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jgrade2 Public
Forked from dscpsyl/jgrade2An update to the original jGrade for Java 17 and jUnit 5
Java MIT License UpdatedNov 19, 2023 -
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rootstock Public
Forked from manubot/rootstockClone me to create your Manubot manuscript
HTML Other UpdatedJul 14, 2023 -
covid19-review Public
Forked from greenelab/covid19-reviewA collaborative review of the emerging literature on diagnostics and treatments related to COVID-19
HTML Other UpdatedJan 31, 2023 -
VBO_scrapeclubs Public
Code to scrape data from kennel clubs
Python Creative Commons Zero v1.0 Universal UpdatedNov 4, 2022 -
docxToManubot Public
Extract track changes from the body of a DOCX file and push to a manubot project
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pegas Public
Forked from emmanuelparadis/pegasPopulation and Evolutionary Genetics Analysis System
R GNU General Public License v2.0 UpdatedOct 17, 2021 -
mtDNA-network Public
Code & data for red fox mtDNA network construction in pegas (modified)
R UpdatedOct 15, 2021 -
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greenelab.com-1 Public
Forked from greenelab/greenelab.comThe website source code for greenelab.com
SCSS BSD 3-Clause "New" or "Revised" License UpdatedAug 4, 2021 -
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Haverford_Superlab21 Public
Code for the Spring semester of Superlab
R Creative Commons Zero v1.0 Universal UpdatedApr 23, 2021 -
lab-website-template Public template
Forked from greenelab/lab-website-template(Pre-release) An easy-to-use, flexible website template for labs, with automatic citations, GitHub tag imports, pre-built components, and more
HTML BSD 3-Clause "New" or "Revised" License UpdatedMar 25, 2021 -
greenelab.com Public
Forked from jjc2718/greenelab.comThe website source code for greenelab.com
HTML UpdatedSep 16, 2020 -
onboarding Public
Forked from greenelab/onboardingOnboarding materials for the Greene Lab
Creative Commons Zero v1.0 Universal UpdatedAug 11, 2020 -
covid-19_sinai_reviews Public
Forked from ismms-himc/covid-19_sinai_reviewsHTML Other UpdatedMay 11, 2020 -
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annorxiver Public
Forked from greenelab/annorxiverAnnotating Rxiv preprints in an automated fashion
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedApr 16, 2020 -
MATSS Public
Forked from weecology/MATSSR Package for Macroecological Analysis of Time Series Structure (MATSS)
R Other UpdatedMar 26, 2020 -
rheum-plier-data Public
Forked from greenelab/rheum-plier-dataData repository for the MultiPLIER project
R BSD 3-Clause "New" or "Revised" License UpdatedMar 2, 2020 -
GeneMapperToCSV Public
Take GeneMapper output files and convert them into a single table in CSV format, allowing you to organize all genotypes for a single individual
Python MIT License UpdatedDec 17, 2019 -
python-docx Public
Forked from jfthuong/python-docxCreate and modify Word documents with Python
Python MIT License UpdatedOct 23, 2019 -
SNPscans Public
Some scripts for analyzing signals of selection across the fox genome
Python UpdatedMay 20, 2019 -
FoxYmarkers Public
scripts associated with Rando et al. (2017) Y-Chromosome Markers for the Red Fox
UpdatedApr 15, 2019 -
MashMap Public
Forked from marbl/MashMapA fast approximate aligner for long DNA sequences
C++ Other UpdatedMar 22, 2019 -
yassembly Public
Scripts for a collaboration on identifying Y-chromosome sequence
R UpdatedFeb 20, 2019 -
HTCGenotyping Public
Here is a pipeline I developed to run GATK for variant calling on the biocluster at UIUC, which uses a slurm queue management system
Shell GNU General Public License v2.0 UpdatedFeb 20, 2019
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