 본 에스터라제 반응 기질인 (R,S)-아세틸머캅토이소부틸산 메틸에스터를 사용하여 (R)-아세틸머캅토이소부티레이트를 생산하는 균주를 선발하였다. 생산된 (R)-아세틸머캅토이소부티레이트의 분석에는 가스 크로마토그래피(HEWLETT PACKARD 5890)와 고성능 액체 크로마토그래피[HPLC, 키렉스 컬럼(chirex(R) NGLY DNB, 페노메넥스사, 미국), 20mM 암모늄 아세테이트(Ammonium acetate)/메탄올, 영린社, 한국]를 사용하였다.First, the transformants were agar medium containing tributyrin (tributyrin), a substrate for measuring enzyme activity of lipase (tributyrin 10g / l, agar 15g / l, tryptone 10g / l, yeast extract 5g / l, sodium chloride 10 g / l) was incubated and cultured, and a strain of tributyrin decomposed to form a transparent ring around the colonies was selected first. These were again agar medium containing 1 v / v% of (R, S) -acetylmercaptoisobutyric acid methyl ester used as an esterase substrate (v / v of (R, S) -acetylmercaptoisobutyric acid methyl ester). %, Agar 15g / l, tryptone 10g / l, yeast extract 5g / l, sodium chloride 10g / l), and only the second strain was selected to change the color around the colony yellow. Finally, a strain producing (R) -acetylmercaptoisobutyrate was selected using (R, S) -acetylmercaptoisobutyl acid methyl ester, which is the actual esterase reaction substrate. Analysis of the produced (R) -acetylmercaptoisobutyrate included gas chromatography (HEWLETT PACKARD 5890) and high performance liquid chromatography (HPLC, Chirex (R) NGLY DNB, Phenomenex, USA), 20 mM Ammonium acetate / methanol, Younglin, Korea] was used.
상기와 같은 과정을 통해 (R)-아세틸머캅토이소부티레이트 생산활성을 가진 4.5 kb 크기의 플라스미드인 pTBL7을 포함하고 있는 형질전환체를 분리하였다.Through the above procedure, a transformant containing pTBL7, a 4.5 kb plasmid having (R) -acetylmercaptoisobutyrate production activity, was isolated.
<실시예 5> 재조합 플라스미드의 분리, 분석 및 서브클로닝(subcloning)Example 5 Isolation, Analysis, and Subcloning of Recombinant Plasmids
에스터라제를 암호화하는 유전자의 개략적인 클로닝 과정을도 1에 나타내었다. 형질전환된 대장균에서 DNA의 추출은 일반적인 비등(boiling) 방법(Sambrooket al., Molecular cloning, 1989)과 플라스미드 미디 키트(퀴아젠 사, 미국)를 사용한 추출방법을 사용하였으며, 분석은 제한효소(KpnI,BamHI,NheI,NruI,NcoI,ScaI 등)로 절단한 후 0.8-1% 아가로스 겔을 사용하여 전기영동으로 행하였다.A schematic cloning procedure of the gene encoding the esterase is shown in FIG. 1 . DNA extraction from transformed E. coli was carried out using a common boiling method (Sambrook et al. , Molecular cloning, 1989) and an extraction method using a plasmid midi kit (Qiagen, USA). Kpn I, Bam HI, Nhe I, Nru I, Nco I, Sca I, etc.), and then subjected to electrophoresis using 0.8-1% agarose gel.
삽입된 유전자의 제한효소 지도와 효소 위치 분석결과를도 2에 나타내었다.도 2에서 pTBL7, pTBL71, pTBL72는 pBluescript(R)SKII+ 벡터에 삽입한 것이고, 그 외의 인서트(insert)들은 pUC119 클로닝 벡터(Stratagene사, 미국)에 삽입한 것이다.The restriction map and the enzyme position analysis of the inserted gene are shown in FIG. 2 . In FIG. 2 , pTBL7, pTBL71, and pTBL72 are inserted into pBluescript (R) SKII + vector, and other inserts are inserted into pUC119 cloning vector (Stratagene, USA).
