CN118730963A - Intelligent control system of three-dimensional platform for THz spectrum detection of tumor tissue slices - Google Patents
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Abstract
本发明提供了一种适用于肿瘤组织切片THz光谱检测的三维平台智能控制系统,其中校正系数获取模块用于根据预设的组织切片进行探测扫描,并根据探测扫描的结果确定校正系数;定位扫描模块用于对切片组织玻片进行定位扫描,得到切片组织玻片的初始位置信息;逐点扫描模块用于根据初始位置信息和校正系数控制电机结构的工作状态,以逐点移动切片组织玻片;图像预处理模块用于对切片组织图像进行平滑去噪,得到去噪图像;三维模型重建模块用于根据去噪图像进行三维重建,得到三维数据模型;肿瘤预测模块用于根据三维数据模型进行肿瘤判断,得到检测结果。本发明能够实现肿瘤边界识别及三维重建,提高检测的准确性,并为肿瘤切除方案提供理论依据。
The present invention provides a three-dimensional platform intelligent control system suitable for THz spectrum detection of tumor tissue slices, wherein the correction coefficient acquisition module is used to perform detection scanning according to preset tissue slices, and determine the correction coefficient according to the result of the detection scanning; the positioning scanning module is used to perform positioning scanning on the slice tissue slide to obtain the initial position information of the slice tissue slide; the point-by-point scanning module is used to control the working state of the motor structure according to the initial position information and the correction coefficient to move the slice tissue slide point by point; the image preprocessing module is used to smooth and denoise the slice tissue image to obtain a denoised image; the three-dimensional model reconstruction module is used to perform three-dimensional reconstruction according to the denoised image to obtain a three-dimensional data model; the tumor prediction module is used to perform tumor judgment according to the three-dimensional data model to obtain the detection result. The present invention can realize tumor boundary recognition and three-dimensional reconstruction, improve the accuracy of detection, and provide a theoretical basis for tumor resection schemes.
Description
技术领域Technical Field
本发明涉及医学检测技术领域,特别是涉及一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统。The invention relates to the technical field of medical detection, and in particular to an intelligent control system of a three-dimensional platform for THz spectrum detection of tumor tissue slices.
背景技术Background Art
脑胶质瘤处于高度异质性和跨细胞状态,其与周围微环境成分之间的通讯会影响胶质瘤各种标志物表达,并通过微环境改变非肿瘤星形胶质细胞表型。随着分子病理学发展,发现不同分子分型(如IDH突变和野生型)胶质瘤具有显著差异的治疗响应性和最终预后。然而在当前诊疗过程中(特别是初次手术时),未将分子病理研究成果及时应用于诊疗过程,实现差异化手术策略,指导术中放化疗和术后超早期化疗;其核心原因是在术中无法实时或准实时的获知含有位置信息的分子病理结果。THz波的快速响应克服了由于肿瘤内部空间异质性所导致取样偏差,有望实现术中无损无标记动态识别肿瘤分子分型空间分布,从而据此早期开展针对分子分型的精准治疗。Gliomas are in a highly heterogeneous and transcellular state. Their communication with the surrounding microenvironmental components will affect the expression of various glioma markers and change the phenotype of non-tumor astrocytes through the microenvironment. With the development of molecular pathology, it has been found that gliomas with different molecular classifications (such as IDH mutations and wild-type) have significantly different treatment responsiveness and final prognosis. However, in the current diagnosis and treatment process (especially during the first surgery), the results of molecular pathology research have not been applied to the diagnosis and treatment process in a timely manner to achieve differentiated surgical strategies and guide intraoperative chemoradiotherapy and ultra-early postoperative chemotherapy; the core reason is that it is impossible to obtain molecular pathology results containing position information in real time or quasi-real time during surgery. The rapid response of THz waves overcomes the sampling bias caused by the spatial heterogeneity of the tumor, and is expected to achieve non-destructive and label-free dynamic identification of the spatial distribution of tumor molecular classifications during surgery, so as to carry out precise treatment for molecular classification at an early stage.
