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JP2008099635A - New antimicrobial protein, method for producing the same and use thereof - Google Patents

New antimicrobial protein, method for producing the same and use thereof Download PDF

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Publication number
JP2008099635A
JP2008099635A JP2006286432A JP2006286432A JP2008099635A JP 2008099635 A JP2008099635 A JP 2008099635A JP 2006286432 A JP2006286432 A JP 2006286432A JP 2006286432 A JP2006286432 A JP 2006286432A JP 2008099635 A JP2008099635 A JP 2008099635A
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protein
gly
thr
dna
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Kenichi Kodaira
憲一 小平
Yasuto Nishino
泰斗 西野
Masanori Nishioka
正憲 西岡
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Nissan Chemical Corp
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Nissan Chemical Corp
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Abstract

<P>PROBLEM TO BE SOLVED: To obtain a new antimicrobial protein and to provide a method for producing the same and a use thereof. <P>SOLUTION: The gene comprises a DNA composed of 288 specific nucleotide sequences obtained from Lactobacillus gasseri JCM1131<SP>T</SP>. The protein comprises a specific amino acid sequence. The recombinant plasmid contains the DNA. The host cell is transformed with the recombinant plasmid. The method for producing the protein comprises culturing the host cell and recovering the protein. The composition comprises the protein as an active ingredient. The composition is especially a reagent for research, a food additive, a preservative, an industrial germicide, an agricultural germicide or a medical antibiotic. <P>COPYRIGHT: (C)2008,JPO&INPIT

Description

本発明は新規な抗菌タンパク質、その製造方法およびその用途に関する。より具体的には、溶原ファージφgaYを保有する乳酸棹菌の1種であるLactobacillus gasseri JCM1131Tから得た遺伝子によりコードされる新規な抗菌タンパク質に関する。 The present invention relates to a novel antibacterial protein, a method for producing the same, and use thereof. More specifically, the present invention relates to a novel antibacterial protein encoded by a gene obtained from Lactobacillus gasseri JCM1131 T, which is a kind of lactobacillus having lysogen phage φgaY.

乳酸棹菌の1種であるLactobacillus gasseri JCM1131Tから新規溶菌酵素であるLysgaYの構造遺伝子を単離した例が報告されている。(例えば、特許文献1)。
LysgaYは、310個のアミノ酸からなるタンパク質であり、ムラミダーゼ族に属し、Lactobacillus属、Staphylococcus属等のグラム陽性菌に対し幅広い溶菌スペクトル
を示すことが示されている。
また、LysgaYのアミノ酸配列及び該タンパク質をコードするDNAの933のヌクレオチド配列も報告されている。
An example in which a structural gene of LysgaY, a novel lytic enzyme, was isolated from Lactobacillus gasseri JCM1131 T, which is a kind of lactobacilli, has been reported. (For example, patent document 1).
LysgaY is a protein consisting of 310 amino acids, belongs to the muramidase family, and has been shown to exhibit a broad lysis spectrum against gram-positive bacteria such as Lactobacillus and Staphylococcus.
The amino acid sequence of LysgaY and the nucleotide sequence of 933 of DNA encoding the protein have also been reported.

LysgaYと他の溶菌酵素との相同性比較および三次元構造予測の結果より、LysgaYの活性ドメインであるN末端領域は、β/α−バレル構造を有することが示唆され、一方、C末端領域は細胞壁認識ドメイン(SH3b)を形成すると推測された。
LysgaYのC末端領域である細胞壁認識ドメイン(SH3b)と類似の細胞壁認識ドメイン(SH3b)をC末端領域に有する他の溶菌酵素、それらの細胞壁に対する結合能に関する文献が、幾つか報告されている(例えば、非特許文献1、非特許文献2、非特許文献3および非特許文献4)。
しかしながら、これらの類似ペプチド領域の抗菌活性に関する報告はなされていない。
特開2006−121993号公報 Lu JZ, Fujiwara T, Komatsuzawa H, Sugai M, Sakon J. Cell wall-targeting domain of glycylglycine endopeptidase distinguishes among peptidoglycan cross-bridges. J. Biol. Chem., 2006, Jan 6;281(1):p.549-58. Low LY, Yang C, Perego M, Osterman A, Liddington RC.Structure and lytic activity of a Bacillus anthracis prophage endolysin. J. Biol. Chem. 2005 Oct 21;280(42):p.35433-9. Donovan, D.M., Foster-Frey, J., Dong, S., Rousseau, G.M., Moineau, S., Pritchard, D.G., The Cell Lysis Activity of the Streptococcus agalactiae Bacteriophage B30 Endolysin Relies on the Cysteine, Histidine-Dependent Amidohydrolase/Peptidase Domain. Appl. Environ. Microbiol. 2006. 72, p.5108-12. Donovan, D.M., Dong, S., Garrett, W., Rousseau, G.M., Moineau, S., Pritchard, D.G., Peptidoglycan hydrolase fusions maintain their parental specificities. Appl. Environ. Microbiol. 2006. 72, p.2988-96.
The results of homology comparison and three-dimensional structure prediction between LysgaY and other lytic enzymes suggest that the N-terminal region, which is the active domain of LysgaY, has a β / α-barrel structure, while the C-terminal region is It was speculated to form a cell wall recognition domain (SH3b).
Several literatures on other lytic enzymes having a cell wall recognition domain (SH3b) similar to the cell wall recognition domain (SH3b), which is the C-terminal region of LysgaY, in the C-terminal region and their ability to bind to the cell wall have been reported ( For example, Non-Patent Document 1, Non-Patent Document 2, Non-Patent Document 3, and Non-Patent Document 4).
However, there has been no report on the antibacterial activity of these similar peptide regions.
JP 2006-121993 A Lu JZ, Fujiwara T, Komatsuzawa H, Sugai M, Sakon J. Cell wall-targeting domain of glycylglycine endopeptidase distinguishes among peptidoglycan cross-bridges.J. Biol. Chem., 2006, Jan 6; 281 (1): p.549 -58. Low LY, Yang C, Perego M, Osterman A, Liddington RC.Structure and lytic activity of a Bacillus anthracis prophage endolysin.J. Biol. Chem. 2005 Oct 21; 280 (42): p.35433-9. Donovan, DM, Foster-Frey, J., Dong, S., Rousseau, GM, Moineau, S., Pritchard, DG, The Cell Lysis Activity of the Streptococcus agalactiae Bacteriophage B30 Endolysin Relies on the Cysteine, Histidine-Dependent Amidohydrolase / Peptidase Domain. Appl. Environ. Microbiol. 2006. 72, p.5108-12. Donovan, DM, Dong, S., Garrett, W., Rousseau, GM, Moineau, S., Pritchard, DG, Peptidoglycan hydrolase fusions maintain their parental specificities.Appl.Environ.Microbiol. 2006. 72, p.2988-96 .