4.5 kb의 pTBL7을 제한효소인KpnI로 절단하여 각 DNA 단편의 (R)-아세틸머캅토이소부티레이트의 생산활성을 조사한 결과, 2.6 kb의 pTBL72에서 (R)-아세틸머캅토이소부티레이트 생산활성이 나타나 목적하는 에스터라제가 존재하는 것이 확인되었다.Cutting the pTBL7 of 4.5 kb with restriction enzymes Kpn I and each DNA fragment of (R) - acetyl mercapto toy small butyrate production active-acetyl mercapto toy small research production activity of butyrate result, pTBL72 (R) from the 2.6 kb It appeared that the desired esterase exists.
계속하여 pTBL72를 제한효소BamHI,NheI,NruI로 절단하여 서브클로닝한 결과,NheI와NruI로 절단된 pTBL76이 (R)-아세틸머캅토이소부티레이트의 생산능을 가진 것으로 확인되어, pTBL76에 포함된 DNA 인서트가 (R)-아세틸머캅토이소부티레이트의 생산능을 가진 최소부위인 것으로 확인되었다. 또한 (R)-아세틸머캅토이소부티레이트의 생산능을 가진 에스터라제를 코딩하는 DNA의 크기가 약 1.1-kb 이내인 것으로 밝혀졌다.Subsequently, pTBL72 was cleaved with restriction enzymes Bam HI, Nhe I, Nru I and subcloned. As a result, it was confirmed that pTBL76 cleaved with Nhe I and Nru I had a production capacity of (R) -acetylmercaptoisobutyrate. DNA inserts contained in pTBL76 were found to be the smallest sites with the capacity to produce (R) -acetylmercaptoisobutyrate. It has also been found that the size of the DNA encoding the esterase having the ability to produce (R) -acetylmercaptoisobutyrate is within about 1.1-kb.
<실시예 6> 클로닝된 에스터라제 유전자의 염기서열 및 이로부터 추정되는 아미노산 서열Example 6 Base Sequence of Cloned Esterase Gene and Amino Acid Sequence Inferred from It
pTBL72의 핵산염기서열을 분석하기 위하여 단계적으로 약 300-400 bp 정도로 크기를 줄인 DNA 래더(ladder)를 제조하고 염기서열 분석을 행하여, 약 2455 bp의 염기서열을 얻었다. 염기서열 분석은 자동 염기서열분석기(ABI PRISM 377 autosequencer, Perkin-Elmer, 미국)를 사용하여 행하였다.In order to analyze the nucleic acid base sequence of pTBL72, a DNA ladder having a size reduced to about 300-400 bp was prepared stepwise and subjected to sequencing to obtain a base sequence of about 2455 bp. Sequencing was performed using an automatic sequencing machine (ABI PRISM 377 autosequencer, Perkin-Elmer, USA).
2455 bp의 염기서열 중 전사해독틀(open reading frame, ORF)을 조사한 결과 1개의 ORF가 존재하는 것으로 확인되었으며, BLAST 서치를 통하여 상동성(homology)를 조사한 결과 이 ORF가 에스터라제, 리파아제와 높은 상동성을 갖는 것으로 나타났다. 이를estA로 명명하고 상기 염기서열을 미국 GenBank에 수탁번호 AF170828로 등록하였다.An open reading frame (ORF) of the 2455 bp sequence confirmed that one ORF was present, and the homology was examined through the BLAST search and the ORF was associated with esterases and lipases. It has been shown to have high homology. This was named est A and the nucleotide sequence was registered with US GenBank under accession number AF170828.
상기에서 분리한 광학활성 (R)-카르복실산을 생산하는 에스터라제 유전자는 서열번호 1의 288번째 염기부터 1236번째 염기까지의 서열로 이루어지는 948개의 염기서열로 구성되며, 이 유전자가 암호화하는 에스터라제는 316개의 아미노산으로 구성되는 효소로서, 상기 유전자의 전체 염기서열 중 구아닌/시토신 비율(G+C ratio)은 67.41%, 분자량은 약 35 kDa이고, 등전점은 pH 6.4로 조사되었다. 상기 에스터라제는 기존에 보고된 슈도모나스 플루오레센스 또는 슈도모나스 푸티다 유래의 에스터라제보다 크기가 좀 더 크며, 이들 효소와는 아미노산 서열이 다른 새로운 효소로 판명되었다.The esterase gene that produces the optically active (R) -carboxylic acid isolated from the above is composed of 948 nucleotide sequences consisting of the sequence from 288th base to 1236th base of SEQ ID NO: 1. Esterase is an enzyme consisting of 316 amino acids. The guanine / cytosine ratio (G + C ratio) in the total sequence of the gene was 67.41%, the molecular weight was about 35 kDa, and the isoelectric point was investigated at pH 6.4. The esterase was found to be a newer enzyme that is larger in size than previously reported esterase derived from Pseudomonas fluorescens or Pseudomonas putida, and has an amino acid sequence different from these enzymes.
