CN117430562A - 4-methyl-2-oxo-3, 6-dihydropyrimidine compound and preparation method and application thereof - Google Patents
4-methyl-2-oxo-3, 6-dihydropyrimidine compound and preparation method and application thereof Download PDFInfo
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- CN117430562A CN117430562A CN202311259034.8A CN202311259034A CN117430562A CN 117430562 A CN117430562 A CN 117430562A CN 202311259034 A CN202311259034 A CN 202311259034A CN 117430562 A CN117430562 A CN 117430562A
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- 239000012312 sodium hydride Substances 0.000 description 1
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- 238000005303 weighing Methods 0.000 description 1
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Abstract
Description
技术领域Technical Field
本发明属于医药技术领域。更具体地,涉及一种4-甲基-2-氧代-3,6-二氢嘧啶类化合物及其制备方法和应用。The present invention belongs to the field of medical technology, and more specifically, relates to a 4-methyl-2-oxo-3,6-dihydropyrimidine compound, a preparation method and application thereof.
背景技术Background Art
磷酸二酯酶(phosphodiesterase,PDE)是通过控制环核苷酸水解的速率来调节cAMP和cGMP的细胞水平的酶,是许多疾病的治疗靶点,如肺动脉高压、特发性肺纤维化、阿尔茨海默症、糖尿病以及心功能不全等。PDE在体内广泛分布,其根据蛋白质的序列相似性、酶动力学特征、调节性质、细胞组织分布和药理学性质被分为11个同工酶家族(PDE1~PDE11);而这11个家族在体内又分别有着不同的分布区域,在不同的生理或病理过程其作用。在这11个家族中,PDE1被鉴定为Ca2+钙调素依赖性磷酸二酯酶(CaM-PDE),其被Ca2+钙调素激活并被证明介导钙和环核苷酸信号通路。已知的三个CaM-PDE基因PDE1A、PDE1B和PDE1C均在中枢神经系统组织中表达。其中,PDE1A在全脑表达,海马和小脑CA1和CA3层表达较高,纹状体表达较低,肺和心脏也表达PDE1A;PDE1B主要表达于纹状体、齿状回、嗅束和小脑,其表达与多巴胺能神经支配的脑区有关;虽然PDE1B主要在中枢神经系统中表达,但它可能在心脏中被检测到;PDE1C主要表达于嗅上皮、小脑颗粒细胞和纹状体,但其也在心脏和血管平滑肌中表达。Phosphodiesterase (PDE) is an enzyme that regulates the cellular levels of cAMP and cGMP by controlling the rate of cyclic nucleotide hydrolysis. It is a therapeutic target for many diseases, such as pulmonary hypertension, idiopathic pulmonary fibrosis, Alzheimer's disease, diabetes, and heart failure. PDE is widely distributed in the body and is divided into 11 isozyme families (PDE1 to PDE11) based on protein sequence similarity, enzyme kinetic characteristics, regulatory properties, cell tissue distribution, and pharmacological properties; and these 11 families have different distribution areas in the body and play different roles in different physiological or pathological processes. Among these 11 families, PDE1 was identified as Ca2 + calmodulin-dependent phosphodiesterase (CaM-PDE), which is activated by Ca2 + calmodulin and has been shown to mediate calcium and cyclic nucleotide signaling pathways. The three known CaM-PDE genes PDE1A, PDE1B, and PDE1C are all expressed in central nervous system tissues. Among them, PDE1A is expressed throughout the brain, with higher expression in the CA1 and CA3 layers of the hippocampus and cerebellum and lower expression in the striatum. PDE1A is also expressed in the lungs and heart; PDE1B is mainly expressed in the striatum, dentate gyrus, olfactory tract and cerebellum, and its expression is related to the brain areas innervated by dopaminergic nerves; although PDE1B is mainly expressed in the central nervous system, it may be detected in the heart; PDE1C is mainly expressed in the olfactory epithelium, cerebellar granule cells and striatum, but it is also expressed in the heart and vascular smooth muscle.
已有研究表明,PDE1调节的信号通路的变化和中枢神经系统有所关联,可用于调节精神失常、运动障碍、认知功能和阿尔茨海默症等;也有一些研究表明PDE1与心功能不全有关,可用于调节心衰、心脏重塑和功能障碍等;一些研究表明PDE1与肺、肾脏、血液学、胃肠道、肝脏、生育力、癌症和代谢紊乱等都有所关联。如中国专利申请CN111747960A公开了一种作为PDE1抑制剂取代吡唑[3,4-d]嘧啶类化合物,对肺动脉高压和特发性肺纤维化具有较好的疗效。目前已有疗效显著的PDE抑制剂成功上市,但是目前能上市进行临床治疗的PDE1抑制剂仍有限,迫切需要开发更多的PDE1抑制剂,以供患者选择。Studies have shown that changes in the signaling pathways regulated by PDE1 are associated with the central nervous system and can be used to regulate mental disorders, movement disorders, cognitive function, and Alzheimer's disease; some studies have also shown that PDE1 is related to heart failure and can be used to regulate heart failure, cardiac remodeling, and dysfunction; some studies have shown that PDE1 is associated with the lungs, kidneys, hematology, gastrointestinal tract, liver, fertility, cancer, and metabolic disorders. For example, Chinese patent application CN111747960A discloses a substituted pyrazole [3,4-d] pyrimidine compound as a PDE1 inhibitor, which has good efficacy in treating pulmonary hypertension and idiopathic pulmonary fibrosis. At present, PDE inhibitors with significant efficacy have been successfully marketed, but the number of PDE1 inhibitors that can be marketed for clinical treatment is still limited, and there is an urgent need to develop more PDE1 inhibitors for patients to choose from.