本発明の課題は、新規抗菌タンパク質、その製造方法およびその用途を提供することである。   An object of the present invention is to provide a novel antibacterial protein, a method for producing the same, and a use thereof.

本発明者等は上記課題に鑑み鋭意研究を重ねた結果、乳酸棹菌の1種であるLactobacillus gasseri JCM1131Tから単離された溶菌酵素であるLysgaYの構造遺伝子のC末端の細胞壁認識ドメイン(SH3b)がコードするタンパク質(以後、SH3bgaYと記す。)が、植物病原細菌に対して強く且つ広いスペクトルの抗菌活性を有することを見い
出し、本発明を完成させた。
As a result of intensive studies in view of the above-mentioned problems, the present inventors have found that the C-terminal cell wall recognition domain (SH3b) of the structural gene of LysgaY, a lytic enzyme isolated from Lactobacillus gasseri JCM1131 T, which is a kind of Lactobacillus. The protein encoded by) (hereinafter referred to as SH3bgaY) was found to have strong and broad spectrum antibacterial activity against phytopathogenic bacteria, thereby completing the present invention.

即ち、本発明は以下の1ないし12の観点に関する;
1. 以下のa)ないしd)のいずれか1つのDNAからなる遺伝子;
a)以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列からなるDNA、
b)以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列を含むDNA。
c)前記a)記載のDNAのヌクレオチド配列と相補的なヌクレオチド配列からなる一本鎖DNAとストリンジェントな条件下でハイブリダイズし、抗菌活性を有するタンパク質をコードする領域を含むDNA、
d)前記a)記載のDNAと95%のヌクレオチド配列相同性を示し、抗菌活性を有するタンパク質をコードする領域を含むDNA。
atg tct gtt gca caa tca gca tca gaa aaa aca tgg act gat gta caa ggt atg act tgg cat gaa gaa cat ggt act ttc atc act ggt gga gcg att aat ctt cgc tgg ggc gct aat acg caa agc aca ctg att acc acc tta cca gca ggt tca gaa gtt aaa tac aat gct tgg gct aga gat agt gct ggg cgt gta tgg tta cag caa ccg aga gaa aat ggt aag aat ggc tat tta gtt ggt cgt gtc ggc agt gag ccg tgg gga act ttc aaa taa
2. 以下のa)ないしc)のいずれか1つのタンパク質をコードする遺伝子;
a)以下の配列番号2に表されるアミノ酸配列からなるタンパク質、
b)以下の配列番号2に表されるアミノ酸配列を含むタンパク質、
c)以下の配列番号2に表されるアミノ酸配列において、1個または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、抗菌活性を有するタンパク質。
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
3. 以下のa)ないしd)のいずれか1つのタンパク質;
a)以下の配列番号2に表されるアミノ酸配列からなるタンパク質、
b)以下の配列番号2に表されるアミノ酸配列を含むタンパク質、
c)以下の配列番号2に表されるアミノ酸配列において、1個または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、抗菌活性を有するタンパク質、
d)前記1.記載のDNAによりコードされ、抗菌活性を有するタンパク質。
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
4. 前記1.又は2.記載の遺伝子を含む組換えプラスミド。
5. 発現ベクターであることを特徴とする、前記4.記載の組換えプラスミド。
6. 前記4.または5.に記載の組換えプラスミドで形質転換された宿主細胞。
7. グラム陽性細菌であることを特徴とする、前記6.記載の宿主細胞。
8. 大腸菌、乳酸菌、枯草菌またはブドウ球菌であることを特徴とする、前記6.記載の宿主細胞。
9. 以下の工程1)および2)を含む、前記3.に記載のタンパク質の製造方法;
1)前記6.ないし8.のうちの何れか1つに記載の宿主細胞を、抗菌活性を有するタンパク質の産生が可能な条件下で培養する工程、
2)前記工程1)における培養により得た培養物から、抗菌活性を有するタンパク質を回収する工程。
10. 前記9.記載の製造方法により得られるタンパク質。
11. 前記3.記載のタンパク質を有効成分として含有する組成物。
12. 研究用試薬、食品添加物、防腐剤、工業用殺菌剤、農業用殺菌剤または医療用抗生物質であることを特徴とする、前記11.記載の組成物。
That is, the present invention relates to the following aspects 1 to 12;
1. A gene consisting of the DNA of any one of the following a) to d);
a) DNA comprising the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below,
b) DNA comprising the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below.
c) DNA comprising a region encoding a protein having antibacterial activity, which hybridizes with a single-stranded DNA comprising a nucleotide sequence complementary to the nucleotide sequence of the DNA described in a) above under stringent conditions;
d) DNA comprising a region encoding a protein having 95% nucleotide sequence homology with the DNA described in a) and having antibacterial activity.
atg tct gtt gca caa tca gca tca gaa aaa aca tgg act gat gta caa ggt atg act tgg cat gaa gaa cat ggt act ttc atc act ggt gga gcg att aat ctt cgc tgg ggc gct aat acg caa agc aca accg ctca acc gca ggt tca gaa gtt aaa tac aat gct tgg gct aga gat agt gct ggg cgt gta tgg tta cag caa ccg aga gaa aat ggt aag aat ggc tat tta gtt ggt cgt gtc ggc agt gag ccc tgg gga act ttc aaa
2. A gene encoding any one of the following proteins a) to c);
a) a protein comprising an amino acid sequence represented by SEQ ID NO: 2 below,
b) a protein comprising the amino acid sequence represented by SEQ ID NO: 2 below,
c) A protein having an antibacterial activity, comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence represented by SEQ ID NO: 2 below.
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
3. Any one of the following proteins a) to d);
a) a protein comprising an amino acid sequence represented by SEQ ID NO: 2 below,
b) a protein comprising the amino acid sequence represented by SEQ ID NO: 2 below,
c) a protein having an antibacterial activity, comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence represented by SEQ ID NO: 2 below,
d) 1 above. A protein encoded by the described DNA and having antibacterial activity.
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
4). 1 above. Or 2. A recombinant plasmid comprising the gene described.
5. 4. The expression vector, which is an expression vector. The recombinant plasmid as described.
6). 4. above. Or 5. A host cell transformed with the recombinant plasmid described in 1.
7). 5. The gram-positive bacterium as described above, A host cell as described.
8). 5. The aforementioned 6, characterized in that it is Escherichia coli, lactic acid bacteria, Bacillus subtilis or staphylococci. A host cell as described.
9. 2. including the following steps 1) and 2); A method for producing the protein according to claim 1;
1) said 6. Or 8. Culturing the host cell according to any one of the methods under conditions capable of producing a protein having antibacterial activity;
2) A step of recovering a protein having antibacterial activity from the culture obtained by the culture in the step 1).
10. 9 above. A protein obtained by the production method described.
11. 3 above. A composition comprising the described protein as an active ingredient.
12 10. A reagent for research, a food additive, an antiseptic, an industrial fungicide, an agricultural fungicide, or a medical antibiotic, The composition as described.