또한도 3a, 3b에 나타낸 바와 같이 모락셀라 속(Moraxellasp.)과 사이크로박터 임모빌리스(Psychrobacter immobilis) 유래의 트리아실글리세롤 리파아제(triacylglycerol lipase)와 아시네토박터 칼코아세티쿠스(Acinetobacter calcoaceticus) 유래의 카르복실 에스터라제와 아미노산 서열의 상동성을 비교한 결과, 본 발명에서 새로이 분리한 에스터라제의 169번째 아미노산인 세린(serine)을 함유한 글리신-X-세린-X-글리신(G-X-S-X-G)의 공통 서열(consensus sequence)이 모두 존재하였다. 상기 세린 잔기는 에스터라제 등의 효소 활성 중심부위로 알려져 있다.도 3a및도 3b에서 실선의 박스내의 아미노산 서열은 공지의 세린 에스터라제와 상동성을 가지는 아미노산 배열(-HG-와 -GXSXG-)을 나타내는 것이고, 회색 및 진회색의 부분은 그외의 아미노산 배열 중 상동이 높은 부분을 나타내는 것으로 상동성이 높은 부분일수록 검은색의 음영으로 나타내었다. 3A and 3B , triacylglycerol lipase and Acinetobacter calcoaceticus derived from Moraxella sp., Psychrobacter immobilis , and Acinetobacter calcoaceticus As a result of comparing the homology of the carboxyl esterase derived from the amino acid sequence, glycine-X-serine-X-glycine (GXSXG) containing serine, the 169th amino acid of the newly isolated esterase in the present invention. Consensus sequences were all present. The serine residue is known as the center of an enzyme activity such as esterase. 3A and 3B , the amino acid sequence in the solid box indicates the amino acid sequence (-HG- and -GXSXG-) having homology with known serine esterases, and the gray and dark gray portions represent other amino acid sequences. The higher homology is shown, and the higher homology is represented by the shade of black.
또한 상기 세린을 포함하는 공통 서열의 세린 잔기로부터 약 70개 아미노산앞에 상기 서열의 활성을 돕는 히스티딘-글리신(His-Gly)의 또다른 공통 서열이 위치하여 전형적인 세린 에스터라제의 특성을 나타내므로, 본 발명의 에스터라제는 세린 에스터라제의 일종임을 알 수 있다.In addition, another consensus sequence of histidine-glysine (His-Gly), which assists the activity of the sequence, is positioned about 70 amino acids from the serine residue of the consensus sequence including the serine, thereby exhibiting typical serine esterase properties. It can be seen that the esterase of the present invention is a kind of serine esterase.
<실시예 7> 재조합 에스터라제를 고발현하는 형질전환 대장균 균주의 개발Example 7 Development of Transgenic E. Coli Strain Highly Expressing Recombinant Esterase
estA 유전자를 포함하는 발현벡터를 제조하기 위해 pET22b(Novagen사, 미국)의 제한효소NcoI와BamHI 부위에 서열번호 1로 기재되는 estA 유전자를 삽입하여 발현벡터 pES22b를 제조하였다.In order to prepare an expression vector containing the estA gene, the expression vector pES22b was prepared by inserting the estA gene of SEQ ID NO: 1 into the restriction enzymes Nco I and Bam HI sites of pET22b (Novagen, USA).
