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Functional_haplotype_GWAS Public
Forked from Fangv1/Functional_haplotype_GWASSelecting closely-linked SNPs based on local epistatic effects for haplotype construction improves power of association mapping
R UpdatedOct 25, 2019 -
smoove Public
Forked from brentp/smoovestructural variant calling and genotyping with existing tools, but, smoothly.
Go Apache License 2.0 UpdatedAug 26, 2019 -
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python_project Public
Forked from pythonchannel/python_projectthe test project
Python UpdatedJun 20, 2019 -
mamba Public
Forked from mamba-org/mambaA FAST drop-in replacement for the conda command-line utility, in C++,
Python UpdatedJun 12, 2019 -
Plasticity Public
Forked from TingtingGuo0722/PlasticityRice flowering time plasticity
R UpdatedJun 3, 2019 -
mikado Public
Forked from EI-CoreBioinformatics/mikadoMikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.
Python GNU Lesser General Public License v3.0 UpdatedJun 3, 2019 -
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Peregrine Public
Forked from cschin/PeregrinePeregrine: Fast Genome Assembler Using SHIMMER Index
Jupyter Notebook Other UpdatedMay 23, 2019 -
vsearch Public
Forked from torognes/vsearchVersatile open-source tool for metagenomics
C++ Other UpdatedMay 11, 2019 -
funannotate Public
Forked from nextgenusfs/funannotateEukaryotic Genome Annotation Pipeline
Python BSD 2-Clause "Simplified" License UpdatedMay 2, 2019 -
strawberry Public
Forked from ruolin/strawberryA program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
C++ MIT License UpdatedApr 24, 2019 -
GEAN Public
Forked from baoxingsong/GEANThis toolkit deals with GEnomic sequence and gene structure ANnotation files between inbreeding lines and species.
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RNAsamba Public
Forked from apcamargo/RNAsambaCoding score calculation using deep learning
Python GNU General Public License v3.0 UpdatedApr 20, 2019 -
draw_genes Public
Forked from gmcvicker/draw_genesA flexible python program for generating figures from regions of the genome.
Python UpdatedApr 6, 2019 -
docker-galaxy-genome-annotation Public
Forked from galaxy-genome-annotation/docker-galaxy-genome-annotation🐳 Galaxy Docker Image with Tools for Genome Annotation
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QTLseqr Public
Forked from bmansfeld/QTLseqrQTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
R UpdatedFeb 28, 2019 -
gameofthrones Public
Forked from aljrico/gameofthronesColour Palette for R inspired in the TV show Game of Thrones
HTML Other UpdatedFeb 9, 2019 -
PopLDdecay Public
Forked from BGI-shenzhen/PopLDdecayPopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
C++ MIT License UpdatedJan 16, 2019 -
pretzel Public
Forked from plantinformatics/pretzelJavascript full-stack framework for Big Data visualisation and analysis
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WheatGeneAnnotation Public
Aim to improve wheat gene structure annotation using multiple transcriptome data
MIT License UpdatedDec 20, 2018 -
python-highcharts Public
Forked from kyper-data/python-highchartsA simple translation layer between Python and Javascript for Highcharts projects (highcharts, highmaps, and highstocks).
Python MIT License UpdatedDec 14, 2018 -
WheatCo-expression Public
build co-expression network for wheat
Python MIT License UpdatedNov 28, 2018 -
wheat-methylation Public
Analysis wheat methylation data using BS-Seeker2 and CGmapTools
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bamdst Public
Forked from shiquan/bamdsta lightweight bam file depth statistical tool
C Other UpdatedOct 31, 2018 -
flo Public
Forked from wurmlab/floSame species annotation lift over pipeline.
Ruby UpdatedOct 18, 2018
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