本発明によれば、強い抗菌活性及び広い抗菌スペクトルを有する新規なタンパク質が提供される。そして該タンパク質は生命工学分野および医療分野の用途への適用、特に研究用試薬、食品添加物、防腐剤、工業用殺菌剤、農業用殺菌剤、医療用抗生物質等の有効成分として好ましく使用することができる。
本発明の抗菌タンパク質(SH3bgaY)は、加水分解活性を全く有さず、逆に、Lactobacillus gasseri JCM1131Tの自己溶菌及びLysgaYの加水分解活性を阻害するものであった。
従って、SH3bgaYの抗菌活性は、LysgaYの加水分解活性とは全く異なることが明らかとなった。
尚、SH3bgaYの抗菌活性は、Lactobacillus gasseri JCM1131Tの対数増殖期における細胞分裂の最終段階である娘細胞の分離の阻害によるものと考えられるものであった。
According to the present invention, a novel protein having strong antibacterial activity and a broad antibacterial spectrum is provided. The protein is preferably used as an active ingredient for applications in the fields of biotechnology and medicine, particularly for research reagents, food additives, preservatives, industrial fungicides, agricultural fungicides, medical antibiotics, etc. be able to.
The antibacterial protein (SH3bgaY) of the present invention has no hydrolysis activity, and conversely inhibits the autolysis of Lactobacillus gasseri JCM1131 T and the hydrolysis activity of LysgaY.
Therefore, it was revealed that the antibacterial activity of SH3bgaY is completely different from the hydrolysis activity of LysgaY.
The antibacterial activity of SH3bgaY was thought to be due to inhibition of separation of daughter cells, which is the final stage of cell division in the logarithmic growth phase of Lactobacillus gasseri JCM1131 T.

本発明の遺伝子を含むDNA断片は、例えば、SH3bgaYをコードする遺伝子部分を含むDNAが組み込まれた組換えプラスミドを鋳型とし、SH3bgaYをコードする遺伝子が得られるよう設計されたプライマーを用いてPCRを行うことにより得ることができる。SH3bgaYをコードする遺伝子部分を含むDNAは、Lactobacillus gasseri JCM1131Tの菌体DNAを制限酵素Sau3AI等で切断することにより得ることができる。得られたDNAを用い、公知の方法、例えばサンブルック等の方法(Sambrook et al., Molecular Cloning. A Laboratory Manual,2nd ed. Cold Spring Harbor Laboratory,
Cold Spring Harbor, N.Y. (1989))等に従って、前記DNAが組み込まれた組換えプラスミドを作成することができる。PCRに使用するプライマーは、LysgaYをコードする遺伝子のC末端部分と他の溶菌酵素の細胞壁認識ドメイン(SH3b)をコードする遺伝子との相同性から予測して設計することができる。
The DNA fragment containing the gene of the present invention is subjected to PCR using primers designed to obtain a gene encoding SH3bgaY using, for example, a recombinant plasmid containing a DNA containing a gene part encoding SH3bgaY as a template. It can be obtained by doing. DNA containing the gene portion encoding SH3bgaY can be obtained by cleaving the bacterial cell DNA of Lactobacillus gasseri JCM1131 T with a restriction enzyme Sau3AI or the like. Using the obtained DNA, known methods such as the method of Sambrook et al. (Sambrook et al., Molecular Cloning. A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory,
According to Cold Spring Harbor, NY (1989)), a recombinant plasmid incorporating the DNA can be prepared. Primers used for PCR can be designed based on the homology between the C-terminal portion of the gene encoding LysgaY and the gene encoding the cell wall recognition domain (SH3b) of another lytic enzyme.

得られたDNA断片を含む組換えプラスミドを作成し、該組換えプラスミドを宿主細胞に導入して形質転換体を得た後、該形質転換体からタンパク質の誘導発現を行うことにより、約9kDaの分子量のSH3bgaYタンパク質を得ることができる。
得られたSH3bgaYタンパク質の植物病原細菌及び標準菌株に対する抗菌活性を評価したところ、使用した全ての菌株に対して強い抗菌活性を示した。
A recombinant plasmid containing the obtained DNA fragment was prepared, the recombinant plasmid was introduced into a host cell to obtain a transformant, and then a protein was induced from the transformant to induce expression of about 9 kDa. A molecular weight SH3bgaY protein can be obtained.
When the antibacterial activity of the obtained SH3bgaY protein against phytopathogenic bacteria and standard strains was evaluated, it showed strong antibacterial activity against all the strains used.

従って本発明の遺伝子の1つの例は、95個のアミノ酸からなるタンパク質をコードする領域に相当する以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列からなるDNAである。以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列を含むDNAからなる遺伝子も、抗菌活性を示す限り本発明に包含される。   Accordingly, one example of the gene of the present invention is DNA consisting of the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below corresponding to a region encoding a protein consisting of 95 amino acids. A gene comprising a DNA comprising the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below is also included in the present invention as long as it exhibits antibacterial activity.

また、本発明の遺伝子の他の例は、下記する配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列と相補的なヌクレオチド配列からなる一本鎖DNAとストリンジェントな条件下でハイブリダイズし、抗菌活性を有するタンパク質をコードする領域を含むDNAからなるもの、および下記する配列番号1のヌクレオチド番号1から28
8に表されるヌクレオチド配列と95%以上のヌクレオチド配列相同性を示し、抗菌活性を有するタンパク質をコードする領域を含むDNAからなるものが挙げられる。このようなDNAとしては、自然界で発見される変異型DNA、人為的に改変した変異型DNA、異種生物由来の相同DNA等が含まれる。
Another example of the gene of the present invention is a hybrid under stringent conditions with a single-stranded DNA comprising a nucleotide sequence complementary to the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 described below. And a DNA comprising a region encoding a protein having antibacterial activity, and nucleotide numbers 1 to 28 of SEQ ID NO: 1 described below
And those consisting of DNA comprising a region encoding a protein having 95% or more nucleotide sequence homology with the nucleotide sequence represented by 8 and having antibacterial activity. Such DNA includes mutant DNA found in nature, artificially modified mutant DNA, homologous DNA derived from a different organism, and the like.

