8000 Commits · ucl-pond/pySuStaIn-1 · GitHub

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This repository was archived by the owner on Apr 1, 2025. It is now read-only.

Commits

Commits on Aug 15, 2022

Update AbstractSustain.py
ayoung11
authored

Commits on Oct 27, 2021

Update README.md
ayoung11
authored

Commits on Oct 22, 2021

Commits on Sep 16, 2021

Commits on May 5, 2021

Commits on Apr 21, 2020

Commits on Apr 20, 2020

Added jupyter notebook tutorial on how to use SuStaIn
ayoung11
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Updated README.md
ayoung11
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Updated plot_sustain_model to work for a single sample. Changed the title labels for positional variance diagrams to reflect that N for each subtype is approximated based on fraction. Changed the x…
ayoung11
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Updated simrun to work with new edits
ayoung11
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Updated simfuncs to take as input Z_vals and Z_max
ayoung11
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Outputted additional probabilities for staging to enable advanced staging methods in future, corrected CVIC calculation and relabeled previous CVIC_matrix to loglikelihood_matrix, saved mean_likeli…
ayoung11
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Altered Abstract SuStaIn so that running the SuStaIn algorithm and cross-validation don't output the results from the final subtypes model only to avoid confusion
ayoung11
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Altered ZscoreSuStaIn __init__ to allow for different numbers of z-scores per biomarker by entering zeros in redundant columns of Z_vals matrix
ayoung11
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Corrected subtype_and_stage_individuals_newData in ZscoreSuStaIn.py
ayoung11
committed

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