现行太赫兹光谱系统(TAS7500SP)是由光纤激光器模块和数据采集模块组成的太赫兹(THz)分析系统,THz照射到生物组织样品上,并与待测组织相互作用。随后,携带样本信息的太赫兹波被光电导探测器收集并传输到计算机数据分析模块。该系统因集成式、操作简单等优势备受临床科研工作者喜爱,的那由于现有模块由于新鲜组织具有肿瘤最完整信息,固定、脱水、包埋等程序繁琐且损害肿瘤部分分子结构信息;但新鲜组织切片易受损,不能移动等问题。The current terahertz spectroscopy system (TAS7500SP) is a terahertz (THz) analysis system composed of a fiber laser module and a data acquisition module. THz irradiates biological tissue samples and interacts with the tissue to be tested. Subsequently, the terahertz waves carrying sample information are collected by a photoconductive detector and transmitted to a computer data analysis module. This system is popular among clinical researchers for its advantages such as integration and simple operation. However, the existing modules have the most complete information about tumors in fresh tissues, and the procedures of fixation, dehydration, and embedding are cumbersome and damage the molecular structure information of some tumors; however, fresh tissue slices are easily damaged and cannot be moved.
因此,该系统目前仅可实现组织切片单个光斑点的信息进行采集,亟需寻求一种可实现生物组织切片快速逐点扫描模块,以实现组织内部空间异质性信息采集及分析。Therefore, the system can currently only collect information on a single light spot in a tissue slice, and there is an urgent need to find a module that can quickly scan biological tissue slices point by point to achieve information collection and analysis of spatial heterogeneity within the tissue.
发明内容Summary of the invention
为了克服现有技术的不足,本发明的目的是提供一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统。In order to overcome the deficiencies of the prior art, the object of the present invention is to provide an intelligent control system for a three-dimensional platform for THz spectrum detection of tumor tissue slices.
为实现上述目的,本发明提供了如下方案:To achieve the above object, the present invention provides the following solutions:
一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统,所述三维平台包括可移动台面、电机结构和探测仪;所述可移动台面上设置有待检测的切片组织玻片;所述电机结构用于控制所述可移动台面进行移动,以实现所述探测仪对所述切片组织玻片的检测,所述智能控制系统包括:An intelligent control system for a three-dimensional platform for THz spectrum detection of tumor tissue slices, the three-dimensional platform comprising a movable table, a motor structure and a detector; a slice tissue slide to be detected is arranged on the movable table; the motor structure is used to control the movable table to move, so as to realize the detection of the slice tissue slide by the detector, and the intelligent control system comprises:
校正系数获取模块,用于根据预设的组织切片进行探测扫描,并根据探测扫描的结果确定校正系数;A correction coefficient acquisition module is used to perform a detection scan according to a preset tissue slice and determine a correction coefficient according to the result of the detection scan;
定位扫描模块,用于对所述切片组织玻片进行定位扫描,得到所述切片组织玻片的初始位置信息;A positioning scanning module, used for performing positioning scanning on the sliced tissue slide to obtain initial position information of the sliced tissue slide;
逐点扫描模块,用于根据所述初始位置信息和所述校正系数控制所述电机结构的工作状态,以逐点移动所述切片组织玻片,得到多个切片组织图像;A point-by-point scanning module, used for controlling the working state of the motor structure according to the initial position information and the correction coefficient, so as to move the slice tissue slide point by point to obtain a plurality of slice tissue images;
图像预处理模块,用于对所述切片组织图像进行平滑去噪,得到去噪图像;An image preprocessing module, used for smoothing and denoising the slice tissue image to obtain a denoised image;
三维模型重建模块,用于根据所述去噪图像进行三维重建,得到三维数据模型;A three-dimensional model reconstruction module, used to perform three-dimensional reconstruction based on the denoised image to obtain a three-dimensional data model;
肿瘤预测模块,用于根据所述三维数据模型进行肿瘤判断,得到检测结果。The tumor prediction module is used to make tumor judgment based on the three-dimensional data model to obtain detection results.
优选地,所述校正系数获取模块包括:Preferably, the correction coefficient acquisition module includes:
样本扫描单元,用于将内置有所述组织切片的玻片放置在所述可移动台面上,并执行一次全面的初始扫描,记录下所述组织切片的每个扫描特征点的理论位置和扫描得到的实际位置;A sample scanning unit, used for placing the glass slide with the tissue slice embedded therein on the movable table, and performing a comprehensive initial scan to record the theoretical position of each scanning feature point of the tissue slice and the actual position obtained by scanning;
校正系数计算单元,用于根据所述理论位置和所述实际位置的偏差,通过最小二乘法或其他优化算法进行计算,得到一组所述校正系数。The correction coefficient calculation unit is used to calculate a set of correction coefficients according to the deviation between the theoretical position and the actual position by using the least square method or other optimization algorithms.