本発明の遺伝子のさらなる例は、前記95個のアミノ酸に相当する以下の配列番号2に表されるアミノ酸配列からなるタンパク質をコードする遺伝子が挙げられる。下記する配列番号2に表されるアミノ酸配列を含むタンパク質をコードする遺伝子も本発明に包含される。ここで、各アミノ酸に対応するコドンは任意に選択でき、また例えば利用する宿主のコドン使用頻度を考慮して常法に従い決定できる。   Further examples of the gene of the present invention include a gene encoding a protein consisting of the amino acid sequence represented by SEQ ID NO: 2 below corresponding to the 95 amino acids. A gene encoding a protein containing the amino acid sequence represented by SEQ ID NO: 2 below is also encompassed in the present invention. Here, the codon corresponding to each amino acid can be arbitrarily selected, and can be determined according to a conventional method in consideration of the codon usage frequency of the host to be used, for example.

他方、本発明のタンパク質の例としては、以下の配列番号2に表されるアミノ酸配列からなるタンパク質を挙げることができる。以下の配列番号2に表されるアミノ酸配列を含むタンパク質も本発明に包含される。   On the other hand, examples of the protein of the present invention include a protein having an amino acid sequence represented by SEQ ID NO: 2 below. A protein comprising the amino acid sequence represented by SEQ ID NO: 2 below is also encompassed in the present invention.

また、以下の配列番号2に表されるアミノ酸配列において、1個または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなるタンパク質であっても、抗菌活性を有する限り本発明に包含される。ここで数個とは、10個を超えない数であり、好ましくは5個以下である。   Further, in the amino acid sequence represented by SEQ ID NO: 2 below, the present invention can be used even if it is a protein comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added, as long as it has antibacterial activity. Is included. Here, the term “several” means a number not exceeding 10, preferably 5 or less.

ここで、あるDNAが以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列と相補的なヌクレオチド配列からなる一本鎖DNAとハイブリダイズするか否かは、例えば以下の手順により決定できる:先ず、目的とするDNAをランダムプライマー法、ニックトランスレーション法等に従いプローブを用いて標識する。次いで、ハイブリダイゼーションに用いるDNAを公知の方法、例えばニトロセルロース膜やナイロン膜等に吸着させ、加熱あるいは紫外線照射により固相化する。その膜をその後、例えば6×SSC、5%デンハート溶液および0.1%ドデシル硫酸ナトリウム(SDS)を含むプレハイブリダイゼーション溶液に浸漬し、55℃で4時間以上保温する。ここで先に作成した標識プローブを同様のプレハイブリダイゼーション溶液に最終比活性1×106cpm/mLとなるように添加し、60℃で一晩保温する。膜を57℃で5分間洗浄する操作を5回繰り返し、さらに57℃で20分間洗浄後、オートラジオグラフィーを行うことにより、ハイブリダイズしたか否かを判定することができる。   Here, whether or not a certain DNA hybridizes with a single-stranded DNA comprising a nucleotide sequence complementary to the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 is determined by the following procedure, for example. Yes: First, the target DNA is labeled with a probe according to the random primer method, the nick translation method or the like. Next, DNA used for hybridization is adsorbed on a known method, for example, a nitrocellulose membrane or a nylon membrane, and solidified by heating or ultraviolet irradiation. The membrane is then immersed in a prehybridization solution containing, for example, 6 × SSC, 5% Denhardt's solution and 0.1% sodium dodecyl sulfate (SDS) and incubated at 55 ° C. for 4 hours or longer. Here, the previously prepared labeled probe is added to the same prehybridization solution so as to have a final specific activity of 1 × 10 6 cpm / mL, and kept at 60 ° C. overnight. The operation of washing the membrane at 57 ° C. for 5 minutes is repeated 5 times. Further, after washing at 57 ° C. for 20 minutes, autoradiography can be performed to determine whether or not the membrane is hybridized.

ハイブリダイゼーションの条件は前記条件に限定されず、ストリンジェントな条件下であればよい。本発明において、ストリンジェントな条件下でのハイブリダイゼーションとは、5×SSC(0.75M 塩化ナトリウム、0.075M クエン酸ナトリウム)またはこれと同等の塩濃度のハイブリダイゼーション溶液中、37〜42℃の温度条件下、約12時間行い、5×SSCまたはこれと同等の塩濃度の溶液等で必要に応じて予備洗浄を行った後、1×SSCまたはこれと同等の塩濃度の溶液中で洗浄を行うことからなるハイブリダイゼーションを指す。さらに0.1×SSCまたはこれと同等の塩濃度の溶液中で洗浄を行うこともできる。   Hybridization conditions are not limited to the above conditions, and may be stringent conditions. In the present invention, hybridization under stringent conditions refers to 5 × SSC (0.75 M sodium chloride, 0.075 M sodium citrate) or a hybridization solution having a salt concentration equivalent thereto at 37 to 42 ° C. For about 12 hours under the above temperature conditions, pre-wash with 5 × SSC or a solution having a salt concentration equivalent thereto, if necessary, and then washing in a solution with 1 × SSC or a salt concentration equivalent thereto. Refers to hybridization consisting of. Further, the washing can be performed in a solution of 0.1 × SSC or a salt concentration equivalent to this.

また、本発明のタンパク質が抗菌活性を有するか否かは、通常の方法により評価できる。より詳しくは、以下の実施例の何れかに詳述されるのと同じかまたはそれに準じた抗菌活性試験を、アミノ酸の欠失、置換および/または付加により生成した改変タンパク質に対して行うことにより、該改変タンパク質の抗菌活性の有無を決定できる。   Whether or not the protein of the present invention has antibacterial activity can be evaluated by a usual method. More specifically, by performing an antibacterial activity test that is the same as or similar to that detailed in any of the following examples on a modified protein produced by amino acid deletion, substitution and / or addition. The presence or absence of antimicrobial activity of the modified protein can be determined.