发明内容Summary of the invention
本发明要解决的技术问题是克服现有能上市进行临床治疗的PDE1抑制剂仍有限的缺陷和不足,提供一种4-甲基-2-氧代-3,6-二氢嘧啶类化合物,给患者更多的可选药物。The technical problem to be solved by the present invention is to overcome the defects and shortcomings of the existing PDE1 inhibitors that can be marketed for clinical treatment, and to provide a 4-methyl-2-oxo-3,6-dihydropyrimidine compound to provide patients with more optional drugs.
本发明的目的是提供所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物的制备方法。The purpose of the present invention is to provide a method for preparing the 4-methyl-2-oxo-3,6-dihydropyrimidine compounds.
本发明另一目的是提供所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物的应用。Another object of the present invention is to provide the application of the 4-methyl-2-oxo-3,6-dihydropyrimidine compounds.
本发明上述目的通过以下技术方案实现:The above-mentioned purpose of the present invention is achieved through the following technical solutions:
本发明保护一种4-甲基-2-氧代-3,6-二氢嘧啶类化合物,其特征在于,所述化合物的结构如式(I)或式(Ⅱ)所示:The present invention protects a 4-methyl-2-oxo-3,6-dihydropyrimidine compound, characterized in that the structure of the compound is as shown in formula (I) or formula (II):
其中,R1为取代或非取代苯基、取代或非取代吡啶基、取代或非取代吲唑基、取代或非取代胡椒环基,所述取代的取代基为一个或多个,所述取代苯基、取代吡啶基、取代吲唑基、取代胡椒环基的取代基选自C1~4烷基、取代或非取代C1~4烷氧基、卤代C1~4烷氧基、苯酚基或卤素中的一种或多种,所述取代C1~4烷氧基的取代基为C3~6环烷基;Wherein, R1 is substituted or unsubstituted phenyl, substituted or unsubstituted pyridyl, substituted or unsubstituted indazolyl, substituted or unsubstituted piperonyl, the substituted substituent is one or more, the substituent of the substituted phenyl, substituted pyridyl, substituted indazolyl, substituted piperonyl is selected from one or more of C1-4 alkyl, substituted or unsubstituted C1-4 alkoxy, halogenated C1-4 alkoxy, phenol or halogen, the substituent of the substituted C1-4 alkoxy is C3-6 cycloalkyl;
Q为氧或硫原子;X为氧或硫原子;Y为碳、氧、氮或硫原子,其根据需要与氢原子连接成饱和键;Q is an oxygen or sulfur atom; X is an oxygen or sulfur atom; Y is a carbon, oxygen, nitrogen or sulfur atom, which is connected to a hydrogen atom to form a saturated bond as required;
R2为C3~6环烷基、取代或非取代C1~4烷基,所述取代的取代基为一个或多个,所述取代C1~4烷基的取代基选自苯基或C3~6环烷基; R2 is C3-6 cycloalkyl, substituted or unsubstituted C1-4 alkyl, the substituted substituent is one or more, and the substituent of the substituted C1-4 alkyl is selected from phenyl or C3-6 cycloalkyl;
R3为氢、C1~4烷基、取代苄基或取代C2~4烯基,所述取代的取代基为一个或多个,所述取代苄基或取代C2~4烯基的取代基选自苯基或卤素中的一种或多种; R3 is hydrogen, C1-4 alkyl, substituted benzyl or substituted C2-4 alkenyl, the substituted substituent is one or more, and the substituent of the substituted benzyl or substituted C2-4 alkenyl is selected from one or more of phenyl or halogen;
R4为氢、苯基、取代或非取代C1~4烷基,所述取代的取代基为一个或多个,所述取代C1~4烷基的取代基选自苯基、C3~6环烷基、卤素中的一种或多种。 R4 is hydrogen, phenyl, substituted or unsubstituted C1-4 alkyl, the substituted substituent is one or more, and the substituent of the substituted C1-4 alkyl is selected from one or more of phenyl, C3-6 cycloalkyl, and halogen.
优选地,所述R1为取代或非取代苯基、取代或非取代吡啶基、取代或非取代吲唑基、取代或非取代胡椒环基,所述取代的取代基为一个或多个,所述取代苯基、取代吡啶基、取代吲唑基、取代胡椒环基的取代基选自C1~3烷基、取代或非取代C1~4烷氧基、卤代C1~3烷氧基、苯酚基或卤素中的一种或多种,所述取代C1~4烷氧基的取代基为C3~5环烷基;Preferably, the R1 is a substituted or unsubstituted phenyl, a substituted or unsubstituted pyridyl, a substituted or unsubstituted indazolyl, or a substituted or unsubstituted piperonyl, the substituted substituent is one or more, the substituent of the substituted phenyl, substituted pyridyl, substituted indazolyl, or substituted piperonyl is selected from one or more of C1-3 alkyl, substituted or unsubstituted C1-4 alkoxy, halogenated C1-3 alkoxy, phenol or halogen, and the substituent of the substituted C1-4 alkoxy is C3-5 cycloalkyl ;
R2为环己基或取代或非取代甲基,所述取代的取代基为一个或多个,所述R2取代的取代基选自苯基或C3~6环烷基; R2 is cyclohexyl or substituted or unsubstituted methyl, the substituted substituent is one or more, and the substituent substituted by R2 is selected from phenyl or C3-6 cycloalkyl;
R3为氢、甲基、取代苄基或取代丙烯基,所述取代的取代基为一个或多个,所述取代苄基或取代丙烯基的取代基选自苯基或卤素; R3 is hydrogen, methyl, substituted benzyl or substituted propenyl, the substituted substituent is one or more, the substituent of the substituted benzyl or substituted propenyl is selected from phenyl or halogen;
R4为氢、苯基、取代或非取代C1~3烷基,所述取代的取代基为一个或多个,所述取代C1~3烷基的取代基选自苯基或C3~6环烷基。 R4 is hydrogen, phenyl, substituted or unsubstituted C1-3 alkyl, the substituted substituent is one or more, and the substituent of the substituted C1-3 alkyl is selected from phenyl or C3-6 cycloalkyl.