먼저 발현된 에스터라제의 정제를 쉽게 하기 위하여 플라스미드 pTBL74를 주형으로 하는 중합효소 연쇄반응(polymerase chain reaction)을 수행하였다. estA 유전자 N-말단 프라이머와 C-말단 프라이머로는 각각NcoI의 제한효소 절단 부위를 가지며 서열번호 4로 기재되는 올리고뉴클레오티드와BamHI의 제한효소 절단 부위를 가지며 서열번호 5로 기재되는 염기서열을 갖는 올리고뉴클레오티드를 사용하였다. C-말단 프라이머의 경우 6개의 히스티딘이 첨가될 수 있도록 히스티딘을 코딩하는 염기서열을 함유하도록 설계하였다. PCR은 94℃에서 1분, 58℃에서 1분, 72℃에서 1분으로 구성되는 사이클을 30회 반복하여 실시하였다.First, in order to facilitate the purification of the expressed esterase, a polymerase chain reaction was carried out using plasmid pTBL74 as a template. The estA gene N-terminal primer and C-terminal primer each have a restriction enzyme cleavage site of Nco I, an oligonucleotide represented by SEQ ID NO: 4 and a restriction enzyme cleavage site of Bam HI, and a nucleotide sequence described by SEQ ID NO: 5 Oligonucleotides were used. In the case of the C-terminal primer, it was designed to contain a base sequence encoding histidine so that 6 histidines could be added. PCR was repeated 30 times in a cycle consisting of 1 minute at 94 ° C, 1 minute at 58 ° C, and 1 minute at 72 ° C.
상기와 같은 반응으로estA 유전자의 C-말단에 6개의 히스티딘(His)이 연결되도록 설계된 DNA 단편을 대량으로 증폭한 후, 이를 퀴아젠 겔 용출 키트(Quiagen사, 미국)로 추출하였다. 상기 DNA 단편을 pET22b 벡터(Novagen사, 미국)의 NcoI과 BamHI의 제한효소 부위에 삽입하였으며, 그 제한효소 지도를도 4에 나타내었다. 상기 재조합 플라스미드 pES22b를 대장균 BL21(Invitrogen사, 미국) 컴피턴트 세포와 혼합한 후 얼음에 30분간 방치하고 42℃에서 30초간 열충격을 가함으로써 형질전환된 균주를 제조하였다. 상기 형질전환체를 BL21 PES라 명명하고 1999년 8월 4일자로 생명공학연구소 유전자은행에 기탁하였다(수탁번호 : KCTC 8952P).In the above reaction, a large amount of DNA fragments designed to connect six histidines (His) to the C-terminus of the est A gene was extracted in a Qiagen gel elution kit (Quiagen, USA). Was inserted into the DNA fragment in the NcoI and BamHI restriction sites of the pET22b vector (Novagen, USA), it is shown the restriction map in Fig. The recombinant plasmid pES22b was mixed with E. coli BL21 (Invitrogen, USA) competent cells and left for 30 minutes on ice and heat shock was applied at 42 ° C. for 30 seconds to prepare a transformed strain. The transformant was named BL21 PES and deposited with the Biotechnology Research Institute Gene Bank on August 4, 1999 (Accession No .: KCTC 8952P).
<실시예 8> 재조합 대장균에서의 에스터라제 발현양상Example 8 Expression of Esterase in Recombinant Escherichia Coli
실시예 7에서 제조한 재조합 대장균에서의estA 유전자의 발현양상을 조사하기 위하여 SDS-PAGE(sodium dodecyl sulfate-polyacrylamide gel electrophoresis)를 아래와 같이 수행하였다. 우선, 10%의 폴리아크릴라마이드겔(Biorad사, 미국)을 전기영동장치에 설치하고 전기영동장치에 이동완충액(트리스 글리신 완충용액)을 채워 전기영동을 준비하였다. 먼저estA가 함유된 pTBL72를 함유하는 대장균 BL21 PES를 LB 배지를 사용하여 37℃에서 배양하고 접종후 각각 1시간, 2시간 및 4시간 후 배양액을 취하여 3000rpm으로 30분간 원심분리하였다. 원심분리하여 균체를 회수한 후, 0.2배 부피의 균체 파쇄용 완충용액(50mM 인산나트륨 완충용액, pH 7.8, 300mM 염화나트륨, Quiagen사, 미국)을 가하여 5배 농축 현탁액을 만들었다. 초음파 파쇄기를 이용하여 균체를 파쇄한 후, 원심분리하고 에스터라제가 함유된 상등액 50 ㎕를 취하여 샘플 완충액 50 ㎕과 혼합하고 95℃에서 5분간 전처리한 후 10,000rpm에서 3-4분간 원심분리하였다. 원심분리한 상등액을 분자량 표준품과 함께 웰에 20 ㎕씩 로딩하고 120V의 전압으로 전기영동하였다. 염색선이 겔의 맨 아래까지 전개되면 전기영동을 멈추고 겔을 꺼낸 후 쿠마시 블루(CoomassieBrilliant Blue)로 염색하였다. 대조군으로는estA 유전자를 삽입하지 않은 대장균의 단백질을 사용하였으며, 그 결과를도 5에 나타내었다.Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was performed to investigate the expression patterns of the est A gene in the recombinant E. coli prepared in Example 7. First, 10% polyacrylamide gel (Biorad Co., USA) was installed on an electrophoresis device, and electrophoresis was performed by filling a mobile buffer solution (tris glycine buffer solution) in the electrophoresis device. First, E. coli BL21 PES containing pTBL72 containing est A was incubated at 37 ° C. using LB medium, and cultured after 1, 2 and 4 hours after inoculation, respectively, and centrifuged at 3000 rpm for 30 minutes. After the cells were recovered by centrifugation, 0.2-fold volume of cell disruption buffer solution (50 mM sodium phosphate buffer, pH 7.8, 300 mM sodium chloride, Quiagen, USA) was added to form a 5-fold suspension. The cells were crushed by using an ultrasonic crusher, centrifuged, 50 μl of the supernatant containing esterase was mixed with 50 μl of sample buffer, pretreated for 5 minutes at 95 ° C., and centrifuged at 10,000 rpm for 3-4 minutes. Centrifuged supernatants were loaded into the wells with a molecular weight standard of 20 μl and electrophoresed at a voltage of 120V. When the dye line developed to the bottom of the gel, electrophoresis was stopped, the gel was taken out, and stained with Coomassie Brilliant Blue. As a control, E. coli protein without the est A gene was used, and the results are shown in FIG. 5 .
그 결과 대조군에서는 본 에스터라제의 아미노산 배열로부터 추론된 분자량인 36,400 달톤 부위의 밴드가 거의 나타나지 않았고, 에스터라제의 발현 1시간, 2시간, 3시간, 4시간 후 시료속의 단백질 분자량 양상은 약 35,000 달톤 부위에서 진한 밴드를 보여 에스터라제가 효과적으로 생산되었음을 알 수 있었다. 또한 그 분자량이 아미노산 배열로부터 추론된 분자량과 상당히 근접하여 이 단백질 밴드가 에스터라제임을 확인할 수 있었다.As a result, in the control group, almost no band of 36,400 Daltons, the molecular weight inferred from the amino acid sequence of the esterase, appeared, and the protein molecular weight in the sample was about 1, 2, 3, and 4 hours after the expression of the esterase. The dark band at the 35,000 dalton site showed that the esterase was effectively produced. It was also confirmed that this protein band was an esterase because its molecular weight was very close to the molecular weight deduced from the amino acid sequence.
<실시예 9> 재조합 에스터라제의 활성 조사Example 9 Investigation of Activity of Recombinant Esterase
화학적으로 (R,S)-아세틸머캅토이소부틸산 메틸에스터로부터 (R)-아세틸머캅토이소부티레이트를 생산하려면 (S)형이 혼합된 라세미체로 생산된다. 따라서 실시예 7의 재조합 대장균에 의해 생산된 에스터라제가 (R)형과 (S)형이 혼합된 라세미체가 아니라 (R)형 또는 (S)형만의 순수한 광학활성을 갖는 카르복실산을 생산하는지 확인하기 위하여 가스 크로마토그래피를 통해 생산된 물질의 광학활성을 조사하였다. 표준물질로서 화학적으로 (R)형과 (S)형의 아세틸머탑토이소부티레이트 다이에스테레오머를 합성하고, 그의 GC 피크와 실시예 7의 재조합 대장균에 의해 생산된 아세틸머캅토이소부티레이트의 다이에스테레오머의 피크를 비교하여도 6에 나타내었다. 그 결과도 6에서 알 수 있듯이 재조합 에스터라제에 의해 생산된 아세틸머캅토이소부티레이트는 (R)형임을 알 수 있다.Chemically, to produce (R) -acetylmercaptoisobutyrate from (R, S) -acetylmercaptoisobutyl acid methyl ester, the (S) form is produced as a mixed racemate. Therefore, the esterase produced by the recombinant E. coli of Example 7 produced a carboxylic acid having pure optical activity of only (R) or (S) type, not racemate of type (R) and (S). In order to check whether the optical activity of the material produced by gas chromatography was investigated. Chemically synthesized (R) and (S) acetylmertopisobutyrate diesters as a standard, and the GC peak and the dies of acetylmercaptoisobutyrate produced by the recombinant E. coli of Example 7 The peaks of the stereomers are compared and shown in FIG. 6 . As a result, as can be seen in Figure 6 it can be seen that the acetylmercaptoisobutyrate produced by the recombinant esterase (R) type.
