hmmer
Here are 28 public repositories matching this topic...
Cython bindings and Python interface to HMMER3.
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Mar 1, 2025 - Cython
A package to annotate protein sequences
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Feb 23, 2025 - Python
Annotate DNA sequences for Gene Ontology terms
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Jul 2, 2022 - Perl
Django website project for common sequence search tools.
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Oct 1, 2024 - JavaScript
A Pure-Python parser of HMMER3 output
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Oct 14, 2024 - Python
A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.
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Jul 14, 2024 - HTML
Query sequence database by HMMs arranged in predefined synteny structure
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Nov 3, 2023 - Python
Collection of bioinformatics analysis code and replication records for academic papers
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Feb 14, 2025 - R
An ML-based predictor of GPCR/G-protein couplings using only sequence information
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May 17, 2022 - Python
A lightweight rewrite of run_dbcan for better multithread performance
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Jan 27, 2025 - Python
basic visualization of hmm profile matches to multiple fasta files
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Apr 3, 2017 - Python
MetAnnotate is a tool and web application for taxonomic profiling of shotgun metagenomes.
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May 5, 2018 - JavaScript
Create HMMs from KEGG orthologs
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Jul 7, 2018 - Makefile
This repository contains the code used for screening putative extracellular Contractile Injection System (eCIS) loci from genomic sequences.
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Feb 23, 2024 - Perl
Find NLR hmms in protein sequences.
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Apr 10, 2024 - Shell
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