优选地,所述R1为取代苯基、取代吡啶基、取代吲唑基、非取代胡椒环基,所述取代苯基、取代吡啶基、取代吲唑基的取代基选自甲基、非取代或取代甲氧基、苯酚基或卤素中的一种或多种,所述取代甲氧基的取代基为环丙基;Preferably, the R1 is a substituted phenyl group, a substituted pyridyl group, a substituted indazolyl group, or an unsubstituted piperonyl group, and the substituent of the substituted phenyl group, the substituted pyridyl group, or the substituted indazolyl group is selected from one or more of a methyl group, an unsubstituted or substituted methoxy group, a phenol group, or a halogen group, and the substituent of the substituted methoxy group is a cyclopropyl group;
R2为环己基或取代或非取代甲基,所述取代的取代基为一个或多个,所述取代甲基的取代基选自苯基、环己基或环戊基; R2 is cyclohexyl or substituted or unsubstituted methyl, the substituted substituent is one or more, and the substituent of the substituted methyl is selected from phenyl, cyclohexyl or cyclopentyl;
R4为氢、苯基、取代或非取代C1~3烷基,所述取代的取代基为一个或多个,所述取代C1~3烷基的取代基选自苯基、环己基或环戊基。 R4 is hydrogen, phenyl, substituted or unsubstituted C1-3 alkyl, the substituted substituent is one or more, and the substituent of the substituted C1-3 alkyl is selected from phenyl, cyclohexyl or cyclopentyl.
更优选地,所述R1为3,4-二氟取代苯基、3,4-二甲氧基取代苯基、间甲氧基取代苯基、对甲氧基取代苯基、胡椒环、1-甲基-1H-吲唑基、甲氧基吡啶基、氯代吡啶基、3-环丙基甲氧基-4-二氟甲氧基苯基、3,4-二二氟甲氧基苯基或二苯基醚;More preferably, R1 is 3,4-difluoro-substituted phenyl, 3,4-dimethoxy-substituted phenyl, m-methoxy-substituted phenyl, p-methoxy-substituted phenyl, piperonyl, 1-methyl-1H-indazolyl, methoxypyridyl, chloropyridyl, 3-cyclopropylmethoxy-4-difluoromethoxyphenyl, 3,4-difluoromethoxyphenyl or diphenyl ether;
R2为甲基、环己基、苄基、环己甲基或环戊甲基; R2 is methyl, cyclohexyl, benzyl, cyclohexylmethyl or cyclopentylmethyl;
R3为氢、甲基、丙烯基苯或卤代苄基; R3 is hydrogen, methyl, propenylbenzene or halogenated benzyl;
R4为氢、C1~3烷基、苯基、苄基、环己甲基或环戊甲基。 R4 is hydrogen, C1-3 alkyl, phenyl, benzyl, cyclohexylmethyl or cyclopentylmethyl.
更优选地,所述R1为More preferably, the R 1 is
中的一种; One of the following;
所述R2为The R2 is
中的一种; One of the following;
所述R3为氢、The R 3 is hydrogen,
中的一种; One of the following;
所述R4为:氢、The R4 is: hydrogen,
中的一种。One of them.
进一步地,所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物还包括其药学上可接受的盐、水合物或前药。Furthermore, the 4-methyl-2-oxo-3,6-dihydropyrimidine compound also includes a pharmaceutically acceptable salt, hydrate or prodrug thereof.
本发明还保护所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物的制备方法,合成路线如下:The present invention also protects a method for preparing the 4-methyl-2-oxo-3,6-dihydropyrimidine compound, and the synthetic route is as follows:
具体包括如下步骤:The specific steps include:
S1、将化合物1、化合物2和脲溶于极性有机溶剂,在YB(OTF)3的催化和保护气体氛围条件下,于50~200℃下反应完全,后处理,得到式(I-1)化合物;S1, dissolving compound 1, compound 2 and urea in a polar organic solvent, reacting completely at 50-200° C. under the conditions of YB(OTF) 3 catalysis and protective gas atmosphere, and post-treating to obtain a compound of formula (I-1);
S2、将式(I-1)化合物和化合物3溶于极性有机溶剂,在碱性条件下,于室温下反应完全,后处理,得到(I-2)化合物;S2, dissolving the compound of formula (I-1) and compound 3 in a polar organic solvent, reacting completely at room temperature under alkaline conditions, and post-treating to obtain compound (I-2);
S3、将式(I-1)所述化合物拔氢后和含化合物4的极性有机溶剂溶液混匀,在保护气体氛围条件下,于室温下反应完全,后处理,得到式(II)化合物;S3, extracting hydrogen from the compound of formula (I-1) and mixing it with a polar organic solvent solution containing compound 4, reacting it completely at room temperature under a protective gas atmosphere, and post-treating it to obtain a compound of formula (II);
其中,上述合成路线中,所述A为卤素;R1~R4、X、Y和Q的定义与前述所述一致。Wherein, in the above synthesis route, A is a halogen; the definitions of R 1 to R 4 , X, Y and Q are consistent with those described above.
