8000 Feature request: how to use github actions with reticulate · Issue #999 · rstudio/reticulate · GitHub
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Feature request: how to use github actions with reticulate #999

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njtierney opened this issue Apr 30, 2021 · 2 comments
Open

Feature request: how to use github actions with reticulate #999

njtierney opened this issue Apr 30, 2021 · 2 comments

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@njtierney
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The current vignette, Using reticulate in an R Package Provides a section on how to install python packages in Travis.

Would it be possible to add recommended ways on installing through github actions? Despite my best efforts it still seems that I cannot install Python packages properly for greta and some official guidance on the best way to do this would be really helpful!
@dfalbel
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dfalbel commented Apr 30, 2021

I agree adding docs would be great! FWIW: this has been working for Keras and other TF related packages.

      - name: Install Miniconda
        run: |
          Rscript -e "remotes::install_github('rstudio/reticulate')"
          Rscript -e "reticulate::install_miniconda()"
      - if: runner.os == 'macOS'
        run: echo "options(reticulate.conda_binary = reticulate:::miniconda_conda())" >> .Rprofile
      - name: Install TensorFlow
        run: |
          Rscript -e "reticulate::conda_create('r-reticulate', packages = c('python==3.7', 'numpy==1.19'))"
          Rscript -e "remotes::install_local()"
          Rscript -e "keras::install_keras(tensorflow = Sys.getenv('TF_VERSION'), extra_packages = c('IPython', 'requests', 'certifi', 'urllib3'))"

https://github.com/rstudio/keras/blob/67b3f185315b49644ef6bd7ef26b14aafb2c3bea/.github/workflows/main.yaml#L46-L56

njtierney added a commit to njtierney/greta that referenced this issue May 3, 2021
@njtierney
try out Rstudio/keras' method as mentioned in rstudio/reticulate#999
5110216
@njtierney
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Thanks so much for this, @dfalbel - this appears to have been the missing link in our CI github actions journey!

@sgosline sgosline mentioned this issue Jan 19, 2022
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@bschilder bschilder mentioned this issue Sep 19, 2023
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