8000 GitHub - wwliao/pangenome-utils: Helper scripts used to analyze pangenome graphs

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Helper scripts used to analyze pangenome graphs

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Name		Name	Last co 8000 mmit message	Last commit date
Latest commit History 26 Commits
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
classify_dip_stable_traversals.py		classify_dip_stable_traversals.py
classify_walks.py		classify_walks.py
convert_pline_to_wline.py		convert_pline_to_wline.py
convert_wline_to_pline.py		convert_wline_to_pline.py
create_bandage_csv_labels.py		create_bandage_csv_labels.py
filter_gaf.sh		filter_gaf.sh
filter_traversal_pairs.py		filter_traversal_pairs.py
get_allele_from_walk.py		get_allele_from_walk.py
get_dip_stable_traversals.py		get_dip_stable_traversals.py
get_edge_depth_per_allele.py		get_edge_depth_per_allele.py
get_edge_depth_per_traversal.py		get_edge_depth_per_traversal.py
get_ref_nodes.py		get_ref_nodes.py
get_snarl_depth.py		get_snarl_depth.py
pair_traversals.py		pair_traversals.py
parse_snarls.py		parse_snarls.py
parse_traversals.py		parse_traversals.py
preprocess_pvcf.sh		preprocess_pvcf.sh
preprocess_vcf.sh		preprocess_vcf.sh