优选地,步骤S1中,反应完全的温度为71℃。Preferably, in step S1, the temperature at which the reaction is completed is 71°C.
优选地,步骤S1中,化合物1、化合物2和脲的摩尔比为1:1~2:1~2。Preferably, in step S1, the molar ratio of compound 1, compound 2 and urea is 1:1-2:1-2.
更优选地,步骤S1中,化合物1、化合物2和脲的摩尔比为1:1.2:1.2。More preferably, in step S1, the molar ratio of compound 1, compound 2 and urea is 1:1.2:1.2.
进一步地,步骤S1和步骤S3中,所述极性有机溶剂为四氢呋喃、1,4-二氧六环或DMF(二甲基甲酰胺)。Furthermore, in step S1 and step S3, the polar organic solvent is tetrahydrofuran, 1,4-dioxane or DMF (dimethylformamide).
进一步地,步骤S1和S3中,所述保护气体包括氦气、氖气、氩气或氮气。Furthermore, in steps S1 and S3, the protective gas includes helium, neon, argon or nitrogen.
优选地,所述保护气体为氩气。Preferably, the protective gas is argon.
优选地,步骤S1中,所述反应完全的时间为20~30h。随着基团的增大,反应时间会相应延长。Preferably, in step S1, the time required for the reaction to be complete is 20 to 30 hours. As the size of the group increases, the reaction time will be extended accordingly.
详细地,步骤S1~S3中,所述后处理为反应结束后,体系中加入乙酸乙酯和水萃取,水层用乙酸乙酯再次萃取,合并有机层,用盐水洗涤,将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,石油醚/EtOAc,3~5:1)纯化得到式(I-1)、式(I-2)或式(II)化合物。In detail, in steps S1 to S3, the post-treatment is that after the reaction is completed, ethyl acetate and water are added to the system for extraction, the aqueous layer is extracted again with ethyl acetate, the organic layers are combined, and the combined organic extracts are washed with brine. The combined organic extracts are dried over anhydrous sodium sulfate and concentrated to obtain a crude product, which is purified by silica gel column chromatography (petroleum ether/EtOAc, petroleum ether/EtOAc, 3 to 5:1) to obtain a compound of formula (I-1), formula (I-2) or formula (II).
进一步地,步骤S2中,所述极性有机溶剂为N,N-二甲基甲酰胺、N,N-二甲基乙酰胺、THF或1,4-二氧六环。Furthermore, in step S2, the polar organic solvent is N,N-dimethylformamide, N,N-dimethylacetamide, THF or 1,4-dioxane.
优选地,步骤S2中,式(I-1)化合物和化合物3的摩尔比为1:1~1.5。Preferably, in step S2, the molar ratio of the compound of formula (I-1) to compound 3 is 1:1 to 1.5.
优选地,步骤S2中,所述反应完全的时间为10~20h。Preferably, in step S2, the time required for the reaction to be complete is 10 to 20 hours.
优选地,步骤S2中,所述碱性条件使用的碱性试剂为K2CO3、碳酸铯、氢氧化钠。Preferably, in step S2, the alkaline reagent used in the alkaline condition is K 2 CO 3 , cesium carbonate, or sodium hydroxide.
优选地,步骤S3中,所述拔氢试剂为60%氢化钠和四氢呋喃溶液。Preferably, in step S3, the hydrogen extraction reagent is a 60% sodium hydride and tetrahydrofuran solution.
优选地,步骤S3中,式(I-1)化合物和化合物4的摩尔比为1:1~1.5。Preferably, in step S3, the molar ratio of the compound of formula (I-1) to compound 4 is 1:1 to 1.5.
优选地,步骤S3中,所述反应完全的时间为10~20h。Preferably, in step S3, the time required for the reaction to be complete is 10 to 20 hours.
本发明保护所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物在制备PDE1抑制剂中的应用。The present invention protects the use of the 4-methyl-2-oxo-3,6-dihydropyrimidine compound in the preparation of a PDE1 inhibitor.
本发明还保护所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物在制备治疗磷酸二酯酶相关疾病的药物中的应用。The present invention also protects the use of the 4-methyl-2-oxo-3,6-dihydropyrimidine compounds in the preparation of drugs for treating phosphodiesterase-related diseases.
进一步地,所述磷酸二酯酶相关疾病为肝纤维化、肺动脉高压症、特发性肺纤维化症中的任意一种或多种。Furthermore, the phosphodiesterase-related disease is any one or more of liver fibrosis, pulmonary hypertension, and idiopathic pulmonary fibrosis.
本发明具有以下有益效果:The present invention has the following beneficial effects:
本发明提供了一种全新结构的4-甲基-2-氧代-3,6-二氢嘧啶类化合物,经过实验证明,其对磷酸二酯酶一型(PDE1)表现出良好的抑制作用,可用于制备磷酸二酯酶一型抑制剂;同时,利用该化合物作为活性成分制备的药物对肺动脉高压和特发性肺纤维化具有较好的疗效,在制备肺动脉高压和特发性肺纤维化药物中具有重要的药用价值和广泛的应用前景;并且,所述4-甲基-2-氧代-3,6-二氢嘧啶类化合物的制备方法简单,适用于大规模工业生产及应用。The invention provides a 4-methyl-2-oxo-3,6-dihydropyrimidine compound with a completely new structure. Experiments have shown that the 4-methyl-2-oxo-3,6-dihydropyrimidine compound has a good inhibitory effect on phosphodiesterase type 1 (PDE1), and can be used to prepare a phosphodiesterase type 1 inhibitor. At the same time, a drug prepared by using the compound as an active ingredient has a good therapeutic effect on pulmonary hypertension and idiopathic pulmonary fibrosis, and has important medicinal value and broad application prospects in the preparation of drugs for pulmonary hypertension and idiopathic pulmonary fibrosis. In addition, the preparation method of the 4-methyl-2-oxo-3,6-dihydropyrimidine compound is simple, and is suitable for large-scale industrial production and application.