优选地,所述图像预处理模块包括:Preferably, the image preprocessing module includes:
邻域确定单元,用于以所述切片组织图像中的每个像素点为中心取一个邻域;A neighborhood determination unit, used for taking each pixel point in the slice tissue image as the center to obtain a neighborhood;
像素特征值确定单元,用于计算每个像素点在相应邻域中的像素特征值;A pixel feature value determination unit, used to calculate the pixel feature value of each pixel point in the corresponding neighborhood;
平滑模型构建单元,用于根据所述像素特征值构建平滑去噪模型;A smoothing model building unit, used to build a smoothing denoising model according to the pixel feature value;
去噪单元,用于利用所述平滑去噪模型对所述切片组织图像进行去噪,得到所述去噪图像。A denoising unit is used to denoise the slice tissue image using the smoothing denoising model to obtain the denoised image.
优选地,所述平滑去噪模型的公式为:Preferably, the formula of the smoothing denoising model is:
其中,f(x)为所述平滑去噪模型,表示像素点x在相应邻域的梯度值,为以像素点x为中心的邻域的像素均值,u(x)表示像素点x的像素值,umedian(x)表示以像素点x为中心的邻域的像素中值。Wherein, f(x) is the smoothing denoising model, Represents the gradient value of pixel point x in the corresponding neighborhood, is the mean pixel value of the neighborhood centered on pixel point x, u(x) represents the pixel value of pixel point x, and u median (x) represents the median pixel value of the neighborhood centered on pixel point x.
优选地,所述去噪单元包括:Preferably, the denoising unit comprises:
平滑值计算子单元,用于利用所述平滑去噪模型计算每个像素点的平滑值;A smoothing value calculation subunit, used to calculate the smoothing value of each pixel point using the smoothing denoising model;
均值滤波子单元,用于将所有平滑值大于去噪阈值的像素点使用均值滤波法进行去噪,得到所述去噪图像。The mean filter subunit is used to denoise all pixel points whose smoothing values are greater than a denoising threshold using a mean filter method to obtain the denoised image.
优选地,所述三维模型重建模块包括:Preferably, the three-dimensional model reconstruction module includes:
第一特征提取单元,用于根据所述去噪图像进行边缘检测和关键点检测,得到图像特征点;A first feature extraction unit, used for performing edge detection and key point detection according to the denoised image to obtain image feature points;
图像配准单元,用于根据所述图像特征点对所述去噪图像进行图像配准,得到配准图像;An image registration unit, used for performing image registration on the denoised image according to the image feature points to obtain a registered image;
三维重建单元,用于根据所述配准图像进行深度估计和图像重构,得到所述三维数据模型。A three-dimensional reconstruction unit is used to perform depth estimation and image reconstruction according to the registered image to obtain the three-dimensional data model.
优选地,所述肿瘤预测模块包括:Preferably, the tumor prediction module comprises:
第二特征提取单元,用于根据所述三维数据模型进行肿瘤特征提取,得到提取到的特征参数;A second feature extraction unit is used to extract tumor features according to the three-dimensional data model to obtain extracted feature parameters;
比对单元,用于根据预设的肿瘤特征参数模型,对比提取到的特征参数,以判断待检测的切片组织是否为肿瘤组织。The comparison unit is used to compare the extracted characteristic parameters according to a preset tumor characteristic parameter model to determine whether the slice tissue to be detected is tumor tissue.
