-
spatialtools Public
Small tools to help performing spatial transcriptomics analyses
Python MIT License UpdatedMay 7, 2025 -
NanoRCS Public
Forked from UMCUGenetics/NanoRCSNanoRCS: Multimodal genome-wide cfDNA sequencing and analysis
-
ichorCNA Public
Forked from broadinstitute/ichorCNAEstimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
-
ctimer Public
This is a python implementation of a famous time management technique. CTimer helps you keep track of your productivity during the day, and help you set realistic goals for your day.
-
statannotations Public
Forked from trevismd/statannotationsadd statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.
Python Other UpdatedOct 17, 2023 -
rawer Public
Nanopore consensus base caller with raw signals
Python MIT License UpdatedJul 23, 2023 -
-
FragmentOmics Public
Forked from BuysDB/SingleCellMultiOmicsTools which deal with multiple single cell measurements
Python MIT License UpdatedJul 6, 2023 -
fastq_corrupt_check Public
Check a FASTQ file to see if it is corrupt
-
-
kraken2 Public
Forked from DerrickWood/kraken2The second version of the Kraken taxonomic sequence classification system
C++ MIT License UpdatedJan 30, 2023 -
cookiecutter-python-template Public template
Forked from Lee-W/cookiecutter-python-templatePython Project template that supports PyPI publishment and basic docker image
Python GNU General Public License v3.0 UpdatedApr 1, 2022 -
disfactory-frontend Public
Forked from OH-SHOWN/ohshown-frontendFrontend of disfactory.tw. Built with Vue.js. For backend please checkout https://github.com/Disfactory/Disfactory
Vue UpdatedJan 23, 2022 -
somalier Public
Forked from brentp/somalierfast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"
Nim MIT License UpdatedJan 5, 2022 -
disfactory-backend Public
Forked from OH-SHOWN/ohshown-backend違章工廠舉報系統
Python MIT License UpdatedDec 4, 2021 -
calmap Public
Forked from MarvinT/calmapCalendar heatmaps from Pandas time series data
-
Krona Public
Forked from marbl/KronaInteractively explore metagenomes and more from a web browser.
JavaScript UpdatedFeb 12, 2021 -
-
cfdna_origin Public
This project focus on capturing sequence features in cfdna, in order to determine tissue-of-origin of cfdna
Jupyter Notebook GNU General Public License v3.0 UpdatedNov 30, 2020 -
calendar-heatmap Public
Forked from rougier/calendar-heatmapCalendar heatmap with matplotlib and random data
Python BSD 2-Clause "Simplified" License UpdatedAug 11, 2020 -
siCloneFitIO Public
This package contains a python interface for siCloneFit algorithm and visualization of the results. SiCloneFit is a Bayesian method for joint inference of tumor clones, clonal genotypes and clonal …
-
siml Public
Forked from taspinar/simlMachine Learning algorithms implemented from scratch
Jupyter Notebook MIT License UpdatedApr 8, 2020 -
concaller Public
concensus caller for circular amplified long read nanopore data
Python MIT License UpdatedMar 18, 2020 -
pycontw-postevent-report-generator Public
Forked from pycontw/postevent-report-generatorJupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedDec 9, 2019 -
medaka Public
Forked from nanoporetech/medakaSequence correction provided by ONT Research
Python Other UpdatedDec 5, 2019 -
attendees-analyzer Public
Forked from tai271828/pycontw-postevent-report-generator-legacyAnalyze attendee information
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedOct 13, 2019 -
doc Public
Forked from Snakemake-Profiles/docDocumentation of the Snakemake-Profiles project.
MIT License UpdatedAug 19, 2019 -
ete Public
Forked from etetoolkit/etePython package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …
Python GNU General Public License v3.0 UpdatedJun 29, 2019 -
NetworksSession Public
Forked from CFWP/NetworksSessionAll materials for the Networks practical of the 2019 Statistics for Omics course
HTML UpdatedJun 24, 2019 -
RadiomicsSession Public
Forked from CFWP/RadiomicsSessionAll materials for the Radiomics part of the 2019 Statistics for Omics course
HTML UpdatedJun 24, 2019
{{ message }}