附图说明BRIEF DESCRIPTION OF THE DRAWINGS
图1为H&E染色、Masson染色和α-SMA免疫组织化学方法染色的不同组肝脏切片的代表性图。Figure 1 shows representative images of different groups of liver sections stained by H&E staining, Masson staining, and α-SMA immunohistochemistry.
图2为H&E染色(图2中的a图)、Masson染色(图2中的b图)和α-SMA免疫组织化学方法染色(图2中的c图)的结果量化图(与对照组相比,#p<0.05,FIG2 is a quantitative graph showing the results of H&E staining (a in FIG2 ), Masson staining (b in FIG2 ), and α-SMA immunohistochemical staining (c in FIG2 ) (compared with the control group, #p<0.05,
##p<0.01;与模型组比较,*p<0.05、**p<0.01;数据表示为独立测定数据的平均值±SEM)。##p<0.01; compared with the model group, *p<0.05, **p<0.01; data are expressed as the mean ± SEM of independent determination data).
具体实施方式DETAILED DESCRIPTION
以下结合说明书附图和具体实施例来进一步说明本发明,但实施例并不对本发明做任何形式的限定。除非特别说明,本发明采用的试剂、方法和设备为本技术领域常规试剂、方法和设备。The present invention is further described below in conjunction with the accompanying drawings and specific examples, but the examples do not limit the present invention in any form. Unless otherwise specified, the reagents, methods and equipment used in the present invention are conventional reagents, methods and equipment in the art.
除非特别说明,以下实施例所用试剂和材料均为市购。Unless otherwise specified, the reagents and materials used in the following examples are commercially available.
实施例1化合物(I-1)的制备Example 1 Preparation of Compound (I-1)
所述化合物(I-1)的合成路线如下:The synthetic route of the compound (I-1) is as follows:
具体包括如下步骤:The specific steps include:
将化合物1(2.5mM)、化合物2(2.5mM)和脲(2.5mM)溶于THF(10mL)中,加入YB(OTF)3(0.25mM),惰性气体Ar换气3次以上,71℃加热回流反应25h。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,石油醚/EtOAc,50:1至1:1梯度洗脱)纯化得到化合物(I-1)。Compound 1 (2.5 mM), compound 2 (2.5 mM) and urea (2.5 mM) were dissolved in THF (10 mL), YB (OTF) 3 (0.25 mM) was added, inert gas Ar was purged for more than 3 times, and the mixture was heated under reflux at 71°C for 25 h. Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, the aqueous layer was extracted again with ethyl acetate (20 mL), the organic layers were combined, and washed with brine (3×100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to obtain a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, petroleum ether/EtOAc, 50:1 to 1:1 gradient elution) to obtain compound (I-1).
以化合物17为例,具体包括如下步骤:Taking compound 17 as an example, the specific steps include:
将化合物4-(二氟甲氧基)-3-(环丙基甲氧基)苯甲醛(CAS号为151103-09-2,1.21g,5mM)、化合物cyclohexylmethyl 3-oxobutanoate(0.99g,5mM)和尿素57-13-6(300mg,5mM)溶于THF(20mL)中,加入YB(OTF)3(310mg,0.5mM),惰性气体Ar换气3次以上,71℃加热回流反应21h。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,50:1至1:1梯度洗脱)纯化得到化合物17(1.546g,收率66.6%)。Compound 4-(difluoromethoxy)-3-(cyclopropylmethoxy)benzaldehyde (CAS No. 151103-09-2, 1.21 g, 5 mM), compound cyclohexylmethyl 3-oxobutanoate (0.99 g, 5 mM) and urea 57-13-6 (300 mg, 5 mM) were dissolved in THF (20 mL), and YB(OTF) 3 (310 mg, 0.5 mM) was added. The inert gas Ar was purged for more than 3 times, and the mixture was heated at 71°C for 21 h under reflux. Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, and the aqueous layer was extracted again with ethyl acetate (20 mL), and the organic layers were combined and washed with brine (3×100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to give a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, gradient elution from 50:1 to 1:1) to give compound 17 (1.546 g, yield 66.6%).
实施例2化合物(I-2)的制备Example 2 Preparation of Compound (I-2)
所述化合物(I-2)的合成路线如下:The synthetic route of the compound (I-2) is as follows:
具体包括如下步骤:The specific steps include:
将实施例1所得化合物(I-1)(4mM)和化合物3(4mM)溶于DMF(10mL)中,加入K2CO3(8mM),室温反应过夜。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,3:1)纯化得到化合物(I-2)。Compound (I-1) (4 mM) obtained in Example 1 and compound 3 (4 mM) were dissolved in DMF (10 mL), K 2 CO 3 (8 mM) was added, and the mixture was reacted at room temperature overnight. Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, and the aqueous layer was extracted again with ethyl acetate (20 mL), and the organic layers were combined and washed with brine (3×100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to obtain a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, 3:1) to obtain compound (I-2).
