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A widget to visualize and edit atomic structures in Jupyter Notebook

Python 32 3 Updated Feb 28, 2025

Python module for drawing and rendering beautiful atoms and molecules using Blender.

Python 159 27 Updated Jan 25, 2025

Converts an xyz file to an RDKit mol object

Python 269 70 Updated Jan 22, 2025

pyscf-forge is a staging ground for code that may be suitable for pyscf-core

Python 36 32 Updated May 14, 2025

Supporting data for publications

Python 1 Updated Apr 28, 2025

Learning the Kohn-Sham charge density. Code and data for "Towards Combinatorial Generalization for Catalysts: A Kohn-Sham Charge-Density Approach" (NeurIPS 2023)

Python 4 Updated Jun 20, 2024

Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural networks, FIORA models bond cleavages, fragment intensities, …

Jupyter Notebook 31 5 Updated Apr 29, 2025

Uncertainty-Controlled Genetic Algorithm

Python 2 1 Updated Jul 3, 2024

Wavelet scattering regression of quantum chemical energies for planar molecules

MATLAB 8 3 Updated Oct 21, 2016

AiiDA plugin for the Python-based Simulations of Chemistry Framework (PySCF)

Python 21 6 Updated Nov 29, 2024

tmQM dataset files

q 53 7 Updated Mar 17, 2025

Code for "Applying Large Graph Neural Networks to Predict Transition Metal Complex Energies Using the tmQM_wB97MV Dataset"

Jupyter Notebook 7 1 Updated Apr 9, 2024

A Docker image for camelot-dev/excalibur

Dockerfile 36 9 Updated Jul 11, 2024

A python wrapper for https://www.chemie.uni-bonn.de/pctc/mulliken-center/software/dft-d3/get-the-current-version-of-dft-d3

Fortran 9 2 Updated Jan 15, 2019

Official code for the paper "Compositional Generalization from First Principles" (NeurIPS 2023)

Jupyter Notebook 11 4 Updated Jul 25, 2023

A template for University of Maryland dissertations

TeX 27 5 Updated Sep 10, 2023

extract slides from videos

C 62 15 Updated May 6, 2023

Tricubic and quadcubic spline interpolation for 3D and 4D vector and scalar fields

Python 40 10 Updated Apr 24, 2024

Splitting Conic Solver

C 570 138 Updated Apr 15, 2025

Clarabel.rs: Interior-point solver for convex conic optimisation problems in Rust.

Rust 433 33 Updated May 14, 2025

Codes related to answers on StackExchange Network.

MATLAB 117 43 Updated May 9, 2025
Python 6 2 Updated Jun 8, 2021

Fast approximate discrete Radon transform for NumPy arrays

Python 8 1 Updated Dec 9, 2024

Code to reproduce the results from the thesis: "Compressed Sensing - Theoretical Foundations & Application in Magnetic Resonance Imaging"

Python 6 1 Updated Mar 4, 2024

Advanced tool for Wannier interpolation and integration of k-space integrals

Python 100 57 Updated May 14, 2025

Matlab MEX gateway generator

C++ 11 8 Updated May 5, 2025

A geometry library written in Python

Python 107 14 Updated May 10, 2025

Fast Sinc Transform Library

C++ 5 4 Updated Dec 22, 2021

Fast sinc interpolation and transform implementation in Python (based on https://github.com/hannahlawrence/sinctransform)

Python 5 2 Updated Dec 18, 2024

Lightweight non-uniform Fast Fourier Transform in Python

Jupyter Notebook 207 29 Updated Nov 10, 2022
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