また本発明のDNAがベクターに挿入された組換えプラスミドも本発明に包含される。該ベクターとしては、一般に知られている様々なベクターを使用でき、原核細胞用ベクター、真核細胞用ベクター、哺乳動物由来の細胞用ベクター等があるが、これに限定されな
い。このような組換えプラスミドにより、原核生物または真核生物の宿主細胞を形質転換できる。さらに、適当なプロモーター配列および/または形質発現に関わる配列を有するベクターを用いるか、もしくはそのような配列を導入することにより、発現ベクターとすることができ好ましい。
A recombinant plasmid in which the DNA of the present invention is inserted into a vector is also encompassed by the present invention. As the vector, various commonly known vectors can be used, and examples thereof include, but are not limited to, a vector for prokaryotic cells, a vector for eukaryotic cells, a vector for cells derived from mammals, and the like. Such recombinant plasmids can transform prokaryotic or eukaryotic host cells. Furthermore, an expression vector can be preferably obtained by using a vector having an appropriate promoter sequence and / or a sequence involved in expression, or by introducing such a sequence.

本発明の組換えプラスミドを各種細胞に導入することにより得られる宿主細胞も本発明に包含される。該宿主細胞として好ましいのは、グラム陽性細菌、特に大腸菌、乳酸菌、枯草菌、ブドウ球菌等である。   Host cells obtained by introducing the recombinant plasmid of the present invention into various cells are also encompassed by the present invention. Preferred as the host cell are gram positive bacteria, particularly Escherichia coli, lactic acid bacteria, Bacillus subtilis, staphylococci and the like.

本発明のタンパク質は、前記組換えプラスミドにより形質転換した前記宿主細胞を、抗菌活性を有するタンパク質の産生が可能な条件下で培養し、該培養により得た培養物から抗菌活性を有するタンパク質を回収することにより製造できる。宿主細胞の培養方法およびタンパク質の回収方法としては従来一般に知られている方法が使用可能であり、例えば以下の実施例の何れかに詳述されるのと同じかまたはそれに準じた方法により行うことができる。   The protein of the present invention is obtained by culturing the host cell transformed with the recombinant plasmid under conditions capable of producing a protein having antibacterial activity, and recovering the protein having antibacterial activity from the culture obtained by the culture. Can be manufactured. As a method for culturing host cells and a method for recovering proteins, conventionally known methods can be used. For example, the method is the same as or described in detail in any of the following examples. Can do.

本発明はまた、本発明のタンパク質を有効成分として含有してなる組成物に関する。該組成物は、細菌を死滅させることが必要となる様々な用途に適用できる。該用途としては、具体的には、研究用試薬、食品添加物、防腐剤、工業用殺菌剤、農業用殺菌剤、医療用抗生物質等が挙げられる。   The present invention also relates to a composition comprising the protein of the present invention as an active ingredient. The composition can be applied in various applications where it is necessary to kill bacteria. Specific examples of the use include research reagents, food additives, preservatives, industrial fungicides, agricultural fungicides, and medical antibiotics.

以下、本発明を具体的な例を示してさらに詳細に説明するが、本発明はこれらの具体例に限定することを意図しない。   Hereinafter, the present invention will be described in more detail with specific examples, but the present invention is not intended to be limited to these specific examples.

SH3bgaY遺伝子の単離
SH3bgaY遺伝子を含む組換えプラスミドの作成は、特開2006−121993号公報にて記述した組み換えプラスミドp119gaY3を用いて、以下のサンブルック等の方法(Sambrook et al., Molecular Cloning. A Laboratory Manual,2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y. (1989))に従って調製した。
組み換えプラスミドp119gaY3(約0.01μg)を鋳型とし、GY1SH32
Rプライマ(5'-AAAGCTCATATGTCTGTTGCACAATCAGCATCAGAA-3')およびM13FWプライマ(5'-GTTTTCCCAGTCACGACGTTGTA-3')を用い、KOD-Plus-DNA Polymerase(東洋紡社製)を用いて、PCR法により、SH3bgaY遺伝子を含むDNA断片(480bp)を得た。
上記DNA断片をNdeIで完全分解し、473bpのDNA断片を回収、精製した。プラスミドpET15b(5708bpの大腸菌ベクター、Ampr、pT7)をNde
I,BamHIで完全分解した後、得られた線状DNAのBamHIサイトをKlenow fragment(NEW ENGLAND BIOLAB社製)を用いて末端平滑化した。引き続き、該473bpDNA断片と線状プラスミドpET15bを、DNA結合酵素(NEW ENGLAND BIOLAB社製)を用いた16℃、6時間の反応により結合させ、組換えプラスミドpHSHgaY2(6170bp)を得た。
Isolation of SH3bgaY gene A recombinant plasmid containing the SH3bgaY gene was prepared by using the recombinant plasmid p119gaY3 described in Japanese Patent Application Laid-Open No. 2006-121993, using the method of Sambrook et al. (Sambrook et al., Molecular Cloning. A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1989)).
Using the recombinant plasmid p119gaY3 (about 0.01 μg) as a template, GY1SH32
Using R primer (5'-AAAGCTCATATGTCTGTTGCACAATCAGCATCAGAA-3 ') and M13FW primer (5'-GTTTTCCCAGTCACGACGTTGTA-3'), using KOD-Plus-DNA Polymerase (manufactured by Toyobo Co., Ltd.), PCR method, and DNA containing SH3bgaY A fragment (480 bp) was obtained.
The DNA fragment was completely digested with NdeI, and a 473 bp DNA fragment was recovered and purified. Plasmid pET15b (5708 bp E. coli vector, Amp r , pT7) was transformed into Nde
After complete degradation with I and BamHI, the BamHI site of the obtained linear DNA was blunt-ended using Klenow fragment (manufactured by NEW ENGLAND BIOLAB). Subsequently, the 473 bp DNA fragment and the linear plasmid pET15b were ligated by a reaction at 16 ° C. for 6 hours using a DNA binding enzyme (manufactured by NEW ENGLAND BIOLAB) to obtain a recombinant plasmid pHSHgaY2 (6170 bp).

