8000 subercui (Haotian Cui) / Starred · GitHub
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Starred repositories

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A concise but complete full-attention transformer with a set of promising experimental features from various papers

Python 5,338 459 Updated May 30, 2025

Code for running RFdiffusion

Python 2,207 447 Updated Apr 11, 2025

This package contains deep learning models and related scripts for RoseTTAFold

Python 2,143 448 Updated Feb 15, 2024

Cell2Sentence: Teaching Large Language Models the Language of Biology

Jupyter Notebook 154 18 Updated May 21, 2025
Python 102 14 Updated May 29, 2025

Genome modeling and design across all domains of life

Jupyter Notebook 2,817 302 Updated May 28, 2025

Arc Virtual Cell Atlas

Jupyter Notebook 291 29 Updated May 6, 2025

FlashMLA: Efficient MLA decoding kernels

Cuda 11,579 838 Updated Apr 29, 2025

Finetune Qwen3, Llama 4, TTS, DeepSeek-R1 & Gemma 3 LLMs 2x faster with 70% less memory! 🦥

Python 39,729 3,141 Updated May 30, 2025

Large-Scale Multimodal Dataset of Astronomical Data

Jupyter Notebook 406 53 Updated May 8, 2025

A 15TB Collection of Physics Simulation Datasets

Jupyter Notebook 876 69 Updated May 21, 2025

A generative world for general-purpose robotics & embodied AI learning.

Python 25,178 2,253 Updated May 31, 2025

This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shot active learning.

Python 255 58 Updated Mar 27, 2025

Software package for computer aided synthesis planning

Python 229 57 Updated Nov 27, 2023

Message Passing Neural Networks for Molecule Property Prediction

Python 1,968 637 Updated May 30, 2025

Implementation of Alphafold 3 from Google Deepmind in Pytorch

Python 1,440 188 Updated Jan 22, 2025

Python 3.8+ toolbox for submitting jobs to Slurm

Python 1,442 138 Updated May 21, 2025

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

Jupyter Notebook 50,432 7,300 Updated Apr 20, 2025

MLX: An array framework for Apple silicon

C++ 20,770 1,219 Updated May 30, 2025

pyrelational is a python active learning library for rapidly implementing active learning pipelines from data management, model development (and Bayesian approximation), to creating novel active le…

Jupyter Notebook 155 13 Updated Jan 20, 2025

A modular framework for neural networks with Euclidean symmetry

Python 1,092 162 Updated May 1, 2025

Stanford NLP Python library for Representation Finetuning (ReFT)

Python 1,480 126 Updated Feb 6, 2025

DSPy: The framework for programming—not prompting—language models

Python 24,587 1,908 Updated May 30, 2025

Minimal, clean code for the Byte Pair Encoding (BPE) algorithm commonly used in LLM tokenization.

Python 9,668 917 Updated Jul 1, 2024

Modeling, training, eval, and inference code for OLMo

Python 5,635 611 Updated May 28, 2025

[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.

Python 22,656 2,500 Updated Aug 12, 2024

Building a quick conversation-based search demo with Lepton AI.

TypeScript 8,110 1,030 Updated Apr 1, 2025

Mamba SSM architecture

Python 14,983 1,314 Updated May 25, 2025

An Autonomous LLM Agent for Complex Task Solving

Python 8,351 883 Updated Aug 12, 2024

🌟 The Multi-Agent Framework: First AI Software Company, Towards Natural Language Programming

Python 56,033 6,683 Updated May 16, 2025
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