<실시예 10> 재조합 에스터라제의 열안정성Example 10 Thermal Stability of Recombinant Esterase
실시예 7에서 제조한 재조합 대장균 BL21 PES에 의하여 생산된 슈도모나스 이어루지노사 유래 에스터라제의 열안정성을 아래와 같이 조사하였다. 먼저estA가 함유된 pTBL72를 함유하는 대장균 BL21 PES를 LB 배지를 사용하여 37℃에서 24시간 동안 배양하고 원심분리하여 균체를 회수한 후, 0.2배 부피의 균체 파쇄용 완충용액(50mM 인산나트륨 완충용액, pH 7.8, 300mM 염화나트륨, Quiagen사, 미국)을 가하여 5배 농축 현탁액을 만들었다. 초음파 파쇄기를 이용하여 균체를 파쇄한 후, 원심분리하고 에스터라제가 함유된 상등액을 이용하여 열안정성을 조사하였다. 즉, 30℃, 40℃, 50℃, 60℃, 70℃에서 1시간 동안 유지시킨 후, 30℃에서 에스터라제의 활성을 조사하였다. 에스터라제 활성은 생산된 (R)-아세틸머캅토이소부티레이트의 양을 가스 크로마토그래피로 측정하여, 건조 세포 중량(dry cell weight, DCW) 1 mg당 활성으로 표시하였으며, 그 결과를 하기표 2에 나타내었다.The thermal stability of Pseudomonas irruginosa-derived esterase produced by the recombinant E. coli BL21 PES prepared in Example 7 was investigated as follows. First, E. coli BL21 PES containing pTBL72 containing est A was incubated at 37 ° C. for 24 hours using LB medium, and the cells were recovered by centrifugation. Then, 0.2-fold volume of cell disruption buffer solution (50 mM sodium phosphate buffer) was used. Solution, pH 7.8, 300 mM sodium chloride, Quiagen, USA) was added to form a 5-fold concentrated suspension. The cells were crushed by using an ultrasonic crusher, centrifuged, and thermal stability was investigated using a supernatant containing esterase. That is, after maintaining for 1 hour at 30 ℃, 40 ℃, 50 ℃, 60 ℃, 70 ℃, the activity of the esterase at 30 ℃ was investigated. Esterase activity was determined by gas chromatography measuring the amount of (R) -acetylmercaptoisobutyrate produced, expressed as activity per mg of dry cell weight (DCW), and the results are shown in Table 2 below. Shown in
상기표 2에서 알 수 있듯이, 본 발명의 재조합 에스터라제는 온도변화에따른 활성변화가 거의 없었으며, 70℃의 고온에서도 거의 활성이 감소하지 않아 열안정성이 매우 우수한 것으로 나타났다.As can be seen in Table 2 , the recombinant esterase of the present invention showed little change in activity due to temperature change, and showed very excellent thermal stability because the activity was hardly decreased even at a high temperature of 70 ° C.
본 발명의 슈도모나스 이어루지노사 유래의 신규 에스터라제는 카르복실산 에스터 라세미체로부터 광학활성 카르복실산을 생산하는 능력이 뛰어나며 70℃ 이상의 고온에서도 열에 대한 안정성을 나타내므로, 여러 가지 생리활성 의약품 특히 고혈압 치료제인 켑토프릴 및 아날라프릴 등의 생산에 유용하게 사용될 수 있고, 기존의 화학합성에 의한 광학활성 카르복실산의 생산에 비해 반응선택성이 높을 뿐 아니라, 공정이 간단하며, 환경오염물질의 배출이 적은 등의 장점이 있다.Novel esterases derived from Pseudomonas irruginosa of the present invention have an excellent ability to produce optically active carboxylic acids from carboxylic ester racemates and exhibit stability to heat even at high temperatures of 70 ° C. or higher. In particular, it can be usefully used in the production of high blood pressure treatment agents such as meptopril and analapril, and has a high reaction selectivity compared to the production of optically active carboxylic acids by conventional chemical synthesis, and a simple process and environmental pollutants. There are advantages such as low emissions.
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