プラスミドpHSHgaY2(6170bp)の塩基配列の確認
組換えプラスミドpHSHgaY2(6170bp)の塩基配列は、Thermo Sequenase
Cy5.5 Dye Terminator Cycle Sequencing Kit (アマシャム社製)を用いてサイクルシー
ケンス反応を行い、Long Read Tower シーケンサ(ベリタス社製)により泳動、解析した。本法によりプラスミドpHSHgaY2の挿入断片(473bp)の全塩基配列を決定したところ、その配列は、鋳型にしたプラスミドp119gaY3並びに実施例1のプラ
イマの配列に一致し、目的のSH3bgaY遺伝子を含む配列であった。プラスミドp119gaY3並びにpHSHgaY2から発現されるタンパク質の領域を表した模式図を図1に示す。プラスミドpHSHgaY2から発現されるSH3bgaYタンパク質は、プラスミドp119gaY3から発現されるlysgaYタンパク質(特開2006−121993号公報)のC末端部分のみを有するものであることが判る。
Confirmation of the base sequence of the plasmid pHSHgaY2 (6170 bp) The base sequence of the recombinant plasmid pHSHgaY2 (6170 bp) is the Thermo Sequenase
A cycle sequence reaction was performed using Cy5.5 Dye Terminator Cycle Sequencing Kit (Amersham), and electrophoresis and analysis were performed using a Long Read Tower sequencer (Veritas). When the entire nucleotide sequence of the inserted fragment (473 bp) of plasmid pHSHgaY2 was determined by this method, the sequence was identical to the sequence of plasmid p119gaY3 used as a template and the primer of Example 1, and was a sequence containing the target SH3bgaY gene. It was. FIG. 1 shows a schematic diagram showing regions of proteins expressed from plasmids p119gaY3 and pHSHgaY2. It can be seen that the SH3bgaY protein expressed from the plasmid pHSHgaY2 has only the C-terminal part of the lysgaY protein expressed from the plasmid p119gaY3 (Japanese Patent Laid-Open No. 2006-121993).

SH3bgaYタンパク質の調製と確認
プラスミドpHSHgaY2を、大腸菌BL21DE3(hsdS、gal〔λcIts857、ind1、Sam7、nin5、lacUV5−T7 gene1〕)にエレクトロポーレーション法により導入した。詳細には、先ず大腸菌BL21DE3をLB(Luria-Bertain)培地を用い、37℃で培養した。一晩(12時間)経過後、培養菌2m
Lを新鮮なLB培地100mLに植え継ぎ、37℃で培養した。菌数が5×108/mL
に達したとき、上記と同様の遠心分離法で集菌した。菌体を滅菌水で3度洗浄し、100μLの蒸留水に懸濁した。該懸濁液に1μLの組換えプラスミドDNA(0.5μg/μL)とPEG6000(10%)を添加した。大腸菌体内への該組換えプラスミドの導入は、ジーンパルサー(登録商標、バイオラッド社製)を用い、電圧1.75kV/cm、静電容量25μF、抵抗600Ωの電気パルス条件を用いたエレクトロポレーション法で行った。電気パルス処理後、LB培地を4倍量加え、37℃で30分間保温し、形質転換体を得た。
得られた形質転換体を100mLのLB培地(アンピシリン30μg/mLを含む)で培養した。対数期中期(濁度0.3)において、培養液中に終濃度0.4mMになるようIPTGを加えて、さらに4時間培養した。その後集菌し、結合緩衝液(50mMTris−HCl、500mMNaCl、20mMイミダゾール、pH7.5)で1回洗浄後、同緩衝液5mLに懸濁した。この懸濁液を、超音波破砕装置(ソニックスアンドマテリアル社製)で、1回あたり30秒づつ、計6回処理した。処理液は、遠心分離法(冷却遠心機、日立製作所製:12000rpm、4℃、10分)により不溶成分を除去した。
この菌体破砕上清を、ニッケルキレートアフィニティーカラム(GEヘルスケア社製、カラム容量1mL)に供した。上記の結合緩衝液で洗浄後、溶出緩衝液(50mMTris−HCl、500mMNaCl、600mMイミダゾール)を、0−100%の範囲で直線濃度勾配をつけて流して溶出した。SH3bgaYタンパク質を含む分画を収集し、精製SH3bgaYとした。引き続き、該精製SH3bgaYを0.05M酢酸buffer( PH=5.0)にて透析処理し、4℃にて保存した。
SH3bgaYタンパク質の大腸菌での誘導発現、および精製経過を、SDS電気泳動(15%ゲル濃度)により分析した結果を図2に示す。レーン1は分子量マーカー、レーン2は誘導前の大腸菌、レーン3はIPTGにより発現誘導した大腸菌、レーン4は、タンパク質発現誘導した大腸菌の、菌体破砕上清、レーン5は精製SH3bgaYタンパク質を示す。この結果から、プラスミドpHSHgaY2により、約9kDaの分子量のSH3bgaYタンパク質が誘導され、ニッケルキレートアフィニティークロマトグラフにより、1段階のカラム操作でSH3bgaYタンパク質が精製できることがわかる。
Preparation and confirmation of SH3bgaY protein Plasmid pHSHgaY2 was introduced into E. coli BL21DE3 (hsdS, gal [λcIts857, ind1, Sam7, nin5, lacUV5-T7 gene1]) by electroporation. Specifically, E. coli BL21DE3 was first cultured at 37 ° C. using LB (Luria-Bertain) medium. After 1 night (12 hours), 2m culture
L was inoculated into 100 mL of fresh LB medium and cultured at 37 ° C. The number of bacteria is 5 × 10 8 / mL
When reaching the above, the cells were collected by the same centrifugation method as described above. The cells were washed 3 times with sterilized water and suspended in 100 μL of distilled water. 1 μL of recombinant plasmid DNA (0.5 μg / μL) and PEG 6000 (10%) were added to the suspension. The recombinant plasmid was introduced into the E. coli body by electroporation using Gene Pulser (registered trademark, manufactured by Bio-Rad Co., Ltd.) using electric pulse conditions of voltage 1.75 kV / cm, capacitance 25 μF, resistance 600Ω. I went by law. After the electric pulse treatment, 4 times the amount of LB medium was added and incubated at 37 ° C. for 30 minutes to obtain a transformant.
The obtained transformant was cultured in 100 mL of LB medium (containing 30 μg / mL of ampicillin). In the middle of the logarithmic phase (turbidity: 0.3), IPTG was added to the culture solution to a final concentration of 0.4 mM, and the cells were further cultured for 4 hours. Thereafter, the cells were collected, washed once with a binding buffer (50 mM Tris-HCl, 500 mM NaCl, 20 mM imidazole, pH 7.5), and suspended in 5 mL of the same buffer. This suspension was treated with an ultrasonic crusher (manufactured by Sonics & Materials Co., Ltd.) for 6 times, 30 seconds per time. Insoluble components were removed from the treatment liquid by a centrifugal method (cooled centrifuge, manufactured by Hitachi, Ltd .: 12000 rpm, 4 ° C., 10 minutes).
The cell disruption supernatant was applied to a nickel chelate affinity column (GE Healthcare, column volume: 1 mL). After washing with the above binding buffer, elution buffer (50 mM Tris-HCl, 500 mM NaCl, 600 mM imidazole) was eluted with a linear concentration gradient in the range of 0-100%. Fractions containing SH3bgaY protein were collected and designated as purified SH3bgaY. Subsequently, the purified SH3bgaY was dialyzed against 0.05M acetic acid buffer (PH = 5.0) and stored at 4 ° C.
FIG. 2 shows the results of analyzing the inducible expression of SH3bgaY protein in E. coli and the purification process by SDS electrophoresis (15% gel concentration). Lane 1 is a molecular weight marker, lane 2 is E. coli before induction, lane 3 is E. coli induced by IPTG, lane 4 is E. coli induced protein expression, cell disruption supernatant, and lane 5 is purified SH3bgaY protein. From this result, it is understood that the SH3bgaY protein having a molecular weight of about 9 kDa is induced by the plasmid pHSHgaY2, and the SH3bgaY protein can be purified by a one-step column operation by the nickel chelate affinity chromatography.