根据本发明提供的具体实施例,本发明公开了以下技术效果:According to the specific embodiments provided by the present invention, the present invention discloses the following technical effects:
本发明提供了一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统,所述三维平台包括可移动台面、电机结构和探测仪;所述可移动台面上设置有待检测的切片组织玻片;所述电机结构用于控制所述可移动台面进行移动,以实现所述探测仪对所述切片组织玻片的检测,所述智能控制系统包括:校正系数获取模块,用于根据预设的组织切片进行探测扫描,并根据探测扫描的结果确定校正系数;定位扫描模块,用于对所述切片组织玻片进行定位扫描,得到所述切片组织玻片的初始位置信息;逐点扫描模块,用于根据所述初始位置信息和所述校正系数控制所述电机结构的工作状态,以逐点移动所述切片组织玻片,得到多个切片组织图像;图像预处理模块,用于对所述切片组织图像进行平滑去噪,得到去噪图像;三维模型重建模块,用于根据所述去噪图像进行三维重建,得到三维数据模型;肿瘤预测模块,用于根据所述三维数据模型进行肿瘤判断,得到检测结果。本发明能够实现对肿瘤切片的高精度三维检测,不仅提高了检测的准确性和效率,而且能够为后续的肿瘤研究和治疗提供更加详尽的数据支持。The present invention provides an intelligent control system of a three-dimensional platform for THz spectrum detection of tumor tissue slices. The three-dimensional platform comprises a movable table, a motor structure and a detector; a slice tissue slide to be detected is arranged on the movable table; the motor structure is used to control the movable table to move so as to realize the detection of the slice tissue slide by the detector, and the intelligent control system comprises: a correction coefficient acquisition module, which is used to perform detection scanning according to preset tissue slices and determine the correction coefficient according to the result of the detection scanning; a positioning scanning module, which is used to perform positioning scanning on the slice tissue slide to obtain initial position information of the slice tissue slide; a point-by-point scanning module, which is used to control the working state of the motor structure according to the initial position information and the correction coefficient, so as to move the slice tissue slide point by point to obtain multiple slice tissue images; an image preprocessing module, which is used to perform smoothing and denoising on the slice tissue image to obtain a denoised image; a three-dimensional model reconstruction module, which is used to perform three-dimensional reconstruction according to the denoised image to obtain a three-dimensional data model; and a tumor prediction module, which is used to perform tumor judgment according to the three-dimensional data model to obtain a detection result. The present invention can realize high-precision three-dimensional detection of tumor slices, which not only improves the accuracy and efficiency of detection, but also can provide more detailed data support for subsequent tumor research and treatment.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
为了更清楚地说明本发明实施例或现有技术中的技术方案,下面将对实施例中所需要使用的附图作简单地介绍,显而易见地,下面描述中的附图仅仅是本发明的一些实施例,对于本领域普通技术人员来讲,在不付出创造性劳动性的前提下,还可以根据这些附图获得其他的附图。In order to more clearly illustrate the embodiments of the present invention or the technical solutions in the prior art, the drawings required for use in the embodiments will be briefly introduced below. Obviously, the drawings described below are only some embodiments of the present invention. For ordinary technicians in this field, other drawings can be obtained based on these drawings without paying creative labor.
图1为本发明实施例提供的系统结构示意图;FIG1 is a schematic diagram of a system structure provided by an embodiment of the present invention;
图2为本发明实施例提供的盖玻片示意图;FIG2 is a schematic diagram of a cover glass provided in an embodiment of the present invention;
图3为本发明实施例提供的载玻片示意图。FIG. 3 is a schematic diagram of a glass slide provided in an embodiment of the present invention.
具体实施方式DETAILED DESCRIPTION
下面将结合本发明实施例中的附图,对本发明实施例中的技术方案进行清楚、完整地描述,显然,所描述的实施例仅仅是本发明一部分实施例,而不是全部的实施例。基于本发明中的实施例,本领域普通技术人员在没有做出创造性劳动前提下所获得的所有其他实施例,都属于本发明保护的范围。The following will be combined with the drawings in the embodiments of the present invention to clearly and completely describe the technical solutions in the embodiments of the present invention. Obviously, the described embodiments are only part of the embodiments of the present invention, not all of the embodiments. Based on the embodiments of the present invention, all other embodiments obtained by ordinary technicians in this field without creative work are within the scope of protection of the present invention.
本发明的目的是提供一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统,能够实现对肿瘤切片的高精度三维检测,不仅提高了检测的准确性和效率,而且能够为后续的肿瘤研究和治疗提供更加详尽的数据支持。The purpose of the present invention is to provide an intelligent control system for a three-dimensional platform for THz spectrum detection of tumor tissue slices, which can achieve high-precision three-dimensional detection of tumor slices, not only improving the accuracy and efficiency of detection, but also providing more detailed data support for subsequent tumor research and treatment.
为使本发明的上述目的、特征和优点能够更加明显易懂,下面结合附图和具体实施方式对本发明作进一步详细的说明。In order to make the above-mentioned objects, features and advantages of the present invention more obvious and easy to understand, the present invention is further described in detail below with reference to the accompanying drawings and specific embodiments.