以化合物18为例,具体包括如下步骤:Taking compound 18 as an example, the specific steps include:
将实施例1所得化合物17(50mg,0.108mM)和碘甲烷(15.3mg,0.108mM)溶于DMF(0.27mL)中,加入K2CO3(30mg,0.216mM),室温反应过夜(23h)。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,50:1至2:1梯度洗脱)纯化得到化合物18(23mg,收率30%)。Compound 17 (50 mg, 0.108 mM) obtained in Example 1 and iodomethane (15.3 mg, 0.108 mM) were dissolved in DMF (0.27 mL), K 2 CO 3 (30 mg, 0.216 mM) was added, and the mixture was reacted at room temperature overnight (23 h). Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, and the aqueous layer was extracted again with ethyl acetate (20 mL), and the organic layers were combined and washed with brine (3×100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to give a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, gradient elution from 50:1 to 2:1) to give compound 18 (23 mg, yield 30%).
实施例3化合物(II)的制备Example 3 Preparation of Compound (II)
所述化合物(II)的合成路线如下:The synthetic route of the compound (II) is as follows:
具体包括如下步骤:The specific steps include:
冰浴条件下,将实施例1所得化合物(I-1)(2.5mM)的无水THF溶液(9mL)缓慢滴入惰性气体保护的60%NaH(2.75mM)中,搅拌反应30min至体系没有气泡产生,缓慢滴加化合物4(2.75mM)的无水THF溶液(1mL),转移至室温搅拌反应过夜。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,3:1)纯化得到化合物(II)。Under ice bath conditions, the anhydrous THF solution (9 mL) of compound (I-1) (2.5 mM) obtained in Example 1 was slowly dripped into 60% NaH (2.75 mM) protected by inert gas, and the reaction was stirred for 30 min until no bubbles were generated in the system, and the anhydrous THF solution (1 mL) of compound 4 (2.75 mM) was slowly dripped, and the mixture was transferred to room temperature and stirred for overnight. Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, and the aqueous layer was extracted again with ethyl acetate (20 mL), and the organic layers were combined and washed with brine (3×100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to obtain a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, 3:1) to obtain compound (II).
以化合物26为例,具体包括如下步骤:Taking compound 26 as an example, the specific steps include:
冰浴条件下,将实施例1所得化合物17(1.16g,2.5mM)的无水THF溶液(9mL)缓慢滴入惰性气体保护的60% NaH(150mg,3.75mM)中,搅拌反应30min至体系没有气泡产生,缓慢滴加化合物S-benzyl carbonochloridothioate(710mg,3.8mM)的无水THF溶液(1mL),转移至室温搅拌反应过夜(18h)。体系中加入乙酸乙酯(80mL)和水(100mL)萃取,水层用乙酸乙酯(20mL)再次萃取,合并有机层,用盐水(3×100mL)洗涤。将合并的有机提取物在无水硫酸钠上干燥并浓缩得到粗产物,通过硅胶柱色谱法(石油醚/EtOAc,50:1至3:1梯度洗脱)纯化得到化合物26(912mg,收率79%)。Under ice bath conditions, the anhydrous THF solution (9 mL) of compound 17 (1.16 g, 2.5 mM) obtained in Example 1 was slowly dripped into 60% NaH (150 mg, 3.75 mM) protected by inert gas, and the reaction was stirred for 30 min until no bubbles were generated in the system, and the anhydrous THF solution (1 mL) of compound S-benzyl carbonochloridothioate (710 mg, 3.8 mM) was slowly dripped, and the reaction was transferred to room temperature and stirred overnight (18 h). Ethyl acetate (80 mL) and water (100 mL) were added to the system for extraction, and the aqueous layer was extracted again with ethyl acetate (20 mL), and the organic layers were combined and washed with brine (3 × 100 mL). The combined organic extracts were dried over anhydrous sodium sulfate and concentrated to obtain a crude product, which was purified by silica gel column chromatography (petroleum ether/EtOAc, 50:1 to 3:1 gradient elution) to obtain compound 26 (912 mg, yield 79%).
采用以上方法可以合成制备得到如下式化合物1~39。The above method can be used to synthesize and prepare compounds 1 to 39 of the following formulas.
采用以上方法可以合成制备得到的化合物1~39的核磁数据参见表1。The NMR data of compounds 1 to 39 synthesized by the above method are shown in Table 1.
表1 4-甲基-2-氧代-3,6-二氢嘧啶类化合物1~39的核磁数据Table 1 NMR data of 4-methyl-2-oxo-3,6-dihydropyrimidine compounds 1 to 39
实验例1化合物活性测试和结果Experimental Example 1 Compound Activity Test and Results
以实施例制备所得化合物1~39为测试对象,测定其对磷酸二酯酶1型的IC50(半数抑制浓度)或其单点抑制率。IC50在50000nM以下说明化合物表现出对PDE1的抑制作用,IC50越小,说明化合物的抑制活性越好,IC50在100nM以内,表明具有优异的抑制活性;50%@1000nM表示当化合物浓度为1000nM时其对PDE1C的抑制率为50%,其他单点抑制率的数据表示依此类推。Compounds 1 to 39 prepared in the examples were used as test objects to determine their IC 50 (half-maximal inhibitory concentration) or single-point inhibition rate against phosphodiesterase type 1. An IC 50 below 50000 nM indicates that the compound exhibits an inhibitory effect on PDE1, and the smaller the IC 50 , the better the inhibitory activity of the compound. An IC 50 within 100 nM indicates excellent inhibitory activity; 50% @ 1000 nM indicates that when the compound concentration is 1000 nM, its inhibition rate against PDE1C is 50%, and other single-point inhibition rate data are similar.
