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Issues list

Permutation thresholds produce only NA values conditional analysis cis
#54 opened Apr 25, 2025 by msalamon2
How are NAs in covariate files handled?
#53 opened Jul 18, 2024 by hamanakakohei
1
going from nominal P values to adjusted P values by beta-approximation
#49 opened May 3, 2023 by yildizkoca
[Error] in building qtltools under Archlinux
#48 opened Apr 12, 2023 by kbipinkumar
cis QTL mapping using bounded values
#47 opened Feb 9, 2023 by wod31
Save an indexed genotype file in easily-accessed format for qtltools' mbv matching algo
#45 opened Jun 2, 2022 by JosephLalli
1
map trans-QTLs and covariates
#44 opened Apr 13, 2022 by CTLife
Simplify the installation process
#43 opened Apr 13, 2022 by wbszhu
r_squared
#42 opened Mar 24, 2022 by nnishiyama
FPKM or log2(FPKM) for Phenotype data
#41 opened Feb 22, 2022 by CTLife
standard error of effect size (beta_se) estimation
#39 opened Feb 2, 2022 by Shicheng-Guo
2
Install Error
#38 opened Jan 16, 2022 by jkane518
conditional analysis
#36 opened Oct 27, 2021 by FEIFEI502
Docker image for QTLtools v.1.3.1
#35 opened Aug 24, 2021 by NaotoKubota
1
Interaction effects
#32 opened Mar 9, 2021 by llandsmeer
QTLtools quan fails with "ERROR: unmatched attributes" when using Ensembl GTF
#31 opened Mar 3, 2021 by VitorAguiar
NAs nominal p-values
#29 opened Dec 7, 2020 by gujjas
Checking that the beta approximated P-values are okay
#28 opened Dec 4, 2020 by gujjas
1
Low correlation for small pvalues
#18 opened Jan 3, 2019 by yizhenzhong
Consistency between modes when 0 local variants
#7 opened Dec 24, 2017 by letaylor
ProTip! Exclude everything labeled bug with -label:bug.
0