This git repo contains the R markdown document and ipython notebook that I used to construct a demo of reviewing R, Cytoscape and Python for Data Visualization and Exploration, initially presented to the Metabolomics Data Visualization Working Group on May 13, 2014, and subsequently re-used elsewhere.
To get this presentation and data, clone the git repo to a local machine.
The html version of the R, ggplot and Cytoscape demo can be found in the repo. It can also be viewed online here.
Please note that some of the graphics currently do not show correctly in the HTML version, however when running the code locally it should work. As well, none of the Cytoscape graphs are shown, this will hopefully be corrected in future versions.
The ipython notebook covering matplotlib can be viewed here.
All content is licensed as CC0, I waive any copyright I might have to this material. However, if you use it, be a good netizen and reference where you obtained it.