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Langsiri et al., 2023 - Google Patents

Targeted sequencing analysis pipeline for species identification of human pathogenic fungi using long-read nanopore sequencing

Langsiri et al., 2023

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Document ID
11939955834194356916
Author
Langsiri N
Worasilchai N
Irinyi L
Jenjaroenpun P
Wongsurawat T
Luangsa-Ard J
Meyer W
Chindamporn A
Publication year
Publication venue
IMA fungus

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Snippet

Among molecular-based techniques for fungal identification, Sanger sequencing of the primary universal fungal DNA barcode, the internal transcribed spacer (ITS) region (ITS1, 5.8 S, ITS2), is commonly used in clinical routine laboratories due to its simplicity …
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    • G06F19/22—Bioinformatics, i.e. methods or systems for genetic or protein-related data processing in computational molecular biology for sequence comparison involving nucleotides or amino acids, e.g. homology search, motif or SNP [Single-Nucleotide Polymorphism] discovery or sequence alignment
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    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or micro-organisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Hybridisation probes
    • C12Q1/6883—Hybridisation probes for diseases caused by alterations of genetic material
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    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
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    • C12Q2600/00—Oligonucleotides characterized by their use
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