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nf-corehackathon-march2025 Public
Updates on running mcmicro at nf-core 2025 hackathon
UpdatedMar 24, 2025 -
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modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedJan 9, 2025 -
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test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedJan 2, 2025 -
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starfish Public
Forked from spacetx/starfishstarfish: unified pipelines for image-based transcriptomics
Python MIT License UpdatedFeb 14, 2024 -
minimal-nextflow-test Public
Minimal nextflow for workflow for testing and learning
Python UpdatedNov 10, 2023 -
spatial-pipeline Public
Nextflow workflow for the end-to-end analysis image-based spatial-omics data.
Python MIT License UpdatedSep 26, 2023 -
training-resources Public
Forked from NEUBIAS/training-resourcesResources for teaching/preparing to teach bioimage analysis
ImageJ Macro Other UpdatedMay 26, 2023 -
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napari-spacetx-explorer Public
A simple plugin for an interactive visualization of spatial omics data.
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mcmicro_hackathon_2022 Public
Forked from SchapiroLabor/mcmicro_hackathon_2022Website for the MCMICRO hackathon 2022
HTML MIT License UpdatedOct 21, 2022 -
napari-feature-classifier Public
Forked from fractal-napari-plugins-collection/napari-feature-classifierPython BSD 3-Clause "New" or "Revised" License UpdatedFeb 13, 2022 -
advanced_machine_learning Public
Forked from FlorianMarquardt/advanced_machine_learningCode to go along the lecture course "Advanced Machine Learning for Physics, Science, and Artificial Scientific Discovery"
Jupyter Notebook MIT License UpdatedFeb 6, 2022 -
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practical-python Public
Forked from dabeaz-course/practical-pythonPractical Python Programming (course by @dabeaz)
Python Creative Commons Attribution Share Alike 4.0 International UpdatedOct 1, 2021 -
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scikit-image Public
Forked from scikit-image/scikit-imageImage processing in Python
Python Other UpdatedJun 8, 2021 -
napari Public
Forked from napari/naparinapari: a fast, interactive, multi-dimensional image viewer for python
Python BSD 3-Clause "New" or "Revised" License UpdatedJun 4, 2021 -
tiny_python_projects Public
Forked from kyclark/tiny_python_projectsCode for Tiny Python Projects (Manning, 2020, ISBN 1617297518). Learning Python through test-driven development of games and puzzles.
Python MIT License UpdatedMay 27, 2021 -
it-cert-automation-practice Public
Forked from google/it-cert-automation-practiceGoogle IT Automation with Python Professional Certificate - Practice files
Python Apache License 2.0 UpdatedMay 5, 2021 -
machine-learning-for-physicists Public
Forked from FlorianMarquardt/machine-learning-for-physicistsCode for "Machine Learning for Physicists 2020" lecture series
Jupyter Notebook UpdatedApr 27, 2021 -
first-contributions Public
Forked from firstcontributions/first-contributions🚀✨ Help beginners to contribute to open source projects
MIT License UpdatedMar 21, 2021 -
pyABC Public
Forked from ICB-DCM/pyABCdistributed, likelihood-free inference
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 14, 2021 -
FitMultiCell_Tutorial Public
Contains code and morpheus files used as a FitMultiCell tutorial for parameter estimation and model selection.
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Ongoing work on cell motility system for the CPM using Morpheus, FitMultiCell, and Python
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MachineLearningA-Z Public
General working directory for Machine Learning projects.
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