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ATE329061T1 - METHOD FOR REDUCING NON-SPECIFIC AMPLIFICATION IN PCR - Google Patents

METHOD FOR REDUCING NON-SPECIFIC AMPLIFICATION IN PCR

Info

Publication number
ATE329061T1
ATE329061T1 AT02802916T AT02802916T ATE329061T1 AT E329061 T1 ATE329061 T1 AT E329061T1 AT 02802916 T AT02802916 T AT 02802916T AT 02802916 T AT02802916 T AT 02802916T AT E329061 T1 ATE329061 T1 AT E329061T1
Authority
AT
Austria
Prior art keywords
sorbitol
specific amplification
dmso
sample
reducing non
Prior art date
Application number
AT02802916T
Other languages
German (de)
Inventor
Ian J Mclaughlin
Sulekha Rao Coticone
Will Bloch
Original Assignee
Applera Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Applera Corp filed Critical Applera Corp
Application granted granted Critical
Publication of ATE329061T1 publication Critical patent/ATE329061T1/en

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/686—Polymerase chain reaction [PCR]

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Amplifiers (AREA)

Abstract

The invention provides methods for reducing non-specific amplification DNA in a polymerase chain reaction comprising providing a sample comprising a target DNA sequence of interest; contacting the sample with at least one enzyme having nucleic acid polymerase activity; and incubating the sample with said enzyme for a time and under conditions sufficient to amplify the target DNA sequence, forming amplified target sequence; wherein the incubation is performed in the presence of an amount of sorbitol, or sorbitol and DMSO effective to reduce the non-specific amplification relative to the amount of non-specific amplification observed in the absence of sorbitol, or sorbitol and DMSO. The methods are suitable for amplification of ribosomal DNA, particularly from clinical samples. Compositions and kits containing sorbitol, or sorbitol and DMSO for reducing non-specific amplification are also provided.
AT02802916T 2001-10-31 2002-07-30 METHOD FOR REDUCING NON-SPECIFIC AMPLIFICATION IN PCR ATE329061T1 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US09/998,887 US6783940B2 (en) 2001-10-31 2001-10-31 Method of reducing non-specific amplification in PCR

Publications (1)

Publication Number Publication Date
ATE329061T1 true ATE329061T1 (en) 2006-06-15

Family

ID=25545644

Family Applications (1)

Application Number Title Priority Date Filing Date
AT02802916T ATE329061T1 (en) 2001-10-31 2002-07-30 METHOD FOR REDUCING NON-SPECIFIC AMPLIFICATION IN PCR

Country Status (8)

Country Link
US (1) US6783940B2 (en)
EP (1) EP1446508B1 (en)
JP (1) JP2005512572A (en)
AT (1) ATE329061T1 (en)
AU (1) AU2002365068A1 (en)
CA (1) CA2464885A1 (en)
DE (1) DE60212175T2 (en)
WO (1) WO2003054209A2 (en)

Families Citing this family (27)