SH3bgaYタンパク質の抗菌活性評価
SH3bgaYタンパク質の植物病原細菌及び標準菌株に対する抗菌活性を評価した。下記の供試菌株をCSM培地(YEAST NITROGEN BASE (DIFCO No.233520) 0.85 g、CSM (BIO 101 No.4500-022) 0.31 g、D-glucose 10g/ 0.1 Mリン酸buffer (pH 5.0) )10mLにて25℃3日間培養し、培養菌液を得た。本菌液をCSM培地で100倍希釈した後、9
6穴タイタープレート(ヌンク社製)に180μL/ウェルずつ分注し、さらに0.05M酢
酸buffer( PH=5.0) にて所定の濃度となる様希釈した試験サンプルを20μL/ウェルずつ分注した。本プレートを25℃にてインキュベートし、4日後の供試菌株の生育を目
視にて調査してサンプル無添加処理区と比較することにより生育阻害率を算出した。
Ecc:Erwinia carotovora subsp.carotovora (MAFF301052)
Bg:Burkholderia glumae (MAFF301169)
Rs:Ralstonia solanacearum (MAFF301485)
Xc:Xanthomonas campestris pv.citri (MAFF301078)
Bs:Bacillus subtilis (PCI-219)
Sa:Staphylococcus aureus (IFO-12732)
生育阻害率(%)を表1に示した。
表1に示す試験結果から明らかなように、本発明のタンパク質であるSH3bgaYは6種全ての菌株に対して抗菌活性を示した。特に、Burkholderia glumae、Ralstonia solanacearumに対しては、陽性対照であるクロラムフェニコールよりも強い抗菌活性を示し
た。これらの結果より、SH3bgaYが広い抗菌スペクトルを有することを確認できた。
SH3bgaYは、LysgaYと全く異なり、加水分解活性を全く示さなかった。
そして、逆に、Lactobacillus gasseri JCM1131Tの自己溶菌及びLysgaYの加水分解活性を阻害した。
従って、SH3bgaYの抗菌活性は、LysgaYの加水分解活性とは全く異なるものであった。
尚、SH3bgaYは、Lactobacillus gasseri JCM1131Tの対数増殖期における細胞分裂の最終段階である娘細胞の分離を顕著に阻害した。
Evaluation of antibacterial activity of SH3bgaY protein The antibacterial activity of SH3bgaY protein against phytopathogenic bacteria and standard strains was evaluated. 10 mL of CSM medium (YEAST NITROGEN BASE (DIFCO No.233520) 0.85 g, CSM (BIO 101 No.4500-022) 0.31 g, D-glucose 10 g / 0.1 M phosphate buffer (pH 5.0)) And cultured at 25 ° C. for 3 days to obtain a cultured bacterial solution. After diluting this bacterial solution 100 times with CSM medium,
A 6-well titer plate (manufactured by NUNK) was dispensed at 180 μL / well, and a test sample diluted to a predetermined concentration with 0.05 M acetic acid buffer (PH = 5.0) was dispensed at 20 μL / well. The plate was incubated at 25 ° C., the growth of the test strain after 4 days was visually examined, and the growth inhibition rate was calculated by comparing with the sample-free treatment group.
Ecc: Erwinia carotovora subsp.carotovora (MAFF301052)
Bg: Burkholderia glumae (MAFF301169)
Rs: Ralstonia solanacearum (MAFF301485)
Xc: Xanthomonas campestris pv.citri (MAFF301078)
Bs: Bacillus subtilis (PCI-219)
Sa: Staphylococcus aureus (IFO-12732)
The growth inhibition rate (%) is shown in Table 1.
As is clear from the test results shown in Table 1, SH3bgaY, which is a protein of the present invention, exhibited antibacterial activity against all six strains. In particular, Burkholderia glumae and Ralstonia solanacearum exhibited stronger antibacterial activity than the positive control chloramphenicol. From these results, it was confirmed that SH3bgaY has a broad antibacterial spectrum.
SH3bgaY was completely different from LysgaY and did not show any hydrolytic activity.
And conversely, the autolysis of Lactobacillus gasseri JCM1131 T and the hydrolysis activity of LysgaY were inhibited.
Therefore, the antibacterial activity of SH3bgaY was completely different from the hydrolysis activity of LysgaY.
SH3bgaY markedly inhibited the separation of daughter cells, which is the final stage of cell division in the logarithmic growth phase of Lactobacillus gasseri JCM1131 T.

図1は、実施例2において作成したプラスミドから発現されるタンパク質の領域を表す。FIG. 1 shows a region of a protein expressed from the plasmid prepared in Example 2. 図2は、実施例3において形質転換大腸菌が産生したタンパク質を精製した際の電気泳動結果の写真を表す。レーン1は分子量マーカー、レーン2は誘導前の大腸菌、レーン3はIPTGにより発現誘導した大腸菌、レーン4は、タンパク質発現誘導した大腸菌の、菌体破砕上清、レーン5は精製SH3bgaYタンパク質を表す。FIG. 2 shows a photograph of the electrophoresis results when the protein produced by transformed Escherichia coli in Example 3 was purified. Lane 1 is a molecular weight marker, lane 2 is E. coli before induction, lane 3 is E. coli induced by IPTG, lane 4 is E. coli induced protein expression, cell disruption supernatant, and lane 5 is purified SH3bgaY protein.

