🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies
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Feb 26, 2025 - Python
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liftover
Here are 24 public repositories matching this topic...
Same species annotation lift over pipeline.
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Jul 21, 2023 - Ruby
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
visualization bioinformatics sequencing liftover dna protein alignment fasta fluent ddv msa fasta-sequences bioinformatics-tool chain-alignment fluentdna
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Jul 19, 2021 - JavaScript
A Nextflow workflow to generate lift over files for any pair of genomes
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Jun 17, 2025 - Nextflow
This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.
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Mar 2, 2023 - C++
Lifterover copy number segments in whole
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Feb 6, 2024 - Python
An efficient genetic data imputation pipeline
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Apr 7, 2022 - R
A crate for working with genomics chain files.
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Jan 4, 2025 - Rust
Variant translation library for Clojure
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May 12, 2025 - Clojure
Code for annotating GWAS with rsIDs and performing genome build liftover
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Jun 6, 2025 - R
Repository for miscellaneous bioinformatics scripts that may be useful to others.
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Feb 7, 2017 - Python
A Snakemake Workflow for using PolyA_DB and UCSC LiftOver with CellRanger
python shell workflow snakemake liftover bioinformatics-pipeline multiqc reproducibility transcriptomics single-cell-rna-seq fastqc cellranger
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Jan 27, 2022 - Python
work for creating hg38 database files from hg19 sources
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Sep 20, 2019 - Python
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