Stars
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Single-cell analysis in Python. Scales to >100M cells.
A full spaCy pipeline and models for scientific/biomedical documents.
Cloud-native genomic dataframes and batch computing
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Official code repository for GATK versions 4 and up
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Official git repository for Biopython (originally converted from CVS)
Ansible modules - these modules ship with ansible
Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy and maintain. Automate everything from code deployment to network configuration to clo…
Network Automation and Programmability Abstraction Layer with Multivendor support