测得结果如表2所示。The measured results are shown in Table 2.
表2 4-甲基-2-氧代-3,6-二氢嘧啶类化合物对PDE1C的抑制活性Table 2 Inhibitory activity of 4-methyl-2-oxo-3,6-dihydropyrimidine compounds on PDE1C
由表可见,大部分的化合物对于磷酸二酯酶1型均表现出显著的抑制作用,其中化合物3、4、6、9、12~15、24~27、35、37对磷酸二酯酶1型的抑制作用尤其明显,IC50小于200nM或当化合物浓度为100nM时其对PDE1C的抑制率≥50%;特别是化合物9、10、14、15、26、27的IC50小于25nM,表现出对磷酸二酯酶1型的显著抑制作用。已有研究(DOI:10.1021/acs.jmedchem.0c00711、DOI:10.1021/acs.jmedchem.2c00458)报道PDE1是治疗特发性肺纤维化的潜在靶点,而本申请的化合物对PDE1表现出较好的抑制作用,说明本申请化合物具有制备特发性肺纤维化药物的潜在前景。As can be seen from the table, most of the compounds showed significant inhibitory effects on phosphodiesterase type 1, among which compounds 3, 4, 6, 9, 12-15, 24-27, 35, and 37 showed particularly significant inhibitory effects on phosphodiesterase type 1, with IC 50 less than 200 nM or an inhibition rate of ≥50% on PDE1C when the compound concentration was 100 nM; in particular, compounds 9, 10, 14, 15, 26, and 27 had IC 50 less than 25 nM, showing significant inhibitory effects on phosphodiesterase type 1. Existing studies (DOI: 10.1021/acs.jmedchem.0c00711, DOI: 10.1021/acs.jmedchem.2c00458) reported that PDE1 is a potential target for the treatment of idiopathic pulmonary fibrosis, and the compounds of the present application showed good inhibitory effects on PDE1, indicating that the compounds of the present application have potential prospects for the preparation of idiopathic pulmonary fibrosis drugs.
实验例2化合物26和35对BDL诱导肝纤维化大鼠模型的药效学影响Experimental Example 2 Pharmacodynamic effects of compounds 26 and 35 on BDL-induced liver fibrosis rat model
1、实验材料1. Experimental Materials
所有动物护理和实验方案均符合“实验动物护理和使用指南”(美国国立卫生研究院出版物,1996年修订,第86-23号,马里兰州贝塞斯达),并经中山大学动物研究机构伦理委员会批准(SYSU-IACUC-2022-001792)。从广东维通利华实验动物技术有限公司购买了85只雄性SD大鼠(6-8周龄,体重180至200克)。All animal care and experimental protocols were in accordance with the Guide for the Care and Use of Laboratory Animals (National Institutes of Health publication, revised 1996, No. 86-23, Bethesda, MD) and approved by the Institutional Animal Research Ethics Committee of Sun Yat-sen University (SYSU-IACUC-2022-001792). 85 male SD rats (6-8 weeks old, weighing 180 to 200 g) were purchased from Guangdong Weitong Lihua Laboratory Animal Technology Co., Ltd.
2、实验方法2. Experimental methods
动物分组:将大鼠保持在24±1的温度和60-70%相对湿度下保持24小时光照/黑暗循环(从7:00到和19:00的光照)。习惯化1周后,将动物随机分为对照组(Sham,也称假手术组)、模型组(BDL)、给药组:26组、35组、阳性对照组(PPC作为阳性药,即多烯磷脂酰胆碱),各组编号分别为Sham组、BDL组、BDL-26组、BDL-35组和BDL-PPC组。Animal grouping: Rats were kept at a temperature of 24±1 and a relative humidity of 60-70% with a 24-hour light/dark cycle (light on from 7:00 to 19:00). After one week of habituation, the animals were randomly divided into a control group (Sham, also known as a sham operation group), a model group (BDL), a drug-treated group: 26 groups, 35 groups, and a positive control group (PPC as a positive drug, i.e., polyene phosphatidylcholine), and the group numbers were Sham group, BDL group, BDL-26 group, BDL-35 group, and BDL-PPC group.
处理方式:根据机构准则提供无菌食物和水。这些大鼠用戊巴比妥钠(45mg/kg,Sigma)全身麻醉。游离胆总管,用手术缝合结扎胆管。手术后24小时,假手术组和BDL处理的模型组每天腹腔注射生理盐水溶液,给药组分别每天给予2.5mg/kg的化合物26,2.5mg/kg的化合物35和150mg/kg的PPC。假手术组起到了健康的控制作用,每组小鼠数量≥6。Treatment: Sterile food and water were provided according to institutional guidelines. The rats were anesthetized with sodium pentobarbital (45 mg/kg, Sigma). The common bile duct was freed and the bile duct was ligated with surgical suture. 24 hours after surgery, the sham-operated group and the BDL-treated model group were injected intraperitoneally with normal saline solution every day, and the drug-treated groups were given 2.5 mg/kg of compound 26, 2.5 mg/kg of compound 35 and 150 mg/kg of PPC every day, respectively. The sham-operated group served as a healthy control, and the number of mice in each group was ≥6.
