Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
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Jun 11, 2025 - Python
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neuroscience-methods
Here are 116 public repositories matching this topic...
A publicly-editable collection of open computational neuroscience resources
awesome computational-biology neuroscience computational-neuroscience open-science awesome-list brain neuroimaging-data neuroscience-methods neuroscience-data neural-simulators electrophysiological-data neuron-models neural-simulations simulation-neuroscience
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Apr 11, 2024
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿🔬
neuroscience computational-neuroscience neural-networks brain-network neuroscience-methods mean-field-theory brain-simulations brain-modeling
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Jan 9, 2025 - Python
a visualization method for neural data
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Apr 4, 2025 - Python
Interactive Brain Playground - Browser based tutorials on EEG with webbluetooth and muse
react-native curriculum js data-visualization eeg openbci ecg muse data-analysis educational plotting eeg-data bci frequency-domain neurotech neuroscience-methods brain-waves muse-data muse-lsl muse-headsets
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Dec 21, 2023 - JavaScript
An introduction to the practicing neuroscientist to data analysis in Python
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Mar 7, 2023 - Jupyter Notebook
Just Another Tool for Online Studies
neuroscience psychology psychology-experiments online-studies neuroscience-methods online-experiment jatos
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Jun 6, 2025 - JavaScript
Robust video-based eye tracking using recursive estimation of pupil characteristics
open-source gui algorithm prediction eye-tracking neuroscience-methods pupil-detection recursive-estimation pupil-characteristics video-oculography
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Apr 11, 2022 - C++
Toolbox for analyzing behavioral videos and neural activity
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Dec 3, 2023 - Python
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
behavior-analysis animal-behavior neuroscience-methods animal-science deeplabcut closed-loop-experiments
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Jul 1, 2023 - Python
NeuroAI-UW seminar, a regular weekly seminar for the UW community, organized by NeuroAI Shlizerman Lab.
data-science ai deep-learning recurrent-neural-networks neural-networks cvpr sfn icml neuroscience-methods eccv neurips
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May 27, 2025
[NeurIPS'23 Spotlight] Official Repo for "Extraction and Recovery of Dpatio-temporal Structure in Latent Dynamics Alignment with Diffusion Models"
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Mar 10, 2025 - Python
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
neuroscience imaging-informatics calcium-imaging motion-correction imaging neuroscience-methods signal-extraction imaging-analysis
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Sep 15, 2023
Tools and functions for neural data processing and analysis in python
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Apr 26, 2025 - Python
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
neuroscience neuroimaging neuroinformatics python-package data-curation neuroscience-methods neuroimaging-data-science data-organization
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Jun 9, 2025 - Python
Gaussian-Processes Surrogate Optimisation in python
neuroscience python3 gaussian-processes optimisation neuroscience-methods bayesian-optimisation gpflow space-partition-tree gaussian-processes-surrogate scale-biophysical-models partition-tree brainweb
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May 18, 2021 - Python
Robust electrophysiology tools with GPU acceleration
signal-processing neuroscience meg eeg eeg-signals electrophysiology ica eeg-analysis neuroscience-methods eeg-classification eeg-signals-processing ieeg seeg intracranial-eeg neurosurgery eeg-preprocessing eeg-pipeline eeg-signals-classification eeg-components eeg-statistics
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Jun 19, 2025 - Cuda
SpikeShip: A method for fast, unsupervised discovery of high-dimensional neural spiking patterns.
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Apr 18, 2024 - Jupyter Notebook
MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney
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Apr 20, 2021 - MATLAB
[NeurIPS'24 Poster] Official Repo for Paper "Exploring Behavior-Relevant and Disentangled Neural Dynamics with Generative Diffusion Models"
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Oct 15, 2024 - Python
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