An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.
Precision current source, with optional optical feedback, for driving LEDs and laser diodes
An open-source Arduino based chlorophyll fluorometer for quantifying photosynthesis in photosynthetic organisms.
File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy (Sample data: https://gitlab.peulen.xyz/skf/tttr-data)
An open-source python library for the processing of fluorescence video data
Library for coarse-grained simulations of probes flexibly coupled to biomolecules.
This software is used to analyze protein thermal and chemical stability data monitored by CD or fluorescence spectroscopy.
A Monte Carlo simulation code of energy dispersive, photon counting (PC) silicon drift detectors (SDDs) for x-ray fluorescence (XRF) and spectrometry applications. The simulation includes PC detectors intended for spectrometry and molecular imaging. The detector is based on Amptek XR100 FastSDD Xray detector (Amptek Inc., Bedford, MA, USA)
Single Molecule Fluorescence Simulator Toolkit
FRET-screening of conformations and experiment planning
Maximum likelihood fits for low photon count data - For active develeopment visit gitlab.peulen.xyz
Interface to the image correlation spectroscopy library ICSx64.dll.
XRF-Maps is a C++ open source software package that implements these functions to provide a tool set for the analysis of XRF data sets
Here you can find some of my Arduino based projects
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