Docker image with cellxgene and the VIP plugins.
To build this container you can use the following command:
git clone https://github.com/usegalaxy-eu/docker-cellxgene-vip.git
cd docker-cellxgene-vip
docker build -t CONTAINER_NAME .The container is stored on Quay.io and you can get it via:
docker pull quay.io/bgruening/cellxgene-vip:latestdocker run --rm -it -p 5005:5005 -v PATH/TO/DATA/CONTAINING/DIRECTORY:/data CONTAINER_NAME cellxgene launch /data/FILE.h5ad --host 0.0.0.0 --port 5005Then you can access the app via: http://0.0.0.0:5005/
The original Dockerfile is from Benedikt Obermayer (bobermayer).