图1为本发明实施例提供的系统结构示意图,如图1所示,本发明提供了一种肿瘤组织切片THz光谱检测的三维平台的智能控制系统,所述三维平台包括可移动台面、电机结构和探测仪;所述可移动台面上设置有待检测的切片组织玻片;所述电机结构用于控制所述可移动台面进行移动,以实现所述探测仪对所述切片组织玻片的检测,所述智能控制系统包括:FIG1 is a schematic diagram of the system structure provided by an embodiment of the present invention. As shown in FIG1 , the present invention provides an intelligent control system of a three-dimensional platform for THz spectrum detection of tumor tissue slices, wherein the three-dimensional platform comprises a movable table, a motor structure and a detector; a slice tissue slide to be detected is arranged on the movable table; the motor structure is used to control the movable table to move so as to realize the detection of the slice tissue slide by the detector, and the intelligent control system comprises:
校正系数获取模块,用于根据预设的组织切片进行探测扫描,并根据探测扫描的结果确定校正系数;A correction coefficient acquisition module is used to perform a detection scan according to a preset tissue slice and determine a correction coefficient according to the result of the detection scan;
定位扫描模块,用于对所述切片组织玻片进行定位扫描,得到所述切片组织玻片的初始位置信息;A positioning scanning module, used for performing positioning scanning on the sliced tissue slide to obtain initial position information of the sliced tissue slide;
逐点扫描模块,用于根据所述初始位置信息和所述校正系数控制所述电机结构的工作状态,以逐点移动所述切片组织玻片,得到多个切片组织图像;A point-by-point scanning module, used for controlling the working state of the motor structure according to the initial position information and the correction coefficient, so as to move the slice tissue slide point by point to obtain a plurality of slice tissue images;
图像预处理模块,用于对所述切片组织图像进行平滑去噪,得到去噪图像;An image preprocessing module, used for smoothing and denoising the slice tissue image to obtain a denoised image;
三维模型重建模块,用于根据所述去噪图像进行三维重建,得到三维数据模型;A three-dimensional model reconstruction module, used to perform three-dimensional reconstruction based on the denoised image to obtain a three-dimensional data model;
肿瘤预测模块,用于根据所述三维数据模型进行肿瘤判断,得到检测结果。The tumor prediction module is used to make tumor judgment based on the three-dimensional data model to obtain detection results.
优选地,所述校正系数获取模块包括:Preferably, the correction coefficient acquisition module includes:
样本扫描单元,用于将内置有所述组织切片的玻片放置在所述可移动台面上,并执行一次全面的初始扫描,记录下所述组织切片的每个扫描特征点的理论位置和扫描得到的实际位置;A sample scanning unit, used for placing the glass slide with the tissue slice embedded therein on the movable table, and performing a comprehensive initial scan to record the theoretical position of each scanning feature point of the tissue slice and the actual position obtained by scanning;
校正系数计算单元,用于根据所述理论位置和所述实际位置的偏差,通过最小二乘法或其他优化算法进行计算,得到一组所述校正系数。The correction coefficient calculation unit is used to calculate a set of correction coefficients according to the deviation between the theoretical position and the actual position by using the least square method or other optimization algorithms.
具体的,本实施例中为了实现对肿瘤玻片进行逐点扫描时的空间位置精确调整,我们可以引入一个校正系数的概念,该系数用于调整三维移动平台的位置,以补偿系统的非理想因素(如机械误差、温度变化引起的形变等)。Specifically, in this embodiment, in order to achieve precise adjustment of the spatial position when scanning the tumor slide point by point, we can introduce the concept of a correction coefficient, which is used to adjust the position of the three-dimensional mobile platform to compensate for the non-ideal factors of the system (such as mechanical errors, deformation caused by temperature changes, etc.).
示范性的,本实施例首先选择或制备一组具有已知几何特征的组织切片。这些样本应具有易于识别和测量的特征点,用于后续的校正系数计算。其次将组织切片放置在三维移动平台上,并执行一次全面的初始扫描。记录下每个特征点的理论位置和扫描得到的实际位置。然后根据理论位置和实际位置的偏差,通过最小二乘法或其他优化算法,计算出一个或一组校正系数。本实施例的校正系数将用于调整三维移动平台的移动路径,以减少偏差。Exemplarily, the present embodiment first selects or prepares a group of tissue slices with known geometric features. These samples should have feature points that are easy to identify and measure for subsequent correction coefficient calculations. Secondly, the tissue slices are placed on a three-dimensional mobile platform and a comprehensive initial scan is performed. The theoretical position of each feature point and the actual position obtained by the scan are recorded. Then, based on the deviation between the theoretical position and the actual position, one or a group of correction coefficients are calculated by the least squares method or other optimization algorithms. The correction coefficients of this embodiment will be used to adjust the moving path of the three-dimensional mobile platform to reduce the deviation.
可选地,本步骤中的特征点是组织切片上那些易于识别和精确测量的点,它们在图像处理和分析中被用作参考点,以评估和校正扫描系统的性能。这些点的选择对于后续的校正过程非常关键,因为它们的位置精度直接影响到校正系数的准确性和最终肿瘤玻片扫描的精度。Optionally, the feature points in this step are those points on the tissue slice that are easy to identify and accurately measure, and they are used as reference points in image processing and analysis to evaluate and correct the performance of the scanning system. The selection of these points is critical to the subsequent correction process because their positional accuracy directly affects the accuracy of the correction coefficients and the accuracy of the final tumor slide scan.
