This repository contains scripts to:
- Download raw ENCODE eCLIP fastq files
- Pre-process them to ensure they can be run through the nf-core/clipseq pipeline
- Run them through the nf-core/clipseq pipeline
-
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Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
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ulelab/peka-eclip
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Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
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