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@sys-bio

UW Sauro Lab

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  1. tellurium tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    Python 116 37

  2. roadrunner roadrunner Public

    Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    C++ 48 25

Repositories

Showing 10 of 110 repositories
  • SimpleSEDML Public

    A simple API for using the Simulation Experiment Description Markup Language (SED-ML)

    sys-bio/SimpleSEDML’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 8, 2025
  • SBMLNetwork Public Forked from adelhpour/SBMLNetwork

    SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

    sys-bio/SBMLNetwork’s past year of commit activity
    C++ 0 MIT 1 5 3 Updated May 8, 2025
  • NuML Public Forked from NuML/NuML

    Numerical Markup Language

    sys-bio/NuML’s past year of commit activity
    C++ 0 8 0 0 Updated May 7, 2025
  • temp-biomodels Public

    Temporary place for coordination of updating existing Biomodels

    sys-bio/temp-biomodels’s past year of commit activity
    Component Pascal 2 CC0-1.0 2 15 0 Updated May 6, 2025
  • SimBioUI Public

    Web systems biology simulator

    sys-bio/SimBioUI’s past year of commit activity
    JavaScript 0 MIT 2 16 1 Updated May 6, 2025
  • AntimonyEditor Public

    Antimony Web Editor: A Web Editor for the Antimony Modeling Language

    sys-bio/AntimonyEditor’s past year of commit activity
    TypeScript 0 MIT 2 19 3 Updated May 6, 2025
  • libroadrunner-deps Public

    Dependencies for libroadrunner

    sys-bio/libroadrunner-deps’s past year of commit activity
    CMake 4 5 0 2 Updated May 5, 2025
  • antimony Public
    sys-bio/antimony’s past year of commit activity
    C++ 18 BSD-3-Clause 4 26 0 Updated May 3, 2025
  • BMCA-pipeline Public Forked from janisshin/BMCA-pipeline
    sys-bio/BMCA-pipeline’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated May 3, 2025
  • BiomodelsCache Public

    A biomodels cache for faster lookup.

    sys-bio/BiomodelsCache’s past year of commit activity
    Python 0 CC0-1.0 1 0 0 Updated May 1, 2025
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