进一步地,在开始逐点扫描之前,本实施例将之前计算得到的校正系数应用到移动平台的控制系统中。这样,每次移动时,平台都会根据校正系数自动调整其位置,以补偿可能的误差。控制三维移动平台根据预定的扫描路径和步长,逐点移动肿瘤玻片。对于每个点位,高分辨率扫描仪都会进行图像采集。由于已经应用了校正系数,因此可以保证采集到的图像数据具有较高的空间位置精度。然后收集并记录每个点位的图像数据。通过图像处理和分析软件,可以进一步处理这些数据,如进行后续的三维重建、特征提取等步骤。Furthermore, before starting point-by-point scanning, this embodiment applies the previously calculated correction coefficient to the control system of the mobile platform. In this way, each time the platform moves, it automatically adjusts its position according to the correction coefficient to compensate for possible errors. The three-dimensional mobile platform is controlled to move the tumor slide point by point according to a predetermined scanning path and step length. For each point, a high-resolution scanner will perform image acquisition. Since the correction coefficient has been applied, it can be ensured that the acquired image data has a high spatial position accuracy. Then the image data of each point is collected and recorded. These data can be further processed through image processing and analysis software, such as performing subsequent three-dimensional reconstruction, feature extraction and other steps.
更进一步地,通过对采集的图像数据进行分析,结合校正系数优化后的空间定位精确度,可以更准确地识别和分析肿瘤玻片中的细胞结构和肿瘤特征,从而提高肿瘤检测的准确性和效率。Furthermore, by analyzing the acquired image data and combining it with the spatial positioning accuracy after the correction coefficient is optimized, the cell structure and tumor characteristics in the tumor slide can be more accurately identified and analyzed, thereby improving the accuracy and efficiency of tumor detection.
本实施例中,引入校正系数并应用于三维移动平台的控制系统中,可以显著提高肿瘤玻片逐点扫描过程中的空间位置精确度。这不仅有助于提高肿瘤检测的准确性,还能为后续的研究和分析提供更可靠的数据支持。In this embodiment, the correction coefficient is introduced and applied to the control system of the three-dimensional mobile platform, which can significantly improve the spatial position accuracy of the tumor slide during point-by-point scanning. This not only helps to improve the accuracy of tumor detection, but also provides more reliable data support for subsequent research and analysis.
优选地,所述图像预处理模块包括:Preferably, the image preprocessing module includes:
邻域确定单元,用于以所述切片组织图像中的每个像素点为中心取一个邻域;A neighborhood determination unit, used for taking each pixel point in the slice tissue image as the center to obtain a neighborhood;
像素特征值确定单元,用于计算每个像素点在相应邻域中的像素特征值;A pixel feature value determination unit, used to calculate the pixel feature value of each pixel point in the corresponding neighborhood;
平滑模型构建单元,用于根据所述像素特征值构建平滑去噪模型;A smoothing model building unit, used to build a smoothing denoising model according to the pixel feature value;
去噪单元,用于利用所述平滑去噪模型对所述切片组织图像进行去噪,得到所述去噪图像。A denoising unit is used to denoise the slice tissue image using the smoothing denoising model to obtain the denoised image.
优选地,所述平滑去噪模型的公式为:Preferably, the formula of the smoothing denoising model is:
其中,f(x)为所述平滑去噪模型,表示像素点x在相应邻域的梯度值,为以像素点x为中心的邻域的像素均值,u(x)表示像素点x的像素值,umedian(x)表示以像素点x为中心的邻域的像素中值。Wherein, f(x) is the smoothing denoising model, Represents the gradient value of pixel point x in the corresponding neighborhood, is the mean pixel value of the neighborhood centered on pixel point x, u(x) represents the pixel value of pixel point x, and u median (x) represents the median pixel value of the neighborhood centered on pixel point x.
优选地,所述去噪单元包括:Preferably, the denoising unit comprises:
平滑值计算子单元,用于利用所述平滑去噪模型计算每个像素点的平滑值;A smoothing value calculation subunit, used to calculate the smoothing value of each pixel point using the smoothing denoising model;
均值滤波子单元,用于将所有平滑值大于去噪阈值的像素点使用均值滤波法进行去噪,得到所述去噪图像。The mean filter subunit is used to denoise all pixel points whose smoothing values are greater than a denoising threshold using a mean filter method to obtain the denoised image.
