Lists (4)
Stars
A simple Snakemake profile for Slurm without --cluster-config
Analysis output of trained DeepLabCut model to detect pupil position, size, and blinks.
Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.
Code in progress for preprocessing and analysis of imaging data in the VR version of the ABCD schema task.
moellh / GPRat
Forked from SC-SGS/GPRatThis fork extends GPXPy with GPU support.
A Tensorflow based library for Time Series Modelling with Gaussian Processes
Branching Gaussian process
Tools for motion correcting, compressing, demixing and visualizing single cell functional imaging data
Tools for spike data analysis and visualization
Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
Template repository for setting a reproducible research project.
Code for Mixture of Input-Output Hidden Markov Models for Heterogeneous Disease Progression Modeling
A Python package for probabilistic state space modeling with JAX
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
Yet Another Python Profiler, but this time multithreading, asyncio and gevent aware.
An integrated software for the cellular and circuit physiology of visual processing during behavior --- 🎥 🔧 💽