Claims (12)

以下のa)ないしd)のいずれか1つのDNAからなる遺伝子;
a)以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列からなるDNA、
b)以下の配列番号1のヌクレオチド番号1から288に表されるヌクレオチド配列を含むDNA。
c)前記a)記載のDNAのヌクレオチド配列と相補的なヌクレオチド配列からなる一本鎖DNAとストリンジェントな条件下でハイブリダイズし、抗菌活性を有するタンパク質をコードする領域を含むDNA、
d)前記a)記載のDNAと95%のヌクレオチド配列相同性を示し、抗菌活性を有するタンパク質をコードする領域を含むDNA。
atg tct gtt gca caa tca gca tca gaa aaa aca tgg act gat gta caa ggt atg act tgg cat gaa gaa cat ggt act ttc atc act ggt gga gcg att aat ctt cgc tgg ggc gct aat acg caa agc aca ctg att acc acc tta cca gca ggt tca gaa gtt aaa tac aat gct tgg gct aga gat agt gct ggg cgt gta tgg tta cag caa ccg aga gaa aat ggt aag aat ggc tat tta gtt ggt cgt gtc ggc agt gag ccg tgg gga act ttc aaa taa
A gene consisting of the DNA of any one of the following a) to d);
a) DNA comprising the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below,
b) DNA comprising the nucleotide sequence represented by nucleotide numbers 1 to 288 of SEQ ID NO: 1 below.
c) DNA comprising a region encoding a protein having antibacterial activity, which hybridizes with a single-stranded DNA comprising a nucleotide sequence complementary to the nucleotide sequence of the DNA described in a) above under stringent conditions;
d) DNA comprising a region encoding a protein having 95% nucleotide sequence homology with the DNA described in a) and having antibacterial activity.
atg tct gtt gca caa tca gca tca gaa aaa aca tgg act gat gta caa ggt atg act tgg cat gaa gaa cat ggt act ttc atc act ggt gga gcg att aat ctt cgc tgg ggc gct aat acg caa agc aca accg ctca acc gca ggt tca gaa gtt aaa tac aat gct tgg gct aga gat agt gct ggg cgt gta tgg tta cag caa ccg aga gaa aat ggt aag aat ggc tat tta gtt ggt cgt gtc ggc agt gag ccc tgg gga act ttc aaa
以下のa)ないしc)のいずれか1つのタンパク質をコードする遺伝子;
a)以下の配列番号2に表されるアミノ酸配列からなるタンパク質、
b)以下の配列番号2に表されるアミノ酸配列を含むタンパク質、
c)以下の配列番号2に表されるアミノ酸配列において、1個または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、抗菌活性を有するタンパク質。
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
A gene encoding any one of the following proteins a) to c);
a) a protein comprising an amino acid sequence represented by SEQ ID NO: 2 below,
b) a protein comprising the amino acid sequence represented by SEQ ID NO: 2 below,
c) A protein having an antibacterial activity, comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence represented by SEQ ID NO: 2 below.
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
以下のa)ないしd)のいずれか1つのタンパク質;
a)以下の配列番号2に表されるアミノ酸配列からなるタンパク質、
b)以下の配列番号2に表されるアミノ酸配列を含むタンパク質、
c)以下の配列番号2に表されるアミノ酸配列において、1個または数個のアミノ酸が欠失、置換および/または付加されたアミノ酸配列からなり、抗菌活性を有するタンパク質、
d)請求項1記載のDNAによりコードされ、抗菌活性を有するタンパク質。
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
Any one of the following proteins a) to d);
a) a protein comprising an amino acid sequence represented by SEQ ID NO: 2 below,
b) a protein comprising the amino acid sequence represented by SEQ ID NO: 2 below,
c) a protein having an antibacterial activity, comprising an amino acid sequence in which one or several amino acids are deleted, substituted and / or added in the amino acid sequence represented by SEQ ID NO: 2 below,
d) A protein encoded by the DNA of claim 1 and having antibacterial activity.
Met Ser Val Ala Gln Ser Ala Ser Glu Lys Thr Trp Thr Asp Val Gln Gly Met Thr Trp His Glu Glu His Gly Thr Phe Ile Thr Gly Gly Ala Ile Asn Leu Arg Trp Gly Ala Asn Thr Gln Ser Thr Leu Ile Thr Thr Leu Pro Ala Gly Ser Glu Val Lys Tyr Asn Ala Trp Ala Arg Asp Ser Ala Gly Arg Val Trp Leu Gln Gln Pro Arg Glu Asn Gly Lys Asn Gly Tyr Leu Val Gly Arg Val Gly Ser Glu Pro Trp Gly Thr Phe Lys
請求項1又は2記載の遺伝子を含む組換えプラスミド。 A recombinant plasmid comprising the gene according to claim 1 or 2. 発現ベクターであることを特徴とする、請求項4記載の組換えプラスミド。 The recombinant plasmid according to claim 4, which is an expression vector. 請求項4または5に記載の組換えプラスミドで形質転換された宿主細胞。 A host cell transformed with the recombinant plasmid according to claim 4 or 5. グラム陽性細菌であることを特徴とする、請求項6記載の宿主細胞。 The host cell according to claim 6, which is a gram positive bacterium. 大腸菌、乳酸菌、枯草菌またはブドウ球菌であることを特徴とする、請求項6記載の宿主細胞。 The host cell according to claim 6, which is Escherichia coli, lactic acid bacteria, Bacillus subtilis or staphylococci. 以下の工程1)および2)を含む、請求項3に記載のタンパク質の製造方法;
1)請求項6ないし8のうちの何れか1項に記載の宿主細胞を、抗菌活性を有するタンパク質の産生が可能な条件下で培養する工程、
2)前記工程1)における培養により得た培養物から、抗菌活性を有するタンパク質を回収する工程。
The method for producing a protein according to claim 3, comprising the following steps 1) and 2):
1) a step of culturing the host cell according to any one of claims 6 to 8 under conditions capable of producing a protein having antibacterial activity;
2) A step of recovering a protein having antibacterial activity from the culture obtained by the culture in the step 1).
請求項9記載の製造方法により得られるタンパク質。 A protein obtained by the production method according to claim 9. 請求項3記載のタンパク質を有効成分として含有する組成物。 A composition comprising the protein according to claim 3 as an active ingredient. 研究用試薬、食品添加物、防腐剤、工業用殺菌剤、農業用殺菌剤または医療用抗生物質であることを特徴とする、請求項11記載の組成物。 12. Composition according to claim 11, characterized in that it is a research reagent, food additive, preservative, industrial fungicide, agricultural fungicide or medical antibiotic.
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2014503469A (en) * 2010-10-12 2014-02-13 コンスモ エム ヴェルデ ビオテクノロジア ダス プランタス ソシエダット アノニマ Antimicrobial protein

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2014503469A (en) * 2010-10-12 2014-02-13 コンスモ エム ヴェルデ ビオテクノロジア ダス プランタス ソシエダット アノニマ Antimicrobial protein

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