在实际应用中,本发明可根据像素点的平滑值设定去噪阈值,同时将所有在噪声区间的像素点进行均值滤波处理得到中值像素点,再用中值像素点替换在邻域内的所有像素点的值,即可得到去噪后的图像。而原始的滤波算法例如均值滤波算法是对切片组织图像上每个邻域中的像素点进行均值处理的,因此处理过后的图像就会变得模糊,而发明通过利用平滑去噪模型可以找出图像上的噪点,然后对相应的噪点进行均值滤波处理可以在平滑掉图像中的噪声点的同时,最大保持目标图像的原始信息。In practical applications, the present invention can set a denoising threshold according to the smoothing value of the pixel point, and at the same time, perform mean filtering on all the pixels in the noise interval to obtain the median pixel point, and then use the median pixel point to replace the values of all the pixels in the neighborhood, so as to obtain a denoised image. The original filtering algorithm, such as the mean filtering algorithm, performs mean processing on the pixels in each neighborhood on the slice tissue image, so the processed image will become blurred, and the invention can find the noise points on the image by using the smoothing denoising model, and then perform mean filtering on the corresponding noise points, which can smooth out the noise points in the image while maximally maintaining the original information of the target image.
优选地,所述三维模型重建模块包括:Preferably, the three-dimensional model reconstruction module includes:
第一特征提取单元,用于根据所述去噪图像进行边缘检测和关键点检测,得到图像特征点;A first feature extraction unit, used for performing edge detection and key point detection according to the denoised image to obtain image feature points;
图像配准单元,用于根据所述图像特征点对所述去噪图像进行图像配准,得到配准图像;An image registration unit, used for performing image registration on the denoised image according to the image feature points to obtain a registered image;
三维重建单元,用于根据所述配准图像进行深度估计和图像重构,得到所述三维数据模型。A three-dimensional reconstruction unit is used to perform depth estimation and image reconstruction according to the registered image to obtain the three-dimensional data model.
可选地,本实施例在三维重建过程前,还对图像数据进行了对比度增强和归一化处理等预处理过程,通过调整图像的对比度,使得图像中的肿瘤细胞和其他结构更加清晰,通过对图像进行归一化处理,确保所有图像具有相同的亮度和对比度水平。Optionally, before the three-dimensional reconstruction process, this embodiment also performs preprocessing processes such as contrast enhancement and normalization on the image data. By adjusting the contrast of the image, the tumor cells and other structures in the image are made clearer, and by normalizing the image, it is ensured that all images have the same brightness and contrast levels.
进一步地,本实施例通过边缘检测和关键点检测从预处理后的图像中提取有用的特征,其中边缘检测用于识别图像中肿瘤细胞的边缘。而关键点检测则用于找出图像中的关键点,这些点在不同图像之间具有高度的可识别性。Furthermore, this embodiment extracts useful features from the preprocessed image through edge detection and key point detection, wherein edge detection is used to identify the edges of tumor cells in the image, and key point detection is used to find key points in the image, which are highly identifiable between different images.
更进一步地,本实施例将多个视角的图像对齐到同一坐标系中,其具体为将一个图像中检测到的特征点与另一个图像中的相应特征点匹配起来,并计算将一个图像映射到另一个图像所需的变换(例如旋转、平移和缩放)。Furthermore, this embodiment aligns images from multiple perspectives into the same coordinate system, specifically by matching feature points detected in one image with corresponding feature points in another image, and calculating the transformations (such as rotation, translation, and scaling) required to map one image to another.
更进一步地,本实施例利用配准后的图像数据,通过以下步骤生成三维数据模型:Furthermore, this embodiment uses the registered image data to generate a three-dimensional data model through the following steps:
深度估计:基于图像配准结果,估计每个像素点的深度信息。Depth estimation: Based on the image registration results, the depth information of each pixel is estimated.
体素重建:将深度信息转换为体素(三维像素),每个体素代表三维空间中的一个点。Voxel reconstruction: converts depth information into voxels (three-dimensional pixels), each voxel represents a point in three-dimensional space.
表面重构:根据体素模型,重构肿瘤细胞的三维表面。这通常涉及到一些平滑处理,以生成更加真实的三维模型。Surface reconstruction: Based on the voxel model, reconstruct the 3D surface of the tumor cells. This usually involves some smoothing to generate a more realistic 3D model.
