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zoppellarielena/Readme.md

Contact information
email: elenazoppellari@gmail.com
Linkedin: Elena Zoppellari

Hello world! 🦊
I am a Physics graduate who has developed a fascination for computer science, in particular for deep learning for computer vision and natural language processing.
In my page you will find some of the projects and works that I have developed during my MSc in Physics of Data @ University of Padova:

🌈 Reports for Numerical Methods in Soft Matter (work in progress)
Topics: Monte Carlo and Molecular Dynamics simulation methods, including random sampling techniques, Markov Chains, Ising model simulations, advanced sampling algorithms, integration schemes, interaction potentials, thermostats, and Langevin dynamics.

🧠 Estimation and Analysis of Mutual Information in a Recurrent Neural Network (jan - mar 2024)
We conducted an analysis on the mutual information between the layers of a recurrent neural network for a cognitive task, implementing various estimators and particularly effectively adapting the estimator proposed by Kolchinsky et al. (2017). We also studied the role of individual neurons in the process, observing differentiated behaviors in terms of intensity and activation times.

👁️ Simulating Real-World Challenges: Blind Face Restoration and Upscaling (dic 2023 - jan 2024)
We adapted the progressive GAN by Kim et al. (2019) for the reconstruction of blurred faces under non-deterministic conditions. Specifically, we designed an encoder and introduced a dynamic training strategy with an attention loss based on geometric prior. The results show a significant improvement in the realism of the images, reducing FID, LPIPS, and NIQE.

🌴 Exercises for Physical Models for Living Systems (oct 2023 - jan 2024)
Homework 1-3: Focus on ecology modeling, covering topics such as linear stability analysis, quasi-stationary approximation, and matrix eigenvalue calculations for different ecological structures.
Homework 4-7: Address theoretical neuroscience, involving tasks such as generating spike trains for neurons, stability analysis of the Wilson-Cowan model, and simulations related to feedback loops in genetic networks.

🏃‍♀️ Mini-Batch K-means on RCV1 dataset using Dask (aug - sept 2023)
Together with my team, I implemented Mini-Batch K-Means on the vast RCV1 dataset of over 250GB, with over 800k articles each with 50k features, using Dask in Python for parallelizing the process and three Virtual Machines on CloudVeneto. The results, evaluated through the analysis of the Dask dashboard and execution time, guided the optimization of the configuration for optimal performance

✍️ BiLSTM vs BERT in feature extraction for Neural Dependency Parsing (jun 2023)
In this project, my team implemented two feature extractors to improve an ArcEager parser: a BiLSTM, achieving a UAS of 82%, and a fine-tuning of BERT, with a UAS of 85%, compared to a SoTA value of 93%. For the BERT model, an analysis of the predicted moves is provided, observing better performance for shift and reduce.

💰 Financial Mathematics Reports (mar - may 2023)
Topics: pricing a Call Option using the Binomial Model; recovering Implicit Dividends from Option Prices using Call-Put parity and the Box Spread Strategy; computing Option Prices using binomial, Leisen-Reimer and Black-Scholes models; the dependencies of Greek letters on stock value, maturity time, volatility and the rate of dividend yield; implied volatility smile, swek and Greek letters, Monte Carlo simulations on Vanilla options and exotic, path-dependent options such as Asian, Lookback and Barrier options.

🎨 Standard GAN vs WGAN for Image Colorization (jan - feb 2023)
In this project, my team implemented the conditional GAN pix2pix (Isola et al., 2016) on Pytorch for coloring black-and-white images created from Tiny-ImageNet-200. The results were compared in the case of training using the Wasserstein loss.

🤖 Basic Machine Learning Exercises (nov 2022 - jan 2023)
Topics: manual implementation of perceptron, logistic regression using scikit-learn, linear regression using scikit-learn, Support Vector Machines, Image classification using Neural Networks.

📬 Multinomial Naive Bayes for Fake News Classification (jul - aug 2022)
We developed a Multinomial Naive Bayes in R for fake news classification with both 2 (true/false) and 5 classes, achieving an accuracy of 92.51% in the first case and 23.77% in the second. A reliability test of the predictions was also conducted using Bayes' theorem and the rate of true and false positives and negatives.

💧 Rainfall-runoff modeling using Deep Learning (may - jun 2022)
Together with the team, I developed an LSTM to provide predictions on the hydrological basins of the CAMELS dataset using Keras in Python. We attempted to add an encoder to the model, which proved to perform better than the LSTM alone by leveraging the statistical information from the input. The project was supervised by Professor Carlo Albert from the Swiss Federal Institute of Aquatic Science and Technology.

🧭 Exercises in R for Advanced Statistics course (mar - jun 2022)
The exercises cover both basic and advanced statistic topics. Developed in R language.

🌌 Hierarchical mergers of binary black holes (feb - mar 2022)
Using both plotting and a simple machine learning algorithm, a random forest, we determined that the features that have the greatest impact on the fate of a binary black holes in nuclear star clusters, globular clusters and young star clusters are: black hole masses, spin magnitudes, escape velocities, total masses of the star clusters and the number of generations involved.

Popular repositories Loading

  1. Reports-for-Stochastic-Methods-for-Finance Reports-for-Stochastic-Methods-for-Finance Public

    This repository comprises a collection of reports covering various topics in advanced financial mathematics. Accompanying the reports are Visual Basic for Applications scripts used for data analysi…

    2

  2. Hierarchical-Mergers-of-Binary-Black-Holes Hierarchical-Mergers-of-Binary-Black-Holes Public

    Developed for "Laboratory of Computational Physics Mod. A", this project employs graphical and machine learning tools to identify the features with the greatest impact on the fate of binary black h…

    Jupyter Notebook 1

  3. Standard-GAN-vs-WGAN-for-Image-Colorization Standard-GAN-vs-WGAN-for-Image-Colorization Public

    Developed for the "Neural Networks and Deep Learning" course, this project utilizes PyTorch for GAN implementation.

    Jupyter Notebook 1

  4. Blind-Face-Restoration-and-Upscaling Blind-Face-Restoration-and-Upscaling Public

    This project, created for the "Vision and Cognitive Systems" course, employs generative networks with landmarks as priors to reconstruct full-size and small-size blind faces.

    Jupyter Notebook 1

  5. Estimation-and-Analysis-of-Mutual-Information-in-a-Recurrent-Neural-Network Estimation-and-Analysis-of-Mutual-Information-in-a-Recurrent-Neural-Network Public

    This project, developed as part of the "Information Theory and Inference" exam, aims to use different discrete and continous estimators to calculate the mutual information between layers of a RNN t…

    Jupyter Notebook 1

  6. LaboratoryOfComputationalPhysics_Y4 LaboratoryOfComputationalPhysics_Y4 Public

    Forked from denny-lamon/LaboratoryOfComputationalPhysics_Y4

    Repo for Laboratory of Computational Physics, year 21-22

    Jupyter Notebook