MyGene.info: A BioThings API for gene annotations
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May 23, 2025 - Python
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gene-annotations
Here are 6 public repositories matching this topic...
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
pubmed pubmed-central entrez meta-analysis gene-annotations literature-mining eutilities literature-search entrez-eutilities
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Nov 2, 2023 - Python
A fully automated gene annotator from RNA-Seq expression data
bioinformatics rna-seq finder bioinformatics-pipeline genome-annotation protein-sequences gtf gene-models transcripts gene-annotations changepoint-detection predict-genes gene-annotation-pipeline
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Jul 1, 2023 - Python
Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biom B7E9 art integration from Ensembl dataset. Originally developed as part of a Masters in Bioinformatics project @ University of Exeter
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May 7, 2017 - Ruby
A Python script to filter and extract information from GTF files based on chromosome names, designed to be easily accessible for biologists without extensive programming experience.
bioinformatics genomics gtfs computational-biology data-extraction gtf gtfs-dataset data-filtering biologists gene-annotations
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Jun 7, 2023 - Python
Gene Info Extractor: A Python script to extract gene information and annotations from CSV data
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Jun 9, 2023 - Python
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