[go: up one dir, main page]
More Web Proxy on the site http://driver.im/

Roy et al., 2010 - Google Patents

Universal plant DNA barcode loci may not work in complex groups: a case study with Indian Berberis species

Roy et al., 2010

View HTML
Document ID
16281677644267056600
Author
Roy S
Tyagi A
Shukla V
Kumar A
Singh U
Chaudhary L
Datt B
Bag S
Singh P
Nair N
Husain T
Tuli R
Publication year
Publication venue
PloS one

External Links

Snippet

Background The concept of DNA barcoding for species identification has gained considerable momentum in animals because of fairly successful species identification using cytochrome oxidase I (COI). In plants, matK and rbcL have been proposed as standard …
Continue reading at journals.plos.org (HTML) (other versions)

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES OR MICRO-ORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Hybridisation probes
    • C12Q1/6888Hybridisation probes for detection or identification of organisms
    • C12Q1/6895Hybridisation probes for detection or identification of organisms for plants, fungi, or algae
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES OR MICRO-ORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Hybridisation probes
    • C12Q1/6888Hybridisation probes for detection or identification of organisms
    • C12Q1/689Hybridisation probes for detection or identification of organisms for bacteria
    • GPHYSICS
    • G06COMPUTING; CALCULATING; COUNTING
    • G06FELECTRICAL DIGITAL DATA PROCESSING
    • G06F19/00Digital computing or data processing equipment or methods, specially adapted for specific applications
    • G06F19/10Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology
    • G06F19/22Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for sequence comparison involving nucleotides or amino acids, e.g. homology search, motif or SNP [Single-Nucleotide Polymorphism] discovery or sequence alignment

Similar Documents

Publication Publication Date Title
Roy et al. Universal plant DNA barcode loci may not work in complex groups: a case study with Indian Berberis species
U'Ren et al. Tissue storage and primer selection influence pyrosequencing‐based inferences of diversity and community composition of endolichenic and endophytic fungi
Cho et al. Complete chloroplast genome sequence of tartary buckwheat (Fagopyrum tataricum) and comparative analysis with common buckwheat (F. esculentum)
Parveen et al. DNA barcoding of endangered Indian Paphiopedilum species
Huang et al. Application of DNA barcodes in Asian tropical trees–a case study from Xishuangbanna Nature Reserve, Southwest China
van Poecke et al. Sequence‐based SNP genotyping in durum wheat
Krawczyk et al. Evaluation of 11 single‐locus and seven multilocus DNA barcodes in L amium L.(L amiaceae)
Acquadro et al. Coding SNPs analysis highlights genetic relationships and evolution pattern in eggplant complexes
Chen et al. DNA barcoding in herbal medicine: Retrospective and prospective
Chankaew et al. Detection of genome donor species of neglected tetraploid crop Vigna reflexo-pilosa (creole bean), and genetic structure of diploid species based on newly developed EST-SSR markers from azuki bean (Vigna angularis)
Naderali et al. ‘Candidatus Phytoplasma wodyetiae’, a new taxon associated with yellow decline disease of foxtail palm (Wodyetia bifurcata) in Malaysia
Larranaga et al. DNA barcoding of perennial fruit tree species of agronomic interest in the genus Annona (Annonaceae)
CAWTHORN et al. Establishment of a mitochondrial DNA sequence database for the identification of fish species commercially available in South Africa
Pérez-López et al. Detection and identification of the heterogeneous novel subgroup 16SrXIII-(A/I) I phytoplasma associated with strawberry green petal disease and Mexican periwinkle virescence
Makarevitch et al. Phylogenetic relationships of the Siberian Iris species inferred from noncoding chloroplast DNA sequences
Gürcan et al. Genotyping by sequencing (GBS) in apricots and genetic diversity assessment with GBS-derived single-nucleotide polymorphisms (SNPs)
Aveskamp et al. Development of taxon‐specific sequence characterized amplified region (SCAR) markers based on actin sequences and DNA amplification fingerprinting (DAF): a case study in the Phoma exigua species complex
Akiyama et al. Gene duplication and concerted evolution of mitochondrial DNA in crane species
Cai et al. The puzzle of Italian rice origin and evolution: determining genetic divergence and affinity of rice germplasm from Italy and Asia
Pratap et al. Cross‐genera amplification of informative microsatellite markers from common bean and scarlet runner bean for assessment of genetic diversity in mungbean (Vigna radiata)
Papaioannou et al. Structural and phylogenetic analysis of the rDNA intergenic spacer region of Verticillium dahliae
Chien et al. Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan
CN108588255B (en) Indel marker development for distinguishing five pepper cultivars and application thereof
Gunnels et al. The ITS region provides a reliable DNA barcode for identifying reishi/lingzhi (Ganoderma) from herbal supplements
Shakoor et al. ISSR markers and morphometry determine genetic diversity and population structure in Hedera helix L.