通过上述步骤,利用收集到的图像数据对肿瘤切片进行三维重建,形成三维数据模型,可以为医生提供更全面的信息,以便更好地理解肿瘤的特性和进行治疗规划。Through the above steps, the collected image data is used to perform three-dimensional reconstruction of tumor slices to form a three-dimensional data model, which can provide doctors with more comprehensive information to better understand the characteristics of the tumor and plan treatment.
优选地,所述肿瘤预测模块包括:Preferably, the tumor prediction module comprises:
第二特征提取单元,用于根据所述三维数据模型进行肿瘤特征提取,得到提取到的特征参数;A second feature extraction unit is used to extract tumor features according to the three-dimensional data model to obtain extracted feature parameters;
比对单元,用于根据预设的肿瘤特征参数模型,对比提取到的特征参数,以判断待检测的切片组织是否为肿瘤组织。The comparison unit is used to compare the extracted characteristic parameters according to a preset tumor characteristic parameter model to determine whether the slice tissue to be detected is tumor tissue.
具体的,本实施例中判断肿瘤步骤具体为:Specifically, the steps for determining a tumor in this embodiment are as follows:
特征提取:在三维数据模型的基础上,提取肿瘤的特征参数,如体积、形态、边缘特性等。Feature extraction: Based on the three-dimensional data model, extract the characteristic parameters of the tumor, such as volume, morphology, edge characteristics, etc.
肿瘤判断:根据预设的肿瘤特征参数模型,对比分析切片中的三维数据模型,判断其是否为肿瘤组织,以及肿瘤的具体类型和分级。Tumor judgment: Based on the preset tumor characteristic parameter model, the three-dimensional data model in the slice is compared and analyzed to determine whether it is tumor tissue, as well as the specific type and grade of the tumor.
如图2和图3所示,本实施例中的玻片为石英玻片,其尺寸为25.4*76.2*0.5mm。图中黑色矩形方块为1mm宽的矩形凹槽,深度0.5mm,灰色方块为20*40mm的矩形凹槽,凹槽为深度0.1mm。其中灰色区域用于放置组织切片,可满足(50-100um厚度,此厚度经前期测试,适用于此仪器光学检测);黑色凹槽用于涂抹凡士林,经过前期实验及凡士林的一个功效,可避免或减缓组织切片的一个水化。同时可避免检测过程中干涉现象的产生。As shown in Figures 2 and 3, the glass slide in this embodiment is a quartz glass slide, and its size is 25.4*76.2*0.5mm. The black rectangular block in the figure is a rectangular groove with a width of 1mm and a depth of 0.5mm, and the gray block is a rectangular groove with a width of 20*40mm and a depth of 0.1mm. The gray area is used to place tissue slices, which can meet (50-100um thickness, this thickness has been tested in the early stage and is suitable for optical detection of this instrument); the black groove is used to apply vaseline. After the early experiments and the effect of vaseline, the hydration of the tissue slice can be avoided or slowed down. At the same time, the interference phenomenon in the detection process can be avoided.
本发明的有益效果如下:The beneficial effects of the present invention are as follows:
本发明能够实现对肿瘤切片的高精度三维检测,不仅提高了检测的准确性和效率,而且能够为后续的肿瘤研究和治疗提供更加详尽的数据支持。The present invention can realize high-precision three-dimensional detection of tumor slices, which not only improves the accuracy and efficiency of detection, but also can provide more detailed data support for subsequent tumor research and treatment.
本说明书中各个实施例采用递进的方式描述,每个实施例重点说明的都是与其他实施例的不同之处,各个实施例之间相同相似部分互相参见即可。对于实施例公开的系统而言,由于其与实施例公开的方法相对应,所以描述的比较简单,相关之处参见方法部分说明即可。In this specification, each embodiment is described in a progressive manner, and each embodiment focuses on the differences from other embodiments. The same or similar parts between the embodiments can be referred to each other. For the system disclosed in the embodiment, since it corresponds to the method disclosed in the embodiment, the description is relatively simple, and the relevant parts can be referred to the method part.
本文中应用了具体个例对本发明的原理及实施方式进行了阐述,以上实施例的说明只是用于帮助理解本发明的方法及其核心思想;同时,对于本领域的一般技术人员,依据本发明的思想,在具体实施方式及应用范围上均会有改变之处。综上所述,本说明书内容不应理解为对本发明的限制。This article uses specific examples to illustrate the principles and implementation methods of the present invention. The above examples are only used to help understand the method and core ideas of the present invention. At the same time, for those skilled in the art, according to the ideas of the present invention, there will be changes in the specific implementation methods and application scope. In summary, the content of this specification should not be understood as limiting the present invention.
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