在禁食过夜后,腹主动脉法采血后用戊巴比妥钠(45mg/kg)处死动物。将血清在3000rpm和4℃下离心15分钟,并储存在-80℃冰箱中。对大鼠实施安乐死后收获结扎的左叶;将组织在室温下浸入4%缓冲的多聚甲醛中过夜,然后包埋在石蜡中。将石蜡包埋的组织切片厚度为5μm并安装在载玻片上。肝组织石蜡切片用H&E染色,Masson染色和α-SMA(Servicebio,GB111364)免疫组织化学方法染色,结果如图1所示。使用显微镜在H&E染色中以盲法在1至5级上定量肝坏死和胆管增殖,结果如图2中的a图所示;在低放大倍率(10×物镜,Life Technologies,EVOS FL Auto)下观察所有动物的组织学切片,并使用ImageJ进行分析以计算胶原面积的百分比,结果如图2中的b图所示;在低放大倍率(10×物镜,LifeTechnologies,EVOS FL Auto)下观察所有动物的组织学切片,并使用ImageJ进行分析以计算α-SMA阳性区域面积的百分比,结果如图2中的c图所示。After fasting overnight, the animals were killed with sodium pentobarbital (45 mg/kg) after blood was collected by abdominal aorta method. The serum was centrifuged at 3000 rpm and 4°C for 15 minutes and stored in a -80°C refrigerator. The ligated left lobe was harvested after euthanasia of the rats; the tissue was immersed in 4% buffered paraformaldehyde at room temperature overnight and then embedded in paraffin. The paraffin-embedded tissue sections were sliced to a thickness of 5 μm and mounted on slides. The paraffin sections of the liver tissue were stained with H&E, Masson staining and α-SMA (Servicebio, GB111364) immunohistochemistry, and the results are shown in Figure 1. Liver necrosis and bile duct proliferation were quantified in a blinded manner on a scale of 1 to 5 in H&E staining using a microscope, and the results are shown in Figure 2, Panel a; histological sections of all animals were observed at low magnification (10× objective lens, Life Technologies, EVOS FL Auto) and analyzed using ImageJ to calculate the percentage of collagen area, and the results are shown in Figure 2, Panel b; histological sections of all animals were observed at low magnification (10× objective lens, Life Technologies, EVOS FL Auto) and analyzed using ImageJ to calculate the percentage of α-SMA-positive area, and the results are shown in Figure 2, Panel c.
3、实验结果3. Experimental results
H&E染色,Masson染色和α-SMA免疫组织化学方法染色结果如图1所示,其中,H&E染色结果用于观察肝组织病理情况,Masson染色结果用于观察肝组织胶原沉积的情况;α-SMA免疫组织化学方法染色结果用于观察肝组织α-SMA表达的水平。The results of H&E staining, Masson staining and α-SMA immunohistochemical staining are shown in Figure 1, where the H&E staining results are used to observe the pathological conditions of liver tissue, the Masson staining results are used to observe the collagen deposition in liver tissue; and the α-SMA immunohistochemical staining results are used to observe the expression level of α-SMA in liver tissue.
H&E染色评分结果如图2中的a图所示。结合图1~2可知,与对照组Sham组相比,BDL诱导的大鼠肝脏有明显的胆道增生、纤维组织增生等病理改变,有的甚至出现肝细胞坏死和纤维增生。当给予化合物26和35药物处理后均减轻了肝脏的结构损伤,纤维化病变较少。The H&E staining score results are shown in Figure 2a. Combined with Figures 1 and 2, it can be seen that compared with the control group Sham group, the BDL-induced rat liver had obvious pathological changes such as bile duct hyperplasia and fibrosis, and some even had hepatocyte necrosis and fibrosis. When compound 26 and 35 were treated with drugs, the structural damage of the liver was reduced, and the fibrotic lesions were less.
胶原沉积是肝纤维化的一种病理特征,其表达可以通过Masson染色后的蓝色染色来表示,其量化的结果如图2中的b图所示,结合图1~2可知,与对照组相比,BDL诱导的大鼠肝脏门静脉区周围存在大面积胶原沉积和纤维增生,化合物26和35将胶原蛋白沉积降低到正常水平。Collagen deposition is a pathological feature of liver fibrosis, and its expression can be represented by blue staining after Masson staining. The quantification result is shown in Figure 2b. Combined with Figures 1 and 2, it can be seen that compared with the control group, there is a large area of collagen deposition and fibrosis around the portal vein area of the BDL-induced rat liver. Compounds 26 and 35 reduce collagen deposition to normal levels.
α-平滑肌肌动蛋白(α-SMA)是活性肝星状细胞(HSCs)的主要标志物,采用免疫荧光染色法检测其在各组肝组织中的表达情况,如图2中的c图所示,结合图1~2可知,模型组的α-SMA水平明显高于对照组,化合物26和35显著降低了α-SMA的水平。α-Smooth muscle actin (α-SMA) is the main marker of active hepatic stellate cells (HSCs). Immunofluorescence staining was used to detect its expression in the liver tissues of each group, as shown in Figure 2 c. Combined with Figures 1 and 2, it can be seen that the α-SMA level in the model group was significantly higher than that in the control group, and compounds 26 and 35 significantly reduced the level of α-SMA.
上述实施例为本发明较佳的实施方式,但本发明的实施方式并不受上述实施例的限制,其他的任何未背离本发明的精神实质与原理下所作的改变、修饰、替代、组合、简化,均应为等效的置换方式,都包含在本发明的保护范围之内。The above embodiments are preferred implementation modes of the present invention, but the implementation modes of the present invention are not limited to the above embodiments. Any other changes, modifications, substitutions, combinations, and simplifications that do not deviate from the spirit and principles of the present invention should be equivalent replacement methods and are included in the protection scope of the present invention.
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