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Publication number Priority date Publication date Assignee Title
US20080085515A1 (en) * 2000-03-24 2008-04-10 Eppendorf Array Technologies Sa (Eat) Identification of multiple biological (micro) organisms by detection of their nucleotide sequences on arrays
US20070298423A1 (en) * 2000-03-24 2007-12-27 Eppendorf Array Technologies Sa (Eat) Identification of multiple biological (micro) organisms by specific amplification and detection of their nucleotide sequences on arrays
US6841349B2 (en) * 2001-05-07 2005-01-11 Applera Corporation Applied Biosystems Group Methods for the reduction of stutter in microsatellite amplification
US7354742B2 (en) * 2002-02-22 2008-04-08 Ortho-Mcneil Pharmaceutical, Inc. Method for generating amplified RNA
EP1403385A1 (en) * 2002-09-27 2004-03-31 Institut National De La Sante Et De La Recherche Medicale (Inserm) Method for assaying replication of HBV and testing susceptibility to drugs
AU2004282593B8 (en) * 2003-10-16 2008-08-28 Third Wave Technologies, Inc. Direct nucleic acid detection in bodily fluids
ATE417938T1 (en) * 2004-01-23 2009-01-15 Bio Merieux Inc NOVEL NUCLEOTIDE MIXTURE FOR AN IMPROVED NUCLEIC ACID AMPLIFICATION PROCESS
ATE452992T1 (en) * 2004-02-04 2010-01-15 Qiagen North American Holdings DUTP-BASED COMPOSITIONS FOR REDUCING PRIMER AGGREGATE FORMATION DURING NUCLEIC ACID AMPLIFICATION
CA2567627C (en) * 2004-05-20 2014-09-30 Quest Diagnostics Investments Incorporated Single label comparative hybridization
WO2006050499A2 (en) * 2004-11-03 2006-05-11 Third Wave Technologies, Inc. Single step detection assay
JP2006262777A (en) * 2005-03-24 2006-10-05 Japan Science & Technology Agency Method for synthesizing nucleic acid using samples containing contaminant, and additive
US20060263811A1 (en) * 2005-05-03 2006-11-23 Geunsook Jeon Materials and kits for use in hot-start PCR, and methods of amplifying nucleic acids in a polymerase chain reaction
US20070048757A1 (en) * 2005-05-31 2007-03-01 Applera Corporation Methods for characterizing cells using amplified micro rnas
JP5150829B2 (en) * 2005-11-25 2013-02-27 株式会社ダナフォーム Nucleic acid detection and amplification method
BRPI0709282B8 (en) 2006-03-29 2021-05-25 Merial Ltd streptococcal vaccine
US7772390B1 (en) 2006-07-18 2010-08-10 The Regents Of The University Of California Lipid mediated nucleic acid synthesis
KR100773561B1 (en) * 2006-11-07 2007-11-05 삼성전자주식회사 Apparatus and method for reducing non-specific amplification in multiplex pcr
US7507539B2 (en) * 2007-07-30 2009-03-24 Quest Diagnostics Investments Incorporated Substractive single label comparative hybridization
KR101419980B1 (en) 2008-03-15 2014-07-15 홀로직, 인크. Compositions and methods for analysis of nucleic acid molecules during amplification reactions
CN102084004B (en) 2008-05-27 2016-01-20 丹麦达科有限公司 Cross combination thing and method
JP2012516155A (en) * 2009-01-27 2012-07-19 キアゲン ゲーザーズバーグ Thermophilic helicase-dependent amplification technique using endpoint homogeneous fluorescence detection
WO2010097656A1 (en) 2009-02-26 2010-09-02 Dako Denmark A/S Compositions and methods for performing a stringent wash step in hybridization applications
EP2761028A1 (en) 2011-09-30 2014-08-06 Dako Denmark A/S Hybridization compositions and methods using formamide
EP2768974B1 (en) 2011-10-21 2017-07-19 Dako Denmark A/S Hybridization compositions and methods
BR112015014271A2 (en) * 2012-12-18 2017-12-12 Asia Pacific Special Nutrients Sdn Bhd high resolution dissociation genotyping of ibv, csfv and ndv
US9630182B2 (en) * 2013-12-04 2017-04-25 Leidos Innovations Technology, Inc. Non-contact infrared thermocycling
JP2020532497A (en) * 2017-08-03 2020-11-12 ザ トラスティーズ オブ コロンビア ユニバーシティ イン ザ シティ オブ ニューヨーク Optical supermultiplexing with polyyne

Family Cites Families (12)

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Publication number Priority date Publication date Assignee Title
US5176995A (en) * 1985-03-28 1993-01-05 Hoffmann-La Roche Inc. Detection of viruses by amplification and hybridization
US5571674A (en) * 1989-09-18 1996-11-05 The Trustees Of Columbia University In The City Of New York DNA oligomers for use in detection of campylobacter pylori and methods of using such DNA oligomers
US5606045A (en) * 1990-05-15 1997-02-25 Diatron Corporation Nucleic acid probes and methods
GB9024005D0 (en) * 1990-11-05 1990-12-19 British Bio Technology Process for amplifying nucleic acid
US5364759B2 (en) 1991-01-31 1999-07-20 Baylor College Medicine Dna typing with short tandem repeat polymorphisms and identification of polymorphic short tandem repeats
DE4411588C1 (en) 1994-03-30 1995-09-28 Deutsches Rheuma Forschungszen Buffer, contg. betaine, for RNA- and DNA-polymerase reactions
US5580728A (en) 1994-06-17 1996-12-03 Perlin; Mark W. Method and system for genotyping
US5545539A (en) 1994-10-18 1996-08-13 Genzyme Corporation Method for nucleotide sequence amplification
US6077664A (en) * 1995-06-07 2000-06-20 Promega Corporation Thermophilic DNA polymerases from Thermotoga neapolitana
US6156512A (en) 1996-05-23 2000-12-05 Promega Corp Allelic ladders for short tandem repeat loci
US6787305B1 (en) 1998-03-13 2004-09-07 Invitrogen Corporation Compositions and methods for enhanced synthesis of nucleic acid molecules
JP4438110B2 (en) * 1998-07-01 2010-03-24 東ソー株式会社 Quantification method of target nucleic acid

Also Published As

Publication number Publication date
WO2003054209A3 (en) 2003-12-04
DE60212175D1 (en) 2006-07-20
AU2002365068A1 (en) 2003-07-09
EP1446508B1 (en) 2006-06-07
CA2464885A1 (en) 2003-07-03
DE60212175T2 (en) 2006-10-12
WO2003054209A2 (en) 2003-07-03
US20030104395A1 (en) 2003-06-05
JP2005512572A (en) 2005-05-12
US6783940B2 (en) 2004-08-31
EP1446508A4 (en) 2005-03-09
EP1446508A2 (en) 2004-08-18

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