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skeletor Public
Forked from navis-org/skeletorExtraction of 3D skeletons from meshes.
Python GNU General Public License v3.0 UpdatedApr 13, 2025 -
igneous Public
Forked from seung-lab/igneousScalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
Python GNU General Public License v3.0 UpdatedApr 7, 2025 -
cloud-volume Public
Forked from seung-lab/cloud-volumeRead and write Neuroglancer datasets programmatically.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 22, 2025 -
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cellpose Public
Forked from GFleishman/cellposea generalist algorithm for cellular segmentation
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJan 31, 2025 -
FeARLesS Public
Forked from gioda/FeARLesS4D reconstruction of developmental trajectories using spherical harmonics
Python MIT License UpdatedJan 9, 2025 -
knossos_utils Public
Forked from knossos-project/knossos_utilsPython library for interacting with KNOSSOS data sets and annotation files
Python GNU General Public License v2.0 UpdatedSep 10, 2024 -
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corpuscles Public
Forked from cselab/corpusclesSimulate cells and particles
Fortran GNU General Public License v3.0 UpdatedMay 22, 2024 -
graph-tool Public
Forked from antmd/graph-toolgraph-tool - Efficient network analysis
C++ GNU General Public License v3.0 UpdatedOct 5, 2023 -
MD_interaction_network Public
A python script for polor interaction network analysis in MD simulation
Jupyter Notebook UpdatedSep 12, 2023 -
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MorphoFeatures-GC Public
Forked from kreshuklab/MorphoFeaturesMorphoFeatures code and data
Python GNU General Public License v3.0 UpdatedMay 4, 2023 -
single-cell-tutorial Public
Forked from theislab/single-cell-tutorialSingle cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
Jupyter Notebook UpdatedDec 11, 2022 -
cerebellum-atlas-analysis Public
Forked from MacoskoLab/cerebellum-atlas-analysisCode and scripts used in analysis of snRNAseq cerebellar cortex atlas
HTML UpdatedOct 11, 2021
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